View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10071_low_2 (Length: 516)
Name: NF10071_low_2
Description: NF10071
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10071_low_2 |
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Alignment Details
Target: chr7 (Bit Score: 491; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 491; E-Value: 0
Query Start/End: Original strand, 1 - 503
Target Start/End: Original strand, 42406796 - 42407298
Alignment:
| Q |
1 |
aatctcacaagtaacatcagaaagctgacatcccaattcaatcatctcataaaccatcccaatcccttcatcaactctacattccctaaacaacccttta |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42406796 |
aatctcacaagtaacatcagaaagctgacatcccaattcaatcatctcataaaccatcccaatcccttcatcaactctacattccctaaacaacccttta |
42406895 |
T |
|
| Q |
101 |
atcaaagtattaaaagtaacaacatttggatgacaccccattttcctcatttcatcaaacatctccaatgcaaaaccaaatttaaaatccctacaataac |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42406896 |
atcaaagtattaaaagtaacaacatttggatgacaccccattttcctcatttcatcaaacatctccaatgcaaaaccaaatttaaaatccctacaataac |
42406995 |
T |
|
| Q |
201 |
cactaatcaaaatattaaaagtaaacacatcaggtttaatcctacccttaaccatctgattataaaactcaaaagctctatcaaatctaccagatttaac |
300 |
Q |
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|||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42406996 |
cactaatcaaaatattaaaagtaaacacatcaggcttaatcctatccttaaccatctgattataaaactcaaaagctctatcaaatctaccagatttaac |
42407095 |
T |
|
| Q |
301 |
aaacccatgaatcaaaatattacaaaccgaaacactcggttttccgtcaattaacctacgcataacattaaaagcataaacagcatcatcaaatttgaaa |
400 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
42407096 |
aaacccatgaatcaaaatattacaaaccgaaacactcggttttccgtcaattaacctgcgcataacattaaaagcataaacagcatcatcaaatttgaaa |
42407195 |
T |
|
| Q |
401 |
gctttacagtaatactgaattgcaaaacggaaaatgggttcggtttgtgggcaagagaagatggcttgagagcattggcaggggttggtggagatgaaag |
500 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42407196 |
gctttacagtaatactgaattgcaaaacggaaaatgggttcggtttgtgggcaagagaagatggcttgagagcattggcaggggttggtggagatgaaag |
42407295 |
T |
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| Q |
501 |
tga |
503 |
Q |
| |
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||| |
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| T |
42407296 |
tga |
42407298 |
T |
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