View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10070_low_74 (Length: 239)
Name: NF10070_low_74
Description: NF10070
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10070_low_74 |
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Alignment Details
Target: chr8 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 10312666 - 10312894
Alignment:
| Q |
1 |
ttatagccttggagttcttctttttgaggtcagcaaatttttaacacatttttattactttcataaacctttatcctgcataatttcctctcgata---- |
96 |
Q |
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| T |
10312666 |
ttatagccttggagttcttctttttgaggtcagcaaatttttaacacatttttattactttcataaacctttatcctgcataatttcctctcgatatata |
10312765 |
T |
|
| Q |
97 |
gccaaaaatattttgttaagtttcactaattaaaataaccacagggctgttatgcacaatttaatctaaccttaggaaatgaaattgatacatatatgtt |
196 |
Q |
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||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10312766 |
gccaaaa-tattttgttaagtttcactaattaaaataaccacagggctgttatgcacaatttaatctaaccttaggaaatgaaattgatacatatatgtt |
10312864 |
T |
|
| Q |
197 |
ttgacttacaagttttattccaacttcttg |
226 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
10312865 |
ttgacttacaagttttattccaacttcttg |
10312894 |
T |
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