View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10075_high_4 (Length: 322)
Name: NF10075_high_4
Description: NF10075
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10075_high_4 |
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Alignment Details
Target: chr2 (Bit Score: 221; Significance: 1e-121; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 17 - 312
Target Start/End: Original strand, 38897927 - 38898225
Alignment:
| Q |
17 |
aacacctattttaatgtttatttcacacaaaaa-gtgaaatctttagagtctttgaaacatagtcaaattgaaagtgcgggttaattcccgaagaagatt |
115 |
Q |
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| T |
38897927 |
aacacctattttaatgtttatttcacacaaaaaagtgaaatcttttgagtctttgaaacatagtcaaattgaaagtgcgggttaattcccgaagaagatt |
38898026 |
T |
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| Q |
116 |
gagaaactgttgtaaaatatttgaattgaatcataatggattnnnnnnnnnnnnnnnnntata--gggaaaattagtttttcatttcattacaataataa |
213 |
Q |
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| T |
38898027 |
gagaaactgttgtaaaatatttgaattgaatcataatggattaaaataaaataaaaaaatatatagggaaaattagtttttcatttcattacaataataa |
38898126 |
T |
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| Q |
214 |
tatgatgatcagtttggtggctcaacaaactggcaagaagggaaatccaaaagagaaagaccaaaaaacatagaaaagggaataattaacatgcctatg |
312 |
Q |
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| T |
38898127 |
tctgatgatcagtttggtggctcaacaaactggcaagaagggaaatccaaaagagaaagaccaaaaaacatagaaaagggaataattaacatgcctatg |
38898225 |
T |
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