View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10071_high_1 (Length: 614)

Name: NF10071_high_1
Description: NF10071
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10071_high_1
NF10071_high_1
[»] chr1 (31 HSPs)
chr1 (101-596)||(28663700-28664193)
chr1 (159-592)||(28636186-28636619)
chr1 (164-592)||(28606406-28606834)
chr1 (161-592)||(28656682-28657113)
chr1 (23-99)||(13011223-13011299)
chr1 (30-101)||(1815240-1815310)
chr1 (15-76)||(10577766-10577826)
chr1 (28-97)||(18556466-18556534)
chr1 (28-101)||(38078667-38078739)
chr1 (28-101)||(46348389-46348461)
chr1 (29-101)||(22515893-22515964)
chr1 (22-100)||(14359529-14359605)
chr1 (22-101)||(48450593-48450671)
chr1 (15-81)||(398791-398856)
chr1 (23-101)||(42359455-42359532)
chr1 (15-100)||(5927347-5927431)
chr1 (14-51)||(9630635-9630672)
chr1 (39-99)||(113291-113350)
chr1 (33-101)||(22881622-22881689)
chr1 (22-81)||(2896147-2896205)
chr1 (66-105)||(26830606-26830645)
chr1 (15-97)||(40917719-40917798)
chr1 (18-101)||(47989469-47989550)
chr1 (16-101)||(28663573-28663661)
chr1 (15-101)||(48040467-48040553)
chr1 (39-101)||(51410016-51410078)
chr1 (28-101)||(1486715-1486787)
chr1 (16-101)||(6612177-6612261)
chr1 (22-101)||(5944256-5944336)
chr1 (33-101)||(24577192-24577259)
chr1 (39-99)||(32461471-32461530)
[»] chr6 (25 HSPs)
chr6 (22-101)||(426520-426598)
chr6 (15-101)||(3209350-3209435)
chr6 (15-101)||(16766665-16766750)
chr6 (15-101)||(8365525-8365610)
chr6 (15-101)||(9107376-9107461)
chr6 (22-100)||(12696299-12696376)
chr6 (28-98)||(17841598-17841667)
chr6 (39-101)||(32978905-32978967)
chr6 (15-101)||(34595102-34595187)
chr6 (28-100)||(17302537-17302609)
chr6 (22-101)||(33001295-33001373)
chr6 (15-101)||(853865-853950)
chr6 (15-101)||(7938084-7938169)
chr6 (28-101)||(28152080-28152151)
chr6 (22-99)||(8776981-8777057)
chr6 (22-101)||(7977836-7977914)
chr6 (22-101)||(10770680-10770758)
chr6 (22-101)||(15489738-15489816)
chr6 (22-101)||(16833283-16833361)
chr6 (39-101)||(4877934-4877996)
chr6 (66-99)||(4118341-4118374)
chr6 (20-81)||(9658852-9658912)
chr6 (15-76)||(18367805-18367864)
chr6 (28-101)||(31959140-31959212)
chr6 (23-63)||(3398595-3398635)
[»] chr8 (16 HSPs)
chr8 (15-101)||(22651944-22652029)
chr8 (15-101)||(29510310-29510395)
chr8 (22-101)||(20873044-20873122)
chr8 (40-101)||(4298892-4298952)
chr8 (33-101)||(18407705-18407772)
chr8 (22-101)||(2572062-2572140)
chr8 (30-101)||(15816135-15816205)
chr8 (39-101)||(24613513-24613573)
chr8 (31-98)||(30271300-30271366)
chr8 (28-99)||(36450762-36450832)
chr8 (22-100)||(8343291-8343368)
chr8 (15-81)||(13436990-13437055)
chr8 (34-104)||(41831943-41832012)
chr8 (15-100)||(22197749-22197833)
chr8 (34-99)||(22595981-22596045)
chr8 (21-81)||(41838149-41838208)
[»] chr2 (20 HSPs)
chr2 (28-101)||(37558958-37559030)
chr2 (15-101)||(19536403-19536489)
chr2 (28-101)||(6940236-6940308)
chr2 (23-101)||(21624242-21624320)
chr2 (32-101)||(11223869-11223937)
chr2 (28-101)||(14996229-14996302)
chr2 (22-101)||(20539680-20539758)
chr2 (19-81)||(34785008-34785069)
chr2 (15-76)||(18054834-18054895)
chr2 (20-81)||(20242753-20242813)
chr2 (28-81)||(24894370-24894422)
chr2 (28-101)||(30404856-30404928)
chr2 (28-100)||(21374706-21374777)
chr2 (15-101)||(2438725-2438808)
chr2 (14-101)||(15972840-15972926)
chr2 (22-101)||(18841019-18841097)
chr2 (28-101)||(18421944-18422016)
chr2 (32-81)||(27460011-27460060)
chr2 (28-101)||(30717536-30717608)
chr2 (17-101)||(15657834-15657917)
[»] chr5 (22 HSPs)
chr5 (15-101)||(21191062-21191147)
chr5 (28-101)||(14674250-14674322)
chr5 (17-101)||(21522720-21522803)
chr5 (17-101)||(21533286-21533369)
chr5 (33-101)||(31084309-31084376)
chr5 (15-101)||(6247590-6247675)
chr5 (15-101)||(19579669-19579754)
chr5 (30-100)||(39698524-39698593)
chr5 (23-83)||(19552567-19552626)
chr5 (15-63)||(22013382-22013430)
chr5 (15-101)||(15382445-15382532)
chr5 (42-101)||(15883982-15884041)
chr5 (22-101)||(30135288-30135367)
chr5 (39-101)||(8420019-8420080)
chr5 (15-101)||(13287405-13287490)
chr5 (39-101)||(33178017-33178078)
chr5 (47-100)||(17088284-17088337)
chr5 (28-101)||(21576751-21576823)
chr5 (14-63)||(36642805-36642854)
chr5 (32-101)||(42893345-42893413)
chr5 (15-63)||(15410491-15410539)
chr5 (17-101)||(24906307-24906390)
[»] scaffold0223 (1 HSPs)
scaffold0223 (15-100)||(20140-20224)
[»] chr7 (11 HSPs)
chr7 (16-81)||(18213059-18213124)
chr7 (15-101)||(24339610-24339695)
chr7 (22-99)||(25481877-25481953)
chr7 (22-102)||(13770666-13770745)
chr7 (28-101)||(11061082-11061154)
chr7 (34-101)||(7438693-7438759)
chr7 (22-101)||(24105653-24105731)
chr7 (39-101)||(7197303-7197364)
chr7 (15-81)||(26733272-26733337)
chr7 (15-101)||(27945009-27945094)
chr7 (22-101)||(21864781-21864861)
[»] chr4 (19 HSPs)
chr4 (15-100)||(28084489-28084574)
chr4 (28-101)||(30298927-30299000)
chr4 (28-101)||(30327795-30327868)
chr4 (15-101)||(23292992-23293077)
chr4 (15-76)||(5414203-5414263)
chr4 (22-101)||(49431000-49431079)
chr4 (15-101)||(12708114-12708200)
chr4 (15-101)||(35157991-35158076)
chr4 (28-101)||(12895122-12895193)
chr4 (14-99)||(19482635-19482719)
chr4 (15-105)||(20633453-20633539)
chr4 (28-101)||(31800484-31800556)
chr4 (15-99)||(27706185-27706268)
chr4 (40-99)||(715615-715674)
chr4 (40-99)||(752941-753000)
chr4 (22-100)||(3947773-3947850)
chr4 (15-101)||(21945471-21945556)
chr4 (21-81)||(11651160-11651219)
chr4 (33-98)||(50280867-50280933)
[»] scaffold0103 (1 HSPs)
scaffold0103 (28-99)||(51792-51862)
[»] chr3 (22 HSPs)
chr3 (30-101)||(27505229-27505299)
chr3 (15-101)||(8587027-8587112)
chr3 (15-101)||(28917969-28918054)
chr3 (33-96)||(14747547-14747610)
chr3 (15-105)||(35994740-35994828)
chr3 (15-101)||(55401043-55401128)
chr3 (34-99)||(4987299-4987363)
chr3 (39-100)||(14209105-14209165)
chr3 (32-100)||(10268493-10268560)
chr3 (20-100)||(14216865-14216944)
chr3 (20-100)||(14222994-14223073)
chr3 (33-101)||(35222924-35222991)
chr3 (15-101)||(14829658-14829742)
chr3 (29-100)||(14832081-14832151)
chr3 (15-101)||(10335292-10335377)
chr3 (15-101)||(15796300-15796385)
chr3 (39-101)||(26508102-26508163)
chr3 (28-101)||(10954933-10955005)
chr3 (15-100)||(11610489-11610573)
chr3 (40-92)||(21305238-21305290)
chr3 (33-101)||(21479104-21479171)
chr3 (33-81)||(40052318-40052365)
[»] scaffold0053 (1 HSPs)
scaffold0053 (15-101)||(8766-8851)
[»] scaffold0021 (1 HSPs)
scaffold0021 (15-101)||(130450-130535)
[»] scaffold0018 (1 HSPs)
scaffold0018 (15-100)||(178825-178910)
[»] scaffold0003 (1 HSPs)
scaffold0003 (15-81)||(241562-241627)
[»] scaffold0007 (1 HSPs)
scaffold0007 (15-104)||(225271-225359)
[»] scaffold0793 (1 HSPs)
scaffold0793 (40-99)||(4891-4950)
[»] scaffold0116 (1 HSPs)
scaffold0116 (15-74)||(9866-9924)
[»] scaffold0083 (1 HSPs)
scaffold0083 (22-101)||(45536-45615)
[»] scaffold0027 (1 HSPs)
scaffold0027 (22-101)||(46657-46735)
[»] scaffold0066 (1 HSPs)
scaffold0066 (36-105)||(33366-33433)
[»] scaffold0652 (1 HSPs)
scaffold0652 (29-101)||(468-539)


Alignment Details
Target: chr1 (Bit Score: 421; Significance: 0; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 421; E-Value: 0
Query Start/End: Original strand, 101 - 596
Target Start/End: Original strand, 28663700 - 28664193
Alignment:
Q  101 gtgtccgtgcttcatatacattatataacatttacttcaaaagtcaaacataaacataattaattggtcactttgattcaatcaggaggacactcagtgg 200  Q
    ||||| |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28663700 gtgtctgtgcttcatatacattata--acatttacttcaaaagtcaaacataaacataattaattggtcactttgattcaatcaggaggacactcagtgg 28663797  T
Q  201 gaagagtacattgcatgaatttggtccacagactataccccacagtggacccaaagctagaccccacatatgttgcctacttaaaacttagatgcccaac 300  Q
    |||||||||||||||||||| ||||||| |||||||||||||| |||||||||||||||||||||||||||| ||||||  |||||||||||||||||||    
T  28663798 gaagagtacattgcatgaatatggtccatagactataccccacggtggacccaaagctagaccccacatatgctgcctatctaaaacttagatgcccaac 28663897  T
Q  301 accaaatccagatccaaatgctgttttatatgcaagaaatgatagaaaaacaccaatgataattgacaacaactactacaagaacattttgcaacataag 400  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  28663898 accaaatccagatccaaatgctgttctatatgcaagaaatgatagaaaaacaccaatgataattgacaacaactactacaaaaacatcttgcaacataag 28663997  T
Q  401 ggtcttctaactgtggatgaagaactagccactgatccaagaacatcaccttatgtgaaaaagatggcagctgataatggatacttcaatgaacaattct 500  Q
    ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  28663998 ggtcttctaacagtggatgaagaactagctactgatccaagaacatcaccttatgtgaaaaaaatggcagctgataatggatacttcaatgaacaattct 28664097  T
Q  501 caagggctgttcaattgttatcagagaataatcctcttactggagatcaaggtgaaattcgaaaggattgtcgttacgttaatgtcaattagttat 596  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  28664098 caagggctgttcaattgttatcggagaataatcctcttaccggagatcaaggtgaaattcgaaaggattgtcgttacgttaatgccaattagttat 28664193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 302; E-Value: 1e-169
Query Start/End: Original strand, 159 - 592
Target Start/End: Original strand, 28636186 - 28636619
Alignment:
Q  159 attaattggtcactttgattcaatcaggaggacactcagtgggaagagtacattgcatgaatttggtccacagactataccccacagtggacccaaagct 258  Q
    ||||| |||||||||||||| ||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| | |    
T  28636186 attaactggtcactttgattaaatcaggagcacactcagttggaagagtacattgcatgaatttggtccacagactataccccacagtggatccaacgtt 28636285  T
Q  259 agaccccacatatgttgcctacttaaaacttagatgcccaacaccaaatccagatccaaatgctgttttatatgcaagaaatgatagaaaaacaccaatg 358  Q
    ||| || ||| ||| | ||||| |||||| ||| |||||||||||||||||||||||||| |||||   |||||  || ||||||  |||||||||||||    
T  28636286 agatcctacacatgctacctacctaaaacgtaggtgcccaacaccaaatccagatccaaaagctgtccaatatgtgaggaatgatctaaaaacaccaatg 28636385  T
Q  359 ataattgacaacaactactacaagaacattttgcaacataagggtcttctaactgtggatgaagaactagccactgatccaagaacatcaccttatgtga 458  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  28636386 ataattgacaacaactactacaaaaacatcttgcaacataagggtcttctaactgtggatgaagaattagccactgatccaagaacatcaccttatgtga 28636485  T
Q  459 aaaagatggcagctgataatggatacttcaatgaacaattctcaagggctgttcaattgttatcagagaataatcctcttactggagatcaaggtgaaat 558  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  28636486 aaaaaatggcagctgataatggatacttcaatgaacaattctcaagggctgttcaattgttatcagagaataatcctcttattggagatcaaggtgaaat 28636585  T
Q  559 tcgaaaggattgtcgttacgttaatgtcaattag 592  Q
      ||||||||||||| |||||||||| |||||||    
T  28636586 cagaaaggattgtcgatacgttaatgccaattag 28636619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 301; E-Value: 1e-169
Query Start/End: Original strand, 164 - 592
Target Start/End: Original strand, 28606406 - 28606834
Alignment:
Q  164 ttggtcactttgattcaatcaggaggacactcagtgggaagagtacattgcatgaatttggtccacagactataccccacagtggacccaaagctagacc 263  Q
    ||||||||||||||||||| ||||| |||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| |||| | |||| |    
T  28606406 ttggtcactttgattcaattaggagcacactcggttggaagagtacattgcatgaatttggtccacagactataccccacagtggatccaacgttagatc 28606505  T
Q  264 ccacatatgttgcctacttaaaacttagatgcccaacaccaaatccagatccaaatgctgttttatatgcaagaaatgatagaaaaacaccaatgataat 363  Q
    | ||| ||| ||||||| |||||| ||| |||||||||||||||||||||||||| |||||   |||||  || ||||||  ||||||||||||||||||    
T  28606506 ctacacatgctgcctacctaaaacgtaggtgcccaacaccaaatccagatccaaaagctgtccaatatgtgaggaatgatctaaaaacaccaatgataat 28606605  T
Q  364 tgacaacaactactacaagaacattttgcaacataagggtcttctaactgtggatgaagaactagccactgatccaagaacatcaccttatgtgaaaaag 463  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||     
T  28606606 tgacaacaactactacaaaaacatcttgcaacataagggtcttctaacagtggatgaagaactagctactgatccaagaacatcaccttatgtgaaaaaa 28606705  T
Q  464 atggcagctgataatggatacttcaatgaacaattctcaagggctgttcaattgttatcagagaataatcctcttactggagatcaaggtgaaattcgaa 563  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||    
T  28606706 atggcagctgataatggatacttcaatgaacaattctcaagggctgttcaattgttatcagagaataatcctcttattggagatcaaggtgaaattagaa 28606805  T
Q  564 aggattgtcgttacgttaatgtcaattag 592  Q
    ||||||| ||||||||||||| |||||||    
T  28606806 aggattgccgttacgttaatgccaattag 28606834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 161 - 592
Target Start/End: Original strand, 28656682 - 28657113
Alignment:
Q  161 taattggtcactttgattcaatcaggaggacactcagtgggaagagtacattgcatgaatttggtccacagactataccccacagtggacccaaagctag 260  Q
    |||||||||||| ||||| ||||||||| ||| ||||||||||||||||| ||||| ||| ||||||||||||||||||| | ||||||||||| |||||    
T  28656682 taattggtcactatgattgaatcaggagcacattcagtgggaagagtacactgcataaatatggtccacagactataccctatagtggacccaacgctag 28656781  T
Q  261 accccacatatgttgcctacttaaaacttagatgcccaacaccaaatccagatccaaatgctgttttatatgcaagaaatgatagaaaaacaccaatgat 360  Q
    |||| |||||||||| |||| |||||| |||||| |||| |||||| ||| |  |||| |||||   ||||| ||| ||||||  |||||| ||| ||||    
T  28656782 accctacatatgttgtctacctaaaacgtagatgtccaaaaccaaacccaaaggcaaaagctgtccaatatgtaaggaatgatctaaaaactccattgat 28656881  T
Q  361 aattgacaacaactactacaagaacattttgcaacataagggtcttctaactgtggatgaagaactagccactgatccaagaacatcaccttatgtgaaa 460  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||  ||    
T  28656882 aattgacaacaactactacaagaacattttgcaacataagggtcttctaactgtggatgaagaactagccactgacccaataacatcaccttatgtacaa 28656981  T
Q  461 aagatggcagctgataatggatacttcaatgaacaattctcaagggctgttcaattgttatcagagaataatcctcttactggagatcaaggtgaaattc 560  Q
    || ||||||| ||||||||| ||||||||||| |||||||||||||||||||  ||||||||||||||||||||||||| ||||||||||||||||||      
T  28656982 aaaatggcagatgataatggttacttcaatgaccaattctcaagggctgttcttttgttatcagagaataatcctcttattggagatcaaggtgaaatca 28657081  T
Q  561 gaaaggattgtcgttacgttaatgtcaattag 592  Q
    ||||||||||||| | |||||||| |||||||    
T  28657082 gaaaggattgtcgcttcgttaatgccaattag 28657113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 23 - 99
Target Start/End: Complemental strand, 13011299 - 13011223
Alignment:
Q  23 acacaacacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgt 99  Q
    |||| ||||| |||| |||| ||||||||||||||| ||||  |||||||||||||||||| ||| |||||||||||    
T  13011299 acacgacacgaacactgacatgccgacacagctaataatttgaaaaaaatcacataattaagtgtaattacaagtgt 13011223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 1815240 - 1815310
Alignment:
Q  30 acggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 101  Q
    |||||||| ||||||||||||||  |||||||||| |||||||||||||||| | ||| |||||||||||||    
T  1815240 acggacactgacacgccgacacaaataattatttt-aaaaaatcacataattcagtgtaattacaagtgtcg 1815310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 15 - 76
Target Start/End: Complemental strand, 10577826 - 10577766
Alignment:
Q  15 gacaccagacacaacacggacacagacacgccgacacagctaattatttttaaaaaatcaca 76  Q
    |||||| ||||| |||||||||| ||||||||||||||||||||| |||||| |||||||||    
T  10577826 gacaccggacacgacacggacaccgacacgccgacacagctaatt-tttttagaaaatcaca 10577766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 28 - 97
Target Start/End: Complemental strand, 18556534 - 18556466
Alignment:
Q  28 acacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagt 97  Q
    |||||||||| ||||||||||||||||||| || ||| |||| ||||||||||| ||||| |||||||||    
T  18556534 acacggacactgacacgccgacacagctaa-taatttgaaaatatcacataatttaatgtaattacaagt 18556466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 28 - 101
Target Start/End: Complemental strand, 38078739 - 38078667
Alignment:
Q  28 acacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 101  Q
    ||||| |||| |||||| ||||||||||||| ||||  |||||||||||||||| ||||| |||||||||||||    
T  38078739 acacgaacactgacacgtcgacacagctaataatttg-aaaaaatcacataattcaatgtaattacaagtgtcg 38078667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 28 - 101
Target Start/End: Complemental strand, 46348461 - 46348389
Alignment:
Q  28 acacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 101  Q
    |||||||||| ||||||||||||||||||| || ||| ||||||||| |||||| | ||| |||||||||||||    
T  46348461 acacggacactgacacgccgacacagctaa-taatttgaaaaaatcatataatttagtgtaattacaagtgtcg 46348389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 29 - 101
Target Start/End: Complemental strand, 22515964 - 22515893
Alignment:
Q  29 cacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 101  Q
    ||||||||| ||||||| |||||||||||| ||||  |||||||||||||||| | ||| |||||||||||||    
T  22515964 cacggacacggacacgcagacacagctaataatttg-aaaaaatcacataatttagtgtaattacaagtgtcg 22515893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 22 - 100
Target Start/End: Complemental strand, 14359605 - 14359529
Alignment:
Q  22 gacacaacacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtc 100  Q
    ||||| |||| ||||| |||||||||||||||||||| |  ||| ||||||||||||||| | ||| ||||||||||||    
T  14359605 gacacgacacagacacggacacgccgacacagctaataa--tttgaaaaatcacataatttagtgtaattacaagtgtc 14359529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 22 - 101
Target Start/End: Complemental strand, 48450671 - 48450593
Alignment:
Q  22 gacacaacacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 101  Q
    ||||| |||||||||| |||||||| |||||||||| || ||| ||||||| |||||||| | ||| |||||||||||||    
T  48450671 gacacgacacggacactgacacgccaacacagctaa-taatttgaaaaaataacataatttagtgtaattacaagtgtcg 48450593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 81
Target Start/End: Complemental strand, 398856 - 398791
Alignment:
Q  15 gacaccagacacaacacggacacagacacgccgacacagctaattatttttaaaaaatcacataatt 81  Q
    |||||| ||||| |||||||||| ||||||||||||| ||||| || ||| ||||||||||||||||    
T  398856 gacaccggacacgacacggacactgacacgccgacaccgctaa-taatttgaaaaaatcacataatt 398791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 23 - 101
Target Start/End: Complemental strand, 42359532 - 42359455
Alignment:
Q  23 acacaacacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 101  Q
    ||||||||||||||| ||||||| |||||| |||| || ||| ||||||||||| |||| | ||| |||||||||||||    
T  42359532 acacaacacggacactgacacgctgacacatctaa-taatttgaaaaaatcacaaaattcagtgtaattacaagtgtcg 42359455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 15 - 100
Target Start/End: Complemental strand, 5927431 - 5927347
Alignment:
Q  15 gacaccagacacaacacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtc 100  Q
    |||||| ||||| |||||||||| |||||||  |||| |||||| ||||  ||||||||| |||||| ||||| ||||||||||||    
T  5927431 gacaccggacacgacacggacactgacacgctaacactgctaataatttg-aaaaaatcatataatttaatgtaattacaagtgtc 5927347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 14 - 51
Target Start/End: Complemental strand, 9630672 - 9630635
Alignment:
Q  14 agacaccagacacaacacggacacagacacgccgacac 51  Q
    |||||||||||||||||||||||| |||||||||||||    
T  9630672 agacaccagacacaacacggacactgacacgccgacac 9630635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 39 - 99
Target Start/End: Original strand, 113291 - 113350
Alignment:
Q  39 gacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgt 99  Q
    |||||||||||||||||||| ||||  |||||||||||||||| | ||| |||||||||||    
T  113291 gacacgccgacacagctaataatttg-aaaaaatcacataattcagtgtaattacaagtgt 113350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 33 - 101
Target Start/End: Complemental strand, 22881689 - 22881622
Alignment:
Q  33 gacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 101  Q
    ||||| |||||||||||||| ||||| ||||  |||||||||||||||| | ||| |||||||||||||    
T  22881689 gacactgacacgccgacacaactaataatttg-aaaaaatcacataatttagtgtaattacaagtgtcg 22881622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 22 - 81
Target Start/End: Complemental strand, 2896205 - 2896147
Alignment:
Q  22 gacacaacacggacacagacacgccgacacagctaattatttttaaaaaatcacataatt 81  Q
    |||||||||||||||| ||||||||||||| ||||| || ||| | ||||||||||||||    
T  2896205 gacacaacacggacactgacacgccgacaccgctaa-taatttgagaaaatcacataatt 2896147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 66 - 105
Target Start/End: Original strand, 26830606 - 26830645
Alignment:
Q  66 aaaaaatcacataattaaatgtgattacaagtgtcgtgtc 105  Q
    |||||||||||||||||||||| |||| ||||||||||||    
T  26830606 aaaaaatcacataattaaatgtaattataagtgtcgtgtc 26830645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 97
Target Start/End: Original strand, 40917719 - 40917798
Alignment:
Q  15 gacaccagacacaacacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagt 97  Q
    |||||| ||||| ||||||| || ||||||||||||||||||| || ||| ||||||||||  |||||| ||| |||||||||    
T  40917719 gacaccggacacgacacggatactgacacgccgacacagctaa-taatttgaaaaaatcac--aattaagtgtaattacaagt 40917798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 47989469 - 47989550
Alignment:
Q  18 accagacacaacacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 101  Q
    ||||||||| |||| ||||| ||||||||||||||  |||| ||||  |||||||||||||||| | ||| |||||||||||||    
T  47989469 accagacacgacacagacactgacacgccgacacaa-taataattta-aaaaaatcacataattcagtgtaattacaagtgtcg 47989550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 16 - 101
Target Start/End: Original strand, 28663573 - 28663661
Alignment:
Q  16 acaccagacacaacacggacacagacacgccgacacagctaattattt---ttaaaaaatcacataattaaatgtgattacaagtgtcg 101  Q
    ||||||||||| ||||||||||||||| ||||||||| |  || ||||     ||||||||||||||||  |||| |||||||||||||    
T  28663573 acaccagacaccacacggacacagacatgccgacacaaccgataatttaaaaaaaaaaatcacataattctatgtaattacaagtgtcg 28663661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 15 - 101
Target Start/End: Complemental strand, 48040553 - 48040467
Alignment:
Q  15 gacaccagacacaacacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 101  Q
    |||||| ||||| |||||||||| ||||||||||||||| |||| ||||  ||||  ||||||| || | ||| | |||||||||||    
T  48040553 gacaccggacacgacacggacactgacacgccgacacagataataatttgaaaaaggtcacatattttagtgtaaatacaagtgtcg 48040467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 39 - 101
Target Start/End: Original strand, 51410016 - 51410078
Alignment:
Q  39 gacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 101  Q
    |||| ||||||||| ||||| ||||  |||||||||||||||| | ||| |||||||||||||    
T  51410016 gacatgccgacacatctaataatttgaaaaaaatcacataattcagtgtaattacaagtgtcg 51410078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 101
Target Start/End: Complemental strand, 1486787 - 1486715
Alignment:
Q  28 acacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 101  Q
    ||||||| || ||||||| |||||||||||| ||||  |||||||||||||||| | ||| |||| ||||||||    
T  1486787 acacggatactgacacgctgacacagctaataatttg-aaaaaatcacataattcagtgtaattataagtgtcg 1486715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 101
Target Start/End: Complemental strand, 6612261 - 6612177
Alignment:
Q  16 acaccagacacaacacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 101  Q
    ||||| ||||| |||||||||  |||||||||| |||| |||| ||||  ||||||| |||||||| | ||| |||||||||||||    
T  6612261 acaccggacacgacacggacaatgacacgccgatacagttaataatttg-aaaaaattacataattcagtgtaattacaagtgtcg 6612177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 22 - 101
Target Start/End: Original strand, 5944256 - 5944336
Alignment:
Q  22 gacacaacacggacacagacacgccgacacagctaattatttttaaaa-aatcacataattaaatgtgattacaagtgtcg 101  Q
    ||||| |||| ||||| ||||||||| |||||||||| ||||  |||| |||||||||||| | ||| |||| ||||||||    
T  5944256 gacacgacacagacactgacacgccgccacagctaataatttgaaaaaaaatcacataattcagtgtaattataagtgtcg 5944336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 33 - 101
Target Start/End: Complemental strand, 24577259 - 24577192
Alignment:
Q  33 gacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 101  Q
    ||||| ||||||| |||||| ||||| ||||  |||||||||||||||| | ||| |||||||||||||    
T  24577259 gacacggacacgctgacacaactaataatttg-aaaaaatcacataattcagtgtaattacaagtgtcg 24577192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 39 - 99
Target Start/End: Complemental strand, 32461530 - 32461471
Alignment:
Q  39 gacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgt 99  Q
    ||||||||| |||| ||||| ||||  |||||||||||||||| ||||| |||||||||||    
T  32461530 gacacgccggcacaactaataatttg-aaaaaatcacataatttaatgtaattacaagtgt 32461471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 4e-18; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 22 - 101
Target Start/End: Complemental strand, 426598 - 426520
Alignment:
Q  22 gacacaacacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 101  Q
    ||||| |||||||||| ||||||||||||||| |||| ||||  |||||||||||||||||||||| |||||||||||||    
T  426598 gacacgacacggacactgacacgccgacacagttaataatttg-aaaaaatcacataattaaatgtaattacaagtgtcg 426520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 15 - 101
Target Start/End: Original strand, 3209350 - 3209435
Alignment:
Q  15 gacaccagacacaacacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 101  Q
    |||||| ||||| ||||| ||||||||||||||||||||||||| ||||  |||||||||||||||| | ||| |||||||||||||    
T  3209350 gacaccggacacgacacg-acacagacacgccgacacagctaataatttgaaaaaaatcacataatttagtgttattacaagtgtcg 3209435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 15 - 101
Target Start/End: Original strand, 16766665 - 16766750
Alignment:
Q  15 gacaccagacacaacacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 101  Q
    |||||| ||||| ||| |||||| ||||||||||||||||||| || ||| |||||||||||||||| | ||| |||||||||||||    
T  16766665 gacaccggacacgacatggacactgacacgccgacacagctaa-taatttgaaaaaatcacataattcagtgtaattacaagtgtcg 16766750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 15 - 101
Target Start/End: Complemental strand, 8365610 - 8365525
Alignment:
Q  15 gacaccagacacaacacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 101  Q
    |||||||||||| |||||||||| |||||||||||||| |||| || ||| |||| |||||||||||   ||| |||||||||||||    
T  8365610 gacaccagacacgacacggacactgacacgccgacacaactaa-taatttgaaaatatcacataattcggtgtaattacaagtgtcg 8365525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 15 - 101
Target Start/End: Complemental strand, 9107461 - 9107376
Alignment:
Q  15 gacaccagacacaacacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 101  Q
    |||||| ||||| ||||||||||  |||||||||||||||||| || ||| ||||||||||| |||| | ||| |||||||||||||    
T  9107461 gacaccggacacgacacggacactaacacgccgacacagctaa-taatttgaaaaaatcacaaaattcagtgtaattacaagtgtcg 9107376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 22 - 100
Target Start/End: Original strand, 12696299 - 12696376
Alignment:
Q  22 gacacaacacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtc 100  Q
    ||||| |||||||||| ||||||||||||||||||| || ||| ||||||| |||||||| | ||| ||||||||||||    
T  12696299 gacacgacacggacactgacacgccgacacagctaa-taatttgaaaaaattacataattcagtgtaattacaagtgtc 12696376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 28 - 98
Target Start/End: Complemental strand, 17841667 - 17841598
Alignment:
Q  28 acacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtg 98  Q
    |||||||||| ||||||||||||||||||| || ||| |||||||||||||||| | ||| ||||||||||    
T  17841667 acacggacactgacacgccgacacagctaa-taatttgaaaaaatcacataatttagtgtaattacaagtg 17841598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 39 - 101
Target Start/End: Complemental strand, 32978967 - 32978905
Alignment:
Q  39 gacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 101  Q
    |||||||||||||||||||| ||||  |||||| ||||||||||| ||| |||||||||||||    
T  32978967 gacacgccgacacagctaataatttgaaaaaaaacacataattaagtgtaattacaagtgtcg 32978905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 15 - 101
Target Start/End: Original strand, 34595102 - 34595187
Alignment:
Q  15 gacaccagacacaacacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 101  Q
    |||||| ||||| |||||||||  |||||||||||||| |||| || ||| |||||||||||||||| | ||| |||||||||||||    
T  34595102 gacaccggacacgacacggacaatgacacgccgacacaactaa-taatttgaaaaaatcacataattcagtgtaattacaagtgtcg 34595187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 28 - 100
Target Start/End: Original strand, 17302537 - 17302609
Alignment:
Q  28 acacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtc 100  Q
    ||||| |||| ||||||| |||||| ||||| ||||  |||||||||||||||| ||||| ||||||||||||    
T  17302537 acacgaacactgacacgctgacacaactaataatttgaaaaaaatcacataattcaatgtaattacaagtgtc 17302609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 22 - 101
Target Start/End: Complemental strand, 33001373 - 33001295
Alignment:
Q  22 gacacaacacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 101  Q
    |||||||||||| ||  ||||||||||||| |||||| ||||  |||||||||||||||||||||| |||| | ||||||    
T  33001373 gacacaacacggtcaatgacacgccgacactgctaataatttg-aaaaaatcacataattaaatgtaattatatgtgtcg 33001295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 101
Target Start/End: Complemental strand, 853950 - 853865
Alignment:
Q  15 gacaccagacacaacacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 101  Q
    |||||| ||||| |||||||  | |||||||||||||| ||||| ||||  |||||||||||||||||| ||  |||||||||||||    
T  853950 gacaccggacacgacacggatgctgacacgccgacacaactaataatttg-aaaaaatcacataattaagtgcaattacaagtgtcg 853865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 101
Target Start/End: Original strand, 7938084 - 7938169
Alignment:
Q  15 gacaccagacacaacacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 101  Q
    |||||| ||||| ||| |||||| ||||||||||||||||||| || ||| ||||||||| |||||| | ||| |||| ||||||||    
T  7938084 gacaccggacacgacatggacactgacacgccgacacagctaa-taatttgaaaaaatcatataatttagtgtaattataagtgtcg 7938169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 28152080 - 28152151
Alignment:
Q  28 acacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 101  Q
    |||||||||| |||||||||||| ||||||| |  ||| ||||||||||||||| | ||| |||||||||||||    
T  28152080 acacggacactgacacgccgacaaagctaataa--tttgaaaaatcacataattcagtgtaattacaagtgtcg 28152151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 8777057 - 8776981
Alignment:
Q  22 gacacaacacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgt 99  Q
    ||||| |||||||||| |||||||||||||| |||| || ||| ||||||||||| |||| | ||| |||||||||||    
T  8777057 gacacgacacggacactgacacgccgacacaactaa-taatttgaaaaaatcacaaaattcagtgtaattacaagtgt 8776981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 22 - 101
Target Start/End: Complemental strand, 7977914 - 7977836
Alignment:
Q  22 gacacaacacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 101  Q
    ||||| ||| ||| || ||||||||||||||||||| || ||| ||||||| |||||||| | ||| |||||||||||||    
T  7977914 gacacgacatggatactgacacgccgacacagctaa-taatttgaaaaaattacataattcagtgtaattacaagtgtcg 7977836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 22 - 101
Target Start/End: Complemental strand, 10770758 - 10770680
Alignment:
Q  22 gacacaacacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 101  Q
    ||||| ||| |||||| |||||||| ||||| ||||| ||||  |||||||||||||||| | ||| |||||||||||||    
T  10770758 gacacgacatggacactgacacgccaacacaactaataatttg-aaaaaatcacataattcagtgtaattacaagtgtcg 10770680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 22 - 101
Target Start/End: Complemental strand, 15489816 - 15489738
Alignment:
Q  22 gacacaacacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 101  Q
    ||||||||||||||||  ||||| ||||||| |||| || ||| ||||||| ||| |||| ||||| |||||||||||||    
T  15489816 gacacaacacggacactaacacgtcgacacaactaa-taatttgaaaaaattacacaattcaatgtaattacaagtgtcg 15489738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 22 - 101
Target Start/End: Original strand, 16833283 - 16833361
Alignment:
Q  22 gacacaacacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 101  Q
    ||||| |||| ||||| |||||||||||||| |||| || ||| ||||||||||||| || | ||| |||||||||||||    
T  16833283 gacacgacacagacactgacacgccgacacaactaa-taatttgaaaaaatcacatacttcagtgtaattacaagtgtcg 16833361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 39 - 101
Target Start/End: Original strand, 4877934 - 4877996
Alignment:
Q  39 gacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 101  Q
    ||||| |||||||||||||| ||||  ||||| |||||||||||| | | |||||||||||||    
T  4877934 gacacaccgacacagctaataatttgaaaaaagtcacataattaagtataattacaagtgtcg 4877996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 66 - 99
Target Start/End: Complemental strand, 4118374 - 4118341
Alignment:
Q  66 aaaaaatcacataattaaatgtgattacaagtgt 99  Q
    |||||||||||||||||||||| |||||||||||    
T  4118374 aaaaaatcacataattaaatgtaattacaagtgt 4118341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 81
Target Start/End: Original strand, 9658852 - 9658912
Alignment:
Q  20 cagacacaacacggacacagacacgccgacacagctaattatttttaaaaaatcacataatt 81  Q
    ||||||| |||||||||| ||||||||||||| ||||| || ||| | ||||||||||||||    
T  9658852 cagacacgacacggacactgacacgccgacaccgctaa-taatttaagaaaatcacataatt 9658912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 76
Target Start/End: Original strand, 18367805 - 18367864
Alignment:
Q  15 gacaccagacacaacacggacacagacacgccgacacagctaattatttttaaaaaatcaca 76  Q
    |||||| ||||| ||| |||||| ||||||||||||||||||||| |||||| |||||||||    
T  18367805 gacaccggacacgacatggacac-gacacgccgacacagctaatt-tttttagaaaatcaca 18367864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 31959140 - 31959212
Alignment:
Q  28 acacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 101  Q
    ||||| |||| ||||||||| |||||||||| ||||  |||||||||||||||  | ||| |||||||||||||    
T  31959140 acacgaacactgacacgccgtcacagctaataatttg-aaaaaatcacataatgcagtgtaattacaagtgtcg 31959212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 3398595 - 3398635
Alignment:
Q  23 acacaacacggacacagacacgccgacacagctaattattt 63  Q
    |||| |||||||||| |||||||||||||||||||| ||||    
T  3398595 acacgacacggacactgacacgccgacacagctaataattt 3398635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 2e-17; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 15 - 101
Target Start/End: Original strand, 22651944 - 22652029
Alignment:
Q  15 gacaccagacacaacacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 101  Q
    |||||| ||||| |||||||||| ||||||||||||||||||| || ||| |||||||||||||||| ||| | |||||||||||||    
T  22651944 gacaccggacacgacacggacactgacacgccgacacagctaa-taatttgaaaaaatcacataattcaatataattacaagtgtcg 22652029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 15 - 101
Target Start/End: Complemental strand, 29510395 - 29510310
Alignment:
Q  15 gacaccagacacaacacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 101  Q
    |||||| ||||| |||||||||| ||||||||||||||||||| || ||| ||||||||||| |||| | | | |||||||||||||    
T  29510395 gacaccggacacgacacggacactgacacgccgacacagctaa-taatttgaaaaaatcacaaaattcagtataattacaagtgtcg 29510310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 22 - 101
Target Start/End: Original strand, 20873044 - 20873122
Alignment:
Q  22 gacacaacacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 101  Q
    ||||| |||||||||| |||||||||||| || |||| ||||  |||||||||||||||| | ||| |||||||||||||    
T  20873044 gacacgacacggacactgacacgccgacatagataataatttg-aaaaaatcacataatttagtgtaattacaagtgtcg 20873122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 40 - 101
Target Start/End: Complemental strand, 4298952 - 4298892
Alignment:
Q  40 acacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 101  Q
    |||||||||||||| |||| ||||  |||||||||||||||| ||||| |||||||||||||    
T  4298952 acacgccgacacagttaataatttg-aaaaaatcacataatttaatgtaattacaagtgtcg 4298892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 33 - 101
Target Start/End: Original strand, 18407705 - 18407772
Alignment:
Q  33 gacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 101  Q
    |||||||||| ||||||||||||||| |||   |||||||||||||||| | ||| |||||||||||||    
T  18407705 gacacagacatgccgacacagctaataattca-aaaaaatcacataattcagtgtaattacaagtgtcg 18407772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 22 - 101
Target Start/End: Complemental strand, 2572140 - 2572062
Alignment:
Q  22 gacacaacacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 101  Q
    ||||| ||||||| || |||||| ||||||| ||||| ||||  |||||||||||||||| | ||| |||||||||||||    
T  2572140 gacacgacacggataccgacacgtcgacacacctaataatttg-aaaaaatcacataatttagtgtaattacaagtgtcg 2572062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 15816205 - 15816135
Alignment:
Q  30 acggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 101  Q
    |||||||| |||||||||||||| |||| || ||| |||||||||||||||| | ||| |||| ||||||||    
T  15816205 acggacactgacacgccgacacaactaa-taatttgaaaaaatcacataatttagtgtaattataagtgtcg 15816135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 39 - 101
Target Start/End: Original strand, 24613513 - 24613573
Alignment:
Q  39 gacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 101  Q
    ||||| |||||||||||||| ||||   ||||||||||||||||| ||| |||||||||||||    
T  24613513 gacacaccgacacagctaataatttg--aaaaatcacataattaagtgtaattacaagtgtcg 24613573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 98
Target Start/End: Complemental strand, 30271366 - 30271300
Alignment:
Q  31 cggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtg 98  Q
    ||||||| |||||||||||||||||||| | ||| |||||||||||||||  | ||| ||||||||||    
T  30271366 cggacactgacacgccgacacagctaatca-tttgaaaaaatcacataatgcagtgtaattacaagtg 30271300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 99
Target Start/End: Complemental strand, 36450832 - 36450762
Alignment:
Q  28 acacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgt 99  Q
    |||||||||| |||||||||||||| |||| || ||| ||||||||||| |||| | ||| |||||||||||    
T  36450832 acacggacactgacacgccgacacaactaa-taatttgaaaaaatcacagaattcagtgtaattacaagtgt 36450762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 22 - 100
Target Start/End: Original strand, 8343291 - 8343368
Alignment:
Q  22 gacacaacacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtc 100  Q
    ||||| |||| ||||| ||||| |||||| ||||||| ||||  |||||||||||||||| | ||| ||||||||||||    
T  8343291 gacacgacactgacaccgacacaccgacatagctaataatttg-aaaaaatcacataatttagtgtaattacaagtgtc 8343368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 15 - 81
Target Start/End: Complemental strand, 13437055 - 13436990
Alignment:
Q  15 gacaccagacacaacacggacacagacacgccgacacagctaattatttttaaaaaatcacataatt 81  Q
    |||||| ||||  ||| |||||| ||||||||||||||||||| || ||| ||||||||||||||||    
T  13437055 gacaccggacatgacatggacactgacacgccgacacagctaa-taatttgaaaaaatcacataatt 13436990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 34 - 104
Target Start/End: Complemental strand, 41832012 - 41831943
Alignment:
Q  34 acacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcgtgt 104  Q
    ||||||||| |||||||||| |||| ||||  |||||||||||||||| | ||| | ||||||||||||||    
T  41832012 acacagacatgccgacacagttaataatttg-aaaaaatcacataattcagtgtaactacaagtgtcgtgt 41831943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 100
Target Start/End: Complemental strand, 22197833 - 22197749
Alignment:
Q  15 gacaccagacacaacacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtc 100  Q
    |||||| ||||| |||| |||||  ||||||| |||||||||| || ||| ||||| |||||||||| | ||| ||||||||||||    
T  22197833 gacaccggacacgacacagacactaacacgccaacacagctaa-taatttgaaaaattcacataatttagtgtaattacaagtgtc 22197749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 99
Target Start/End: Original strand, 22595981 - 22596045
Alignment:
Q  34 acacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgt 99  Q
    |||| ||||||||||||||||||| || ||| ||||||| |||||||| | ||| |||||||||||    
T  22595981 acactgacacgccgacacagctaa-taatttaaaaaaataacataattcagtgtaattacaagtgt 22596045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 21 - 81
Target Start/End: Complemental strand, 41838208 - 41838149
Alignment:
Q  21 agacacaacacggacacagacacgccgacacagctaattatttttaaaaaatcacataatt 81  Q
    |||||| | |||||||| |||||| |||||||||||| || ||| ||||||||||||||||    
T  41838208 agacacgatacggacactgacacgtcgacacagctaa-taatttaaaaaaatcacataatt 41838149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 6e-17; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 37558958 - 37559030
Alignment:
Q  28 acacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 101  Q
    |||||||||| |||||||||||||||||||| |||| | ||||||||||||||| ||||| |||||||||||||    
T  37558958 acacggacactgacacgccgacacagctaataatttgt-aaaaatcacataattcaatgtaattacaagtgtcg 37559030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 15 - 101
Target Start/End: Complemental strand, 19536489 - 19536403
Alignment:
Q  15 gacaccagacacaacacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 101  Q
    |||||| ||||| |||||||||  |||||||||||||| ||||| ||||  |||||||||||||||| | ||| |||||||||||||    
T  19536489 gacaccggacacgacacggacaatgacacgccgacacaactaataatttgaaaaaaatcacataattcagtgtaattacaagtgtcg 19536403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 6940236 - 6940308
Alignment:
Q  28 acacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 101  Q
    |||||||||| ||||||||||||||||||| || ||||||||| | |||||||||| ||| |||||||||||||    
T  6940236 acacggacactgacacgccgacacagctaa-taattttaaaaagttacataattaagtgtaattacaagtgtcg 6940308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 23 - 101
Target Start/End: Original strand, 21624242 - 21624320
Alignment:
Q  23 acacaacacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 101  Q
    |||| |||| ||||| |||||||||||||||||||| ||||| |||||||  ||||||| | ||| |||||||||||||    
T  21624242 acacgacacagacactgacacgccgacacagctaataattttaaaaaaatagcataattcagtgtaattacaagtgtcg 21624320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 32 - 101
Target Start/End: Complemental strand, 11223937 - 11223869
Alignment:
Q  32 ggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 101  Q
    |||||||||||||| |||||||||||| ||||| ||||||| |||||||| | ||| |||||||||||||    
T  11223937 ggacacagacacgctgacacagctaat-attttgaaaaaataacataattcagtgtaattacaagtgtcg 11223869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 28 - 101
Target Start/End: Complemental strand, 14996302 - 14996229
Alignment:
Q  28 acacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 101  Q
    |||||||||| |||| ||||||||||||||| ||||  ||||||||| |||||| | ||| |||||||||||||    
T  14996302 acacggacactgacaagccgacacagctaataatttgaaaaaaatcatataatttagtgtaattacaagtgtcg 14996229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 22 - 101
Target Start/End: Complemental strand, 20539758 - 20539680
Alignment:
Q  22 gacacaacacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 101  Q
    ||||| |||||||||| |||||| |||||||||||| || ||| ||||||||| |||||| | ||| |||||||||||||    
T  20539758 gacacgacacggacactgacacgtcgacacagctaa-taatttgaaaaaatcatataatttagtgtaattacaagtgtcg 20539680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 81
Target Start/End: Complemental strand, 34785069 - 34785008
Alignment:
Q  19 ccagacacaacacggacacagacacgccgacacagctaattatttttaaaaaatcacataatt 81  Q
    |||||||| |||||||||| ||||| |||||||| |||||| |||||| ||||||||||||||    
T  34785069 ccagacacgacacggacactgacacaccgacacaactaatt-tttttagaaaatcacataatt 34785008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 15 - 76
Target Start/End: Complemental strand, 18054895 - 18054834
Alignment:
Q  15 gacaccagacacaacacggacacagacacgccgacacagctaattatttttaaaaaatcaca 76  Q
    |||||| ||||| ||| |||||| |||||| |||||||||||||| |||||| |||||||||    
T  18054895 gacaccggacacgacagggacaccgacacgtcgacacagctaattttttttagaaaatcaca 18054834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 20242813 - 20242753
Alignment:
Q  20 cagacacaacacggacacagacacgccgacacagctaattatttttaaaaaatcacataatt 81  Q
    ||||||| ||| |||||| |||||||||||||| |||||| |||||| ||||||||||||||    
T  20242813 cagacacgacatggacactgacacgccgacacaactaatt-tttttagaaaatcacataatt 20242753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 28 - 81
Target Start/End: Original strand, 24894370 - 24894422
Alignment:
Q  28 acacggacacagacacgccgacacagctaattatttttaaaaaatcacataatt 81  Q
    |||||||||| ||||||||||||||||||| || ||| ||||||||||||||||    
T  24894370 acacggacactgacacgccgacacagctaa-taatttaaaaaaatcacataatt 24894422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 28 - 101
Target Start/End: Complemental strand, 30404928 - 30404856
Alignment:
Q  28 acacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 101  Q
    |||||||||| ||||||||||||| | |||| ||||  |||||||||||||||| | ||| |||||||||||||    
T  30404928 acacggacactgacacgccgacacggttaataatttg-aaaaaatcacataattcagtgtaattacaagtgtcg 30404856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 28 - 100
Target Start/End: Complemental strand, 21374777 - 21374706
Alignment:
Q  28 acacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtc 100  Q
    ||||||||||  |||||||||||||||||| || ||| ||||||| |||||||| | ||| ||||||||||||    
T  21374777 acacggacactaacacgccgacacagctaa-taatttgaaaaaattacataattcagtgtaattacaagtgtc 21374706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 101
Target Start/End: Complemental strand, 2438808 - 2438725
Alignment:
Q  15 gacaccagacacaacacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 101  Q
    |||||| |||| ||||||||||| |||  || |||||||||||| ||||  |||||||||||||||| | ||| |||||||||||||    
T  2438808 gacaccggacaaaacacggacactgac--gctgacacagctaataatttc-aaaaaatcacataattcagtgtaattacaagtgtcg 2438725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 101
Target Start/End: Original strand, 15972840 - 15972926
Alignment:
Q  14 agacaccagacacaacacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 101  Q
    |||||||||| || |||||||||| ||||||||||||||  ||| || ||| ||||||| ||| |||| | ||| |||||||||||||    
T  15972840 agacaccagatacgacacggacactgacacgccgacacaattaa-taatttgaaaaaattacacaattcagtgtaattacaagtgtcg 15972926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 22 - 101
Target Start/End: Complemental strand, 18841097 - 18841019
Alignment:
Q  22 gacacaacacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 101  Q
    ||||| ||| |||||| ||||||| |||||| ||||| ||||  ||||||| |||||||||| ||| |||||||||||||    
T  18841097 gacacgacatggacactgacacgctgacacaactaataatttg-aaaaaattacataattaagtgtaattacaagtgtcg 18841019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 18421944 - 18422016
Alignment:
Q  28 acacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 101  Q
    |||||||||| ||||||||||||||  ||| || ||| |||| ||||||||||| | ||| |||||||||||||    
T  18421944 acacggacactgacacgccgacacaattaa-taatttaaaaatatcacataattcagtgtaattacaagtgtcg 18422016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 27460011 - 27460060
Alignment:
Q  32 ggacacagacacgccgacacagctaattatttttaaaaaatcacataatt 81  Q
    |||||| |||||||||||||||||||| ||||  ||||||| ||||||||    
T  27460011 ggacactgacacgccgacacagctaataatttgaaaaaaatgacataatt 27460060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 101
Target Start/End: Complemental strand, 30717608 - 30717536
Alignment:
Q  28 acacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 101  Q
    |||||||||| ||||  |||||| ||||||| ||||  |||||||||||||||| | ||| |||||||||||||    
T  30717608 acacggacactgacaaaccgacaaagctaataatttg-aaaaaatcacataattcagtgtaattacaagtgtcg 30717536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 17 - 101
Target Start/End: Original strand, 15657834 - 15657917
Alignment:
Q  17 caccagacacaacacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 101  Q
    |||| ||||| ||||||||||  |||||||||| || ||||| |||| ||||| ||||||||||| | ||| ||||||| |||||    
T  15657834 caccggacacgacacggacactaacacgccgactcaactaataatttgtaaaa-atcacataattcagtgtaattacaaatgtcg 15657917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 15 - 101
Target Start/End: Complemental strand, 21191147 - 21191062
Alignment:
Q  15 gacaccagacacaacacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 101  Q
    |||||| ||||| |||||||||| |||| |||||||||||||| || ||| |||||||||||||||| | ||| |||||||||||||    
T  21191147 gacaccggacacgacacggacactgacatgccgacacagctaa-taatttgaaaaaatcacataattcagtgtaattacaagtgtcg 21191062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 14674250 - 14674322
Alignment:
Q  28 acacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 101  Q
    |||||||||| ||||||||||||||||||| || ||| |||||||||||||||| | ||| |||||||||||||    
T  14674250 acacggacactgacacgccgacacagctaa-taatttgaaaaaatcacataatttagtgtaattacaagtgtcg 14674322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 17 - 101
Target Start/End: Original strand, 21522720 - 21522803
Alignment:
Q  17 caccagacacaacacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 101  Q
    |||| ||||| |||||||||| ||||||||||||||||||| || ||||||||||| |||||||| | ||| ||||||| |||||    
T  21522720 caccggacacgacacggacactgacacgccgacacagctaa-taattttaaaaaataacataattcagtgtaattacaattgtcg 21522803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 17 - 101
Target Start/End: Original strand, 21533286 - 21533369
Alignment:
Q  17 caccagacacaacacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 101  Q
    |||| ||||| |||||||||| ||||||||||||||||||| || ||||||||||| |||||||| | ||| ||||||| |||||    
T  21533286 caccggacacgacacggacactgacacgccgacacagctaa-taattttaaaaaataacataattcagtgtaattacaattgtcg 21533369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 33 - 101
Target Start/End: Original strand, 31084309 - 31084376
Alignment:
Q  33 gacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 101  Q
    ||||| |||||||||||||||||||| ||||  |||||||||||||||| ||||| |||||||||||||    
T  31084309 gacactgacacgccgacacagctaataatttg-aaaaaatcacataattcaatgtaattacaagtgtcg 31084376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 101
Target Start/End: Original strand, 6247590 - 6247675
Alignment:
Q  15 gacaccagacacaacacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 101  Q
    |||||| ||||| | ||| |||| |||||||||||||| ||||| ||||  |||||||||||||||| | ||| |||||||||||||    
T  6247590 gacaccggacacgatacgcacactgacacgccgacacatctaataatttg-aaaaaatcacataattcagtgtaattacaagtgtcg 6247675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 101
Target Start/End: Original strand, 19579669 - 19579754
Alignment:
Q  15 gacaccagacacaacacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 101  Q
    |||||| || ||||||||||||| || |||||||||||||||| || ||| | |||||||||||||| | ||  |||||||||||||    
T  19579669 gacaccggatacaacacggacactgatacgccgacacagctaa-taatttgagaaaatcacataatttagtgcaattacaagtgtcg 19579754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 30 - 100
Target Start/End: Original strand, 39698524 - 39698593
Alignment:
Q  30 acggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtc 100  Q
    |||||||| ||||||| |||||||||||| ||||  |||||||||||||||| | ||| ||||||||||||    
T  39698524 acggacactgacacgctgacacagctaataatttg-aaaaaatcacataattcagtgtaattacaagtgtc 39698593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 23 - 83
Target Start/End: Complemental strand, 19552626 - 19552567
Alignment:
Q  23 acacaacacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaa 83  Q
    |||| |||||||||| ||||||||||||||| ||| || ||| ||||||||||||||||||    
T  19552626 acacgacacggacactgacacgccgacacagttaa-taatttgaaaaaatcacataattaa 19552567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 22013382 - 22013430
Alignment:
Q  15 gacaccagacacaacacggacacagacacgccgacacagctaattattt 63  Q
    |||||| ||||| |||||||||| |||||||||||||||||||| ||||    
T  22013382 gacaccggacacgacacggacactgacacgccgacacagctaataattt 22013430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 101
Target Start/End: Original strand, 15382445 - 15382532
Alignment:
Q  15 gacaccagacacaacacggacacagacacgccgacacagctaattattt-ttaaaaaatcacataattaaatgtgattacaagtgtcg 101  Q
    |||||| ||||| |||||||||  |||||||||||||||||||| ||||   ||||||||| |||||| | | | |||||||||||||    
T  15382445 gacaccggacacgacacggacaatgacacgccgacacagctaataatttgaaaaaaaatcatataattcagtataattacaagtgtcg 15382532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 42 - 101
Target Start/End: Original strand, 15883982 - 15884041
Alignment:
Q  42 acgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 101  Q
    ||||||||||||| ||| ||||  |||||||||||||||| | ||| |||||||||||||    
T  15883982 acgccgacacagcaaataatttaaaaaaaatcacataattcagtgtaattacaagtgtcg 15884041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 22 - 101
Target Start/End: Original strand, 30135288 - 30135367
Alignment:
Q  22 gacacaacacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 101  Q
    ||||| |||| || || |||||||||||||| ||||| ||||  |||||||||||||| | | ||| |||||||||||||    
T  30135288 gacacgacacagataccgacacgccgacacaactaataatttgaaaaaaatcacataactcattgtaattacaagtgtcg 30135367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 39 - 101
Target Start/End: Original strand, 8420019 - 8420080
Alignment:
Q  39 gacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 101  Q
    |||||||||||| ||||||| ||||  ||||||| |||||||| ||||| |||||||||||||    
T  8420019 gacacgccgacatagctaataatttg-aaaaaataacataattcaatgtaattacaagtgtcg 8420080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 15 - 101
Target Start/End: Complemental strand, 13287490 - 13287405
Alignment:
Q  15 gacaccagacacaacacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 101  Q
    |||||| ||||| ||||||||||  ||||| |||||||| |||| ||||  |||||||||||||||| | ||| | |||||||||||    
T  13287490 gacaccggacacgacacggacactaacacgtcgacacagataataatttg-aaaaaatcacataattcagtgtaactacaagtgtcg 13287405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 39 - 101
Target Start/End: Original strand, 33178017 - 33178078
Alignment:
Q  39 gacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 101  Q
    |||||||||||||| ||||| ||||  |||||||||||||||| | ||| |||||||||||||    
T  33178017 gacacgccgacacaactaataattta-aaaaaatcacataatttagtgtaattacaagtgtcg 33178078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 47 - 100
Target Start/End: Original strand, 17088284 - 17088337
Alignment:
Q  47 gacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtc 100  Q
    |||||| ||||| ||||  |||||||||||||||| | ||||||||||||||||    
T  17088284 gacacatctaataatttgaaaaaaatcacataatttagtgtgattacaagtgtc 17088337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 101
Target Start/End: Complemental strand, 21576823 - 21576751
Alignment:
Q  28 acacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 101  Q
    ||||| |||| || ||||| ||||||||||| ||||  |||||||||||||||| | ||| |||||||||||||    
T  21576823 acacgaacactgatacgccaacacagctaataatttg-aaaaaatcacataattcagtgtaattacaagtgtcg 21576751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 36642854 - 36642805
Alignment:
Q  14 agacaccagacacaacacggacacagacacgccgacacagctaattattt 63  Q
    ||||||| ||||| |||||||||| ||||||||||||||| |||| ||||    
T  36642854 agacaccggacacgacacggacactgacacgccgacacagttaataattt 36642805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 101
Target Start/End: Original strand, 42893345 - 42893413
Alignment:
Q  32 ggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 101  Q
    |||||| ||||| ||||||||||||| || ||| |||||||||||||||  | ||| |||||||||||||    
T  42893345 ggacacggacacaccgacacagctaa-taatttgaaaaaatcacataatccagtgtaattacaagtgtcg 42893413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 15410539 - 15410491
Alignment:
Q  15 gacaccagacacaacacggacacagacacgccgacacagctaattattt 63  Q
    |||| ||||||| |||||||||| ||||||||||||| |||||| ||||    
T  15410539 gacatcagacacgacacggacactgacacgccgacaccgctaataattt 15410491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 17 - 101
Target Start/End: Complemental strand, 24906390 - 24906307
Alignment:
Q  17 caccagacacaacacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 101  Q
    |||| ||||| ||||| |||| |||||||| |||||| |||| ||||  ||||||| |||||||| | ||| |||||||||||||    
T  24906390 caccggacacgacacgaacactgacacgccaacacagataataatttg-aaaaaatgacataattcagtgtaattacaagtgtcg 24906307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 100
Target Start/End: Original strand, 20140 - 20224
Alignment:
Q  15 gacaccagacacaacacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtc 100  Q
    |||||| ||||| |||||||||  ||||||||||||||||||| || ||| |||||||||||||||| | ||| ||||||||||||    
T  20140 gacaccggacacgacacggacaatgacacgccgacacagctaa-taatttgaaaaaatcacataattcagtgtaattacaagtgtc 20224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 11)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 18213124 - 18213059
Alignment:
Q  16 acaccagacacaacacggacacagacacgccgacacagctaattatttttaaaaaatcacataatt 81  Q
    ||||||||||| |||||||||| || ||||||||||| |||||| |||||| ||||||||||||||    
T  18213124 acaccagacacgacacggacactgatacgccgacacaactaattttttttagaaaatcacataatt 18213059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 15 - 101
Target Start/End: Original strand, 24339610 - 24339695
Alignment:
Q  15 gacaccagacacaacacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 101  Q
    |||||| ||||| ||| |||||  ||||||||||||||||||| || ||| |||||||||||||||| | ||| |||||||||||||    
T  24339610 gacaccggacacgacatggacattgacacgccgacacagctaa-taatttgaaaaaatcacataattcagtgtaattacaagtgtcg 24339695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 22 - 99
Target Start/End: Original strand, 25481877 - 25481953
Alignment:
Q  22 gacacaacacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgt 99  Q
    ||||||||| |||||  ||||||||||||||||||| || ||| |||||||||||||||| | ||| |||||||||||    
T  25481877 gacacaacatggacaatgacacgccgacacagctaa-taatttgaaaaaatcacataattcagtgtaattacaagtgt 25481953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 22 - 102
Target Start/End: Original strand, 13770666 - 13770745
Alignment:
Q  22 gacacaacacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcgt 102  Q
    ||||| |||||||||| || |||||||||||||||| || ||| ||||||| |||||||| | ||| ||||||||||||||    
T  13770666 gacacgacacggacactgatacgccgacacagctaa-taatttaaaaaaattacataattcagtgtaattacaagtgtcgt 13770745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 28 - 101
Target Start/End: Complemental strand, 11061154 - 11061082
Alignment:
Q  28 acacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 101  Q
    |||||||||| ||||| ||||||||||||| || ||| |||||||||||||||| | | | |||||||||||||    
T  11061154 acacggacactgacacaccgacacagctaa-taatttgaaaaaatcacataatttagtataattacaagtgtcg 11061082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 101
Target Start/End: Original strand, 7438693 - 7438759
Alignment:
Q  34 acacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 101  Q
    |||| |||| |||||||||| |||| ||||  |||||||||||||||| ||||| |||||||||||||    
T  7438693 acactgacatgccgacacagttaataatttg-aaaaaatcacataattcaatgtaattacaagtgtcg 7438759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 22 - 101
Target Start/End: Original strand, 24105653 - 24105731
Alignment:
Q  22 gacacaacacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 101  Q
    ||||| |||||||||| ||||||||||||||||||| || ||| |||||||  ||| ||| | ||| |||||||||||||    
T  24105653 gacacgacacggacactgacacgccgacacagctaa-taatttgaaaaaattgcatgattcagtgtaattacaagtgtcg 24105731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 39 - 101
Target Start/End: Complemental strand, 7197364 - 7197303
Alignment:
Q  39 gacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 101  Q
    ||||||||||||||||||| || ||| |||||||||  ||||| ||||| |||||||||||||    
T  7197364 gacacgccgacacagctaa-taatttaaaaaaatcatttaattcaatgtaattacaagtgtcg 7197303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 15 - 81
Target Start/End: Original strand, 26733272 - 26733337
Alignment:
Q  15 gacaccagacacaacacggacacagacacgccgacacagctaattatttttaaaaaatcacataatt 81  Q
    |||||||||||| |||||||||| |||||| |||||| ||||| || ||| | ||||||||||||||    
T  26733272 gacaccagacacgacacggacactgacacgtcgacaccgctaa-taatttgacaaaatcacataatt 26733337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 15 - 101
Target Start/End: Original strand, 27945009 - 27945094
Alignment:
Q  15 gacaccagacacaacacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 101  Q
    |||||| ||||| |||||||||| |||||||||||||  |||| || ||| | ||||| |||||||| | ||| |||||||||||||    
T  27945009 gacaccggacacgacacggacactgacacgccgacaccactaa-taatttgagaaaattacataattcagtgtaattacaagtgtcg 27945094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 22 - 101
Target Start/End: Original strand, 21864781 - 21864861
Alignment:
Q  22 gacacaacacggacacagacacgccgacacagctaattattt-ttaaaaaatcacataattaaatgtgattacaagtgtcg 101  Q
    ||||| |||||||||| ||||| | |||||||||||| ||||   ||||||||| |||||| | ||| |||||||||||||    
T  21864781 gacacgacacggacacggacacacggacacagctaataatttgaaaaaaaatcatataatttagtgtaattacaagtgtcg 21864861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 19)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 100
Target Start/End: Original strand, 28084489 - 28084574
Alignment:
Q  15 gacaccagacacaacacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtc 100  Q
    |||||| ||||| |||| ||| | |||||||||||||||||||  ||||  |||||||||||||||| ||||| ||||||||||||    
T  28084489 gacaccggacacgacacagacgctgacacgccgacacagctaagaatttgaaaaaaatcacataattcaatgtaattacaagtgtc 28084574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 30298927 - 30299000
Alignment:
Q  28 acacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 101  Q
    |||||||||| |||||||||||||||||||| ||||  ||||||| |||||||| | ||| |||||||||||||    
T  30298927 acacggacactgacacgccgacacagctaataatttgaaaaaaatgacataattcagtgtaattacaagtgtcg 30299000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 30327795 - 30327868
Alignment:
Q  28 acacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 101  Q
    |||||||||| |||||||||||||||||||| ||||  ||||||| |||||||| | ||| |||||||||||||    
T  30327795 acacggacactgacacgccgacacagctaataatttgaaaaaaatgacataattcagtgtaattacaagtgtcg 30327868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 15 - 101
Target Start/End: Complemental strand, 23293077 - 23292992
Alignment:
Q  15 gacaccagacacaacacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 101  Q
    |||||| ||||| |||||||||  ||||||||||||||||||| || ||| |||||||||||||||| | | | |||||||||||||    
T  23293077 gacaccggacacgacacggacaatgacacgccgacacagctaa-taatttgaaaaaatcacataattcagtataattacaagtgtcg 23292992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 15 - 76
Target Start/End: Complemental strand, 5414263 - 5414203
Alignment:
Q  15 gacaccagacacaacacggacacagacacgccgacacagctaattatttttaaaaaatcaca 76  Q
    |||||| ||||| |||||||||| ||||||||||||||||||||| |||||| |||||||||    
T  5414263 gacaccggacacgacacggacacggacacgccgacacagctaatt-tttttagaaaatcaca 5414203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 22 - 101
Target Start/End: Original strand, 49431000 - 49431079
Alignment:
Q  22 gacacaacacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 101  Q
    ||||| || ||||||  |||||||||||||||||||| ||||  |||||||||||||||| | ||| |||| ||||||||    
T  49431000 gacacgactcggacagtgacacgccgacacagctaataatttgaaaaaaatcacataattcagtgtaattaaaagtgtcg 49431079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 101
Target Start/End: Original strand, 12708114 - 12708200
Alignment:
Q  15 gacaccagacacaacacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 101  Q
    |||| ||||||| || | ||||| ||||||| |||||| ||||| ||||||||||||| | |||||| | ||| |||||||||||||    
T  12708114 gacatcagacacgacgcagacactgacacgcagacacaactaataatttttaaaaaatgaaataattcagtgtaattacaagtgtcg 12708200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 101
Target Start/End: Complemental strand, 35158076 - 35157991
Alignment:
Q  15 gacaccagacacaacacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 101  Q
    |||||| |||||||||||||||| ||||||||||| || |||| || |||  ||||||||||||||| | ||| |||| ||||||||    
T  35158076 gacaccggacacaacacggacactgacacgccgacgcaactaa-taatttggaaaaatcacataatttagtgtaattataagtgtcg 35157991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 28 - 101
Target Start/End: Complemental strand, 12895193 - 12895122
Alignment:
Q  28 acacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 101  Q
    |||||||||| |||||||||| ||||||||| ||||  |||||||||||||||| || || |||||||||||||    
T  12895193 acacggacac-gacacgccgaaacagctaataatttg-aaaaaatcacataattcaaagtaattacaagtgtcg 12895122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 14 - 99
Target Start/End: Original strand, 19482635 - 19482719
Alignment:
Q  14 agacaccagacacaacacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgt 99  Q
    ||||||||||||| |||| ||||| |||||||||||||| |||| || ||| |||| |||||||||||   ||| |||||||||||    
T  19482635 agacaccagacacgacacagacactgacacgccgacacaactaa-taatttgaaaatatcacataattcggtgtaattacaagtgt 19482719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 15 - 105
Target Start/End: Original strand, 20633453 - 20633539
Alignment:
Q  15 gacaccagacacaacacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcgtgtc 105  Q
    |||||||||||| | |||||||| |||||| |||||| |||||| ||||  ||||    |||||||| ||||| |||||||||||||||||    
T  20633453 gacaccagacacgatacggacactgacacgtcgacaccgctaataatttgaaaaa----acataattcaatgtaattacaagtgtcgtgtc 20633539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 28 - 101
Target Start/End: Complemental strand, 31800556 - 31800484
Alignment:
Q  28 acacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 101  Q
    ||||| |||| ||||| |||||||||||||| ||||| ||||||| | |||||| ||||| |||||||||||||    
T  31800556 acacgaacaccgacacaccgacacagctaataatttt-aaaaaattaaataatttaatgtaattacaagtgtcg 31800484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 27706268 - 27706185
Alignment:
Q  15 gacaccagacacaacacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgt 99  Q
    |||||||||||| ||| |||||| |||||| |||||||  |||| ||||  |||||||||||||||| | ||| |||||||||||    
T  27706268 gacaccagacacgacagggacactgacacgtcgacacaattaataattta-aaaaaatcacataatttagtgtaattacaagtgt 27706185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 40 - 99
Target Start/End: Complemental strand, 715674 - 715615
Alignment:
Q  40 acacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgt 99  Q
    |||| |||||||||||||| ||||  |||||||||||||||| | ||| |||||||||||    
T  715674 acacaccgacacagctaataatttaaaaaaaatcacataattcagtgtaattacaagtgt 715615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 40 - 99
Target Start/End: Complemental strand, 753000 - 752941
Alignment:
Q  40 acacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgt 99  Q
    |||| |||||||||||||| ||||  |||||||||||||||| | ||| |||||||||||    
T  753000 acacaccgacacagctaataatttaaaaaaaatcacataattcagtgtaattacaagtgt 752941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 22 - 100
Target Start/End: Complemental strand, 3947850 - 3947773
Alignment:
Q  22 gacacaacacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtc 100  Q
    ||||| |||| ||||| |||| |||||||||||||| || ||| |||||||| ||||||| | ||| ||||||||||||    
T  3947850 gacaccacacagacacggacatgccgacacagctaa-taatttgaaaaaatcgcataattcagtgtaattacaagtgtc 3947773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 15 - 101
Target Start/End: Original strand, 21945471 - 21945556
Alignment:
Q  15 gacaccagacacaacacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 101  Q
    |||||| ||||  |||| ||||| |||| |||||||||||||| || ||| ||||||| |||||||| | ||| |||||||||||||    
T  21945471 gacaccggacatgacacagacactgacatgccgacacagctaa-taatttgaaaaaatgacataattcagtgtaattacaagtgtcg 21945556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 21 - 81
Target Start/End: Complemental strand, 11651219 - 11651160
Alignment:
Q  21 agacacaacacggacacagacacgccgacacagctaattatttttaaaaaatcacataatt 81  Q
    |||||| | |||||||| |||||| |||||||||||| || ||| ||||||||||||||||    
T  11651219 agacacgatacggacactgacacgtcgacacagctaa-taatttaaaaaaatcacataatt 11651160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 50280867 - 50280933
Alignment:
Q  33 gacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtg--attacaagtg 98  Q
    ||||| ||||||||||||||||||| || ||| ||||| |||||||||||| ||||  ||||||||||    
T  50280867 gacacggacacgccgacacagctaa-taatttgaaaaattcacataattaagtgtgtaattacaagtg 50280933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 28 - 99
Target Start/End: Original strand, 51792 - 51862
Alignment:
Q  28 acacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgt 99  Q
    |||||||||| ||||||||||||||||||| || ||| |||||||||||||||| | ||| |||||||||||    
T  51792 acacggacactgacacgccgacacagctaa-taatttgaaaaaatcacataattcagtgtaattacaagtgt 51862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 27505229 - 27505299
Alignment:
Q  30 acggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 101  Q
    ||||| || |||| ||||||||||||||| |||||||||| ||||||||||||| ||| |||||||||||||    
T  27505229 acggatacggacaagccgacacagctaataatttttaaaa-atcacataattaagtgtaattacaagtgtcg 27505299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 15 - 101
Target Start/End: Complemental strand, 8587112 - 8587027
Alignment:
Q  15 gacaccagacacaacacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 101  Q
    |||||| ||||  |||||||||| |||||||||||||| ||| | ||||  |||||||||||||||||| ||| |||||||||||||    
T  8587112 gacaccggacatgacacggacactgacacgccgacacatctagtaatttg-aaaaaatcacataattaagtgtaattacaagtgtcg 8587027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 15 - 101
Target Start/End: Original strand, 28917969 - 28918054
Alignment:
Q  15 gacaccagacacaacacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 101  Q
    |||||| ||||| ||||||| || |||||||||||| |||||| || ||| |||||||||||||||| | ||| |||||||||||||    
T  28917969 gacaccggacacgacacggaaactgacacgccgacatagctaa-taatttgaaaaaatcacataattcagtgtaattacaagtgtcg 28918054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 33 - 96
Target Start/End: Original strand, 14747547 - 14747610
Alignment:
Q  33 gacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaag 96  Q
    ||||| |||||||||||||||||||| ||||  |||||||||||||||| | ||| ||||||||    
T  14747547 gacactgacacgccgacacagctaataatttgaaaaaaatcacataatttagtgtaattacaag 14747610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 15 - 105
Target Start/End: Complemental strand, 35994828 - 35994740
Alignment:
Q  15 gacaccagacacaacacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcgtgtc 105  Q
    |||||| ||||| ||| |||||  |||| ||||||||||||||| ||||   ||||||||||||||| | ||| |||||||||||||||||    
T  35994828 gacaccggacacgacatggacaatgacaagccgacacagctaataatttg--aaaaatcacataattcagtgtaattacaagtgtcgtgtc 35994740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 101
Target Start/End: Original strand, 55401043 - 55401128
Alignment:
Q  15 gacaccagacacaacacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 101  Q
    |||||| || || |||||||||| || ||||||||||| ||||| ||||  |||||||||||||||| | ||| |||||||||||||    
T  55401043 gacaccggatacgacacggacactgatacgccgacacaactaataatttg-aaaaaatcacataatttagtgtaattacaagtgtcg 55401128  T

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Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 34 - 99
Target Start/End: Complemental strand, 4987363 - 4987299
Alignment:
Q  34 acacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgt 99  Q
    |||| |||||||||||||||||||| ||||  |||||||||||||||| | ||| |||||||||||    
T  4987363 acactgacacgccgacacagctaataatttg-aaaaaatcacataattcagtgtaattacaagtgt 4987299  T

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Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 39 - 100
Target Start/End: Original strand, 14209105 - 14209165
Alignment:
Q  39 gacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtc 100  Q
    |||||||||||||| ||||| ||||| |||||||||||||||| | ||| ||||||||||||    
T  14209105 gacacgccgacacaactaataatttt-aaaaaatcacataattcagtgtaattacaagtgtc 14209165  T

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Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 32 - 100
Target Start/End: Complemental strand, 10268560 - 10268493
Alignment:
Q  32 ggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtc 100  Q
    |||||| ||||||||||||||| |||| ||||  |||||||||||||||| | ||| ||||||||||||    
T  10268560 ggacactgacacgccgacacagttaataatttg-aaaaaatcacataatttagtgtaattacaagtgtc 10268493  T

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Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 20 - 100
Target Start/End: Original strand, 14216865 - 14216944
Alignment:
Q  20 cagacacaacacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtc 100  Q
    ||||||| |||||||||| |||||| ||||||| ||||| ||||| |||| |||| |||||| | ||| ||||||||||||    
T  14216865 cagacacgacacggacactgacacgtcgacacaactaataatttt-aaaatatcatataattcagtgtaattacaagtgtc 14216944  T

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Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 20 - 100
Target Start/End: Original strand, 14222994 - 14223073
Alignment:
Q  20 cagacacaacacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtc 100  Q
    ||||||| |||||||||| |||||| ||||||| ||||| ||||| |||| |||| |||||| | ||| ||||||||||||    
T  14222994 cagacacgacacggacactgacacgtcgacacaactaataatttt-aaaatatcatataattcagtgtaattacaagtgtc 14223073  T

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Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 33 - 101
Target Start/End: Original strand, 35222924 - 35222991
Alignment:
Q  33 gacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 101  Q
    |||||||||||||||||||| ||||  ||||||| |||||||||||||| ||||| |||| | ||||||    
T  35222924 gacacagacacgccgacacaactaac-atttttagaaaatcacataattcaatgtaattatatgtgtcg 35222991  T

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Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 101
Target Start/End: Original strand, 14829658 - 14829742
Alignment:
Q  15 gacaccagacacaacacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 101  Q
    |||||| ||||  |||| ||||| |||||||||||||||||||| |  ||| ||||||||||||||| |  || |||||||||||||    
T  14829658 gacaccggacatgacacagacactgacacgccgacacagctaataa--tttgaaaaatcacataattcatggtaattacaagtgtcg 14829742  T

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Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 29 - 100
Target Start/End: Original strand, 14832081 - 14832151
Alignment:
Q  29 cacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtc 100  Q
    |||||| || |||||||||| ||||||||| ||||  |||||||||||||| | ||||| ||||||||||||    
T  14832081 cacggatacggacacgccgatacagctaataatttg-aaaaaatcacataactcaatgtaattacaagtgtc 14832151  T

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Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 15 - 101
Target Start/End: Complemental strand, 10335377 - 10335292
Alignment:
Q  15 gacaccagacacaacacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 101  Q
    |||||| ||||| |||||||||| |||||||||||||| |||| || ||| ||||| ||||||| || | ||| | |||||||||||    
T  10335377 gacaccggacacgacacggacactgacacgccgacacaactaa-taatttgaaaaagtcacatattttagtgtaaatacaagtgtcg 10335292  T

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Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 15 - 101
Target Start/End: Complemental strand, 15796385 - 15796300
Alignment:
Q  15 gacaccagacacaacacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 101  Q
    |||||| ||||| |||||||||  ||||||||||||||| ||| || ||| ||||||||| |||||| | ||| ||||||| |||||    
T  15796385 gacaccggacacgacacggacaatgacacgccgacacagttaa-taatttgaaaaaatcatataattcagtgtaattacaattgtcg 15796300  T

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Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 39 - 101
Target Start/End: Original strand, 26508102 - 26508163
Alignment:
Q  39 gacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 101  Q
    ||||||| |||||||||||| ||||  |||||||||||||||| | ||| |||||||||||||    
T  26508102 gacacgctgacacagctaataatttg-aaaaaatcacataattcagtgtaattacaagtgtcg 26508163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 10954933 - 10955005
Alignment:
Q  28 acacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 101  Q
    ||||| |||| |||||||||||||| |||| || ||| |||||||||||||||| | ||| || ||||||||||    
T  10954933 acacgaacactgacacgccgacacaactaa-taatttgaaaaaatcacataattcagtgtaatcacaagtgtcg 10955005  T

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Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 100
Target Start/End: Original strand, 11610489 - 11610573
Alignment:
Q  15 gacaccagacacaacacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtc 100  Q
    |||| |||||||||||| || || |||||||| |||| ||||| || ||| |||||||||||||||| | |||  |||||||||||    
T  11610489 gacatcagacacaacacagatactgacacgccaacaccgctaa-taatttaaaaaaatcacataattcagtgtagttacaagtgtc 11610573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 40 - 92
Target Start/End: Original strand, 21305238 - 21305290
Alignment:
Q  40 acacgccgacacagctaattatttttaaaaaatcacataattaaatgtgatta 92  Q
    ||||||||||||  ||||| ||||  |||||||||||||||||||||| ||||    
T  21305238 acacgccgacacctctaataatttgaaaaaaatcacataattaaatgtaatta 21305290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 33 - 101
Target Start/End: Original strand, 21479104 - 21479171
Alignment:
Q  33 gacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 101  Q
    ||||| ||||||||||||||||||| || ||| ||||||||||| |||| | ||| ||||| |||||||    
T  21479104 gacactgacacgccgacacagctaa-taatttgaaaaaatcacacaattcagtgtaattactagtgtcg 21479171  T

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Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 33 - 81
Target Start/End: Original strand, 40052318 - 40052365
Alignment:
Q  33 gacacagacacgccgacacagctaattatttttaaaaaatcacataatt 81  Q
    ||||| ||||||||||||||||||| || ||| ||||||||||||||||    
T  40052318 gacactgacacgccgacacagctaa-taatttgaaaaaatcacataatt 40052365  T

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Target: scaffold0053 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 15 - 101
Target Start/End: Original strand, 8766 - 8851
Alignment:
Q  15 gacaccagacacaacacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 101  Q
    |||||| ||||| |||||||||| ||||||||||||||||||| || ||| ||||||||| || ||| | ||| |||||||||||||    
T  8766 gacaccggacacgacacggacactgacacgccgacacagctaa-taatttgaaaaaatcatattatttagtgtaattacaagtgtcg 8851  T

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Target: scaffold0021 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 101
Target Start/End: Original strand, 130450 - 130535
Alignment:
Q  15 gacaccagacacaacacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 101  Q
    |||||| ||||| |||||||||  |||| |||||||||| |||| | ||| |||||||||||||||| | ||| |||||||||||||    
T  130450 gacaccggacacgacacggacaatgacaagccgacacagttaat-agtttgaaaaaatcacataattcagtgtaattacaagtgtcg 130535  T

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Target: scaffold0018 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 100
Target Start/End: Complemental strand, 178910 - 178825
Alignment:
Q  15 gacaccagacacaacacggacacagacacgccgacacagctaattatttttaaaaaatca-cataattaaatgtgattacaagtgtc 100  Q
    |||||| ||||| |||||||||| |||||||||||||| |||| || ||| ||||||||| ||||||| | ||| ||||||||||||    
T  178910 gacaccggacacgacacggacactgacacgccgacacaactaa-taatttgaaaaaatcatcataattcagtgtaattacaagtgtc 178825  T

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Target: scaffold0003 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 81
Target Start/End: Original strand, 241562 - 241627
Alignment:
Q  15 gacaccagacacaacacggacacagacacgccgacacagctaattatttttaaaaaatcacataatt 81  Q
    |||||| ||||| |||||||||| ||||||||||||||||||| || |||  |||||||||||||||    
T  241562 gacaccggacacgacacggacactgacacgccgacacagctaa-taatttggaaaaatcacataatt 241627  T

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Target: scaffold0007 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 15 - 104
Target Start/End: Complemental strand, 225359 - 225271
Alignment:
Q  15 gacaccagacacaacacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcgtgt 104  Q
    |||||| ||||| |||||||||| ||||||||||||||| ||| || ||| | ||||| |||||||  ||||| |||| |||||||||||    
T  225359 gacaccggacacgacacggacactgacacgccgacacagataa-taatttgagaaaatgacataatacaatgtaattataagtgtcgtgt 225271  T

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Target: scaffold0793 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 40 - 99
Target Start/End: Complemental strand, 4950 - 4891
Alignment:
Q  40 acacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgt 99  Q
    |||| |||||||||||||| ||||  |||||||||||||||| | ||| |||||||||||    
T  4950 acacaccgacacagctaataatttaaaaaaaatcacataattcagtgtaattacaagtgt 4891  T

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Target: scaffold0116 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 74
Target Start/End: Original strand, 9866 - 9924
Alignment:
Q  15 gacaccagacacaacacggacacagacacgccgacacagctaattatttttaaaaaatca 74  Q
    |||||| ||||| ||| |||||| ||||||||||||||||||||| |||||| |||||||    
T  9866 gacaccggacacgacatggacaccgacacgccgacacagctaatt-tttttagaaaatca 9924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 22 - 101
Target Start/End: Complemental strand, 45615 - 45536
Alignment:
Q  22 gacacaacacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 101  Q
    |||||||||||||||| |||||| |||||||  ||||||| |  ||||||  |||||||| | ||| |||||||||||||    
T  45615 gacacaacacggacactgacacgtcgacacaattaattatctaaaaaaaaatacataattcagtgtaattacaagtgtcg 45536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 22 - 101
Target Start/End: Original strand, 46657 - 46735
Alignment:
Q  22 gacacaacacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 101  Q
    ||||| |||||||||  ||||||||||||||| ||| || ||| |||||||||||||||| | ||| ||||||| |||||    
T  46657 gacacgacacggacaatgacacgccgacacagttaa-taatttgaaaaaatcacataattcagtgtaattacaaatgtcg 46735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 105
Target Start/End: Complemental strand, 33433 - 33366
Alignment:
Q  36 acagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcgtgtc 105  Q
    |||||||||||||||||||||| || ||| ||||||| |||||||| | ||| ||||||| |||||||||    
T  33433 acagacacgccgacacagctaa-taatttgaaaaaataacataattcagtgtaattacaa-tgtcgtgtc 33366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 29 - 101
Target Start/End: Complemental strand, 539 - 468
Alignment:
Q  29 cacggacacagacacgccgacacagctaattatttttaaaaaatcacataattaaatgtgattacaagtgtcg 101  Q
    ||||||||| || |||||||||| |||||| ||||  ||||||||||| |||| | ||| |||||||||||||    
T  539 cacggacactgatacgccgacactgctaataatttg-aaaaaatcacaaaattcagtgtaattacaagtgtcg 468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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