View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10070_low_57 (Length: 261)
Name: NF10070_low_57
Description: NF10070
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10070_low_57 |
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Alignment Details
Target: chr7 (Bit Score: 242; Significance: 1e-134; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 38037541 - 38037786
Alignment:
| Q |
1 |
aagcttatcttctacattagtgtcagattttcaacaattaatggaattgattttttctcattagggccaattttgcaagagtcgcgtccctcctccttat |
100 |
Q |
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| T |
38037541 |
aagcttatcttctacattagtgtcagaatttcaacaattaatggaattgattttttctcattagggccaattttgcaagagtcgcgtccctcctccttat |
38037640 |
T |
|
| Q |
101 |
ttgctttcttttttattcgaattaggttttgtgttggaatacctcttgtatttctttctcaatttaaaacttgtgtgtttaaaacaaacaaaaaatcatc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38037641 |
ttgctttcttttttattcgaattaggttttgtgttggaatacctcttgtatttctttctcaatttaaaacttgtgtgtttaaaacaaacaaaaaatcatc |
38037740 |
T |
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| Q |
201 |
tctctggttttattttgaaacagcaaagaagatcccaagaggaagg |
246 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38037741 |
tctctggttttattttgaaacagcaaagaagatcccaagaggaagg |
38037786 |
T |
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