View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10074_low_2 (Length: 571)
Name: NF10074_low_2
Description: NF10074
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10074_low_2 |
 | |
|
| [»] scaffold0667 (3 HSPs) |
| | |
|
Alignment Details
Target: chr1 (Bit Score: 508; Significance: 0; HSPs: 7)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 508; E-Value: 0
Query Start/End: Original strand, 18 - 561
Target Start/End: Complemental strand, 29423481 - 29422938
Alignment:
| Q |
18 |
tttcaatgaggttccttttcctgcaattggtgaagaagtgaatagtgagagttttgaaattggtgttgcggttctggaagggtgtctttgtatgactgtg |
117 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
29423481 |
tttcaatgaggttccttttcctgaaattggtgaagaagtgaatagtgagagttttgaaattggtgttgcggttctggaagggtgcctttgtatgactgtg |
29423382 |
T |
|
| Q |
118 |
aattatcaaactgttaacattgatgtttggatgatgaaagaatatggatgtagagatagctggtgtaaactttttactttggcagaatcgtgtttcacct |
217 |
Q |
| |
|
||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29423381 |
aattatcaaactgttaaaattgatgtttggctgatgaaagaatatggatgtagagatagctggtgtaaactttttactttggcagaatcgtgtttcacct |
29423282 |
T |
|
| Q |
218 |
tacctttgaaagctttgaggcttttagcttattcgagcgatggaagtatggttctgttgcaagtagatcctgagaagctgttttggtatgatctcaagag |
317 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29423281 |
tacctttgaaagctttgaggcttttagcttattcgagcgatggaggtatggttctgttgcaagtagatcctgagaagctgttttggtatgatctcaagag |
29423182 |
T |
|
| Q |
318 |
tgaacaagttagttgtgttcaaggaattcctaatttcgatcaagccatgatttgtgttggaagtcttgtatcaccttccttcgctaggaaggagaatcgc |
417 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
29423181 |
tgaacaagttagttgtgttcaaggaattcctaatttcgatcaagccatgatttgtgttggaagtcttgtatcaccttccttccctaggaaggagaatcgc |
29423082 |
T |
|
| Q |
418 |
acaagcaagaaaaggtacttcttattgattatcaattcaatggaccgatcatatgatatatctatttaaactctgttaaaaggtcaaattgaattcttat |
517 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
29423081 |
acaagcaagagaaggtacttcttattgattatcaattcaatggaccgatcatatgatatatctagttaaactctgttaaaaggtcaaattgaattcttat |
29422982 |
T |
|
| Q |
518 |
tatacgacaatgattctctaattattttgaagtctctacctttg |
561 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29422981 |
tatatgacaatgattctctaattattttgaagtctctacctttg |
29422938 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 313; E-Value: 1e-176
Query Start/End: Original strand, 18 - 450
Target Start/End: Original strand, 29453230 - 29453662
Alignment:
| Q |
18 |
tttcaatgaggttccttttcctgcaattggtgaagaagtgaatagtgagagttttgaaattggtgttgcggttctggaagggtgtctttgtatgactgtg |
117 |
Q |
| |
|
||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| |
|
|
| T |
29453230 |
tttcaatgaggttccttttcctgaaataggtgaagaagtgaatagtgagagttttgaaattggtgttgcggttttggaagggtgtctttgtatgattgtg |
29453329 |
T |
|
| Q |
118 |
aattatcaaactgttaacattgatgtttggatgatgaaagaatatggatgtagagatagctggtgtaaactttttactttggcagaatcgtgtttcacct |
217 |
Q |
| |
|
||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| ||||||| | |
|
|
| T |
29453330 |
aattatcaaactgttaaaattgatgtttgggtgatgaaagaatatggatgtagagatagctggtgtgaactttttactttggcggaatcatgtttcattt |
29453429 |
T |
|
| Q |
218 |
tacctttgaaagctttgaggcttttagcttattcgagcgatggaagtatggttctgttgcaagtagatcctgagaagctgttttggtatgatctcaagag |
317 |
Q |
| |
|
||||||||||| ||||| ||| ||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
29453430 |
tacctttgaaaactttgtggcctttagcttattcgagcgatggaagtatggttctgttggaagtagattgtgagaagctgttttggtatgatctcaagag |
29453529 |
T |
|
| Q |
318 |
tgaacaagttagttgtgttcaaggaattcctaatttcgatcaagccatgatttgtgttggaagtcttgtatcaccttccttcgctaggaaggagaatcgc |
417 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| | ||||| |||||| |
|
|
| T |
29453530 |
tgaacaagttagttgtgttgaaggaattcctaatttcgatcaagctatgatttgtgttggaagtcttgtgccaccttccttccccaggaaagagaattat |
29453629 |
T |
|
| Q |
418 |
acaagcaagaaaaggtacttcttattgattatc |
450 |
Q |
| |
|
|||||||||| |||||||| |||||| |||||| |
|
|
| T |
29453630 |
acaagcaagagaaggtactccttatttattatc |
29453662 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 18 - 448
Target Start/End: Original strand, 29443247 - 29443677
Alignment:
| Q |
18 |
tttcaatgaggttccttttcctgcaattggtgaagaagtgaatagtgagagttttgaaattggtgttgcggttctggaagggtgtctttgtatgactgtg |
117 |
Q |
| |
|
||||||||||||||||||||||| ||| |||||||| || ||||||||||||||| |||||||| || ||||||||||||||||||||||||||| |||| |
|
|
| T |
29443247 |
tttcaatgaggttccttttcctgaaataggtgaagatgttaatagtgagagttttcaaattggtatttcggttctggaagggtgtctttgtatgattgtg |
29443346 |
T |
|
| Q |
118 |
aattatcaaactgttaacattgatgtttggatgatgaaagaatatggatgtagagatagctggtgtaaactttttactttggcagaatcgtgtttcacct |
217 |
Q |
| |
|
||||||||||||| ||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | |
|
|
| T |
29443347 |
aattatcaaactgctaaaattgatgtttgggtgatgaaagaatatggatgtagagatagctggtgtaaactttttactttggctgaatcgtgtttcagtt |
29443446 |
T |
|
| Q |
218 |
tacctttgaaagctttgaggcttttagcttattcgagcgatggaagtatggttctgttgcaagtagatcctgagaagctgttttggtatgatctcaagag |
317 |
Q |
| |
|
||||||||| |||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
29443447 |
tacctttgagagctttgaggattttaggttattcgagcgatagaagtatggttctgttgcaagtagatcgtgagaagctgttttggtatgatctcaagag |
29443546 |
T |
|
| Q |
318 |
tgaacaagttagttgtgttcaaggaattcctaatttcgatcaagccatgatttgtgttggaagtcttgtatcaccttccttcgctaggaaggagaatcgc |
417 |
Q |
| |
|
|||| ||||||| |||| |||||||||||| | ||||| ||||| ||||||||||||||||||||| |||||| ||| | ||||||||||||| |
|
|
| T |
29443547 |
tgaatgtgttagttatgttgaaggaattcctagggtggatcatgccatcatttgtgttggaagtcttgtacaaccttctttccccaggaaggagaatcaa |
29443646 |
T |
|
| Q |
418 |
acaagcaagaaaaggtacttcttattgatta |
448 |
Q |
| |
|
|||||||||| |||||||||||||||||||| |
|
|
| T |
29443647 |
acaagcaagagaaggtacttcttattgatta |
29443677 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 18 - 447
Target Start/End: Original strand, 29467706 - 29468135
Alignment:
| Q |
18 |
tttcaatgaggttccttttcctgcaattggtgaagaagtgaatagtgagagttttgaaattggtgttgcggttctggaagggtgtctttgtatgactgtg |
117 |
Q |
| |
|
|||||||||||||||| |||||| ||| ||| | ||||| ||| |||||||||| |||||| |||||||||| ||| ||||||||||| ||| |||| |
|
|
| T |
29467706 |
tttcaatgaggttcctcttcctgaaataggttatgaagttaatgttgagagttttaaaattgatgttgcggttttgggagggtgtctttagttgattgtg |
29467805 |
T |
|
| Q |
118 |
aattatcaaactgttaacattgatgtttggatgatgaaagaatatggatgtagagatagctggtgtaaactttttactttggcagaatcgtgtttcacct |
217 |
Q |
| |
|
|||||||||||| ||| |||||||||||| |||||||||||||||||||||||||||| ||| |||||||||||||||||| |||||||||||| | |
|
|
| T |
29467806 |
aattatcaaactagtaaaattgatgtttggttgatgaaagaatatggatgtagagatagttggcgtaaactttttactttggttagatcgtgtttcactt |
29467905 |
T |
|
| Q |
218 |
tacctttgaaagctttgaggcttttagcttattcgagcgatggaagtatggttctgttgcaagtagatcctgagaagctgttttggtatgatctcaagag |
317 |
Q |
| |
|
||| ||| || ||||||||| ||||| |||||||||||||||||||||||||||||| ||||||| | ||||||| |||||||||||||||||||||| |
|
|
| T |
29467906 |
tacagttggaatctttgaggcctttaggttattcgagcgatggaagtatggttctgtttgaagtagaccatgagaagttgttttggtatgatctcaagag |
29468005 |
T |
|
| Q |
318 |
tgaacaagttagttgtgttcaaggaattcctaatttcgatcaagccatgatttgtgttggaagtcttgtatcaccttccttcgctaggaaggagaatcgc |
417 |
Q |
| |
|
|||||| |||| || |||| |||||||||||||||| || |||| |||||||||||||||||||||||| ||||||||||| ||||||| ||||||||| |
|
|
| T |
29468006 |
tgaacatgttaattatgttgaaggaattcctaatttgaatgaagctatgatttgtgttggaagtcttgtaccaccttccttccctaggaacgagaatcgc |
29468105 |
T |
|
| Q |
418 |
acaagcaagaaaaggtacttcttattgatt |
447 |
Q |
| |
|
|||||||||| ||||||||||||||||||| |
|
|
| T |
29468106 |
acaagcaagagaaggtacttcttattgatt |
29468135 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 447 - 561
Target Start/End: Original strand, 29443705 - 29443828
Alignment:
| Q |
447 |
tatcaattcaatggaccgatcatatgatatatctatttaaactc--tgttaaaaggtcaaat-------tgaattcttattatacgacaatgattctcta |
537 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||||||| ||||||||||| ||| ||||| ||||||||| |
|
|
| T |
29443705 |
tatcaattcaatggacccatcatatgatatatctagttaaactccatgttaaaaggtcaaattgaattctgaattcttatcataggacaaggattctcta |
29443804 |
T |
|
| Q |
538 |
attattttgaagtctctacctttg |
561 |
Q |
| |
|
|||||||||||||||||||||||| |
|
|
| T |
29443805 |
attattttgaagtctctacctttg |
29443828 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 468 - 544
Target Start/End: Original strand, 29468200 - 29468276
Alignment:
| Q |
468 |
atatgatatatctatttaaactctgttaaaaggtcaaattgaattcttattatacgacaatgattctctaattattt |
544 |
Q |
| |
|
||||||||||| | ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
29468200 |
atatgatatatgcagttaaactctgttaaaaggtcaaattgaattcttattataggacaatgattctctaattattt |
29468276 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 503 - 558
Target Start/End: Original strand, 29453744 - 29453799
Alignment:
| Q |
503 |
aaattgaattcttattatacgacaatgattctctaattattttgaagtctctacct |
558 |
Q |
| |
|
||||||||||||||||||| |||| ||||||||||||| |||||||||||||||| |
|
|
| T |
29453744 |
aaattgaattcttattatagaacaaggattctctaattactttgaagtctctacct |
29453799 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 120; Significance: 4e-61; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 69 - 399
Target Start/End: Original strand, 41966682 - 41967015
Alignment:
| Q |
69 |
ttttgaaattggtgttgcggttctggaagggtgtctttgtatgactgtgaattatcaaactgttaacattgatgtttggatgatgaaagaatatggatgt |
168 |
Q |
| |
|
|||||||||| |||| | ||| ||| |||||||||||||||| |||| ||||||||||| | ||||||||||| |||||||||||||| ||| | |
|
|
| T |
41966682 |
ttttgaaatttctgtttctgttttgggagggtgtctttgtatggttgtggattatcaaactagcgatgttgatgtttgggtgatgaaagaatatcgatct |
41966781 |
T |
|
| Q |
169 |
agagatagctggtgtaaactttttactttggcagaatcgtgtttcaccttacctttgaaagctttgaggcttttagcttattcgagcgatggaagtatgg |
268 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||| |||||||| | | |||||||| | ||| || |||||| || ||| ||||||||||| | || |
|
|
| T |
41966782 |
agagatagctggtgtaaactttttactttggttaaatcttgtttcacttcatctttgaaatccttgggggttttaggttgttctagcgatggaaggaagg |
41966881 |
T |
|
| Q |
269 |
ttctgttgcaagtagatcctga---gaagctgttttggtatgatctcaagagtgaacaagttagttgtgttcaaggaattcctaatttcgatcaagccat |
365 |
Q |
| |
|
|||||||||||| | | ||| ||| ||||||||||||||| | |||||||||||| ||| || |||| |||||||||||||||| ||| ||||||| |
|
|
| T |
41966882 |
ttctgttgcaaggaattaatgatttgaaactgttttggtatgatttgaagagtgaacaaattacttatgttgaaggaattcctaattttgatgaagccat |
41966981 |
T |
|
| Q |
366 |
gatttgtgttggaagtcttgtatcaccttccttc |
399 |
Q |
| |
|
| |||||||||||||||||||| ||||||||||| |
|
|
| T |
41966982 |
gttttgtgttggaagtcttgtaccaccttccttc |
41967015 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 455 - 561
Target Start/End: Original strand, 41967132 - 41967239
Alignment:
| Q |
455 |
caatggaccgatcatatgatatatctatttaaactctgt-taaaaggtcaaattgaattcttattatacgacaatgattctctaattattttgaagtctc |
553 |
Q |
| |
|
||||||||| |||||| ||| || || ||||||||| | | |||||| ||||||||||||||||||| || || |||||||||||| || |||| || |
|
|
| T |
41967132 |
caatggacccatcatacaatacatgtacttaaactctatgttaaaggttaaattgaattcttattataggataactattctctaattacttcgaaggctt |
41967231 |
T |
|
| Q |
554 |
tacctttg |
561 |
Q |
| |
|
|||||||| |
|
|
| T |
41967232 |
tacctttg |
41967239 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 120; Significance: 4e-61; HSPs: 47)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 58 - 399
Target Start/End: Original strand, 11987456 - 11987794
Alignment:
| Q |
58 |
aatagtgagagttttgaaattggtgttgcggttctggaagggtgtctttgtatgactgtgaattatcaaactgttaacattgatgtttggatgatgaaag |
157 |
Q |
| |
|
||||||| ||||||||||||| |||||| ||| ||| ||||||||||||| ||||||||||| |||| ||| || |||||| ||||| ||||||||| |
|
|
| T |
11987456 |
aatagtgcaagttttgaaattgatgttgctgttttgggagggtgtctttgtttgactgtgaatcatcatact---aagattgatatttgggtgatgaaag |
11987552 |
T |
|
| Q |
158 |
aatatggatgtagagatagctggtgtaaactttttactttggcagaatcgtgtttcaccttacctttgaaagctttgaggcttttagcttattcgagcga |
257 |
Q |
| |
|
||||||||||||||||||| |||||||||||||| || ||| |||||||||||| |||||||||||| ||||||| | ||| | ||||||||| || |
|
|
| T |
11987553 |
aatatggatgtagagatagttggtgtaaacttttcacattgatggaatcgtgtttcgttttacctttgaaatctttgagccctttgggttattcgagtga |
11987652 |
T |
|
| Q |
258 |
tggaagtatggttctgttgcaagtagatcctgagaagctgttttggtatgatctcaagagtgaacaagttagttgtgttcaaggaattcctaatttcgat |
357 |
Q |
| |
|
||| | | |||| ||||| | | ||| |||||||| ||||||||||| | |||||||||||| |||||| |||| | ||||||||||| |||||| |
|
|
| T |
11987653 |
tggtaaaaaggttttgttggatcttaatcacaagaagctggtttggtatgatttgaagagtgaacaatttagttatgttgacggaattcctaaattcgat |
11987752 |
T |
|
| Q |
358 |
caagccatgatttgtgttggaagtcttgtatcaccttccttc |
399 |
Q |
| |
|
|||| |||||||||||||||||||||||| |||| |||||| |
|
|
| T |
11987753 |
gaagctatgatttgtgttggaagtcttgtaccaccctccttc |
11987794 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 65 - 399
Target Start/End: Complemental strand, 9328768 - 9328434
Alignment:
| Q |
65 |
agagttttgaaattggtgttgcggttctggaagggtgtctttgtatgactgtgaattatcaaactgttaacattgatgtttggatgatgaaagaatatgg |
164 |
Q |
| |
|
||||||||||||||| ||||| ||| ||| |||||||||||| |||||| |||||||| ||||| | | |||||||||||| |||||||| ||||||| |
|
|
| T |
9328768 |
agagttttgaaattgatgttgatgttttgggagggtgtctttgcatgactttgaattatgaaactactgaaattgatgtttgggtgatgaaacaatatgg |
9328669 |
T |
|
| Q |
165 |
atgtagagatagctggtgtaaactttttactttggcagaatcgtgtttcaccttacctttgaaagctttgaggcttttagcttattcgagcgatggaagt |
264 |
Q |
| |
|
|| ||||||||| |||||||||||||||||| ||| ||||||||||| |||||||||||| ||||||||| ||||| ||||| ||| ||||||| |
|
|
| T |
9328668 |
atatagagatagttggtgtaaactttttactatggttaaatcgtgtttccatttacctttgaaatctttgaggcctttaggttatttgagtgatggaaaa |
9328569 |
T |
|
| Q |
265 |
atggttctgttgcaagtagatcctgagaagctgttttggtatgatctcaagagtgaacaagttagttgtgttcaaggaattcctaatttcgatcaagcca |
364 |
Q |
| |
|
| |||| ||||| || ||| |||||||||||||| ||||||| | | ||||| ||||||||||| |||| ||||||||||| ||||| || | | | |
|
|
| T |
9328568 |
aaggttttgttgagggtggattttgagaagctgtttttgtatgattttaggagtgcacaagttagttatgttgaaggaattcctgatttccatgatgtta |
9328469 |
T |
|
| Q |
365 |
tgatttgtgttggaagtcttgtatcaccttccttc |
399 |
Q |
| |
|
|| ||| |||||||||||||||| ||||||||||| |
|
|
| T |
9328468 |
tgttttctgttggaagtcttgtaccaccttccttc |
9328434 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 100 - 399
Target Start/End: Original strand, 9284198 - 9284497
Alignment:
| Q |
100 |
tgtctttgtatgactgtgaattatcaaactgttaacattgatgtttggatgatgaaagaatatggatgtagagatagctggtgtaaactttttactttgg |
199 |
Q |
| |
|
|||||| |||||| |||||||||||||||| ||| ||||| |||||| |||||||||||||||| | ||||||||| ||||||||| |||||||||||| |
|
|
| T |
9284198 |
tgtcttagtatgattgtgaattatcaaactactaaaattgacgtttgggtgatgaaagaatatggttctagagatagttggtgtaaaatttttactttgg |
9284297 |
T |
|
| Q |
200 |
cagaatcgtgtttcaccttacctttgaaagctttgaggcttttagcttattcgagcgatggaagtatggttctgttgcaagtagatcctgagaagctgtt |
299 |
Q |
| |
|
|||| | ||||| |||| ||||||| ||||||||| ||||| |||||| || ||||| |||| |||||| || || ||||| | |||||||| | |
|
|
| T |
9284298 |
ttaaatcacggttcactttacgtttgaaatctttgaggcctttaggttattctagtgatggtagtaaggttctattagaaatagattgtaagaagctggt |
9284397 |
T |
|
| Q |
300 |
ttggtatgatctcaagagtgaacaagttagttgtgttcaaggaattcctaatttcgatcaagccatgatttgtgttggaagtcttgtatcaccttccttc |
399 |
Q |
| |
|
|||||||||| | |||||||| ||||||| || |||| |||||||||||||||| ||| |||| ||||||||||||| ||||||||| ||||||||||| |
|
|
| T |
9284398 |
ttggtatgatttgaagagtgagcaagttatttatgttgaaggaattcctaatttggatgaagctatgatttgtgttgaaagtcttgtgccaccttccttc |
9284497 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 63 - 399
Target Start/End: Complemental strand, 9321150 - 9320817
Alignment:
| Q |
63 |
tgagagttttgaaattggtgttgcggttctggaagggtgtctttgtatgactgtgaattatcaaactgttaacattgatgtttggatgatgaaagaatat |
162 |
Q |
| |
|
||||||||||||||||| ||||| ||| ||| |||||||||||| |||||| |||| ||||| || ||||||||||| |||||||||||||| |
|
|
| T |
9321150 |
tgagagttttgaaattgatgttgatgttttgggagggtgtctttgcatgactt---attacgaaactacaaaagttgatgtttgggtgatgaaagaatat |
9321054 |
T |
|
| Q |
163 |
ggatgtagagatagctggtgtaaactttttactttggcagaatcgtgtttcaccttacctttgaaagctttgaggcttttagcttattcgagcgatggaa |
262 |
Q |
| |
|
|| | ||||||||| |||||||||||||||||| ||| ||||||||| | |||||||||||| ||||||||| ||||| ||||||||| ||||||| |
|
|
| T |
9321053 |
ggttctagagatagttggtgtaaactttttactatggttaaatcgtgttacgatttacctttgaaatctttgaggcctttaggttattcgagtgatggaa |
9320954 |
T |
|
| Q |
263 |
gtatggttctgttgcaagtagatcctgagaagctgttttggtatgatctcaagagtgaacaagttagttgtgttcaaggaattcctaatttcgatcaagc |
362 |
Q |
| |
|
| |||| ||||| |||||| ||||||||||||||||||||||| | ||||||| ||||||||||| |||| ||||||||||| ||||| || || |
|
|
| T |
9320953 |
aaaaggttttgttgagggtagatgctgagaagctgttttggtatgatttgaagagtgcacaagttagttatgttgaaggaattcctgatttccatggagt |
9320854 |
T |
|
| Q |
363 |
catgatttgtgttggaagtcttgtatcaccttccttc |
399 |
Q |
| |
|
||| ||||||||||||||||||| ||||||||||| |
|
|
| T |
9320853 |
tatgttttgtgttggaagtcttgtcccaccttccttc |
9320817 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 49 - 399
Target Start/End: Complemental strand, 10353294 - 10352944
Alignment:
| Q |
49 |
gaagaagtgaatagtgagagttttgaaattggtgttgcggttctggaagggtgtctttgtatgactgtgaattatcaaactgttaacattgatgtttgga |
148 |
Q |
| |
|
|||||||| |||||| |||||||| ||||| ||||||| | | | | ||||||||||||||||| |||| ||||| || | ||| |||||||||||| |
|
|
| T |
10353294 |
gaagaagttaatagtaagagttttaaaattcgtgttgctgctttaggagggtgtctttgtatgattgtggattataaagatactaaaattgatgtttggg |
10353195 |
T |
|
| Q |
149 |
tgatgaaagaatatggatgtagagatagctggtgtaaactttttactttggcagaatcgtgtttcaccttacctttgaaagctttgaggcttttagctta |
248 |
Q |
| |
|
||||||||||||||||||||||||| || |||||||||||||||||| ||| |||| | |||| ||||||||| || ||||||||||||||| ||| |
|
|
| T |
10353194 |
tgatgaaagaatatggatgtagagagagttggtgtaaactttttactgtggttaaatcttctttcgatttacctttgcaatctttgaggcttttaggtta |
10353095 |
T |
|
| Q |
249 |
ttcgagcgatggaagtatggttctgttgcaagtagatcctgagaagctgttttggtatgatctcaagagtgaacaagttagttgtgttcaaggaattcct |
348 |
Q |
| |
|
|||||| ||| ||| | |||| ||||| |||||| |||||| || |||||||||||| | ||||| |||||||||||| |||||||| ||||| | |
|
|
| T |
10353094 |
ttcgagtgatagaaaaaaggttttgttgagggtagatgttgagaatctattttggtatgatttggagagtaaacaagttagttatgttcaagaaattctt |
10352995 |
T |
|
| Q |
349 |
aatttcgatcaagccatgatttgtgttggaagtcttgtatcaccttccttc |
399 |
Q |
| |
|
||||| ||| | | |||||||||||||||||||||||| |||||| |||| |
|
|
| T |
10352994 |
aatttggatgacactatgatttgtgttggaagtcttgtaccaccttacttc |
10352944 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 141 - 398
Target Start/End: Original strand, 12018937 - 12019194
Alignment:
| Q |
141 |
tgtttggatgatgaaagaatatggatgtagagatagctggtgtaaactttttactttggcagaatcgtgtttcaccttacctttgaaagctttgaggctt |
240 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||| | | |||||| | | |
|
|
| T |
12018937 |
tgtttgggtgatgaaagaatatggatgtagagatagttggtgtaaactttttactttgatggaatcgtgtttcgttttaccttttagatttttgagccct |
12019036 |
T |
|
| Q |
241 |
ttagcttattcgagcgatggaagtatggttctgttgcaagtagatcctgagaagctgttttggtatgatctcaagagtgaacaagttagttgtgttcaag |
340 |
Q |
| |
|
|||| ||||||||| ||||||| | |||| ||||| | ||| ||| | | | |||| ||||||||||| | |||||| | |||||||||| |||| ||| |
|
|
| T |
12019037 |
ttaggttattcgagtgatggaaaaaaggttttgttggatgtaaatcataatatgctggtttggtatgatttgaagagtcagcaagttagttatgttgaag |
12019136 |
T |
|
| Q |
341 |
gaattcctaatttcgatcaagccatgatttgtgttggaagtcttgtatcaccttcctt |
398 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
12019137 |
gaattcctaatttcgatgaagccatgatttgtgttggaagtcttgtaccaccttcctt |
12019194 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 61 - 395
Target Start/End: Complemental strand, 9364801 - 9364467
Alignment:
| Q |
61 |
agtgagagttttgaaattggtgttgcggttctggaagggtgtctttgtatgactgtgaattatcaaactgttaacattgatgtttggatgatgaaagaat |
160 |
Q |
| |
|
||||||||||||||||| | |||||||||| ||| |||||||||| |||||| |||||||||||||||| | | |||||||||||| |||||||||||| |
|
|
| T |
9364801 |
agtgagagttttgaaatcgatgttgcggttttgggagggtgtcttagtatgattgtgaattatcaaactactcaaattgatgtttgggtgatgaaagaat |
9364702 |
T |
|
| Q |
161 |
atggatgtagagatagctggtgtaaactttttactttgg-cagaatcgtgtttcaccttacctttgaaagctttgaggcttttagcttattcgagcgatg |
259 |
Q |
| |
|
|||||| | |||||| ||||||||| | |||||||||| || || | |||| | |||||||||| | ||||||| ||||| ||||||||| |||| |
|
|
| T |
9364701 |
atggattaaaagatagttggtgtaaattgtttactttggtgggactcttttttc-cgacacctttgaaatcgttgaggcctttaggttattcgagtgatg |
9364603 |
T |
|
| Q |
260 |
gaagtatggttctgttgcaagtagatcctgagaagctgttttggtatgatctcaagagtgaacaagttagttgtgttcaaggaattcctaatttcgatca |
359 |
Q |
| |
|
||| | |||| | ||| || |||||| | |||||||||||||||| ||||||||||||||| | |||| | |||||| ||||||||||||| | || | |
|
|
| T |
9364602 |
gaaagaaggttttattggaaatagatcgtaagaagctgttttggtacgatctcaagagtgaaaacgttactagtgttccaggaattcctaatatgaatga |
9364503 |
T |
|
| Q |
360 |
agccatgatttgtgttggaagtcttgtatcaccttc |
395 |
Q |
| |
|
||| |||||||||||||| ||||||||| ||||||| |
|
|
| T |
9364502 |
agctatgatttgtgttggtagtcttgtaccaccttc |
9364467 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 62 - 399
Target Start/End: Complemental strand, 9316185 - 9315854
Alignment:
| Q |
62 |
gtgagagttttgaaattggtgttgcggttctggaagggtgtctttgtatgactgtgaattatcaaactgttaacattgatgtttggatgatgaaagaata |
161 |
Q |
| |
|
||||||||||| |||||| |||||| ||| ||| ||||||||||||||||| | |||||||||||||| ||| | |||||||||| |||||||||| || |
|
|
| T |
9316185 |
gtgagagttttcaaattgctgttgctgttttgggagggtgtctttgtatgattttgaattatcaaactactaaaactgatgtttgggtgatgaaagacta |
9316086 |
T |
|
| Q |
162 |
tggatgtagagatagctggtgtaaactttttactttggcagaatcgtgtttcaccttacctttgaaagctttgaggcttttagcttattcgagcgatgga |
261 |
Q |
| |
|
||||| ||| |||||||||||||||||||||| | || |||||||| ||| ||||||| ||||| || ||||| |||||| || || ||| |
|
|
| T |
9316085 |
tggatctagt------tggtgtaaactttttactttggttaattcatgtttcactttatctttgaattttttgaagcctttaggttattctagtgacgga |
9315992 |
T |
|
| Q |
262 |
agtatggttctgttgcaagtagatcctgagaagctgttttggtatgatctcaagagtgaacaagttagttgtgttcaaggaattcctaatttcgatcaag |
361 |
Q |
| |
|
|||| |||||| ||| || ||||| | ||||||||||||||| ||| | | |||||||||||||| || |||| |||||||| ||||||| ||| ||| |
|
|
| T |
9315991 |
agtaaggttctattggaaatagattgtaagaagctgttttggtgtgacttgatgagtgaacaagttatttatgttgaaggaatttctaatttggatgaag |
9315892 |
T |
|
| Q |
362 |
ccatgatttgtgttggaagtcttgtatcaccttccttc |
399 |
Q |
| |
|
| ||||||||||||| |||||||||| ||||||||||| |
|
|
| T |
9315891 |
ctatgatttgtgttgaaagtcttgtaccaccttccttc |
9315854 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 63 - 398
Target Start/End: Complemental strand, 10336015 - 10335692
Alignment:
| Q |
63 |
tgagagttttgaaattggtgttgcggttctggaagggtgtctttgtatgactgtgaattatcaaactgttaacattgatgtttggatgatgaaagaatat |
162 |
Q |
| |
|
|||||||||| ||||| | |||| ||| ||| ||||||||||||| || ||||||||||||||||| ||| |||||||||||| |||||||||||||| |
|
|
| T |
10336015 |
tgagagttttaaaatttctattgctgttttgggagggtgtctttgtttgcctgtgaattatcaaactactaaaattgatgtttgggtgatgaaagaatat |
10335916 |
T |
|
| Q |
163 |
ggatgtagagatagctggtgtaaactttttactttggcagaatcgtgtttcaccttacctttgaaagctttgaggcttttagcttattcgagcgatggaa |
262 |
Q |
| |
|
|| ||||||||||| |||||||||| ||||||||||| |||||||| ||| ||| |||||||| ||||| ||||| || ||||||| |
|
|
| T |
10335915 |
ggctgtagagatagttggtgtaaacattttactttggttaaatcgtgt------ttagattt------tttgaggcctttaggttattgtagtgatggaa |
10335828 |
T |
|
| Q |
263 |
gtatggttctgttgcaagtagatcctgagaagctgttttggtatgatctcaagagtgaacaagttagttgtgttcaaggaattcctaatttcgatcaagc |
362 |
Q |
| |
|
||| |||||| ||| || | ||| | ||||| |||||||||||||| | |||||||||||| |||||| |||| |||||||||||||||| ||| | | |
|
|
| T |
10335827 |
gtaaggttctattggaaatcgattgtaagaagttgttttggtatgatttgaagagtgaacaaattagttatgttgaaggaattcctaatttggatgacac |
10335728 |
T |
|
| Q |
363 |
catgatttgtgttggaagtcttgtatcaccttcctt |
398 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||| |
|
|
| T |
10335727 |
tatgatttgtgttggaagtcttgtttcaccttcctt |
10335692 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 67 - 399
Target Start/End: Original strand, 12012521 - 12012856
Alignment:
| Q |
67 |
agttttgaaattggtgttgcggttctggaagggtgtctttgtatgactgtgaattatcaaactgttaacattgatgtttggatgatgaaagaatatggat |
166 |
Q |
| |
|
|||||||||||| |||||| | | ||| ||||||||||||||||| ||||||| |||||||| ||| |||||||| | | |||||||||||||||| | |
|
|
| T |
12012521 |
agttttgaaatttctgttgctgatttgggagggtgtctttgtatgattgtgaatcatcaaactactaagattgatgtattggtgatgaaagaatatggtt |
12012620 |
T |
|
| Q |
167 |
gtagagatagctggtgtaaactttttactttggcagaatcgtgtttcaccttacctttgaaagctttgaggcttttagcttattcgagcgatggaagtat |
266 |
Q |
| |
|
||| |||||| |||||||||||||||||||||| |||||||||||| |||||||||| | |||||| | ||| | |||||||| ||||| | || |
|
|
| T |
12012621 |
gtaaagatagttggtgtaaactttttactttggtggaatcgtgtttcgttttacctttgatatttttgagacctttgggttattcgaatgatggtaaaat |
12012720 |
T |
|
| Q |
267 |
gg------ttctgttgcaagtagatcctgagaagctgttttggtatgatctcaagagtgaacaagttagttgtgttcaaggaattcctaatttcgatcaa |
360 |
Q |
| |
|
|| || ||||| | ||| ||| | |||||||| ||||||||||| | |||||| |||||||||| |||| |||||||||||||||||||| || |
|
|
| T |
12012721 |
ggttttgtttttgttggaggtaaatcataagaagctggtttggtatgatttgaagagt---caagttagttatgttgaaggaattcctaatttcgatgaa |
12012817 |
T |
|
| Q |
361 |
gccatgatttgtgttggaagtcttgtatcaccttccttc |
399 |
Q |
| |
|
|| |||||||||||||||||||||||| |||| |||||| |
|
|
| T |
12012818 |
gctatgatttgtgttggaagtcttgtaccaccctccttc |
12012856 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 66 - 399
Target Start/End: Original strand, 9061115 - 9061466
Alignment:
| Q |
66 |
gagttttgaaattggtgttgcggttctggaagggtgtctttgtatgactgtgaattatcaaactgttaacattgatgtttggatgatgaaagaatatgga |
165 |
Q |
| |
|
||||||| ||||| ||||||| ||| ||| ||||||||||| ||| ||||||||||| || || ||| |||||||||||| |||||||||| |||||| |
|
|
| T |
9061115 |
gagttttaaaattcgtgttgctgttttgggtgggtgtctttgcatgtctgtgaattatgaagctactaaaattgatgtttgggtgatgaaagactatgga |
9061214 |
T |
|
| Q |
166 |
tgtagagatagctggtgtaaactttttactttggcagaatcgtgtttcaccttacctttgaaagctttgaggcttttagcttattcgagcgatggaagta |
265 |
Q |
| |
|
| ||||||||| |||||||||||||||||||||| |||||||||||| | ||||||| | |||||||| ||| |||||| || |||||| ||| |
|
|
| T |
9061215 |
tctagagatagttggtgtaaactttttactttggttaaatcgtgtttcaattcacctttggactttttgaggccgttatgttattctagtgatggaggta |
9061314 |
T |
|
| Q |
266 |
tggttctgttgcaagtagatcctga------------------gaagctgttttggtatgatctcaagagtgaacaagttagttgtgttcaaggaattcc |
347 |
Q |
| |
|
|||||||||| ||| | ||||| | ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| |
|
|
| T |
9061315 |
aggttctgttggaagcaaatcctaacttggataaaactcttaggaagctgttttggtatgatctcaagagtgaacaagttagttatgttgaaggaattcc |
9061414 |
T |
|
| Q |
348 |
taatttcgatcaagccatgatttgtgttggaagtcttgtatcaccttccttc |
399 |
Q |
| |
|
|||||| ||| |||| ||| ||| |||||||||||| |||||||||| |||| |
|
|
| T |
9061415 |
taattttgatgaagctatgttttatgttggaagtctcgtatcacctttcttc |
9061466 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 66 - 387
Target Start/End: Original strand, 12006092 - 12006413
Alignment:
| Q |
66 |
gagttttgaaattggtgttgcggttctggaagggtgtctttgtatgactgtgaattatcaaactgttaacattgatgtttggatgatgaaagaatatgga |
165 |
Q |
| |
|
||||||||||||| |||||| | | ||| ||||||||||||| ||| |||||||||||||||| ||| |||||||| ||| |||||||||||||||| |
|
|
| T |
12006092 |
gagttttgaaattaatgttgctgatttgggagggtgtctttgtttgattgtgaattatcaaactactaagattgatgtatgggtgatgaaagaatatggt |
12006191 |
T |
|
| Q |
166 |
tgtagagatagctggtgtaaactttttactttggcagaatcgtgtttcaccttacctttgaaagctttgaggcttttagcttattcgagcgatggaagta |
265 |
Q |
| |
|
|||| |||||| ||||||||||||||||||||| | |||||||||| |||||| ||| | |||||| | ||||| |||||| || ||||||| | |
|
|
| T |
12006192 |
tgtaaagatagttggtgtaaactttttactttgatgggatcgtgtttcgttttacctgtgatatctttgatccctttaggttattcaagtgatggaaaaa |
12006291 |
T |
|
| Q |
266 |
tggttctgttgcaagtagatcctgagaagctgttttggtatgatctcaagagtgaacaagttagttgtgttcaaggaattcctaatttcgatcaagccat |
365 |
Q |
| |
|
|| |||| | ||| ||| | |||||||| ||||||||||| | ||||||||| |||||| || || | |||||||| ||||||||| |||| || |
|
|
| T |
12006292 |
aacttttgtttgaggtaaatcataagaagctggtttggtatgatttgaagagtgaagaagttaattacattgagggaattccaaatttcgatgaagcgat |
12006391 |
T |
|
| Q |
366 |
gatttgtgttggaagtcttgta |
387 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
12006392 |
gatttgtgttggaagtcttgta |
12006413 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 18 - 276
Target Start/End: Complemental strand, 10348004 - 10347743
Alignment:
| Q |
18 |
tttcaatgaggttccttttcctgc---aattggtgaagaagtgaatagtgagagttttgaaattggtgttgcggttctggaagggtgtctttgtatgact |
114 |
Q |
| |
|
|||||||||||||||| |||||| ||| ||||||||||| ||| |||||||||||||| || |||||| ||| ||| ||||||||||||||| ||| |
|
|
| T |
10348004 |
tttcaatgaggttcctcttcctgatgaaataggtgaagaagttaatggtgagagttttgaagttcatgttgctgttttgggagggtgtctttgtatcact |
10347905 |
T |
|
| Q |
115 |
gtgaattatcaaactgttaacattgatgtttggatgatgaaagaatatggatgtagagatagctggtgtaaactttttactttggcagaatcgtgtttca |
214 |
Q |
| |
|
|| ||||| || | ||| |||||||||||| | |||||||||||||||||||||||||| |||||||||||||||||| |||| || ||||||||| |
|
|
| T |
10347904 |
gtcgattataaagatactaaaattgatgtttgggtcatgaaagaatatggatgtagagatagttggtgtaaactttttactatggctgagtcgtgtttcg |
10347805 |
T |
|
| Q |
215 |
ccttacctttgaaagctttgaggcttttagcttattcgagcgatggaagtatggttctgttg |
276 |
Q |
| |
|
|||||||||||| ||||||| || |||||| || |||||||||| |||||||||| |
|
|
| T |
10347804 |
atttacctttgaaattgttgaggcccatatgttattctagtgatggaagtaaggttctgttg |
10347743 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 46 - 199
Target Start/End: Complemental strand, 10372046 - 10371893
Alignment:
| Q |
46 |
ggtgaagaagtgaatagtgagagttttgaaattggtgttgcggttctggaagggtgtctttgtatgactgtgaattatcaaactgttaacattgatgttt |
145 |
Q |
| |
|
||||||||||| |||||| | |||||||||||| ||||||| ||| | | |||||||||||||||||||||| ||||| ||||| |||| ||||| ||| |
|
|
| T |
10372046 |
ggtgaagaagttaatagtaatagttttgaaattcgtgttgctgttttaggagggtgtctttgtatgactgtggattataaaactactaacgttgatattt |
10371947 |
T |
|
| Q |
146 |
ggatgatgaaagaatatggatgtagagatagctggtgtaaactttttactttgg |
199 |
Q |
| |
|
|| |||||||||||||||| | ||||||||| |||||||||||||||||||||| |
|
|
| T |
10371946 |
gggtgatgaaagaatatggttctagagatagttggtgtaaactttttactttgg |
10371893 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 63 - 276
Target Start/End: Original strand, 9065564 - 9065777
Alignment:
| Q |
63 |
tgagagttttgaaattggtgttgcggttctggaagggtgtctttgtatgactgtgaattatcaaactgttaacattgatgtttggatgatgaaagaatat |
162 |
Q |
| |
|
|||||||||| |||| |||||| ||| ||| ||||||||||||||||| | |||||||| ||||| ||| ||||||| |||| |||||||||||||| |
|
|
| T |
9065564 |
tgagagttttcaaatgactgttgctgttttgggagggtgtctttgtatgattttgaattatgaaactactaatattgatggttgggtgatgaaagaatat |
9065663 |
T |
|
| Q |
163 |
ggatgtagagatagctggtgtaaactttttactttggcagaatcgtgtttcaccttacctttgaaagctttgaggcttttagcttattcgagcgatggaa |
262 |
Q |
| |
|
|||| ||||||||| |||||||||||||||||||||| |||| |||||| | || ||||| ||||| ||||| | ||| |||||| | ||||||| |
|
|
| T |
9065664 |
ggatctagagatagttggtgtaaactttttactttggtcaaatcttgtttccattcacatttgacagcttcgaggcctctaggttattccggtgatggaa |
9065763 |
T |
|
| Q |
263 |
gtatggttctgttg |
276 |
Q |
| |
|
||| |||||||||| |
|
|
| T |
9065764 |
gtaaggttctgttg |
9065777 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 83 - 353
Target Start/End: Original strand, 7115633 - 7115906
Alignment:
| Q |
83 |
ttgcggttctggaagggtgtctttgtatgactgtgaattatcaaactgttaacattgatgtttggatgatgaaagaatatggatgtagagatagctggtg |
182 |
Q |
| |
|
|||| ||| ||| ||||||||||||||||| |||||||||| |||| ||| | ||||||||| |||||||| ||||||||| |||||| |||||||| |
|
|
| T |
7115633 |
ttgctgttttgggagggtgtctttgtatgattgtgaattatagaactactaaaacagatgtttgggtgatgaaacaatatggatctagagacagctggtg |
7115732 |
T |
|
| Q |
183 |
taaactttttactttggcagaatcgtgtttcaccttacctttg---aaagctttgaggcttttagcttattcgagcgatggaagtatggttctgttgcaa |
279 |
Q |
| |
|
|||||||||||| |||| | ||||||||| ||| ||||| | | || |||| ||||| |||||| || |||||||| | |||||| ||| || |
|
|
| T |
7115733 |
taaactttttacattggttaattcgtgtttcgatttatctttgattacatggttcaggcctttaggttattctagtgatggaagcaaggttctattggaa |
7115832 |
T |
|
| Q |
280 |
gtagatcctgagaagctgttttggtatgatctcaagagtgaacaagttagttgtgttcaaggaattcctaattt |
353 |
Q |
| |
|
||||| | ||||||| ||||||||||| | ||||| |||||||||||||||||| |||||||||||||||| |
|
|
| T |
7115833 |
atagattgtaggaagctggtttggtatgatttgaagagcgaacaagttagttgtgttgaaggaattcctaattt |
7115906 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #17
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 97 - 276
Target Start/End: Original strand, 8573510 - 8573689
Alignment:
| Q |
97 |
gggtgtctttgtatgactgtgaattatcaaactgttaacattgatgtttggatgatgaaagaatatggatgtagagatagctggtgtaaactttttactt |
196 |
Q |
| |
|
||||||||||||||| ||||||||||| |||| | | |||||||||||| |||||||||||||||| | ||||||||| ||||||||||||||||||| |
|
|
| T |
8573510 |
gggtgtctttgtatgtctgtgaattatgaaaccactgaaattgatgtttgggtgatgaaagaatatggttctagagatagttggtgtaaactttttactt |
8573609 |
T |
|
| Q |
197 |
tggcagaatcgtgtttcaccttacctttgaaagctttgaggcttttagcttattcgagcgatggaagtatggttctgttg |
276 |
Q |
| |
|
| | ||||||||||||| || ||| ||| ||| ||||| ||||| |||||| || |||||||||| |||||||||| |
|
|
| T |
8573610 |
tcgttaaatcgtgtttcactccacattttaaatcttcgaggcctttaggttattctagtgatggaagtaaggttctgttg |
8573689 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #18
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 48 - 198
Target Start/End: Complemental strand, 9274707 - 9274557
Alignment:
| Q |
48 |
tgaagaagtgaatagtgagagttttgaaattggtgttgcggttctggaagggtgtctttgtatgactgtgaattatcaaactgttaacattgatgtttgg |
147 |
Q |
| |
|
||||||||| ||||||||||||||||||||| ||||| ||| ||||||||||||||||||||||| ||||||||| || | | | |||| |||||| |
|
|
| T |
9274707 |
tgaagaagtcaatagtgagagttttgaaattaatgttgttgttttggaagggtgtctttgtatgactttgaattatcgaaatactgaatttgaagtttgg |
9274608 |
T |
|
| Q |
148 |
atgatgaaagaatatggatgtagagatagctggtgtaaactttttactttg |
198 |
Q |
| |
|
|||||||||||||||| | || |||||| ||||||||||||||||||||| |
|
|
| T |
9274607 |
gtgatgaaagaatatggttctacagatagttggtgtaaactttttactttg |
9274557 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #19
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 99 - 276
Target Start/End: Complemental strand, 9292072 - 9291901
Alignment:
| Q |
99 |
gtgtctttgtatgactgtgaattatcaaactgttaacattgatgtttggatgatgaaagaatatggatgtagagatagctggtgtaaactttttactttg |
198 |
Q |
| |
|
||||||||||||||||||||||||| ||||| ||| |||||||||||| |||||||| ||||||| | ||||||||| ||||||||||||||||||||| |
|
|
| T |
9292072 |
gtgtctttgtatgactgtgaattatgaaactactaaaattgatgtttgggtgatgaaacaatatggttctagagatagttggtgtaaactttttactttg |
9291973 |
T |
|
| Q |
199 |
gcagaatcgtgtttcaccttacctttgaaagctttgaggcttttagcttattcgagcgatggaagtatggttctgttg |
276 |
Q |
| |
|
| ||||| | |||| |||||||| ||||||||| |||| |||||| || |||||||||| |||||||||| |
|
|
| T |
9291972 |
gttaaatcgcggttca------ctttgaaatctttgaggcctttatgttattctagggatggaagtaaggttctgttg |
9291901 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #20
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 447 - 561
Target Start/End: Original strand, 12012939 - 12013054
Alignment:
| Q |
447 |
tatcaattcaatggaccgatcatatgatatatctatttaaactc--tgttaaaaggtcaaattgaattcttattatacgacaatgattctctaattattt |
544 |
Q |
| |
|
||||||||||||||||| |||||||||||||| || ||| |||| ||||||| ||||||||||||||||||||||| ||||| ||||||||||||| || |
|
|
| T |
12012939 |
tatcaattcaatggacccatcatatgatatatgtagttagactccatgttaaa-ggtcaaattgaattcttattataggacaaggattctctaattactt |
12013037 |
T |
|
| Q |
545 |
tgaagtctctacctttg |
561 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
12013038 |
tgaagtctctacctttg |
12013054 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #21
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 291 - 399
Target Start/End: Complemental strand, 9291865 - 9291757
Alignment:
| Q |
291 |
gaagctgttttggtatgatctcaagagtgaacaagttagttgtgttcaaggaattcctaatttcgatcaagccatgatttgtgttggaagtcttgtatca |
390 |
Q |
| |
|
||||||||||||||||||| | |||||||||||| |||||| |||| |||||||||||||||| ||| |||| ||||||||||||| ||||||| || || |
|
|
| T |
9291865 |
gaagctgttttggtatgatttgaagagtgaacaaattagttatgttgaaggaattcctaatttggatgaagctatgatttgtgttgaaagtcttctacca |
9291766 |
T |
|
| Q |
391 |
ccttccttc |
399 |
Q |
| |
|
||||||||| |
|
|
| T |
9291765 |
ccttccttc |
9291757 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #22
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 81 - 215
Target Start/End: Complemental strand, 16269242 - 16269108
Alignment:
| Q |
81 |
tgttgcggttctggaagggtgtctttgtatgactgtgaattatcaaactgttaacattgatgtttggatgatgaaagaatatggatgtagagatagctgg |
180 |
Q |
| |
|
|||||| ||| ||| ||| ||||||||||| |||||||||||| ||||| ||| |||||||||||| |||||||||| ||||||| ||||||||| ||| |
|
|
| T |
16269242 |
tgttgctgttttgggaggatgtctttgtataactgtgaattatgaaactactaaaattgatgtttgggtgatgaaagagtatggatatagagatagttgg |
16269143 |
T |
|
| Q |
181 |
tgtaaactttttactttggcagaatcgtgtttcac |
215 |
Q |
| |
|
|| ||||||||||| |||| ||||||||||||| |
|
|
| T |
16269142 |
tgcaaactttttaccttggttaaatcgtgtttcac |
16269108 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #23
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 290 - 398
Target Start/End: Original strand, 8579703 - 8579811
Alignment:
| Q |
290 |
agaagctgttttggtatgatctcaagagtgaacaagttagttgtgttcaaggaattcctaatttcgatcaagccatgatttgtgttggaagtcttgtatc |
389 |
Q |
| |
|
||||||||||||||||||||||||| |||||| |||||| ||||||||||||||||||||||||| || || | ||||||| |||||||| ||| || | |
|
|
| T |
8579703 |
agaagctgttttggtatgatctcaaaagtgaagaagttacttgtgttcaaggaattcctaatttcaatgaaactatgatttatgttggaacccttctacc |
8579802 |
T |
|
| Q |
390 |
accttcctt |
398 |
Q |
| |
|
||||||||| |
|
|
| T |
8579803 |
accttcctt |
8579811 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #24
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 447 - 561
Target Start/End: Original strand, 11987877 - 11987992
Alignment:
| Q |
447 |
tatcaattcaatggaccgatcatatgatatatctatttaaactctgt-taaaaggtcaaattgaattcttattatacgacaatgattctctaattatttt |
545 |
Q |
| |
|
||||||||||||||||| ||||| |||||||| || ||||||| | | | |||||||||||||||||| ||||||| ||||| |||| |||||||| ||| |
|
|
| T |
11987877 |
tatcaattcaatggacccatcatgtgatatatgtagttaaactttatgttaaaggtcaaattgaattcctattataggacaaggattttctaattacttt |
11987976 |
T |
|
| Q |
546 |
gaagtctctacctttg |
561 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
11987977 |
gaagtctctacctttg |
11987992 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #25
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 453 - 561
Target Start/End: Complemental strand, 9364351 - 9364242
Alignment:
| Q |
453 |
ttcaatggaccgatcatatgatatatctatttaaactctgt-taaaaggtcaaattgaattcttattatacgacaatgattctctaattattttgaagtc |
551 |
Q |
| |
|
||||||| ||| |||||||||||||| || ||||||||| | | ||||||||||| |||||||||||||| ||||| || |||||||||| ||||||||| |
|
|
| T |
9364351 |
ttcaatgaacccatcatatgatatatgtacttaaactctatattaaaggtcaaatggaattcttattataggacaaggagtctctaattactttgaagtc |
9364252 |
T |
|
| Q |
552 |
tctacctttg |
561 |
Q |
| |
|
| |||||||| |
|
|
| T |
9364251 |
tatacctttg |
9364242 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #26
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 291 - 399
Target Start/End: Original strand, 8573725 - 8573833
Alignment:
| Q |
291 |
gaagctgttttggtatgatctcaagagtgaacaagttagttgtgttcaaggaattcctaatttcgatcaagccatgatttgtgttggaagtcttgtatca |
390 |
Q |
| |
|
||||||||||||||||||| | |||||||||||||| |||| |||| ||||||||||||||| || ||| ||| |||||||||||||||||||| || |
|
|
| T |
8573725 |
gaagctgttttggtatgatttgaagagtgaacaagtcagttatgttgaaggaattcctaattggaatgcagctatgttttgtgttggaagtcttgtacca |
8573824 |
T |
|
| Q |
391 |
ccttccttc |
399 |
Q |
| |
|
|||| |||| |
|
|
| T |
8573825 |
cctttcttc |
8573833 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 496 - 561
Target Start/End: Complemental strand, 9291628 - 9291563
Alignment:
| Q |
496 |
aaaggtcaaattgaattcttattatacgacaatgattctctaattattttgaagtctctacctttg |
561 |
Q |
| |
|
|||||| ||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||| |
|
|
| T |
9291628 |
aaaggttaaattgaattcttattataggacaaggattctctaattactttgaagtctctacctttg |
9291563 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 453 - 561
Target Start/End: Complemental strand, 9315753 - 9315644
Alignment:
| Q |
453 |
ttcaatggaccgatcatatgatatatctatttaaactctgtta-aaaggtcaaattgaattcttattatacgacaatgattctctaattattttgaagtc |
551 |
Q |
| |
|
||||||||||| ||||||||||||| || ||||||||| | |||||||||||||||||||||||||| ||||| ||||| ||||||| ||| || || |
|
|
| T |
9315753 |
ttcaatggacccatcatatgatataagtagttaaactctatgctaaaggtcaaattgaattcttattataggacaaggattccctaattactttaaattc |
9315654 |
T |
|
| Q |
552 |
tctacctttg |
561 |
Q |
| |
|
|||||||||| |
|
|
| T |
9315653 |
tctacctttg |
9315644 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 449 - 561
Target Start/End: Complemental strand, 9320709 - 9320596
Alignment:
| Q |
449 |
tcaattcaatggaccgatcatatgatatatctatttaaactctgttaaa-aggtcaaattgaattcttattatacgacaatgattctctaattattttga |
547 |
Q |
| |
|
||||||||||||||| |||||||||||||| | ||||||||| | | ||||||||||||||| ||||||| ||||| ||| ||||||||| ||||| |
|
|
| T |
9320709 |
tcaattcaatggacccatcatatgatatattaagttaaactctatgctataggtcaaattgaatttttattatcggacaaggatactctaattactttga |
9320610 |
T |
|
| Q |
548 |
agtctctacctttg |
561 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
9320609 |
agtctctacctttg |
9320596 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 291 - 392
Target Start/End: Complemental strand, 10371780 - 10371679
Alignment:
| Q |
291 |
gaagctgttttggtatgatctcaagagtgaacaagttagttgtgttcaaggaattcctaatttcgatcaagccatgatttgtgttggaagtcttgtatca |
390 |
Q |
| |
|
||||||||||||||||||| | ||||||||||||||||||| |||| |||||| | ||||||| ||| | || ||| |||||||||| ||||||||| || |
|
|
| T |
10371780 |
gaagctgttttggtatgatttgaagagtgaacaagttagttatgttgaaggaaattctaatttggatgatgctatggtttgtgttggtagtcttgtacca |
10371681 |
T |
|
| Q |
391 |
cc |
392 |
Q |
| |
|
|| |
|
|
| T |
10371680 |
cc |
10371679 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #31
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 450 - 561
Target Start/End: Original strand, 12019282 - 12019391
Alignment:
| Q |
450 |
caattcaatggaccgatcatatgatatatctatttaaactctgttaaaaggtcaaattgaattcttattatacgacaatgattctctaattattttgaag |
549 |
Q |
| |
|
|||||||||||||| |||||||||||||| || ||||||||| | || || | | |||||||||||||| ||||| ||||||||||||| ||||||| |
|
|
| T |
12019282 |
caattcaatggacccatcatatgatatatgtagttaaactctatgttaatgt--attggaattcttattataggacaaggattctctaattactttgaag |
12019379 |
T |
|
| Q |
550 |
tctctacctttg |
561 |
Q |
| |
|
|||||||||||| |
|
|
| T |
12019380 |
tctctacctttg |
12019391 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 291 - 399
Target Start/End: Complemental strand, 10347707 - 10347596
Alignment:
| Q |
291 |
gaagctgttttggtatgatctcaagagtgaacaagttagttgtgttcaaggaat---tcctaatttcgatcaagccatgatttgtgttggaagtcttgta |
387 |
Q |
| |
|
||||||||||||||||||| | |||||||||||| |||||| |||| ||||||| ||||||| | || || | ||| ||||||||||||||||||| |
|
|
| T |
10347707 |
gaagctgttttggtatgatttgaagagtgaacaaattagttatgttgaaggaattcctcctaatatgaatgaaactatgttttgtgttggaagtcttgtc |
10347608 |
T |
|
| Q |
388 |
tcaccttccttc |
399 |
Q |
| |
|
||||||||||| |
|
|
| T |
10347607 |
ccaccttccttc |
10347596 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 299 - 399
Target Start/End: Complemental strand, 9274435 - 9274335
Alignment:
| Q |
299 |
tttggtatgatctcaagagtgaacaagttagttgtgttcaaggaattcctaatttcgatcaagccatgatttgtgttggaagtcttgtatcaccttcctt |
398 |
Q |
| |
|
||||||||||| | ||||||||||||||||||| |||| ||||||||||||| ||| || | | || ||||| ||||||||| ||||| |||| ||||| |
|
|
| T |
9274435 |
tttggtatgatttgaagagtgaacaagttagttttgttaaaggaattcctaacttcaatggaactattatttgggttggaagttttgtaccaccctcctt |
9274336 |
T |
|
| Q |
399 |
c |
399 |
Q |
| |
|
| |
|
|
| T |
9274335 |
c |
9274335 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 116 - 199
Target Start/End: Complemental strand, 7612057 - 7611974
Alignment:
| Q |
116 |
tgaattatcaaactgttaacattgatgtttggatgatgaaagaatatggatgtagagatagctggtgtaaactttttactttgg |
199 |
Q |
| |
|
|||||||| ||||| |||| ||||||||||| |||||||||||||||||| | |||||| ||||||||| | |||||||||| |
|
|
| T |
7612057 |
tgaattatgaaactattaagtttgatgtttgggtgatgaaagaatatggattaaaagatagttggtgtaaattgtttactttgg |
7611974 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 280 - 399
Target Start/End: Original strand, 9065802 - 9065921
Alignment:
| Q |
280 |
gtagatcctgagaagctgttttggtatgatctcaagagtgaacaagttagttgtgttcaaggaattcctaatttcgatcaagccatgatttgtgttggaa |
379 |
Q |
| |
|
||||||| | ||||||| |||||||||||| | |||||||||||||||| || |||| ||||| ||||||||| || | | |||||||||||| || |
|
|
| T |
9065802 |
gtagatcatcagaagctcttttggtatgatttgaagagtgaacaagttatttatgttgaaggagttcctaattggaatgacactgtgatttgtgttgaaa |
9065901 |
T |
|
| Q |
380 |
gtcttgtatcaccttccttc |
399 |
Q |
| |
|
|||||||| || |||||||| |
|
|
| T |
9065902 |
gtcttgtaccaacttccttc |
9065921 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 506 - 561
Target Start/End: Original strand, 12006543 - 12006598
Alignment:
| Q |
506 |
ttgaattcttattatacgacaatgattctctaattattttgaagtctctacctttg |
561 |
Q |
| |
|
||||||||||||| || ||||| ||||||||||||| ||||||||||||||||||| |
|
|
| T |
12006543 |
ttgaattcttattttaggacaaggattctctaattactttgaagtctctacctttg |
12006598 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 460 - 561
Target Start/End: Original strand, 9066038 - 9066138
Alignment:
| Q |
460 |
gaccgatcatatgatatatctatttaaactctgttaaaaggtcaaattgaattcttattatacgacaatgattctctaattattttgaagtctctacctt |
559 |
Q |
| |
|
|||| |||||||||||||| || |||||| || | || |||||||||||| |||||| ||| || || ||||||||||||| |||||||| |||||||| |
|
|
| T |
9066038 |
gacccatcatatgatatatgtagctaaactttgctcaa-ggtcaaattgaagtcttatcataggataaagattctctaattactttgaagtttctacctt |
9066136 |
T |
|
| Q |
560 |
tg |
561 |
Q |
| |
|
|| |
|
|
| T |
9066137 |
tg |
9066138 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 290 - 350
Target Start/End: Complemental strand, 16269012 - 16268952
Alignment:
| Q |
290 |
agaagctgttttggtatgatctcaagagtgaacaagttagttgtgttcaaggaattcctaa |
350 |
Q |
| |
|
||||| |||||||||||||| | |||||||||| |||||||| |||| ||||||||||||| |
|
|
| T |
16269012 |
agaagttgttttggtatgatttgaagagtgaacgagttagttatgttgaaggaattcctaa |
16268952 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 293 - 399
Target Start/End: Complemental strand, 10341293 - 10341184
Alignment:
| Q |
293 |
agctgttttggtatgatctcaagagtgaacaagttag---ttgtgttcaaggaattcctaatttcgatcaagccatgatttgtgttggaagtcttgtatc |
389 |
Q |
| |
|
||||||||||||||||| | |||||||||||||||| || |||| ||||||||||| |||| ||| | || ||||| |||||||||||| | ||| | |
|
|
| T |
10341293 |
agctgttttggtatgatttggagagtgaacaagttagttattatgttgaaggaattcctgatttggatgatgctatgatgtgtgttggaagtatagtacc |
10341194 |
T |
|
| Q |
390 |
accttccttc |
399 |
Q |
| |
|
||||| |||| |
|
|
| T |
10341193 |
acctttcttc |
10341184 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 498 - 561
Target Start/End: Complemental strand, 10352798 - 10352735
Alignment:
| Q |
498 |
aggtcaaattgaattcttattatacgacaatgattctctaattattttgaagtctctacctttg |
561 |
Q |
| |
|
|||||||||||||||||||| ||| || || ||||||||||||| ||||| |||| |||||||| |
|
|
| T |
10352798 |
aggtcaaattgaattcttatcataggataaggattctctaattactttgacgtctttacctttg |
10352735 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 116 - 199
Target Start/End: Original strand, 17566107 - 17566190
Alignment:
| Q |
116 |
tgaattatcaaactgttaacattgatgtttggatgatgaaagaatatggatgtagagatagctggtgtaaactttttactttgg |
199 |
Q |
| |
|
|||||||||||||| ||| ||||||||||| |||| ||||||||||||| |||||||| ||||||||| | ||||| |||| |
|
|
| T |
17566107 |
tgaattatcaaactactaatgttgatgtttgggtgattaaagaatatggatttagagataattggtgtaaattgtttaccttgg |
17566190 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 447 - 517
Target Start/End: Complemental strand, 10371579 - 10371508
Alignment:
| Q |
447 |
tatcaattcaatggaccgatcatatgatatatctatttaaactctgt-taaaaggtcaaattgaattcttat |
517 |
Q |
| |
|
||||| ||||||||| | ||||||| |||||| | ||||||||||| | |||||||||||||||||||||| |
|
|
| T |
10371579 |
tatcagttcaatggatccatcatattatatatgcagttaaactctgtgttaaaggtcaaattgaattcttat |
10371508 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 460 - 561
Target Start/End: Original strand, 8573931 - 8574035
Alignment:
| Q |
460 |
gaccgatcatatgatatatctatttaaactctgtta-aaaggtcaaattgaattcttatta--tacgacaatgattctctaattattttgaagtctctac |
556 |
Q |
| |
|
|||| |||||||||||||| | ||||||||| | |||||||||||| ||||||||| | || ||||| ||||||||||||| |||||||| | ||| |
|
|
| T |
8573931 |
gacccatcatatgatatatgtggttaaactctatgctaaaggtcaaattaaattcttatcacataggacaaggattctctaattactttgaagtttatac |
8574030 |
T |
|
| Q |
557 |
ctttg |
561 |
Q |
| |
|
||||| |
|
|
| T |
8574031 |
ctttg |
8574035 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 456 - 552
Target Start/End: Original strand, 9284606 - 9284703
Alignment:
| Q |
456 |
aatggaccgatcatatgatatatctatttaaactctgt-taaaaggtcaaattgaattcttattatacgacaatgattctctaattattttgaagtct |
552 |
Q |
| |
|
|||||||| ||||||| || ||| || ||||||| | | | ||||||||||||||||||||||||| ||||| || |||| ||||| ||||| |||| |
|
|
| T |
9284606 |
aatggacccatcatataatttatgtagttaaactttatattaaaggtcaaattgaattcttattatcggacaaggagtctccaattactttgatgtct |
9284703 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 496 - 541
Target Start/End: Original strand, 9295097 - 9295142
Alignment:
| Q |
496 |
aaaggtcaaattgaattcttattatacgacaatgattctctaatta |
541 |
Q |
| |
|
|||||||||||||||||||||||||| |||| | ||||||||||| |
|
|
| T |
9295097 |
aaaggtcaaattgaattcttattataggacaggggttctctaatta |
9295142 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 496 - 548
Target Start/End: Complemental strand, 9274252 - 9274200
Alignment:
| Q |
496 |
aaaggtcaaattgaattcttattatacgacaatgattctctaattattttgaa |
548 |
Q |
| |
|
|||||||| |||||||||||||||| ||||| ||||| ||||||| |||||| |
|
|
| T |
9274252 |
aaaggtcatgttgaattcttattataggacaaggattcactaattactttgaa |
9274200 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 449 - 516
Target Start/End: Complemental strand, 9328328 - 9328260
Alignment:
| Q |
449 |
tcaattcaatggaccgatcatatgatatatctatttaaactctgt-taaaaggtcaaattgaattctta |
516 |
Q |
| |
|
||||||||||||||| ||||||||||||| | ||||||||| | ||||||||||||||||||||| |
|
|
| T |
9328328 |
tcaattcaatggacccgtcatatgatatatgaagttaaactctatgctaaaggtcaaattgaattctta |
9328260 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 85; Significance: 3e-40; HSPs: 4)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 53 - 392
Target Start/End: Complemental strand, 26575042 - 26574700
Alignment:
| Q |
53 |
aagtgaatagtgagagttttgaaattggtgttgcggttctggaagggtgtctttgtatgactgtgaattatcaaactgttaacattgatgtttggatgat |
152 |
Q |
| |
|
|||| |||||| |||||||| ||||| ||||||| | | | | |||||||||||||||||||||| ||||| || | ||| |||||||||||| |||| |
|
|
| T |
26575042 |
aagttaatagtaagagttttaaaattcgtgttgctgatttaggagggtgtctttgtatgactgtggattataaagatactaaaattgatgtttgggtgat |
26574943 |
T |
|
| Q |
153 |
gaaagaatatggatgtagagatagctggtgtaaactttttactttggcagaatcgtgtttc---accttacctttgaaagctttgaggcttttagcttat |
249 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||| ||| ||||||||||| |||||| || || ||||||||||||||| |||| |
|
|
| T |
26574942 |
gaaagaatatggatgtagagatagttggtgtaaactttttactgtggttaaatcgtgtttcgatgatttacctgtggaatctttgaggcttttaggttat |
26574843 |
T |
|
| Q |
250 |
tcgagcgatggaagtatggttctgttgcaagtagatcctgagaagctgttttggtatgatctcaagagtgaacaagttagttgtgttcaaggaattccta |
349 |
Q |
| |
|
|| | ||||||| | |||| ||||| |||||| || ||| ||||||||||||||| | ||||| | ||||||||| | |||||| | || | |
|
|
| T |
26574842 |
tccattgatggaaaaaaggttttgttgagggtagatgttgtgaatctgttttggtatgatttggagagtaatcaagttagtcattttcaagaagatcttg |
26574743 |
T |
|
| Q |
350 |
atttcgatcaagccatgatttgtgttggaagtcttgtatcacc |
392 |
Q |
| |
|
|||| ||| | || |||||||||||||||||||||||| |||| |
|
|
| T |
26574742 |
atttggatgacgctatgatttgtgttggaagtcttgtaccacc |
26574700 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 296 - 398
Target Start/End: Complemental strand, 561121 - 561019
Alignment:
| Q |
296 |
tgttttggtatgatctcaagagtgaacaagttagttgtgttcaaggaattcctaatttcgatcaagccatgatttgtgttggaagtcttgtatcaccttc |
395 |
Q |
| |
|
||||||||||||||||||| ||| || || || ||||||| ||||||||||||| || || ||| ||||||| ||||||||| ||| || ||||||| |
|
|
| T |
561121 |
tgttttggtatgatctcaaaagtaaaagagctacctgtgttccaggaattcctaatatcaataaagttatgatttatgttggaagccttctaccaccttc |
561022 |
T |
|
| Q |
396 |
ctt |
398 |
Q |
| |
|
||| |
|
|
| T |
561021 |
ctt |
561019 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 498 - 557
Target Start/End: Complemental strand, 26574584 - 26574525
Alignment:
| Q |
498 |
aggtcaaattgaattcttattatacgacaatgattctctaattattttgaagtctctacc |
557 |
Q |
| |
|
|||||||||||||||||||| ||| || || ||||||||||||| ||||| |||| |||| |
|
|
| T |
26574584 |
aggtcaaattgaattcttatcataggataaggattctctaattactttgacgtctttacc |
26574525 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 137 - 183
Target Start/End: Complemental strand, 561319 - 561273
Alignment:
| Q |
137 |
ttgatgtttggatgatgaaagaatatggatgtagagatagctggtgt |
183 |
Q |
| |
|
||||||||||| | |||||||||||||||| ||||||||| |||||| |
|
|
| T |
561319 |
ttgatgtttgggtaatgaaagaatatggatttagagatagttggtgt |
561273 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 81; Significance: 7e-38; HSPs: 4)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 65 - 276
Target Start/End: Complemental strand, 37462661 - 37462447
Alignment:
| Q |
65 |
agagttttgaaattggtgttgcggttctggaagggtgtctttgtatgactgtgaattatcaaa---ctgttaacattgatgtttggatgatgaaagaata |
161 |
Q |
| |
|
||||||||| | ||| |||||| ||| ||| ||| |||||||||||||||||||||||| ||| || ||| ||||||||||| ||||||||||||| |
|
|
| T |
37462661 |
agagttttggacttgatgttgctgttttgggaggctgtctttgtatgactgtgaattataaaaaaactactaaatttgatgtttgggtgatgaaagaata |
37462562 |
T |
|
| Q |
162 |
tggatgtagagatagctggtgtaaactttttactttggcagaatcgtgtttcaccttacctttgaaagctttgaggcttttagcttattcgagcgatgga |
261 |
Q |
| |
|
||||| ||||||||| ||||||||||||| |||| ||| ||||||||||||| | |||||||||| ||||||||| |||| |||||| || |||||| |
|
|
| T |
37462561 |
tggatctagagatagttggtgtaaactttgtactgtggataaatcgtgtttcacttcacctttgaaatctttgaggcctttatgttattctagtgatgga |
37462462 |
T |
|
| Q |
262 |
agtatggttctgttg |
276 |
Q |
| |
|
|||| |||| ||||| |
|
|
| T |
37462461 |
agtaaggttttgttg |
37462447 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 453 - 561
Target Start/End: Complemental strand, 37462205 - 37462095
Alignment:
| Q |
453 |
ttcaatggaccgatcatatgatatatctatttaaactctgt--taaaaggtcaaattgaattcttattatacgacaatgattctctaattattttgaagt |
550 |
Q |
| |
|
|||| |||||| |||||||||||||| || |||| ||| | |||||||||||||||||||||| ||||| ||||| ||||||||||||| |||||||| |
|
|
| T |
37462205 |
ttcattggacccatcatatgatatatgtagttaagttctatgctaaaaggtcaaattgaattcttgttataggacaaggattctctaattactttgaagt |
37462106 |
T |
|
| Q |
551 |
ctctacctttg |
561 |
Q |
| |
|
||||||||||| |
|
|
| T |
37462105 |
ctctacctttg |
37462095 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 292 - 393
Target Start/End: Complemental strand, 37462410 - 37462306
Alignment:
| Q |
292 |
aagctgttttggtatgatctcaagagtgaacaagttagttgtgttcaaggaattcctaatttcgatcaa---gccatgatttgtgttggaagtcttgtat |
388 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||| | || ||||| |||||||||| || | || ||||||||||||| ||||||||||| |
|
|
| T |
37462410 |
aagctgttttggtatgattggaagagtgaacaagttagttatattgaaggagttcctaatttgaatggagctgctatgatttgtgttgaaagtcttgtat |
37462311 |
T |
|
| Q |
389 |
cacct |
393 |
Q |
| |
|
||||| |
|
|
| T |
37462310 |
cacct |
37462306 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 137 - 197
Target Start/End: Complemental strand, 39427740 - 39427680
Alignment:
| Q |
137 |
ttgatgtttggatgatgaaagaatatggatgtagagatagctggtgtaaactttttacttt |
197 |
Q |
| |
|
||||||||||| |||||||||||||||||| |||| |||| ||||||||| | |||||||| |
|
|
| T |
39427740 |
ttgatgtttgggtgatgaaagaatatggatatagatatagttggtgtaaattgtttacttt |
39427680 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 77; Significance: 2e-35; HSPs: 6)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 84 - 276
Target Start/End: Complemental strand, 45243849 - 45243657
Alignment:
| Q |
84 |
tgcggttctggaagggtgtctttgtatgactgtgaattatcaaactgttaacattgatgtttggatgatgaaagaatatggatgtagagatagctggtgt |
183 |
Q |
| |
|
||||||| ||| || |||||||||||||| |||||||||||||||| | | |||||||||||| |||||||||||||||| | |||||||| |||||| |
|
|
| T |
45243849 |
tgcggttttgggagagtgtctttgtatgattgtgaattatcaaactaatgaaattgatgtttgggtgatgaaagaatatggttctagagatatttggtgt |
45243750 |
T |
|
| Q |
184 |
aaactttttactttggcagaatcgtgtttcaccttacctttgaaagctttgaggcttttagcttattcgagcgatggaagtatggttctgttg |
276 |
Q |
| |
|
|||||||||||||||| |||||||||||| || | |||| || ||||||||| |||| ||||||||| ||| |||||| ||||||||| |
|
|
| T |
45243749 |
aaactttttactttggttaaatcgtgtttcaattttcatttggaatctttgaggcctttatgttattcgagtgatcgaagtaaagttctgttg |
45243657 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 93 - 199
Target Start/End: Complemental strand, 45230576 - 45230467
Alignment:
| Q |
93 |
ggaagggtgtctttgtatgactgtgaattatcaaactgttaacattgatg---tttggatgatgaaagaatatggatgtagagatagctggtgtaaactt |
189 |
Q |
| |
|
||||| |||||||||||||| |||||||||||||||| ||| ||||||| ||||| |||||||||||||||| | ||||||||| |||||||||||| |
|
|
| T |
45230576 |
ggaagagtgtctttgtatgattgtgaattatcaaactaataaaattgatgatgtttgggtgatgaaagaatatggttctagagatagttggtgtaaactt |
45230477 |
T |
|
| Q |
190 |
tttactttgg |
199 |
Q |
| |
|
|||||||||| |
|
|
| T |
45230476 |
tttactttgg |
45230467 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 136 - 276
Target Start/End: Complemental strand, 45238048 - 45237908
Alignment:
| Q |
136 |
attgatgtttggatgatgaaagaatatggatgtagagatagctggtgtaaactttttactttggcagaatcgtgtttcaccttacctttgaaagctttga |
235 |
Q |
| |
|
|||||||||||| |||||||||||||||||| ||||||||| |||||||||||||||||||| | ||||||||||||| || | | ||||| |||| |
|
|
| T |
45238048 |
attgatgtttgggtgatgaaagaatatggatctagagatagttggtgtaaactttttactttagttgaatcgtgtttcaattttcatctgaaattgttga |
45237949 |
T |
|
| Q |
236 |
ggcttttagcttattcgagcgatggaagtatggttctgttg |
276 |
Q |
| |
|
||| |||| |||||| |||||| |||||| ||||||||| |
|
|
| T |
45237948 |
ggcctttatgttattcaagcgatcgaagtaaagttctgttg |
45237908 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 291 - 398
Target Start/End: Complemental strand, 45230351 - 45230244
Alignment:
| Q |
291 |
gaagctgttttggtatgatctcaagagtgaacaagttagttgtgttcaaggaattcctaatttcgatcaagccatgatttgtgttggaagtcttgtatca |
390 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||| | ||||||||||||||||| |||| || ||| |||||||||| || ||| ||||||||| |
|
|
| T |
45230351 |
gaagctgttttggtatgatttcaagagtgaacaagttactcatgttcaaggaattcctactttcaatgaagtaatgatttgtgctgaaagccttgtatca |
45230252 |
T |
|
| Q |
391 |
ccttcctt |
398 |
Q |
| |
|
|| ||||| |
|
|
| T |
45230251 |
ccatcctt |
45230244 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 291 - 398
Target Start/End: Complemental strand, 45243613 - 45243505
Alignment:
| Q |
291 |
gaagctgttttggtatgatctcaagagtgaacaagttagttgtgttcaaggaattcctaatttcgatcaagccatgatttgtgttggaagtctt-gtatc |
389 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| ||| || ||||||||||||||||| |||| || ||| |||||||||| || ||| ||| ||||| |
|
|
| T |
45243613 |
gaagctgttttggtatgatctcaacagtgaacaacttacttatgttcaaggaattcctactttcaatgaagtaatgatttgtgctgaaagccttggtatc |
45243514 |
T |
|
| Q |
390 |
accttcctt |
398 |
Q |
| |
|
||||||||| |
|
|
| T |
45243513 |
accttcctt |
45243505 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 291 - 399
Target Start/End: Complemental strand, 45237869 - 45237761
Alignment:
| Q |
291 |
gaagctgttttggtatgatctcaagagtgaacaagttagttgtgttcaaggaattcctaatttcgatcaagccatgatttgtgttggaagtcttgtatca |
390 |
Q |
| |
|
|||| ||||||||||||| ||||||| ||||||||||| || ||||| ||||||||||| ||| || ||| |||||||||| || ||| |||||| || |
|
|
| T |
45237869 |
gaagttgttttggtatgacctcaagaatgaacaagttatttatgttcgaggaattcctactttgaatgaagtaatgatttgtgctgaaagccttgtacca |
45237770 |
T |
|
| Q |
391 |
ccttccttc |
399 |
Q |
| |
|
||||||||| |
|
|
| T |
45237769 |
ccttccttc |
45237761 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0667 (Bit Score: 67; Significance: 2e-29; HSPs: 3)
Name: scaffold0667
Description:
Target: scaffold0667; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 71 - 273
Target Start/End: Complemental strand, 4634 - 4432
Alignment:
| Q |
71 |
ttgaaattggtgttgcggttctggaagggtgtctttgtatgactgtgaattatcaaactgttaacattgatgtttggatgatgaaagaatatggatgtag |
170 |
Q |
| |
|
||||||||| |||||| | | ||| ||| |||||||||||||||||||||||| ||||| ||| |||||||||||| |||||||| ||||||||| | |
|
|
| T |
4634 |
ttgaaattgatgttgctgctttgggaggatgtctttgtatgactgtgaattatgaaactactaaaattgatgtttgggtgatgaaacaatatggattaaa |
4535 |
T |
|
| Q |
171 |
agatagctggtgtaaactttttactttggcagaatcgtgtttcaccttacctttgaaagctttgaggcttttagcttattcgagcgatggaagtatggtt |
270 |
Q |
| |
|
|||||| |||||||||||||||||| || |||||||| |||| | || ||||||| ||| ||| | |||| |||||| || |||||||||| |||| |
|
|
| T |
4534 |
agatagttggtgtaaactttttactatgatgaaatcgtgtgtcacttcacatttgaaatcttcgagtcctttatgttattctagtgatggaagtaaggtt |
4435 |
T |
|
| Q |
271 |
ctg |
273 |
Q |
| |
|
||| |
|
|
| T |
4434 |
ctg |
4432 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0667; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 453 - 561
Target Start/End: Complemental strand, 4179 - 4070
Alignment:
| Q |
453 |
ttcaatggaccgatcatatgatatatctatttaaactctgt--taaaaggtcaaattgaattcttattatacgacaatgattctctaattattttgaagt |
550 |
Q |
| |
|
||||||||||| |||||||||| ||| || ||||||||||| ||||| ||||||||||||||||||||| || || |||||| |||||| |||||| | |
|
|
| T |
4179 |
ttcaatggacccatcatatgatttatttagttaaactctgtgctaaaac-tcaaattgaattcttattataggaaaaggattctataattactttgaatt |
4081 |
T |
|
| Q |
551 |
ctctacctttg |
561 |
Q |
| |
|
||||||||||| |
|
|
| T |
4080 |
ctctacctttg |
4070 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0667; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 290 - 398
Target Start/End: Complemental strand, 4394 - 4289
Alignment:
| Q |
290 |
agaagctgttttggtatgatctcaagagtgaacaagttagttgtgttcaaggaattcctaatttcgatcaagccatgatttgtgttggaagtcttgtatc |
389 |
Q |
| |
|
|||||||||||||||||||| | |||| |||||||||||||| || ||| ||||||| ||||| || ||| | |||||||||||||||||||||| | |
|
|
| T |
4394 |
agaagctgttttggtatgatttgaagactgaacaagttagttatg---aagaaattcctgatttcaatggagctaagatttgtgttggaagtcttgtacc |
4298 |
T |
|
| Q |
390 |
accttcctt |
398 |
Q |
| |
|
||||||||| |
|
|
| T |
4297 |
accttcctt |
4289 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 137 - 198
Target Start/End: Complemental strand, 36224515 - 36224454
Alignment:
| Q |
137 |
ttgatgtttggatgatgaaagaatatggatgtagagatagctggtgtaaactttttactttg |
198 |
Q |
| |
|
||||||||||| |||||||||||||||||| ||||||||| ||||||||| | ||||||||| |
|
|
| T |
36224515 |
ttgatgtttgggtgatgaaagaatatggatttagagatagttggtgtaaattgtttactttg |
36224454 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University