View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10075_low_16 (Length: 250)

Name: NF10075_low_16
Description: NF10075
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10075_low_16
NF10075_low_16
[»] chr6 (31 HSPs)
chr6 (2-240)||(31076838-31077082)
chr6 (5-186)||(14521684-14521865)
chr6 (5-208)||(31979501-31979705)
chr6 (5-204)||(1115009-1115208)
chr6 (5-208)||(5572147-5572350)
chr6 (5-209)||(24435876-24436080)
chr6 (51-218)||(10077115-10077284)
chr6 (11-218)||(31086384-31086592)
chr6 (51-155)||(21801294-21801399)
chr6 (50-218)||(22963678-22963846)
chr6 (50-218)||(23824547-23824715)
chr6 (113-208)||(31936575-31936671)
chr6 (51-153)||(4629998-4630101)
chr6 (5-137)||(33721463-33721596)
chr6 (52-196)||(5757430-5757575)
chr6 (51-155)||(18232887-18232992)
chr6 (5-137)||(30518033-30518165)
chr6 (13-108)||(99245-99339)
chr6 (51-124)||(2973019-2973093)
chr6 (119-210)||(21356020-21356114)
chr6 (113-155)||(22709060-22709102)
chr6 (51-118)||(28137494-28137562)
chr6 (102-155)||(5674773-5674825)
chr6 (51-109)||(16569047-16569107)
chr6 (10-79)||(31936695-31936764)
chr6 (51-124)||(17758037-17758111)
chr6 (51-124)||(21588945-21589019)
chr6 (51-124)||(21593678-21593752)
chr6 (49-114)||(22424917-22424983)
chr6 (84-151)||(27165729-27165797)
chr6 (11-87)||(33690736-33690812)
[»] chr7 (35 HSPs)
chr7 (5-208)||(5817175-5817379)
chr7 (47-235)||(28617172-28617362)
chr7 (5-218)||(20284067-20284281)
chr7 (5-208)||(29159791-29159997)
chr7 (5-209)||(3047242-3047446)
chr7 (51-208)||(55936-56094)
chr7 (5-208)||(2580378-2580582)
chr7 (5-235)||(23402918-23403150)
chr7 (51-218)||(46516260-46516429)
chr7 (10-218)||(33332360-33332569)
chr7 (10-208)||(9189917-9190117)
chr7 (10-155)||(2647607-2647751)
chr7 (53-218)||(49091639-49091806)
chr7 (51-208)||(35960804-35960963)
chr7 (10-208)||(4796578-4796776)
chr7 (51-124)||(38671302-38671376)
chr7 (51-195)||(21983285-21983432)
chr7 (43-116)||(761255-761328)
chr7 (5-113)||(9235487-9235596)
chr7 (102-155)||(18413681-18413733)
chr7 (52-155)||(21639850-21639954)
chr7 (54-210)||(2479321-2479479)
chr7 (49-124)||(41649091-41649166)
chr7 (52-155)||(44848636-44848739)
chr7 (72-124)||(3259029-3259083)
chr7 (113-199)||(9185178-9185265)
chr7 (1-87)||(45685646-45685732)
chr7 (49-124)||(2390294-2390370)
chr7 (102-155)||(2058007-2058059)
chr7 (10-79)||(9185084-9185153)
chr7 (102-155)||(18408805-18408857)
chr7 (51-124)||(6431985-6432059)
chr7 (51-124)||(22269987-22270061)
chr7 (51-120)||(25615867-25615937)
chr7 (51-124)||(31733049-31733123)
[»] chr2 (49 HSPs)
chr2 (7-208)||(2869599-2869802)
chr2 (13-197)||(27149207-27149392)
chr2 (2-209)||(15903792-15903998)
chr2 (5-182)||(2837935-2838113)
chr2 (5-208)||(31056031-31056235)
chr2 (5-151)||(28770679-28770825)
chr2 (13-155)||(35397554-35397694)
chr2 (5-218)||(14698914-14699126)
chr2 (51-218)||(21629922-21630090)
chr2 (7-210)||(1345448-1345654)
chr2 (5-191)||(40014930-40015117)
chr2 (51-208)||(34682284-34682443)
chr2 (5-153)||(18674305-18674454)
chr2 (51-218)||(20522198-20522367)
chr2 (51-208)||(10445394-10445553)
chr2 (5-218)||(13569306-13569521)
chr2 (51-208)||(39482919-39483078)
chr2 (10-155)||(8390059-8390205)
chr2 (51-155)||(8040102-8040209)
chr2 (5-155)||(10707157-10707307)
chr2 (5-219)||(34388835-34389043)
chr2 (51-218)||(33528576-33528740)
chr2 (1-155)||(27139844-27139998)
chr2 (52-155)||(3491792-3491896)
chr2 (90-218)||(16940199-16940328)
chr2 (90-218)||(17010864-17010993)
chr2 (51-155)||(17865245-17865350)
chr2 (51-155)||(33118178-33118283)
chr2 (51-124)||(11151671-11151745)
chr2 (51-124)||(11690515-11690589)
chr2 (52-155)||(28259129-28259232)
chr2 (51-124)||(42362366-42362440)
chr2 (2-103)||(41586453-41586552)
chr2 (49-124)||(723824-723900)
chr2 (51-125)||(14633905-14633980)
chr2 (102-155)||(25398537-25398589)
chr2 (102-155)||(25403675-25403727)
chr2 (102-155)||(25407664-25407716)
chr2 (79-155)||(16388449-16388525)
chr2 (51-184)||(42039619-42039754)
chr2 (5-56)||(3278141-3278192)
chr2 (49-124)||(36318089-36318165)
chr2 (102-155)||(9296404-9296456)
chr2 (102-155)||(11098930-11098982)
chr2 (102-155)||(14291530-14291582)
chr2 (51-117)||(24885675-24885742)
chr2 (51-125)||(34139850-34139925)
chr2 (113-174)||(40738865-40738926)
chr2 (72-118)||(42288196-42288244)
[»] chr8 (37 HSPs)
chr8 (1-240)||(5990462-5990702)
chr8 (11-176)||(9054748-9054914)
chr8 (1-235)||(28307522-28307758)
chr8 (5-155)||(3051162-3051312)
chr8 (37-218)||(6813660-6813844)
chr8 (10-208)||(19752303-19752503)
chr8 (51-218)||(23799527-23799696)
chr8 (5-208)||(26403134-26403339)
chr8 (51-153)||(6127265-6127368)
chr8 (5-139)||(7493078-7493212)
chr8 (1-144)||(14601216-14601359)
chr8 (51-208)||(5702433-5702592)
chr8 (39-155)||(33503780-33503897)
chr8 (52-155)||(7412383-7412486)
chr8 (39-155)||(11771983-11772098)
chr8 (51-124)||(30291620-30291695)
chr8 (37-122)||(8863563-8863646)
chr8 (102-196)||(31071232-31071326)
chr8 (6-122)||(34477128-34477241)
chr8 (102-155)||(1261957-1262009)
chr8 (51-124)||(18141835-18141908)
chr8 (112-196)||(19175766-19175851)
chr8 (52-155)||(4456070-4456173)
chr8 (4-84)||(31513236-31513314)
chr8 (130-218)||(9765849-9765939)
chr8 (113-155)||(26287943-26287985)
chr8 (113-155)||(26301200-26301242)
chr8 (113-155)||(26313194-26313236)
chr8 (49-124)||(42435071-42435147)
chr8 (102-155)||(4760078-4760130)
chr8 (102-155)||(18853170-18853223)
chr8 (102-155)||(18870564-18870617)
chr8 (102-155)||(36979419-36979471)
chr8 (121-208)||(4696617-4696705)
chr8 (51-124)||(19491779-19491853)
chr8 (51-124)||(27811292-27811366)
chr8 (51-124)||(30143354-30143428)
[»] chr5 (33 HSPs)
chr5 (5-215)||(2630212-2630423)
chr5 (14-182)||(33030854-33031023)
chr5 (5-208)||(11181737-11181941)
chr5 (11-155)||(7160815-7160958)
chr5 (10-182)||(6741866-6742039)
chr5 (1-219)||(10281727-10281948)
chr5 (1-218)||(42127311-42127529)
chr5 (5-218)||(28832237-28832449)
chr5 (5-155)||(19588788-19588937)
chr5 (5-218)||(17003864-17004079)
chr5 (51-153)||(3880343-3880446)
chr5 (52-153)||(12084127-12084228)
chr5 (2-155)||(34842645-34842798)
chr5 (91-218)||(24553499-24553625)
chr5 (51-208)||(11916922-11917081)
chr5 (111-154)||(28537669-28537712)
chr5 (5-208)||(31300500-31300705)
chr5 (49-124)||(33831692-33831768)
chr5 (1-154)||(30899910-30900062)
chr5 (51-119)||(8566031-8566100)
chr5 (52-218)||(14520206-14520375)
chr5 (52-196)||(9353284-9353429)
chr5 (52-155)||(15464574-15464678)
chr5 (112-196)||(36932362-36932447)
chr5 (102-155)||(38192215-38192267)
chr5 (102-155)||(38219440-38219492)
chr5 (72-124)||(5887496-5887550)
chr5 (39-84)||(3651613-3651658)
chr5 (72-137)||(5611202-5611267)
chr5 (102-155)||(24135890-24135942)
chr5 (102-155)||(35387704-35387756)
chr5 (51-124)||(213479-213553)
chr5 (51-124)||(38747019-38747093)
[»] chr4 (38 HSPs)
chr4 (11-209)||(5112225-5112423)
chr4 (13-191)||(39774218-39774397)
chr4 (12-209)||(1983213-1983409)
chr4 (10-209)||(18377347-18377546)
chr4 (2-109)||(34670567-34670674)
chr4 (3-146)||(18912266-18912409)
chr4 (51-218)||(10047357-10047526)
chr4 (102-209)||(34495825-34495932)
chr4 (6-154)||(37781905-37782054)
chr4 (51-218)||(38152389-38152558)
chr4 (51-208)||(16623243-16623402)
chr4 (65-208)||(16630644-16630789)
chr4 (52-218)||(36315181-36315348)
chr4 (52-218)||(36329390-36329557)
chr4 (51-208)||(6743366-6743523)
chr4 (90-218)||(24333787-24333916)
chr4 (5-218)||(42599479-42599693)
chr4 (51-218)||(54867162-54867330)
chr4 (102-196)||(31985637-31985730)
chr4 (97-218)||(39245972-39246094)
chr4 (51-155)||(3796469-3796574)
chr4 (9-144)||(39593781-39593915)
chr4 (113-218)||(5269204-5269310)
chr4 (52-196)||(5396623-5396768)
chr4 (42-154)||(8114680-8114791)
chr4 (10-153)||(873428-873571)
chr4 (112-218)||(5143237-5143344)
chr4 (49-124)||(5871832-5871908)
chr4 (51-218)||(3777527-3777695)
chr4 (72-125)||(51337100-51337153)
chr4 (51-124)||(379394-379468)
chr4 (51-124)||(12073406-12073480)
chr4 (51-124)||(52467434-52467508)
chr4 (113-155)||(28468542-28468584)
chr4 (51-114)||(41964429-41964493)
chr4 (72-149)||(4956227-4956304)
chr4 (102-155)||(24741982-24742034)
chr4 (102-155)||(29760683-29760735)
[»] chr3 (56 HSPs)
chr3 (37-155)||(4386854-4386972)
chr3 (5-155)||(21353604-21353754)
chr3 (5-218)||(18552779-18552992)
chr3 (11-208)||(25795768-25795966)
chr3 (2-208)||(1417382-1417589)
chr3 (5-182)||(40844666-40844842)
chr3 (5-208)||(3328251-3328455)
chr3 (1-208)||(3715892-3716101)
chr3 (52-218)||(21711201-21711368)
chr3 (5-218)||(8370382-8370597)
chr3 (102-209)||(25929435-25929541)
chr3 (51-208)||(48438202-48438361)
chr3 (5-208)||(24695060-24695263)
chr3 (51-218)||(1736245-1736414)
chr3 (10-208)||(26298976-26299174)
chr3 (5-208)||(40592676-40592881)
chr3 (5-218)||(36029071-36029286)
chr3 (42-153)||(29100203-29100315)
chr3 (5-154)||(3323585-3323734)
chr3 (38-208)||(37466279-37466450)
chr3 (52-196)||(32143321-32143467)
chr3 (54-218)||(30709733-30709901)
chr3 (51-208)||(47923845-47924005)
chr3 (91-196)||(16264350-16264455)
chr3 (113-235)||(27986449-27986573)
chr3 (52-218)||(6794654-6794822)
chr3 (10-142)||(8126685-8126817)
chr3 (51-124)||(760861-760935)
chr3 (51-124)||(22835082-22835156)
chr3 (52-196)||(27974893-27975039)
chr3 (5-137)||(5366218-5366351)
chr3 (32-109)||(25517070-25517147)
chr3 (102-143)||(25929365-25929406)
chr3 (102-155)||(27453000-27453052)
chr3 (51-124)||(46860488-46860562)
chr3 (52-124)||(9581297-9581370)
chr3 (72-124)||(23391989-23392043)
chr3 (52-155)||(26928541-26928646)
chr3 (72-124)||(32744516-32744570)
chr3 (72-124)||(54593738-54593792)
chr3 (10-80)||(25929296-25929365)
chr3 (113-155)||(33386669-33386711)
chr3 (102-155)||(1305990-1306042)
chr3 (102-155)||(2671589-2671641)
chr3 (102-155)||(7167286-7167338)
chr3 (102-155)||(8477404-8477456)
chr3 (102-155)||(8739066-8739118)
chr3 (102-155)||(9091304-9091356)
chr3 (72-137)||(21156489-21156554)
chr3 (113-218)||(39039995-39040103)
chr3 (102-155)||(40372798-40372850)
chr3 (74-106)||(2075156-2075188)
chr3 (51-124)||(29196466-29196541)
chr3 (51-124)||(29682373-29682447)
chr3 (51-124)||(32891117-32891192)
chr3 (51-124)||(39153441-39153515)
[»] chr1 (40 HSPs)
chr1 (2-188)||(17345421-17345607)
chr1 (13-191)||(22819433-22819613)
chr1 (5-182)||(35109442-35109619)
chr1 (46-146)||(9023785-9023885)
chr1 (3-208)||(32889427-32889634)
chr1 (5-218)||(47703840-47704055)
chr1 (51-218)||(19072905-19073075)
chr1 (51-218)||(19120795-19120965)
chr1 (51-208)||(16124466-16124625)
chr1 (5-217)||(47098730-47098942)
chr1 (51-218)||(9476239-9476408)
chr1 (5-154)||(32736901-32737050)
chr1 (51-218)||(29651789-29651958)
chr1 (1-217)||(47102740-47102959)
chr1 (51-218)||(13598376-13598545)
chr1 (90-208)||(27104362-27104481)
chr1 (11-155)||(918390-918535)
chr1 (5-127)||(10997026-10997149)
chr1 (52-218)||(26644849-26645018)
chr1 (1-155)||(3019772-3019926)
chr1 (48-137)||(11032268-11032357)
chr1 (52-155)||(19358794-19358898)
chr1 (52-155)||(24202720-24202824)
chr1 (52-155)||(3281750-3281853)
chr1 (5-137)||(8281378-8281510)
chr1 (5-130)||(40816721-40816844)
chr1 (112-218)||(775650-775757)
chr1 (102-155)||(19361435-19361487)
chr1 (102-155)||(19380075-19380127)
chr1 (51-124)||(8550867-8550941)
chr1 (72-124)||(834247-834301)
chr1 (5-59)||(11031378-11031433)
chr1 (49-125)||(15820319-15820396)
chr1 (76-143)||(48382457-48382524)
chr1 (49-124)||(31659250-31659326)
chr1 (49-124)||(47255420-47255496)
chr1 (11-152)||(37918704-37918843)
chr1 (91-155)||(21536561-21536624)
chr1 (51-124)||(41360928-41361002)
chr1 (51-124)||(46064932-46065006)
[»] scaffold0078 (1 HSPs)
scaffold0078 (10-209)||(23517-23718)
[»] scaffold0016 (1 HSPs)
scaffold0016 (5-154)||(102399-102548)
[»] scaffold0002 (1 HSPs)
scaffold0002 (5-205)||(14674-14876)
[»] scaffold0148 (1 HSPs)
scaffold0148 (65-208)||(10717-10862)
[»] scaffold0006 (2 HSPs)
scaffold0006 (51-218)||(5661-5830)
scaffold0006 (51-218)||(2470-2639)
[»] scaffold0176 (1 HSPs)
scaffold0176 (5-153)||(17307-17454)
[»] scaffold0036 (1 HSPs)
scaffold0036 (51-155)||(85725-85829)
[»] scaffold0087 (1 HSPs)
scaffold0087 (52-155)||(43913-44016)
[»] scaffold0140 (1 HSPs)
scaffold0140 (112-210)||(8431-8532)
[»] scaffold0188 (2 HSPs)
scaffold0188 (102-155)||(17955-18007)
scaffold0188 (102-155)||(24048-24100)
[»] scaffold0076 (1 HSPs)
scaffold0076 (49-138)||(15937-16026)
[»] scaffold0236 (1 HSPs)
scaffold0236 (72-124)||(10525-10577)
[»] scaffold0466 (1 HSPs)
scaffold0466 (49-124)||(7339-7415)


Alignment Details
Target: chr6 (Bit Score: 185; Significance: 1e-100; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 2 - 240
Target Start/End: Original strand, 31076838 - 31077082
Alignment:
Q  2 tttctttagtgttttctcttaggattcatagtgattgtgagtgacttgaaa-----aatgggtaaaatttaggtcttgttctttgtgagctcttaagcta 96  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||     ||||| ||||| |||||||||||||||||||| |||||||||||    
T  31076838 tttctttagtgttttctcttaggattcatagtgattgtgggtgacttgaaattaaaaatggataaaaattaggtcttgttctttgtgaactcttaagcta 31076937  T
Q  97 atttattgtaacccatttgtatcacttttatcttagtggattggagagctgctctctcc-agagagtatgtcatattggaccaaactaggttaccaatct 195  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| |||||||||||| ||||||||||||||||||    
T  31076938 atttattgtaacccatttgtatcacttttatcttagtggattggagagctgctatctcctagagagtaggtcatattggactaaactaggttaccaatct 31077037  T
Q  196 tggtatgtttgtttcattctttctggcttatatttgttgcctttg 240  Q
    |||||||||||||||||||||||||||||||||||||||| ||||    
T  31077038 tggtatgtttgtttcattctttctggcttatatttgttgcttttg 31077082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 5 - 186
Target Start/End: Complemental strand, 14521865 - 14521684
Alignment:
Q  5 ctttagtgttttctcttaggattcatagtgattgtgagtgacttgaaaaatgggtaaaatttaggtcttgttctttgtgagctcttaagctaatttattg 104  Q
    ||||| ||||||||||||||||| || | || |||| ||||| ||||||||| ||| || ||||||  ||||||||||||||||||  |||||||| |||    
T  14521865 ctttaatgttttctcttaggatttattgagagtgtgggtgacatgaaaaatgtgtagaaattaggttgtgttctttgtgagctcttgtgctaattt-ttg 14521767  T
Q  105 taacccatttgtatcacttttatcttagtggattggagagctgctctctcc-agagagtatgtcatattggaccaaactaggt 186  Q
    |||| ||||||||||||||| |||||| || ||||||||| ||||||||||  ||||||| ||||||||||||| ||||||||    
T  14521766 taactcatttgtatcactttcatcttattgaattggagaggtgctctctcctcgagagtaggtcatattggaccgaactaggt 14521684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 5 - 208
Target Start/End: Complemental strand, 31979705 - 31979501
Alignment:
Q  5 ctttagtgttttctcttaggattcatagtgattgtgagtgacttgaaaaatgggtaaaatttaggtcttgttcttt-gtgagctcttaagctaatttatt 103  Q
    |||| ||||||||||||||||||||| | || |||| |||||   ||||||||||| || |||||||||||||||| || ||||  |||| |||||| ||    
T  31979705 cttttgtgttttctcttaggattcattgagagtgtgggtgacac-aaaaatgggtagaaattaggtcttgttcttttgtaagcttataagttaatttctt 31979607  T
Q  104 gtaacccatttgtatcacttttatcttagtggattggagagctgctctct-ccagagagtatgtcatattggaccaaactaggttaccaatcttggtatg 202  Q
    ||||| | |||| | |||||| ||||||||||||||||| |||||||||| ||  ||| |||||||||||||||| |||| ||| | |||||||||| ||    
T  31979606 gtaactcttttgcaacactttcatcttagtggattggagggctgctctctcccccagattatgtcatattggaccgaactgggtcaacaatcttggtgtg 31979507  T
Q  203 tttgtt 208  Q
    ||||||    
T  31979506 tttgtt 31979501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 5 - 204
Target Start/End: Original strand, 1115009 - 1115208
Alignment:
Q  5 ctttagtgttttctcttaggattcatagtgattgtgagtgacttgaaaaatgggtaaaatttaggtcttgttctttgtgagctcttaagctaatttattg 104  Q
    |||| |||||||||||||  |||||| |||| |||| |||||||||||||||| || || |||||  ||||| ||| |||||| ||||| | |||| |||    
T  1115009 cttttgtgttttctcttaatattcattgtgagtgtgggtgacttgaaaaatggatagaaattagggtttgttatttttgagcttttaagttgatttcttg 1115108  T
Q  105 taacccatttgtatcacttttatcttagtggattggagagctgctctctccagagagtatgtcatattggaccaaactaggttaccaatcttggtatgtt 204  Q
    ||||| |||||||||| | ||||| |||||||||||||| |||||||||||||| ||||  ||||  |||||| || ||||| | |||| ||||| ||||    
T  1115109 taacctatttgtatcattcttatcatagtggattggagatctgctctctccagatagtaaatcattatggaccgaattaggtaaacaatattggtgtgtt 1115208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 208
Target Start/End: Original strand, 5572147 - 5572350
Alignment:
Q  5 ctttagtgttttctcttaggattcatagtgattgtgagtgacttgaaaaatgggtaaaatttaggtcttgttctt-tgtgagctcttaagctaatttatt 103  Q
    |||| ||||||||||||||||||||| | || |||| |||||    |||||| ||| || ||||||||||||||| ||| ||||  ||||||||||| ||    
T  5572147 cttttgtgttttctcttaggattcattgagagtgtgggtgacac--aaaatgcgtagaaattaggtcttgttcttgtgtaagcttataagctaatttctt 5572244  T
Q  104 gtaacccatttgtatcacttttatcttagtggattggagagctgctctct-ccagagagtatgtcatattggaccaaactaggttaccaatcttggtatg 202  Q
    ||||| | |||||| |||||| ||| ||||||||||||| |||||||||| ||  ||| || ||||||||||||| || | ||| | |||||||||| ||    
T  5572245 gtaactcttttgtaacactttcatcatagtggattggagggctgctctctcccctagattaggtcatattggaccgaattgggtcaacaatcttggtgtg 5572344  T
Q  203 tttgtt 208  Q
    ||||||    
T  5572345 tttgtt 5572350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 209
Target Start/End: Original strand, 24435876 - 24436080
Alignment:
Q  5 ctttagtgttttctcttaggattcatagtgattgtgagtgacttgaaaaatgggtaaaatttaggtcttgttcttt-gtgagctcttaagctaatttatt 103  Q
    |||| |||||||||||||||||||||  ||| |||| ||||  | ||||||||||| || |||||||||||| ||| || ||||  ||||||||||| ||    
T  24435876 cttttgtgttttctcttaggattcattatgaatgtgggtgatat-aaaaatgggtagaaattaggtcttgtttttttgtaagcttataagctaatttctt 24435974  T
Q  104 gtaacccatttgtatcacttttatcttagtggattggagagctgctctct-ccagagagtatgtcatattggaccaaactaggttaccaatcttggtatg 202  Q
    ||||  |||||||| || ||| ||| |||||||| |||| |||||||||| ||  |||||| ||||||||||| | |||| ||||||| |||||||| ||    
T  24435975 gtaattcatttgtaacattttcatcctagtggatcggagggctgctctctcccctagagtaggtcatattggatcgaactgggttacc-atcttggtgtg 24436073  T
Q  203 tttgttt 209  Q
    |||||||    
T  24436074 tttgttt 24436080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 51 - 218
Target Start/End: Original strand, 10077115 - 10077284
Alignment:
Q  51 aaaatgggtaaaatttaggtcttgttcttt-gtgagctcttaagctaatttattgtaacccatttgtatcacttttatcttagtggattggagagctgct 149  Q
    |||||||||| || |||||||||||||||| || ||||  ||||||||||| |||||||   |||||| |||||| ||| ||||||||||||| ||||||    
T  10077115 aaaatgggtagaaattaggtcttgttcttttgtaagcttataagctaatttcttgtaacttttttgtaacactttcatcatagtggattggagggctgct 10077214  T
Q  150 ctct-ccagagagtatgtcatattggaccaaactaggttaccaatcttggtatgtttgtttcattctttc 218  Q
    |||| ||  ||| || ||||||||||||| || | ||| | |||||||||| |||||||| | |||||||    
T  10077215 ctctcccccagattaggtcatattggaccgaattgggtcaacaatcttggtgtgtttgttcctttctttc 10077284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 11 - 218
Target Start/End: Original strand, 31086384 - 31086592
Alignment:
Q  11 tgttttctcttaggattcat-agtgattgtgagtgacttgaaaaatgggtaaaatttaggtcttgttctt-tgtgagctcttaagctaatttattgtaac 108  Q
    |||||||||||||||||||| | ||| |||| |||||    |||||||||| || |||||||||| |||| ||| ||||  ||||||||||| |||||||    
T  31086384 tgttttctcttaggattcattattgagtgtgggtgacac--aaaatgggtagaaattaggtcttgctcttgtgtaagcttataagctaatttcttgtaac 31086481  T
Q  109 ccatttgtatcacttttatcttagtggattggagagctgctctctccag-agagtatgtcatattggaccaaactaggttaccaatcttggtatgtttgt 207  Q
     | |||||| |||||| ||| ||||||||||||||| ||||||||||   ||| ||  |||||||||||  |||| ||| | |||||||||| |||||||    
T  31086482 tcctttgtaacactttcatcatagtggattggagagttgctctctcccctagattagatcatattggactgaactgggtcaacaatcttggtgtgtttgt 31086581  T
Q  208 ttcattctttc 218  Q
    | | |||||||    
T  31086582 tcctttctttc 31086592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 51 - 155
Target Start/End: Original strand, 21801294 - 21801399
Alignment:
Q  51 aaaatgggtaaaatttaggtcttgttcttt-gtgagctcttaagctaatttattgtaacccatttgtatcacttttatcttagtggattggagagctgct 149  Q
    |||||||||| || ||| |||||||||||| || ||||  |||| |||||| ||||||| | |||||| |||||||||||||||||||||||||||||||    
T  21801294 aaaatgggtagaaattaagtcttgttcttttgtaagcttataagataatttcttgtaactcttttgtaacacttttatcttagtggattggagagctgct 21801393  T
Q  150 ctctcc 155  Q
    | ||||    
T  21801394 cgctcc 21801399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 50 - 218
Target Start/End: Complemental strand, 22963846 - 22963678
Alignment:
Q  50 aaaaatgggtaaaatttaggtcttgttctttgtgagctcttaagctaatttattgtaacccatttgtatcacttttatcttagtggattggagagctgct 149  Q
    ||||||||||| || ||| | |||||| | ||| || |  ||||||||||| ||||||| | |||||| |||||| ||| ||||||||||||| ||||||    
T  22963846 aaaaatgggtagaaattacggcttgttttgtgtaaggttataagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgct 22963747  T
Q  150 ctctccagagagtatgtcatattggaccaaactaggttaccaatcttggtatgtttgtttcattctttc 218  Q
    ||||||  ||| |  ||||||||| ||| |||| ||| | |||||||||| |||||||| | |||||||    
T  22963746 ctctccccagatttggtcatattgcaccgaactgggtcaacaatcttggtgtgtttgttcctttctttc 22963678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 50 - 218
Target Start/End: Original strand, 23824547 - 23824715
Alignment:
Q  50 aaaaatgggtaaaatttaggtcttgttctttgtgagctcttaagctaatttattgtaacccatttgtatcacttttatcttagtggattggagagctgct 149  Q
    ||||||||||| || ||| | |||||| | ||| || |  ||||||||||| ||||||| | |||||| |||||| ||| ||||||||||||| ||||||    
T  23824547 aaaaatgggtagaaattacggcttgttttgtgtaaggttataagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgct 23824646  T
Q  150 ctctccagagagtatgtcatattggaccaaactaggttaccaatcttggtatgtttgtttcattctttc 218  Q
    ||||||  ||| |  ||||||||| ||| |||| ||| | |||||||||| |||||||| | |||||||    
T  23824647 ctctccccagatttggtcatattgcaccgaactgggtcaacaatcttggtgtgtttgttcctttctttc 23824715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 113 - 208
Target Start/End: Complemental strand, 31936671 - 31936575
Alignment:
Q  113 ttgtatcacttttatcttagtggattggagagctgctctctc-cagagagtatgtcatattggaccaaactaggttaccaatcttggtatgtttgtt 208  Q
    ||||| |||||| || |||||||||||||||||||||||||| |  ||| || ||||||||||||| |||||||| | |||||||||| ||||||||    
T  31936671 ttgtaacactttcatattagtggattggagagctgctctctctcccagactaggtcatattggaccgaactaggtcaacaatcttggtgtgtttgtt 31936575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 51 - 153
Target Start/End: Complemental strand, 4630101 - 4629998
Alignment:
Q  51 aaaatgggtaaaatttaggtcttgttcttt-gtgagctcttaagctaatttattgtaacccatttgtatcacttttatcttagtggattggagagctgct 149  Q
    ||||| |||| || |||||||||||||||| || ||||  |||| |||||| |||||||   |||||| |||||| ||||||||||||||||||||||||    
T  4630101 aaaataggtagaaattaggtcttgttcttttgtaagcttataagttaatttcttgtaactattttgtaacactttcatcttagtggattggagagctgct 4630002  T
Q  150 ctct 153  Q
    ||||    
T  4630001 ctct 4629998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 5 - 137
Target Start/End: Original strand, 33721463 - 33721596
Alignment:
Q  5 ctttagtgttttctcttaggattca--tagtgattgtgagtgacttgaaaaatgggtaaaatttaggtcttgttctttgtgagctcttaagctaatttat 102  Q
    |||||||||||||||||||||||||  ||| || |||| ||||| | |||||||||  ||| |||||| ||||||||| |||| | |||| ||||||| |    
T  33721463 ctttagtgttttctcttaggattcatttag-gagtgtgtgtgacctaaaaaatgggggaaaattaggttttgttctttatgagtttttaaactaatttct 33721561  T
Q  103 tgtaacccatttgtatcacttttatcttagtggat 137  Q
    |||||||  ||||||| | | ||||| ||||||||    
T  33721562 tgtaacctctttgtataattcttatcatagtggat 33721596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 52 - 196
Target Start/End: Original strand, 5757430 - 5757575
Alignment:
Q  52 aaatgggtaaaatttaggtcttgttctt-tgtgagctcttaagctaatttattgtaacccatttgtatcacttttatcttagtggattggagagctgctc 150  Q
    ||||||||| || ||||||||||||||| | | ||||   |||||| ||| ||||||| | |||||| |||||| ||| |||||||||||||||||||||    
T  5757430 aaatgggtagaaattaggtcttgttcttgtataagcttgcaagctattttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgctc 5757528  T
Q  151 tct-ccagagagtatgtcatattggaccaaactaggttaccaatctt 196  Q
    ||| ||  ||| || ||||||||||||| |||| ||| | |||||||    
T  5757529 tctcccccagattaggtcatattggaccgaactgggtcaacaatctt 5757575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 51 - 155
Target Start/End: Complemental strand, 18232992 - 18232887
Alignment:
Q  51 aaaatgggtaaaatttaggtcttgttctt-tgtgagctcttaagctaatttattgtaacccatttgtatcacttttatcttagtggattggagagctgct 149  Q
    |||||||||| || ||||||||||||||| ||| ||||  |||||| |||| ||||||| | |||||| |||||| ||| ||||| ||||||| | ||||    
T  18232992 aaaatgggtagaaattaggtcttgttcttgtgtaagcttataagctgatttcttgtaactcttttgtaacactttcatcatagtgaattggagggttgct 18232893  T
Q  150 ctctcc 155  Q
    ||||||    
T  18232892 ctctcc 18232887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 137
Target Start/End: Original strand, 30518033 - 30518165
Alignment:
Q  5 ctttagtgttttctcttaggattcata-gtgattgtgagtgacttgaaaaatgggta-aaatttaggtcttgttctttgtgagctcttaagctaatttat 102  Q
    |||||||||||||||| || ||||||  |||| |||| || ||||||||||| |||| ||||| |||| ||||||||||||| || ||||| || |||      
T  30518033 ctttagtgttttctctaag-attcatttgtgagtgtgggtaacttgaaaaataggtagaaattaaggt-ttgttctttgtgaacttttaagttagtttca 30518130  T
Q  103 tgtaacccatttgtatcacttttatcttagtggat 137  Q
    |||||||  ||||||||||| ||||| ||||||||    
T  30518131 tgtaacctctttgtatcactcttatcatagtggat 30518165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 108
Target Start/End: Complemental strand, 99339 - 99245
Alignment:
Q  13 ttttctcttaggattcatagtgattgtgagtgacttgaaaaatgggta-aaatttaggtcttgttctttgtgagctcttaagctaatttattgtaac 108  Q
    ||||||| |||||||||| |||| ||||||| |||| ||||||||||| ||||| | || ||||||| ||||||||  ||||||||||| |||||||    
T  99339 ttttctcataggattcattgtgagtgtgagtaactt-aaaaatgggtagaaattaaagt-ttgttctctgtgagcttctaagctaatttcttgtaac 99245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 124
Target Start/End: Complemental strand, 2973093 - 2973019
Alignment:
Q  51 aaaatgggtaaaatttaggtcttgttctttgtgagctctt--aagctaatttattgtaacccatttgtatcacttt 124  Q
    |||||||||| || |||||| ||||||||||||||||  |  |||||||||| |||||||||||||||||| ||||    
T  2973093 aaaatgggtagaaattaggt-ttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt 2973019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 210
Target Start/End: Complemental strand, 21356114 - 21356020
Alignment:
Q  119 cacttttatcttagtggattggagagctgctctctcc-agagagtatgtcatattggaccaaactaggttaccaatc--ttggtatgtttgtttc 210  Q
    |||||| ||| ||||||||||||||||||||||||||   ||| || ||||||||||||| |||| ||| | |||||  ||||| ||||||||||    
T  21356114 cactttcatcatagtggattggagagctgctctctcctccagattaggtcatattggaccgaactgggtcaacaatcttttggtgtgtttgtttc 21356020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 155
Target Start/End: Complemental strand, 22709102 - 22709060
Alignment:
Q  113 ttgtatcacttttatcttagtggattggagagctgctctctcc 155  Q
    ||||| |||||| ||| ||||||||||||||||||||||||||    
T  22709102 ttgtaacactttcatcatagtggattggagagctgctctctcc 22709060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 118
Target Start/End: Complemental strand, 28137562 - 28137494
Alignment:
Q  51 aaaatgggtaaaatttaggtcttgttctttgtgagctc--ttaagctaatttattgtaacccatttgtat 118  Q
    |||||||||| || |||||  ||||||||||||||||   |||||||||||| |||||||||||||||||    
T  28137562 aaaatgggtagaaattaggg-ttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtat 28137494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 155
Target Start/End: Original strand, 5674773 - 5674825
Alignment:
Q  102 ttgtaacccatttgtatcacttttatcttagtggattggagagctgctctctcc 155  Q
    ||||||||| |||||| |||||| ||| || |||||||||||||||||||||||    
T  5674773 ttgtaaccc-tttgtaacactttcatcatattggattggagagctgctctctcc 5674825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 109
Target Start/End: Original strand, 16569047 - 16569107
Alignment:
Q  51 aaaatgggtaaaatttaggtcttgttctttgtgagct--cttaagctaatttattgtaacc 109  Q
    |||||||||| || |||||| ||||||||||||||||   |||||||||||| ||||||||    
T  16569047 aaaatgggtagaaattaggttttgttctttgtgagcttgtttaagctaatttcttgtaacc 16569107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 79
Target Start/End: Complemental strand, 31936764 - 31936695
Alignment:
Q  10 gtgttttctcttaggattcatagtgattgtgagtgacttgaaaaatgggtaaaatttaggtcttgttctt 79  Q
    ||||||||||||||||||||| | || |||| ||||  ||||||||||||| || |||||  ||||||||    
T  31936764 gtgttttctcttaggattcattgagagtgtgggtgatatgaaaaatgggtagaaattaggatttgttctt 31936695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 124
Target Start/End: Original strand, 17758037 - 17758111
Alignment:
Q  51 aaaatgggtaaaatttaggtcttgttctttgtgagctctt--aagctaatttattgtaacccatttgtatcacttt 124  Q
    |||||||||| || |||||  ||||||||||||||||  |  |||||||||| |||||||||||||||||| ||||    
T  17758037 aaaatgggtagaaattaggg-ttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt 17758111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 124
Target Start/End: Original strand, 21588945 - 21589019
Alignment:
Q  51 aaaatgggtaaaatttaggtcttgttctttgtgagctctt--aagctaatttattgtaacccatttgtatcacttt 124  Q
    |||||||||| || |||||  ||||||||||||||||  |  |||||||||| |||||||||||||||||| ||||    
T  21588945 aaaatgggtagaaattaggg-ttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt 21589019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 124
Target Start/End: Original strand, 21593678 - 21593752
Alignment:
Q  51 aaaatgggtaaaatttaggtcttgttctttgtgagctctt--aagctaatttattgtaacccatttgtatcacttt 124  Q
    |||||||||| || |||||  ||||||||||||||||  |  |||||||||| |||||||||||||||||| ||||    
T  21593678 aaaatgggtagaaattaggg-ttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt 21593752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 114
Target Start/End: Complemental strand, 22424983 - 22424917
Alignment:
Q  49 gaaaaatgggtaaaatttaggtcttgttctttgtgagctc--ttaagctaatttattgtaacccattt 114  Q
    |||||||||||| || |||||  ||||||||||||||||   |||||||||||| |||||||||||||    
T  22424983 gaaaaatgggtagaaattaggg-ttgttctttgtgagcttgtttaagctaatttcttgtaacccattt 22424917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 151
Target Start/End: Complemental strand, 27165797 - 27165729
Alignment:
Q  84 agctcttaagctaatttatt-gtaacccatttgtatcacttttatcttagtggattggagagctgctct 151  Q
    |||||||| |||||||| || |||||||  |||||||||||| |||||||| |||||||| ||| ||||    
T  27165797 agctcttatgctaatttttttgtaaccccgttgtatcactttcatcttagttgattggagggctactct 27165729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 33690736 - 33690812
Alignment:
Q  11 tgttttctcttaggattcatagtgattgtgagtgacttgaaaaatgggtaaaatttaggtcttgttctttgtgagct 87  Q
    |||||| ||||||||||||| |||  | ||||||||||||||| || ||| || ||||  |||||||||| ||||||    
T  33690736 tgttttttcttaggattcatcgtgggtttgagtgacttgaaaagtgtgtagaaattagagcttgttctttttgagct 33690812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 105; Significance: 1e-52; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 5 - 208
Target Start/End: Original strand, 5817175 - 5817379
Alignment:
Q  5 ctttagtgttttctcttaggattcatagtgattgtgagtgacttgaaaaatgggtaaaatttaggtcttgttctttgtgagctcttaagctaatttattg 104  Q
    |||| ||||||| ||||||||||||| | || ||||||||||||||||||||| || || |||||| |||||||||||||||||||| || ||||| |||    
T  5817175 cttttgtgttttttcttaggattcattgagagtgtgagtgacttgaaaaatggatagaaattaggttttgttctttgtgagctcttatgcaaatttcttg 5817274  T
Q  105 taacccatttgtatcacttttatcttagtggattggagagctgctctctccagagagtatgtcatattggaccaaactaggttaccaatc-ttggtatgt 203  Q
    |||||| ||||||||||||| || |||||||||||||||||||||||||||  |||||| ||||||||||||| ||||  |||| ||||| ||||| |||    
T  5817275 taacccctttgtatcactttcatattagtggattggagagctgctctctccccagagtaggtcatattggaccgaactgagttaacaatctttggtgtgt 5817374  T
Q  204 ttgtt 208  Q
    |||||    
T  5817375 ttgtt 5817379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 47 - 235
Target Start/End: Original strand, 28617172 - 28617362
Alignment:
Q  47 ttgaaaaatgggtaaaatttaggtcttgttctttgtgagctcttaagctaatttattgtaacccatttgtatcacttttatcttagtggattggagagct 146  Q
    ||||||||| |||| || |||||| |||||||||||||||| |||||||||||| |||||||||  |||||||||||| |||||||||||||||||||||    
T  28617172 ttgaaaaataggtagaaattaggttttgttctttgtgagcttttaagctaatttcttgtaaccccattgtatcactttcatcttagtggattggagagct 28617271  T
Q  147 gctctct-ccagagagtatgtcatattggaccaaactaggttaccaatcttggtatgtttg-tttcattctttctggcttatatttgttgc 235  Q
    ||||||| ||  |||||| ||||||||||||| |||| ||| | |||| ||||| |||||| |||| | |||||| |||||| ||||||||    
T  28617272 gctctctcccccagagtaggtcatattggaccgaactgggtaaacaatattggtgtgtttgttttcttcctttcttgcttatctttgttgc 28617362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 5 - 218
Target Start/End: Complemental strand, 20284281 - 20284067
Alignment:
Q  5 ctttagtgttttctcttaggattcatagtgattgtgagtgacttgaaaaatgggtaaaatttaggtcttgttc-tttgtgagctcttaagctaatttatt 103  Q
    |||| ||||||||||||||||||||| | || |||| ||||  ||||||| ||||| || ||||| ||||||| ||||| ||||  ||||||||||| ||    
T  20284281 cttttgtgttttctcttaggattcattgagagtgtgggtgatatgaaaaaagggtagaaattaggacttgttcttttgtaagcttataagctaatttctt 20284182  T
Q  104 gtaacccatttgtatcacttttatcttagtggattggagagctgctctct-ccagagagtatgtcatattggaccaaactaggttaccaatcttggtatg 202  Q
    ||||| || ||||| |||||| ||||||||||||||||| |||||||||| ||  ||| || ||||||||||||| |||| ||| | |||||||||| ||    
T  20284181 gtaacgca-ttgtaacactttcatcttagtggattggagggctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatcttggtgtg 20284083  T
Q  203 tttgtttcattctttc 218  Q
    |||||| | |||||||    
T  20284082 tttgttcctttctttc 20284067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 5 - 208
Target Start/End: Complemental strand, 29159997 - 29159791
Alignment:
Q  5 ctttagtgttttctcttaggattcata--gtgattgtgagtgacttgaaaaatgggtaaaatttaggtcttgttctt-tgtgagctcttaagctaattta 101  Q
    |||| ||||||||||||||||||||||  ||||  ||| |||||   ||||||||||| || ||||||||||||||| ||| ||||  |||||||||||     
T  29159997 cttttgtgttttctcttaggattcatattgtgagagtgggtgacac-aaaaatgggtagaaattaggtcttgttcttgtgtaagcttgtaagctaatttc 29159899  T
Q  102 ttgtaacccatttgtatcacttttatcttagtggattggagagctgctctct-ccagagagtatgtcatattggaccaaactaggttaccaatcttggta 200  Q
    ||||||| | |||||| |||||| ||| |||||||||||||||||||||||| ||  ||| || ||||||||||||| |||| ||| | ||||||||||     
T  29159898 ttgtaactcttttgtaacactttcatcatagtggattggagagctgctctctcccctagattaggtcatattggaccgaactgggtcaacaatcttggtg 29159799  T
Q  201 tgtttgtt 208  Q
    ||||||||    
T  29159798 tgtttgtt 29159791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 5 - 209
Target Start/End: Complemental strand, 3047446 - 3047242
Alignment:
Q  5 ctttagtgttttctcttaggattcatagtgattgtgagtgacttgaaaaatgggtaaaatttaggtcttgttctttgtgagctcttaagctaatttattg 104  Q
    |||| ||||||| ||||| ||||||| | || |||| ||||||| ||||||||||| || ||||||||||||||||||||||| ||||| | |||| |||    
T  3047446 cttttgtgttttatcttaagattcattgagagtgtgggtgactt-aaaaatgggtagaaattaggtcttgttctttgtgagcttttaagttgatttcttg 3047348  T
Q  105 taacccatttgtatcacttttatcttagtggattggagagctgctctctccag--agagtatgtcatattggaccaaactaggttaccaatcttggtatg 202  Q
    |||| |||||||| |||||| || ||||||||||||| | | |||||||||    |||| | ||||||||||||| |||| ||||| | |||||||| ||    
T  3047347 taactcatttgtaccactttcatattagtggattggataacggctctctccccccagagcaggtcatattggaccgaactgggtta-cgatcttggtgtg 3047249  T
Q  203 tttgttt 209  Q
    |||||||    
T  3047248 tttgttt 3047242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 51 - 208
Target Start/End: Complemental strand, 56094 - 55936
Alignment:
Q  51 aaaatgggtaaaatttaggtcttgttctt-tgtgagctcttaagctaatttattgtaacccatttgtatcacttttatcttagtggattggagagctgct 149  Q
    |||||||||| || ||||||||||||||| ||| ||||  ||||||||||| ||||||| | |||||| |||||| ||| ||||||||||||| ||||||    
T  56094 aaaatgggtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgct 55995  T
Q  150 ctctccagagagtatgtcatattggaccaaactaggttaccaatcttggtatgtttgtt 208  Q
    ||||||  ||| || ||||||||||||| |||| ||| |  ||||||||| ||||||||    
T  55994 ctctccccagattaggtcatattggaccgaactgggtcaataatcttggtgtgtttgtt 55936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 5 - 208
Target Start/End: Complemental strand, 2580582 - 2580378
Alignment:
Q  5 ctttagtgttttctcttaggattcatagtgattgtgagtgacttgaaaaatgggtaaaatttaggtcttgttctt-tgtgagctcttaagctaatttatt 103  Q
    |||| ||||||||||||||||||||| | || |||| ||||  ||||||||||||| ||  |||| ||||||||| ||| ||||   |||||| ||| ||    
T  2580582 cttttgtgttttctcttaggattcattgagagtgtgggtgatatgaaaaatgggtagaaactaggacttgttcttgtgtaagcttgcaagctattttctt 2580483  T
Q  104 gtaacccatttgtatcacttttatcttagtggattggagagctgctctct-ccagagagtatgtcatattggaccaaactaggttaccaatcttggtatg 202  Q
    ||||| |||| ||| |||||| |||||||||||||||||||||||||||| ||  ||| || ||||||||||||| || | ||| | |||||||||| ||    
T  2580482 gtaactcatt-gtaacactttcatcttagtggattggagagctgctctctcccccagactaggtcatattggaccgaattgggtcaacaatcttggtgtg 2580384  T
Q  203 tttgtt 208  Q
    ||||||    
T  2580383 tttgtt 2580378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 5 - 235
Target Start/End: Original strand, 23402918 - 23403150
Alignment:
Q  5 ctttagtgttttctcttaggattcatagtgattgtgagtgacttgaaaaatgggtaaaatttaggtcttgttc-tttgtgagctcttaagctaatttatt 103  Q
    |||| ||||||||||||||||||||| | || |||||||||  ||||||||||||| || ||||| ||||||| ||||| ||||  ||||||||||| ||    
T  23402918 cttttgtgttttctcttaggattcattgagagtgtgagtgatgtgaaaaatgggtagaaattaggacttgttcttttgtaagcttataagctaatttctt 23403017  T
Q  104 gtaacccatttgtatcacttttatcttagtggattggagagctgctctct-ccagagagtatgtcatattggaccaaactaggttaccaatcttggtatg 202  Q
    ||||| || ||||| |||||| |||||||| |||||||| ||||||| || ||  ||| || |||||||| |||| || | ||| | ||||||| || ||    
T  23403018 gtaactca-ttgtaacactttcatcttagtagattggagggctgctcactccctcagattaggtcatattagaccgaattgggtcaacaatcttagtgtg 23403116  T
Q  203 tttgtttcattctttc-tggcttatatttgttgc 235  Q
    |||||| | ||||||| | |||||||||| ||||    
T  23403117 tttgttcctttctttcattgcttatatttattgc 23403150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 51 - 218
Target Start/End: Original strand, 46516260 - 46516429
Alignment:
Q  51 aaaatgggtaaaatttaggtcttgttctt-tgtgagctcttaagctaatttattgtaacccatttgtatcacttttatcttagtggattggagagctgct 149  Q
    |||||||||| || ||| ||||||||||| ||| |||| |||||||||||| ||||||| | |||||| |||||| ||| ||||||||||||| ||||||    
T  46516260 aaaatgggtagaaattatgtcttgttcttgtgtaagcttttaagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgct 46516359  T
Q  150 ctct-ccagagagtatgtcatattggaccaaactaggttaccaatcttggtatgtttgtttcattctttc 218  Q
    |||| ||  ||| || ||||||||||||| |||| ||| | |||||||||| |||||||| | |||||||    
T  46516360 ctctcccctagattaggtcatattggaccgaactgggtcaacaatcttggtgtgtttgttcctttctttc 46516429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 10 - 218
Target Start/End: Original strand, 33332360 - 33332569
Alignment:
Q  10 gtgttttctcttaggattcatagtgattgtgagtgacttgaaaaatgggtaaaatttaggtcttgttcttt-gtgagctcttaagctaatttattgtaac 108  Q
    |||||||||||||||| |||| | || |||| |||| |  ||||||| ||| || |||||||||||||||| || ||||  ||||||||||| |||||||    
T  33332360 gtgttttctcttaggaatcattgagagtgtgcgtga-tacaaaaatgagtagaaattaggtcttgttcttttgtaagcttataagctaatttcttgtaac 33332458  T
Q  109 ccatttgtatcacttttatcttagtggattggagagctgctctct-ccagagagtatgtcatattggaccaaactaggttaccaatcttggtatgtttgt 207  Q
     | |||||| |||||| ||||||||||||||||| |||||||||| ||  ||| || |||||||| || | |||| ||| | |||||||||| |||||||    
T  33332459 tcttttgtaacactttcatcttagtggattggagggctgctctctcccccagattaggtcatattagatcgaactgggtcaacaatcttggtgtgtttgt 33332558  T
Q  208 ttcattctttc 218  Q
    | | |||||||    
T  33332559 tcctttctttc 33332569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 10 - 208
Target Start/End: Original strand, 9189917 - 9190117
Alignment:
Q  10 gtgttttctcttaggattcatagtgattgtgagtgacttgaaaaatgggtaaaatttaggtcttgttctt-tgtgagctcttaagctaattta-ttgtaa 107  Q
    |||||||||||||||||||||   || |||| ||||  ||||||||||||| || ||||| ||||||||| ||| ||||   |||||| |||  ||||||    
T  9189917 gtgttttctcttaggattcattaagagtgtgggtgatatgaaaaatgggtagaaattaggacttgttcttgtgtaagcttgcaagctatttttcttgtaa 9190016  T
Q  108 cccatttgtatcacttttatcttagtggattggagagctgctctct-ccagagagtatgtcatattggaccaaactaggttaccaatcttggtatgtttg 206  Q
    | |||| ||| |||||| |||||||||||||||||||||||||||| ||  ||| || ||||||||||||| |||| ||| | |||||||||| ||||||    
T  9190017 ctcatt-gtaacactttcatcttagtggattggagagctgctctctcccccagactaggtcatattggaccgaactgggtcaacaatcttggtgtgtttg 9190115  T
Q  207 tt 208  Q
    ||    
T  9190116 tt 9190117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 10 - 155
Target Start/End: Original strand, 2647607 - 2647751
Alignment:
Q  10 gtgttttctcttaggattcatagtgattgtgagtgacttgaaaaatgggtaaaatttaggtcttgttctt-tgtgagctcttaagctaatttattgtaac 108  Q
    ||||||||||||||||||||| | || |||| |||||    |||||||||| || ||||||||||||||| ||| ||||  ||||||||||| |||||||    
T  2647607 gtgttttctcttaggattcattgagagtgtgggtgacac--aaaatgggtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttgtaac 2647704  T
Q  109 ccatttgtatcacttttatcttagtggattggagagctgctctctcc 155  Q
     | |||||| |||||| ||| ||||||||||||| ||||||||||||    
T  2647705 tcttttgtaacactttcatcatagtggattggagggctgctctctcc 2647751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 53 - 218
Target Start/End: Complemental strand, 49091806 - 49091639
Alignment:
Q  53 aatgggtaaaatttaggtcttgttctt-tgtgagctcttaagctaatttattgtaacccatttgtatcacttttatcttagtggattggagagctgctct 151  Q
    |||||||| || ||||||||||||||| ||| ||||  |||| |||||| ||||||| | |||||| |||||| ||| ||||||||||||||| ||||||    
T  49091806 aatgggtagaaattaggtcttgttcttgtgtaagcttataaggtaatttcttgtaactcttttgtaacactttcatcatagtggattggagagttgctct 49091707  T
Q  152 c-tccagagagtatgtcatattggaccaaactaggttaccaatcttggtatgtttgtttcattctttc 218  Q
    | |||  ||| || |||||||||||| ||||| ||| | ||||||||||  ||||||| | |||||||    
T  49091706 cttccccagattaggtcatattggactaaactgggtcaacaatcttggtgcgtttgttcctttctttc 49091639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 51 - 208
Target Start/End: Complemental strand, 35960963 - 35960804
Alignment:
Q  51 aaaatgggtaaaatttaggtcttgttcttt-gtgagctcttaagctaatttattgtaacccatttgtatcacttttatcttagtggattggagagctgct 149  Q
    |||||||||| || |||||| ||||||||| || ||||  ||||||||||| || |||| |||||||| |||||| ||| |||||| |||||| ||||||    
T  35960963 aaaatgggtagaaattaggtattgttcttttgtaagcttataagctaatttcttctaactcatttgtaacactttcatcatagtggtttggagggctgct 35960864  T
Q  150 ctct-ccagagagtatgtcatattggaccaaactaggttaccaatcttggtatgtttgtt 208  Q
    |||| ||  ||| || ||||||||| ||| |||| ||| | |||||||||| ||||||||    
T  35960863 ctctcccccagattaggtcatattgaaccgaactcggtcaacaatcttggtgtgtttgtt 35960804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 10 - 208
Target Start/End: Original strand, 4796578 - 4796776
Alignment:
Q  10 gtgttttctcttaggattcatagtgattgtgagtgacttgaaaaatgggtaaaatttaggtcttgttctt-tgtgagctcttaagctaatttattgtaac 108  Q
    ||||||||||||||||||||| | || |||  |||||    |||||||||| || | ||||||||||||| ||| ||||  ||||||||||| |||||||    
T  4796578 gtgttttctcttaggattcattgagaatgtaggtgacac--aaaatgggtataaatgaggtcttgttcttgtgtaagcttataagctaatttcttgtaac 4796675  T
Q  109 ccatttgtatcacttttatcttagtggattggagagctgctctct-ccagagagtatgtcatattggaccaaactaggttaccaatcttggtatgtttgt 207  Q
     | |||||| || ||| ||| ||||||||| ||| |||||| ||| ||  ||| || ||||| ||||||| |||| ||||| |||||||||| |||||||    
T  4796676 tcttttgtaacaatttcatcatagtggatttgagggctgctttctcccccagattaggtcattttggaccgaactgggttaacaatcttggtgtgtttgt 4796775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 51 - 124
Target Start/End: Complemental strand, 38671376 - 38671302
Alignment:
Q  51 aaaatgggtaaaatttaggtcttgttctttgtgagctc--ttaagctaatttattgtaacccatttgtatcacttt 124  Q
    |||||||||| || |||||  ||||||||||||||||   |||||||||||||||||||| |||||||||||||||    
T  38671376 aaaatgggtagaaattaggg-ttgttctttgtgagcttgtttaagctaatttattgtaacacatttgtatcacttt 38671302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 195
Target Start/End: Complemental strand, 21983432 - 21983285
Alignment:
Q  51 aaaatgggtaaaatttaggtcttgttctt-tgtgagctcttaagctaatttattgtaacccattt-gtatcacttttatcttagtggattggagagctgc 148  Q
    |||||||||| ||  |||||||||||||| ||| ||||   |||||| ||| ||||||| | ||| ||| |||||| ||| |||||||||||||||||||    
T  21983432 aaaatgggtagaaactaggtcttgttcttgtgtaagcttgcaagctattttcttgtaactctttttgtaacactttcatcatagtggattggagagctgc 21983333  T
Q  149 tctct-ccagagagtatgtcatattggaccaaactaggttaccaatct 195  Q
    ||||| ||  ||| || ||||||||||||| |||| ||| | ||||||    
T  21983332 tctctcccccagattaggtcatattggaccgaactgggtcaacaatct 21983285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 761328 - 761255
Alignment:
Q  43 tgacttgaaaaatgggtaaaatttaggtcttgttctttgtgagctcttaagctaatttattgtaacccatttgt 116  Q
    |||||||||||||||||| || ||||   || ||||||||||||| || |||| ||||||||||||| ||||||    
T  761328 tgacttgaaaaatgggtagaaattagtgttttttctttgtgagcttttgagctcatttattgtaacctatttgt 761255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 113
Target Start/End: Original strand, 9235487 - 9235596
Alignment:
Q  5 ctttagtgttttctcttaggattcatagtgattgtgagtgacttgaaaaatgggtaaaatttaggtcttgttc-tttgtgagctcttaagctaatttatt 103  Q
    |||| ||||||||||||||||||| | | || || | ||||  ||||||||||||| || ||||| ||||||| ||||| ||||  ||||||||||| ||    
T  9235487 cttttgtgttttctcttaggattcgttgagagtgcgggtgatatgaaaaatgggtagaaattaggacttgttcttttgtaagcttataagctaatttctt 9235586  T
Q  104 gtaacccatt 113  Q
    ||||| ||||    
T  9235587 gtaactcatt 9235596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 102 - 155
Target Start/End: Complemental strand, 18413733 - 18413681
Alignment:
Q  102 ttgtaacccatttgtatcacttttatcttagtggattggagagctgctctctcc 155  Q
    ||||||||| |||||| |||||| ||| ||||||||||||||||||||||||||    
T  18413733 ttgtaaccc-tttgtaacactttcatcatagtggattggagagctgctctctcc 18413681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 52 - 155
Target Start/End: Complemental strand, 21639954 - 21639850
Alignment:
Q  52 aaatgggtaaaatttaggtcttgttctt-tgtgagctcttaagctaattta-ttgtaacccatttgtatcacttttatcttagtggattggagagctgct 149  Q
    ||||||||| ||| |||||||||||||| ||| ||||   |||||| |||  ||||||||| |||||| |||||| ||  ||||||||||||||||||||    
T  21639954 aaatgggtagaatctaggtcttgttcttgtgtaagcttgcaagctatttttcttgtaaccc-tttgtaacactttcattatagtggattggagagctgct 21639856  T
Q  150 ctctcc 155  Q
    ||||||    
T  21639855 ctctcc 21639850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 210
Target Start/End: Complemental strand, 2479479 - 2479321
Alignment:
Q  54 atgggtaaaatttaggtcttgttctt-tgtgagctcttaagctaatttattgtaacccatttgtatcacttttatcttagtggattggagagctgctctc 152  Q
    ||||||| || ||||||||||||||| ||| ||||   |||||| ||| || |||| | |||||| |||||| ||| ||||||||| |||||||||||||    
T  2479479 atgggtagaaattaggtcttgttcttgtgtaagcttgcaagctattttcttataactc-tttgtaacactttcatcatagtggatttgagagctgctctc 2479381  T
Q  153 tccagagagtatgtcatattggaccaaactaggttaccaatc--ttggtatgtttgtttc 210  Q
     ||  ||| || ||||||||| ||| |||| ||| | |||||  ||||| ||||||||||    
T  2479380 cccctagattaggtcatattgaaccgaactgggtcaacaatcttttggtgtgtttgtttc 2479321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 124
Target Start/End: Complemental strand, 41649166 - 41649091
Alignment:
Q  49 gaaaaatgggtaaaatttaggtcttgttctttgtgagctc-ttaagctaatttattgtaacccatttgtatcacttt 124  Q
    ||||||| |||| || |||||| ||||||||||||||||  || ||||||||| |||||||||||||||||| ||||    
T  41649166 gaaaaattggtagaaattaggt-ttgttctttgtgagcttgtttagctaatttcttgtaacccatttgtatcccttt 41649091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 155
Target Start/End: Original strand, 44848636 - 44848739
Alignment:
Q  52 aaatgggtaaaatttaggtcttgttctt-tgtgagctcttaagctaatttattgtaacccatttgtatcacttttatcttagtggattggagagctgctc 150  Q
    ||||||||| || ||||||||| ||||| ||| ||||   |||||  ||| ||||||| | |||||| |||||| ||| |||||||||||||||||||||    
T  44848636 aaatgggtagaaattaggtcttattcttgtgtaagcttgcaagcttttttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgctc 44848734  T
Q  151 tctcc 155  Q
    |||||    
T  44848735 tctcc 44848739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 72 - 124
Target Start/End: Original strand, 3259029 - 3259083
Alignment:
Q  72 ttgttctttgtgagctc--ttaagctaatttattgtaacccatttgtatcacttt 124  Q
    ||||||||||||||||   |||||||||||||||||||| |||||||||| ||||    
T  3259029 ttgttctttgtgagcttgtttaagctaatttattgtaactcatttgtatctcttt 3259083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 199
Target Start/End: Original strand, 9185178 - 9185265
Alignment:
Q  113 ttgtatcacttttatcttagtggattggagagctgctctct-ccagagagtatgtcatattggaccaaactaggttaccaatcttggt 199  Q
    ||||| |||||| ||||||||||||||||||||| |||||| ||  ||| || || |||||||||| |||| ||| | ||||||||||    
T  9185178 ttgtaacactttcatcttagtggattggagagcttctctctcccccagactaggttatattggaccgaactgggtcaacaatcttggt 9185265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 45685646 - 45685732
Alignment:
Q  1 ctttctttagtgttttctcttaggattcatagtgattgtgagtgacttgaaaaatgggta-aaatttaggtcttgttctttgtgagct 87  Q
    ||||||||  |||||||||||||||||||| | || | |||||||||| |||||||| || ||||| |||| ||||||||||| ||||    
T  45685646 ctttctttcttgttttctcttaggattcattgcgactttgagtgacttaaaaaatggatagaaattaaggt-ttgttctttgtcagct 45685732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 124
Target Start/End: Original strand, 2390294 - 2390370
Alignment:
Q  49 gaaaaatgggtaaaatttaggtcttgttctttgtgagctctt--aagctaatttattgtaacccatttgtatcacttt 124  Q
    |||||||||||| || |||||  ||||||||||||||||  |  |||||||||| |||||||||||||||||| ||||    
T  2390294 gaaaaatgggtagaaattaggg-ttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt 2390370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 155
Target Start/End: Complemental strand, 2058059 - 2058007
Alignment:
Q  102 ttgtaacccatttgtatcacttttatcttagtggattggagagctgctctctcc 155  Q
    ||||||||| |||||| |||||| ||| || |||||||||||||||||||||||    
T  2058059 ttgtaaccc-tttgtaacactttcatcatattggattggagagctgctctctcc 2058007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 79
Target Start/End: Original strand, 9185084 - 9185153
Alignment:
Q  10 gtgttttctcttaggattcatagtgattgtgagtgacttgaaaaatgggtaaaatttaggtcttgttctt 79  Q
    |||||||||||||||||||||   || |||| ||||  ||||||||||||| || ||||| |||||||||    
T  9185084 gtgttttctcttaggattcattaagagtgtgggtgatatgaaaaatgggtagaaattaggacttgttctt 9185153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 155
Target Start/End: Complemental strand, 18408857 - 18408805
Alignment:
Q  102 ttgtaacccatttgtatcacttttatcttagtggattggagagctgctctctcc 155  Q
    ||||||||| |||||| |||||| ||| || |||||||||||||||||||||||    
T  18408857 ttgtaaccc-tttgtaacactttcatcatactggattggagagctgctctctcc 18408805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 124
Target Start/End: Original strand, 6431985 - 6432059
Alignment:
Q  51 aaaatgggtaaaatttaggtcttgttctttgtgagctctt--aagctaatttattgtaacccatttgtatcacttt 124  Q
    |||||||||| || |||||  ||||||||||||||||  |  |||||||||| |||||||||||||||||| ||||    
T  6431985 aaaatgggtagaaattagga-ttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt 6432059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 124
Target Start/End: Original strand, 22269987 - 22270061
Alignment:
Q  51 aaaatgggtaaaatttaggtcttgttctttgtgagctctt--aagctaatttattgtaacccatttgtatcacttt 124  Q
    |||||||||| || |||||  ||||||||||||||||  |  |||||||||| |||||||||||||||||| ||||    
T  22269987 aaaatgggtagaaattaggg-ttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt 22270061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 120
Target Start/End: Original strand, 25615867 - 25615937
Alignment:
Q  51 aaaatgggtaaaatttaggtcttgttctttgtgagctc--ttaagctaatttattgtaacccatttgtatca 120  Q
    |||||||||| || |||||| ||||||| |||| |||   |||||||||||| |||||||||||||||||||    
T  25615867 aaaatgggtagaaattaggt-ttgttctatgtgcgcttgtttaagctaatttcttgtaacccatttgtatca 25615937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 124
Target Start/End: Complemental strand, 31733123 - 31733049
Alignment:
Q  51 aaaatgggtaaaatttaggtcttgttctttgtgagctc--ttaagctaatttattgtaacccatttgtatcacttt 124  Q
    |||||||||| || |||||  ||||||||||||||||   | |||||||||| |||||||||||||||||| ||||    
T  31733123 aaaatgggtagaaattaggg-ttgttctttgtgagcttggtgaagctaatttcttgtaacccatttgtatctcttt 31733049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 100; Significance: 1e-49; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 7 - 208
Target Start/End: Original strand, 2869599 - 2869802
Alignment:
Q  7 ttagtgttttctcttaggattcatagtgattgtgagtgacttgaaaaatgggtaaaatttaggtctt-gttctttgtgagctcttaagctaatttattgt 105  Q
    |||||||||||||||||||||||| | || |||| ||||||||||||||||||| || |||||| || |||||||||||||| |||||||||||| ||||    
T  2869599 ttagtgttttctcttaggattcattgagagtgtgggtgacttgaaaaatgggtagaaattaggtttttgttctttgtgagcttttaagctaatttcttgt 2869698  T
Q  106 aacccatttgtatcacttttatcttagtggattggagagctgctctct-ccagagagtatgtcatattggaccaaactaggttaccaatcttggtatgtt 204  Q
    ||| | ||||||||||||| ||||||||||||||||||||| |||||| ||  |||||| ||||||||||||| |||| ||| | |||| ||||| ||||    
T  2869699 aactcctttgtatcactttcatcttagtggattggagagctactctctcccctagagtaggtcatattggaccgaactgggtaaacaatattggtgtgtt 2869798  T
Q  205 tgtt 208  Q
    ||||    
T  2869799 tgtt 2869802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 13 - 197
Target Start/End: Original strand, 27149207 - 27149392
Alignment:
Q  13 ttttctcttaggattcatagtgattgtgagtgacttgaaaaatgggtaaaatttaggtcttgttctttgtgagctcttaagctaatttattgtaacccat 112  Q
    |||||||||||||||||| |||| |||| ||||||| |||||  |||| || ||| ||||||||||||||||||| ||||| |||||| |||| |||| |    
T  27149207 ttttctcttaggattcattgtgagtgtgggtgacttaaaaaacaggtagaagttaagtcttgttctttgtgagcttttaaggtaatttcttgttacccct 27149306  T
Q  113 ttgtatcacttttatcttagtggattggagagctgctctct-ccagagagtatgtcatattggaccaaactaggttaccaatcttg 197  Q
    |||||||||||| ||  |||||||||||||||||||||||| ||  | |||| |||||||||||||||||| |||||||| |||||    
T  27149307 ttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattggaccaaacttggttaccagtcttg 27149392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 2 - 209
Target Start/End: Original strand, 15903792 - 15903998
Alignment:
Q  2 tttctttagtgttttctcttaggattcatagtgattgtgagtgacttgaaaaatgggtaaaatttaggtcttgttctttgtgagctcttaagctaattta 101  Q
    ||||||| |||||||||| |||||||||| | || |||| ||||||||||||||||||| || ||||   ||||||||||||||||  |||||| ||||     
T  15903792 tttcttttgtgttttctcataggattcattgagagtgtgggtgacttgaaaaatgggtagaaattagaatttgttctttgtgagcttgtaagct-atttc 15903890  T
Q  102 ttgtaacccatttgtatcacttttatcttagtggattggagagctgctctctcc-agagagtatgtcatattggaccaaactaggttaccaatcttggta 200  Q
    ||||||||| ||||||||||||||||||||||||||||||||  | ||||||||   |||||| ||||||||||| | |||||||||||| ||||||||     
T  15903891 ttgtaacccctttgtatcacttttatcttagtggattggagattttctctctccgtcagagtaggtcatattggatcgaactaggttacc-atcttggtg 15903989  T
Q  201 tgtttgttt 209  Q
    | |||||||    
T  15903990 tatttgttt 15903998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 5 - 182
Target Start/End: Original strand, 2837935 - 2838113
Alignment:
Q  5 ctttagtgttttctcttaggattcatagtgattgtgagtgacttgaaaaatgggtaaaatttaggtcttgttctttgtgagctcttaagctaatttattg 104  Q
    |||||||||||||||||||||||||| | ||  ||| ||||| ||||||||||| |||| ||||||  ||||||||||||||||||   ||||||| |||    
T  2837935 ctttagtgttttctcttaggattcattgagaaggtgggtgacatgaaaaatgggcaaaaattaggttgtgttctttgtgagctcttgtactaatttcttg 2838034  T
Q  105 taacccatttgtatcacttttatcttagtggattggagagctgctctct-ccagagagtatgtcatattggaccaaact 182  Q
    |||| ||||||||||||||| || |||||||||||||||  |||||||| ||  |||||| ||||||||||||| ||||    
T  2838035 taactcatttgtatcactttcattttagtggattggagatgtgctctctcccccagagtaggtcatattggaccgaact 2838113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 5 - 208
Target Start/End: Complemental strand, 31056235 - 31056031
Alignment:
Q  5 ctttagtgttttctcttaggattcatagtgattgtgagtgacttgaaaaatgggtaaaatttaggtcttgttcttt-gtgagctcttaagctaatttatt 103  Q
    |||| ||||||||||||||||||||| | || |||| |||||    |||||||||| || |||||||||||||||| || ||||  ||||||||||||||    
T  31056235 cttttgtgttttctcttaggattcattgagagtgtgggtgacac--aaaatgggtagaaattaggtcttgttcttttgtaagcttataagctaatttatt 31056138  T
Q  104 gtaacccatttgtatcacttttatcttagtggattggagagctgctctct-ccagagagtatgtcatattggaccaaactaggttaccaatc-ttggtat 201  Q
    ||||| | |||||| |||||| |||||||||||||||||||||||||||| ||  ||| || ||||||||| ||| |||||||| | ||||| ||||| |    
T  31056137 gtaactcttttgtaacactttcatcttagtggattggagagctgctctctcccctagattaggtcatattgaaccgaactaggtcaacaatctttggtgt 31056038  T
Q  202 gtttgtt 208  Q
    |||||||    
T  31056037 gtttgtt 31056031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 5 - 151
Target Start/End: Original strand, 28770679 - 28770825
Alignment:
Q  5 ctttagtgttttctcttaggattcatagtgattgtgagtgacttgaaaaatgggtaaaatttaggtcttgttctttgtgagctcttaagctaatttattg 104  Q
    |||||||||||||||||||||||||| | || ||||  |||||||||||||||||| || ||||   |||||||||||||||| |||||||||||| |||    
T  28770679 ctttagtgttttctcttaggattcattgcgagtgtgtatgacttgaaaaatgggtagaaattagagtttgttctttgtgagcttttaagctaatttcttg 28770778  T
Q  105 taacccatttgtatcacttttatcttagtggattggagagctgctct 151  Q
    |||    ||||||||| | ||||| ||| |||| |||||||||||||    
T  28770779 taatatctttgtatcattcttatcgtagaggatcggagagctgctct 28770825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 13 - 155
Target Start/End: Complemental strand, 35397694 - 35397554
Alignment:
Q  13 ttttctcttaggattcatagtgattgtgagtgacttgaaaaatgggtaaaatttaggtcttgttctttgtgagctcttaagctaatttattgtaacccat 112  Q
    |||||||||||||||||| | ||||||| |||||||||||||||| || || |||||| ||||||||| ||| || |||||||||||| | ||||||  |    
T  35397694 ttttctcttaggattcattgagattgtgggtgacttgaaaaatggatagaaattaggt-ttgttctttatgaccttttaagctaattt-tcgtaacctct 35397597  T
Q  113 ttgtatcacttttatcttagtggattggagagctgctctctcc 155  Q
    || ||||||||| |||||||||||||| ||||||||| |||||    
T  35397596 ttatatcactttcatcttagtggattgaagagctgctatctcc 35397554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 5 - 218
Target Start/End: Original strand, 14698914 - 14699126
Alignment:
Q  5 ctttagtgttttctcttaggattcatagtgattgtgagtgacttgaaaaatgggtaaaatttaggtcttgttctt-tgtgagctcttaagctaatttatt 103  Q
    |||| ||||||||||||||||||||| | || |||| |||||    |||||||||| || ||||||||||||||| ||| ||||  ||||||||||| ||    
T  14698914 cttttgtgttttctcttaggattcattgagagtgtgggtgacac--aaaatgggtagaaattaggtcttgttcttgtgtaagcttataagctaatttctt 14699011  T
Q  104 gtaacccatttgtatcacttttatcttagtggattggagagctgctctctccag-agagtatgtcatattggaccaaactaggttaccaatcttggtatg 202  Q
    ||||| | |||||| | |||| ||| ||||||||||||| ||||||||||||   ||| || ||||||||||||| |||| ||| | |||||||||| ||    
T  14699012 gtaactcttttgtaac-ctttcatcatagtggattggagggctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatcttggtgtg 14699110  T
Q  203 tttgtttcattctttc 218  Q
    |||||| | |||||||    
T  14699111 tttgttcctttctttc 14699126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 51 - 218
Target Start/End: Complemental strand, 21630090 - 21629922
Alignment:
Q  51 aaaatgggtaaaatttaggtcttgttctt-tgtgagctcttaagctaatttattgtaacccatttgtatcacttttatcttagtggattggagagctgct 149  Q
    |||||||||| || ||| ||||||||||| ||| ||||  ||| ||||||| ||||||| | |||||| |||||| ||| ||||||||||||||||||||    
T  21630090 aaaatgggtagaaattaagtcttgttcttgtgtaagcttataaactaatttcttgtaactcttttgtaacactttcatcatagtggattggagagctgct 21629991  T
Q  150 ctctccagagagtatgtcatattggaccaaactaggttaccaatcttggtatgtttgtttcattctttc 218  Q
    ||||||  ||| || ||||||||||||  |||| ||| | |||||||||| |||||||| | |||||||    
T  21629990 ctctccccagattaggtcatattggactgaactgggtcaacaatcttggtgtgtttgttcctttctttc 21629922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 7 - 210
Target Start/End: Original strand, 1345448 - 1345654
Alignment:
Q  7 ttagtgttttctcttaggattcatagtgattgtgagtgacttgaaaaatgggtaaaatttaggtcttgttctttgtgagctcttaagctaatttattgta 106  Q
    |||||||||||| ||| ||||||| | || || | ||||| ||||||||||||| || ||||||  |||| ||||||||||| |  |||||||| ||| |    
T  1345448 ttagtgttttcttttatgattcattgagagtgggggtgacatgaaaaatgggtagaaattaggttgtgtt-tttgtgagctcatgtgctaatttcttgca 1345546  T
Q  107 acccatttgtatcacttttatctt-agtggattggagagctgctctct-ccagagagtatgtcatattggaccaaactaggttaccaa--tcttggtatg 202  Q
    || ||||||||||||||| ||||| ||||||| |||||| |||||||| ||  |||||| ||||||||||||| |||| ||| | |||  ||||||| ||    
T  1345547 actcatttgtatcactttcatcttaagtggatcggagaggtgctctctcccccagagtaggtcatattggaccgaactgggtcaacaatttcttggtgtg 1345646  T
Q  203 tttgtttc 210  Q
    ||||||||    
T  1345647 tttgtttc 1345654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 5 - 191
Target Start/End: Complemental strand, 40015117 - 40014930
Alignment:
Q  5 ctttagtgttttctcttaggattcatagtgattgtgagtgacttgaaaaatgggtaaaatttaggtcttgttcttt-gtgagctcttaagctaatttatt 103  Q
    |||| ||| ||| |||||||||| || | || |||| ||||| |||||| || ||| || |||||||||||||||| ||||| | |||||||||||| |     
T  40015117 cttttgtgatttttcttaggatttattgagagtgtgggtgacatgaaaa-tgagtagaaattaggtcttgttcttttgtgagtttttaagctaatttctc 40015019  T
Q  104 gtaacccatttgtatcacttttatcttagtggattggagagctgctctct-ccagagagtatgtcatattggaccaaactaggttacca 191  Q
    | ||| ||||||||||||||| ||||||||||||||||| | || ||||| ||  |||||||||||||||||| | |||| ||||||||    
T  40015018 gcaactcatttgtatcactttcatcttagtggattggagggatgttctctccctcagagtatgtcatattggatctaactgggttacca 40014930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 51 - 208
Target Start/End: Original strand, 34682284 - 34682443
Alignment:
Q  51 aaaatgggtaaaatttaggtcttgttctt-tgtgagctcttaagctaatttattgtaacccatttgtatcacttttatcttagtggattggagagctgct 149  Q
    |||||||||| || ||| ||||||||||| ||| |||   ||||||||||| ||||||| | |||||| |||||| ||  ||||||||||||||||||||    
T  34682284 aaaatgggtagaaattaagtcttgttcttgtgtaagcctgtaagctaatttcttgtaactcttttgtaacactttcattatagtggattggagagctgct 34682383  T
Q  150 ctct-ccagagagtatgtcatattggaccaaactaggttaccaatcttggtatgtttgtt 208  Q
    |||| ||  ||| |||||||||||||||| |||| ||| | |||||||||| ||||||||    
T  34682384 ctctcccccagattatgtcatattggaccgaactgggtcaacaatcttggtgtgtttgtt 34682443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 153
Target Start/End: Original strand, 18674305 - 18674454
Alignment:
Q  5 ctttagtgttttctcttaggattcatag-tgattgtgagtgacttgaaaaatgggtaaaatttaggtcttgttctttgtgagctcttaagctaatttatt 103  Q
    ||||| |||||||||||| |||||||   ||| |||| |||||||||||||||| || || ||| |  |||||||||||||||| |||| ||||||| ||    
T  18674305 ctttaatgttttctcttatgattcatttatgagtgtgggtgacttgaaaaatggatagaaattatggtttgttctttgtgagcttttaaactaatttctt 18674404  T
Q  104 gtaacccatttgtatcacttttatcttagtggattggagagctgctctct 153  Q
    ||||||| || |||||||| || || |||| ||| |||||||||||||||    
T  18674405 gtaaccccttggtatcactcttgtcatagtagatcggagagctgctctct 18674454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 51 - 218
Target Start/End: Complemental strand, 20522367 - 20522198
Alignment:
Q  51 aaaatgggtaaaatttaggtcttgttcttt-gtgagctcttaagctaatttattgtaacccatttgtatcacttttatcttagtggattggagagctgct 149  Q
    |||||||||| || ||| |||||||||||| || ||||  ||| ||||||| ||||||||| |||||| |||||| ||| ||||||||||||| | ||||    
T  20522367 aaaatgggtagaaattaagtcttgttcttttgtaagcttataatctaatttcttgtaacccttttgtaacactttcatcatagtggattggagggttgct 20522268  T
Q  150 ctct-ccagagagtatgtcatattggaccaaactaggttaccaatcttggtatgtttgtttcattctttc 218  Q
    |||| ||  ||| || ||||||||||||| |||| ||| | |||||||||| |||||||| | |||||||    
T  20522267 ctctcccccagattaggtcatattggaccgaactgggtcaacaatcttggtgtgtttgttcctttctttc 20522198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 51 - 208
Target Start/End: Original strand, 10445394 - 10445553
Alignment:
Q  51 aaaatgggtaaaatttaggtcttgttctt-tgtgagctcttaagctaatttattgtaacccatttgtatcacttttatcttagtggattggagagctgct 149  Q
    |||||||||| || ||||||||||||||| ||| || |  ||||||||||| ||||||| | |||||| |||||| ||  ||||||||||||||||||||    
T  10445394 aaaatgggtagaaattaggtcttgttcttgtgtaagattgtaagctaatttcttgtaactcttttgtaacactttcataatagtggattggagagctgct 10445493  T
Q  150 ctct-ccagagagtatgtcatattggaccaaactaggttaccaatcttggtatgtttgtt 208  Q
    |||| ||  ||| || ||||||||||||| |||| | | | |||||||||| ||||||||    
T  10445494 ctctcccccagattaggtcatattggaccgaactggatcaacaatcttggtgtgtttgtt 10445553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 5 - 218
Target Start/End: Complemental strand, 13569521 - 13569306
Alignment:
Q  5 ctttagtgttttctcttaggattcata--gtgattgtgagtgacttgaaaaatgggtaaaatttaggtcttgttctt-tgtgagctcttaagctaattta 101  Q
    |||| ||||||||||||||||||||||  ||||  ||| |||||   || || ||||| || ||||||||||||||| ||| | ||  |||||||||||     
T  13569521 cttttgtgttttctcttaggattcatattgtgagagtgggtgaca--aacaaagggtagaaattaggtcttgttcttgtgtaaacttataagctaatttc 13569424  T
Q  102 ttgtaacccatttgtatcacttttatcttagtggattggagagctgctctct-ccagagagtatgtcatattggaccaaactaggttaccaatcttggta 200  Q
    ||||||| | |||||| |||||| ||| |||||||||||||||||||||||| ||  ||| || ||||||||||||| |||| ||| | |||| |||||     
T  13569423 ttgtaactcttttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaattttggtg 13569324  T
Q  201 tgtttgtttcattctttc 218  Q
    ||||| || | |||||||    
T  13569323 tgtttattcctttctttc 13569306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 51 - 208
Target Start/End: Complemental strand, 39483078 - 39482919
Alignment:
Q  51 aaaatgggtaaaatttaggtcttgttctt-tgtgagctcttaagctaatttattgtaacccatttgtatcacttttatcttagtggattggagagctgct 149  Q
    |||||||||| || ||||||||||||||| ||| ||||  ||||||||||| ||||||| | |||||| || ||| ||| |||||||||||||  |||||    
T  39483078 aaaatgggtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttgtaactcttttgtaacattttcatcatagtggattggaggcctgct 39482979  T
Q  150 ctct-ccagagagtatgtcatattggaccaaactaggttaccaatcttggtatgtttgtt 208  Q
    |||| ||  | | || ||||||||||||| |||||||| | |||||||||| ||||||||    
T  39482978 ctctcccccatattaggtcatattggaccgaactaggtcaacaatcttggtgtgtttgtt 39482919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 10 - 155
Target Start/End: Original strand, 8390059 - 8390205
Alignment:
Q  10 gtgttttctcttaggattcata--gtgattgtgagtgacttgaaaaatgggtaaaatttaggtcttgttctt-tgtgagctcttaagctaatttattgta 106  Q
    ||||||||||||||||||||||  ||||  ||| |||||    |||||||||| || ||||||||||||||| ||  ||||  ||||||||||| |||||    
T  8390059 gtgttttctcttaggattcatattgtgagagtgggtgacac--aaaatgggtagaaattaggtcttgttcttgtgcaagcttgtaagctaatttcttgta 8390156  T
Q  107 acccatttgtatcacttttatcttagtggattggagagctgctctctcc 155  Q
    || | ||| || |||||| ||| ||||||||||||||||||||||||||    
T  8390157 actcttttttaacactttcatcatagtggattggagagctgctctctcc 8390205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 51 - 155
Target Start/End: Complemental strand, 8040209 - 8040102
Alignment:
Q  51 aaaatgggtaaaatttaggtcttgttctt-tgtgagctcttaagctaatttattgtaaccca--tttgtatcacttttatcttagtggattggagagctg 147  Q
    |||||||||| || ||||||||||||||| ||| ||||  ||||||||||| ||||||| |   |||||| |||||| ||| ||||||||||||||||||    
T  8040209 aaaatgggtagaaattaggtcttgttcttgtgtaagcttgtaagctaatttcttgtaactctcttttgtaacactttcatcatagtggattggagagctg 8040110  T
Q  148 ctctctcc 155  Q
    ||||||||    
T  8040109 ctctctcc 8040102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 5 - 155
Target Start/End: Original strand, 10707157 - 10707307
Alignment:
Q  5 ctttagtgttttctcttaggattcata--gtgattgtgagtgacttgaaaaatgggtaaaatttaggtcttgttctt-tgtgagctcttaagctaattta 101  Q
    |||| ||||||||||||||||||||||  ||||  ||| |||||   | | ||||||| || ||||||||||||||| ||| ||||  |||||||||||     
T  10707157 cttttgtgttttctcttaggattcatattgtgagagtgggtgac---acagatgggtagaaattaggtcttgttcttgtgtaagcttgtaagctaatttc 10707253  T
Q  102 ttgtaacccatttgtatcacttttatcttagtggattggagagctgctctctcc 155  Q
    ||||||| | |||||| |||||| ||| ||||||||||||||| || |||||||    
T  10707254 ttgtaactcttttgtaacactttcatcatagtggattggagagttgttctctcc 10707307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 5 - 219
Target Start/End: Complemental strand, 34389043 - 34388835
Alignment:
Q  5 ctttagtgttttctcttaggattcata--gtgattgtgagtgacttgaaaaatgggtaaaatttaggtcttgttctttgtgagctcttaagctaatttat 102  Q
    |||| ||||||||||||||||||||||  ||||  ||| |||||    |||||||||| || ||||||||||||||| |||      ||||||||||| |    
T  34389043 cttttgtgttttctcttaggattcatattgtgagagtgggtgacac--aaaatgggtagaaattaggtcttgttctt-gtg------taagctaatttct 34388953  T
Q  103 tgtaacccatttgtatcacttttatcttagtggattggagagctgctctct-ccagagagtatgtcatattggaccaaactaggttaccaatcttggtat 201  Q
    |||||| | |||||| |||||| ||| ||||||||||||||||| |||||| ||  ||| || ||||||||||||| || | ||| | |||||| ||| |    
T  34388952 tgtaactcttttgtaacactttcatcatagtggattggagagctactctctcccccagattaggtcatattggaccgaattgggtcaacaatctcggtgt 34388853  T
Q  202 gtttgtttcattctttct 219  Q
    ||||||| | ||||||||    
T  34388852 gtttgttcctttctttct 34388835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 51 - 218
Target Start/End: Original strand, 33528576 - 33528740
Alignment:
Q  51 aaaatgggtaaaatttaggtcttgttctttgtgagctcttaagctaatttattgtaacccatttgtatcacttttatcttagtggattggagagctgctc 150  Q
    |||||||||| || |||||||||||||||    ||||  ||||||||||| ||||||| | |||||| |||||| ||| ||||||||||||| | |||||    
T  33528576 aaaatgggtagaaattaggtcttgttctt----agcttataagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggttgctc 33528671  T
Q  151 tc-tccagagagtatgtcatattggaccaaactaggttaccaatcttggtatgtttgtttcattctttc 218  Q
    || | |  | | || ||||||||||||| |||| ||| | |||||||||| |||||||| | |||||||    
T  33528672 tctttcccatattaggtcatattggaccgaactgggtcaacaatcttggtgtgtttgttcctttctttc 33528740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 27139998 - 27139844
Alignment:
Q  1 ctttctttagtgttttctcttaggattcatagtgattgtgagtgacttgaaaaatgggtaaaatttaggtcttgttctttgtgagctcttaagctaattt 100  Q
    ||||||||| |||||||| |||||||||||  ||  |   |||||||||||| ||| ||| || |||||  |||| ||||||||||| | ||  ||||||    
T  27139998 ctttctttattgttttctattaggattcattttgggttcaagtgacttgaaatatgtgtagaaattagggtttgtactttgtgagctttaaatttaattt 27139899  T
Q  101 attgtaacccatttgtatcacttttatcttagtggattggagagctgctctctcc 155  Q
      ||||||   ||||||||||| || || ||||| ||||||||||||||||||||    
T  27139898 cctgtaacatttttgtatcactattttcatagtgaattggagagctgctctctcc 27139844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 52 - 155
Target Start/End: Complemental strand, 3491896 - 3491792
Alignment:
Q  52 aaatgggtaaaatttaggtcttgttctt-tgtgagctcttaagctaattta-ttgtaacccatttgtatcacttttatcttagtggattggagagctgct 149  Q
    ||||||||| ||| |||||||||||||| ||| ||||   |||||| |||  ||||||||| |||||| |||||| ||| ||||||||||||||||||||    
T  3491896 aaatgggtagaatctaggtcttgttcttgtgtaagcttgcaagctatttttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgct 3491798  T
Q  150 ctctcc 155  Q
    ||||||    
T  3491797 ctctcc 3491792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 218
Target Start/End: Original strand, 16940199 - 16940328
Alignment:
Q  90 taagctaatttattgtaacccatttgtatcacttttatcttagtggattggagagctgctctct-ccagagagtatgtcatattggaccaaactaggtta 188  Q
    ||||||||||| ||||||  | |||||| |||||| ||| ||||||||||||| |||| ||| | ||  ||| |||||||||||||||| || | ||| |    
T  16940199 taagctaatttcttgtaattcttttgtaacactttcatcatagtggattggagggctgatctttcccccagattatgtcatattggaccgaattgggtca 16940298  T
Q  189 ccaatcttggtatgtttgtttcattctttc 218  Q
     |||||||||| |||||||| | |||||||    
T  16940299 acaatcttggtgtgtttgttcctttctttc 16940328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 218
Target Start/End: Original strand, 17010864 - 17010993
Alignment:
Q  90 taagctaatttattgtaacccatttgtatcacttttatcttagtggattggagagctgctctct-ccagagagtatgtcatattggaccaaactaggtta 188  Q
    ||||||||||| ||||||  | |||||| |||||| ||| ||||||||||||| |||| ||| | ||  ||| |||||||||||||||| || | ||| |    
T  17010864 taagctaatttcttgtaattcttttgtaacactttcatcatagtggattggagggctgatctttcccccagattatgtcatattggaccgaattgggtca 17010963  T
Q  189 ccaatcttggtatgtttgtttcattctttc 218  Q
     |||||||||| |||||||| | |||||||    
T  17010964 acaatcttggtgtgtttgttcctttctttc 17010993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 51 - 155
Target Start/End: Complemental strand, 17865350 - 17865245
Alignment:
Q  51 aaaatgggtaaaatttaggtcttgttctt-tgtgagctcttaagctaatttattgtaacccatttgtatcacttttatcttagtggattggagagctgct 149  Q
    ||||| |||| || ||| ||||||||||| ||| ||||  ||||||||||| ||||||| | |||||| |||||| ||| ||||||||||||| | ||||    
T  17865350 aaaataggtagaaattatgtcttgttcttgtgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggttgct 17865251  T
Q  150 ctctcc 155  Q
    ||||||    
T  17865250 ctctcc 17865245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 51 - 155
Target Start/End: Complemental strand, 33118283 - 33118178
Alignment:
Q  51 aaaatgggtaaaatttaggtcttgttctt-tgtgagctcttaagctaatttattgtaacccatttgtatcacttttatcttagtggattggagagctgct 149  Q
    |||||||||| || ||| ||||||||||| ||| ||||  ||||||||||| |||||||   |||||| | |||| ||| ||||||||||||| ||||||    
T  33118283 aaaatgggtagaaattaagtcttgttcttgtgtaagcttataagctaatttcttgtaactattttgtaactctttcatcatagtggattggagggctgct 33118184  T
Q  150 ctctcc 155  Q
    ||||||    
T  33118183 ctctcc 33118178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 51 - 124
Target Start/End: Complemental strand, 11151745 - 11151671
Alignment:
Q  51 aaaatgggtaaaatttaggtcttgttctttgtgagctc--ttaagctaatttattgtaacccatttgtatcacttt 124  Q
    |||||||||| || |||| | ||||||||||||||||   |||||||||||| |||||||||||||||||||||||    
T  11151745 aaaatgggtagaaattagat-ttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatcacttt 11151671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 51 - 124
Target Start/End: Original strand, 11690515 - 11690589
Alignment:
Q  51 aaaatgggtaaaatttaggtcttgttctttgtgagctc--ttaagctaatttattgtaacccatttgtatcacttt 124  Q
    |||||||||| || |||||| ||||||||||||||||   |||||||||||| |||||||||||||||||| ||||    
T  11690515 aaaatgggtagaaattaggt-ttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatcccttt 11690589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 52 - 155
Target Start/End: Original strand, 28259129 - 28259232
Alignment:
Q  52 aaatgggtaaaatttaggtcttgttctt-tgtgagctcttaagctaatttattgtaacccatttgtatcacttttatcttagtggattggagagctgctc 150  Q
    ||||||||| || |||| |||||||||| ||| ||||   |||||| ||| ||||||| | |||||| |||||| ||| |||||||||||||||||||||    
T  28259129 aaatgggtagaaattagatcttgttcttgtgtaagcttgcaagctattttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgctc 28259227  T
Q  151 tctcc 155  Q
    |||||    
T  28259228 tctcc 28259232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 51 - 124
Target Start/End: Original strand, 42362366 - 42362440
Alignment:
Q  51 aaaatgggtaaaatttaggtcttgttctttgtgagctc--ttaagctaatttattgtaacccatttgtatcacttt 124  Q
    |||||||||| || |||||| ||||||||||||||||   |||||||||||| |||||||||||||||||| ||||    
T  42362366 aaaatgggtagaaattaggt-ttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatcccttt 42362440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 103
Target Start/End: Original strand, 41586453 - 41586552
Alignment:
Q  2 tttctttagtgttttctcttaggattcatagtgattgtgagtgacttgaaaaatgggta-aaatttaggtcttgttctttgtgagctcttaagctaattt 100  Q
    |||||||| |||||||||||||||| |||  |||  |||||||||||||||||| |||| ||||| | || |||||||||||| ||| |||| |||||||    
T  41586453 tttctttaatgttttctcttaggatccattctga--gtgagtgacttgaaaaataggtagaaattaaagt-ttgttctttgtgtgcttttaaactaattt 41586549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 49 - 124
Target Start/End: Complemental strand, 723900 - 723824
Alignment:
Q  49 gaaaaatgggtaaaatttaggtcttgttctttgtgagctc--ttaagctaatttattgtaacccatttgtatcacttt 124  Q
    ||||| |||||| || |||||| ||||||||||||||||   |||||||||||| |||||||||||||||||| ||||    
T  723900 gaaaactgggtagaaattaggt-ttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatcccttt 723824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 125
Target Start/End: Complemental strand, 14633980 - 14633905
Alignment:
Q  51 aaaatgggtaaaatttaggtcttgttctttgtgagctc--ttaagctaatttattgtaacccatttgtatcactttt 125  Q
    |||||||||| || |||||  ||||||||||||||||   |||||||||||| |||||||||||||||||| |||||    
T  14633980 aaaatgggtagaaattagga-ttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatccctttt 14633905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 102 - 155
Target Start/End: Complemental strand, 25398589 - 25398537
Alignment:
Q  102 ttgtaacccatttgtatcacttttatcttagtggattggagagctgctctctcc 155  Q
    ||||||||| |||||| |||||| ||| ||||||||||||||||||||||||||    
T  25398589 ttgtaaccc-tttgtaacactttcatcatagtggattggagagctgctctctcc 25398537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 102 - 155
Target Start/End: Complemental strand, 25403727 - 25403675
Alignment:
Q  102 ttgtaacccatttgtatcacttttatcttagtggattggagagctgctctctcc 155  Q
    ||||||||| |||||| |||||| ||| ||||||||||||||||||||||||||    
T  25403727 ttgtaaccc-tttgtaacactttcatcatagtggattggagagctgctctctcc 25403675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 102 - 155
Target Start/End: Complemental strand, 25407716 - 25407664
Alignment:
Q  102 ttgtaacccatttgtatcacttttatcttagtggattggagagctgctctctcc 155  Q
    ||||||||| |||||| |||||| ||| ||||||||||||||||||||||||||    
T  25407716 ttgtaaccc-tttgtaacactttcatcatagtggattggagagctgctctctcc 25407664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 155
Target Start/End: Original strand, 16388449 - 16388525
Alignment:
Q  79 ttgtgagctcttaagctaatttattgtaacccatttgtatcacttttatcttagtggattggagagctgctctctcc 155  Q
    ||||||||| |||||||||||| ||||||||  ||| |||| || |||||  ||||||  |||||||||||||||||    
T  16388449 ttgtgagcttttaagctaatttcttgtaacctctttctatctctcttatcaaagtggaaaggagagctgctctctcc 16388525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 184
Target Start/End: Original strand, 42039619 - 42039754
Alignment:
Q  51 aaaatgggtaaaatttaggtcttgttctt-tgtgagctcttaagctaattta-ttgtaacccatttgtatcacttttatcttagtggattggagagctgc 148  Q
    |||||||||| || |||||||||||| || ||| ||||   ||||||||||  ||||||| | || ||| |||||| ||| ||||||||| |||||||||    
T  42039619 aaaatgggtagaaattaggtcttgtttttgtgtaagcttgcaagctaattttcttgtaactc-ttcgtaacactttcatcatagtggattagagagctgc 42039717  T
Q  149 tctct-ccagagagtatgtcatattggaccaaactag 184  Q
    ||||| ||| ||| || ||||||||||||| ||||||    
T  42039718 tctctcccacagattaggtcatattggaccgaactag 42039754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 3278192 - 3278141
Alignment:
Q  5 ctttagtgttttctcttaggattcatagtgattgtgagtgacttgaaaaatg 56  Q
    |||||| ||||||||||||| ||||| |||| ||||||||| ||||||||||    
T  3278192 ctttagcgttttctcttagggttcattgtgagtgtgagtgaattgaaaaatg 3278141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 124
Target Start/End: Complemental strand, 36318165 - 36318089
Alignment:
Q  49 gaaaaatgggtaaaatttaggtcttgttctttgtgagctctt--aagctaatttattgtaacccatttgtatcacttt 124  Q
    |||||||||||| || |||||  ||||||||||||||||  |  || |||||||||||||||||||||||||| ||||    
T  36318165 gaaaaatgggtagaaattaggg-ttgttctttgtgagcttgttgaaactaatttattgtaacccatttgtatctcttt 36318089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 155
Target Start/End: Original strand, 9296404 - 9296456
Alignment:
Q  102 ttgtaacccatttgtatcacttttatcttagtggattggagagctgctctctcc 155  Q
    ||||||||| |||||| |||||| ||| || |||||||||||||||||||||||    
T  9296404 ttgtaaccc-tttgtaacactttcatcatattggattggagagctgctctctcc 9296456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 155
Target Start/End: Original strand, 11098930 - 11098982
Alignment:
Q  102 ttgtaacccatttgtatcacttttatcttagtggattggagagctgctctctcc 155  Q
    ||||||||| |||||| |||||| ||| || |||||||||||||||||||||||    
T  11098930 ttgtaaccc-tttgtaacactttcatcatattggattggagagctgctctctcc 11098982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 155
Target Start/End: Complemental strand, 14291582 - 14291530
Alignment:
Q  102 ttgtaacccatttgtatcacttttatcttagtggattggagagctgctctctcc 155  Q
    ||||||||| |||||| |||||| ||| || |||||||||||||||||||||||    
T  14291582 ttgtaaccc-tttgtaacactttcatcatattggattggagagctgctctctcc 14291530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 117
Target Start/End: Original strand, 24885675 - 24885742
Alignment:
Q  51 aaaatgggtaaaatttaggtcttgttctttgtgagctc--ttaagctaatttattgtaacccatttgta 117  Q
    |||||| ||| || |||||| ||||||||||||||||   |||||||||||| ||||||||||||||||    
T  24885675 aaaatgagtagaaattaggt-ttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgta 24885742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 125
Target Start/End: Complemental strand, 34139925 - 34139850
Alignment:
Q  51 aaaatgggtaaaatttaggtcttgttctttgtgagctc--ttaagctaatttattgtaacccatttgtatcactttt 125  Q
    |||||||||| || |||||  ||||||||||||||||   |||||||||||| ||||||||||| |||||| |||||    
T  34139925 aaaatgggtagaaattaggg-ttgttctttgtgagcttgtttaagctaatttcttgtaacccatatgtatccctttt 34139850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 113 - 174
Target Start/End: Complemental strand, 40738926 - 40738865
Alignment:
Q  113 ttgtatcacttttatcttagtggattggagagctgctctctccagagagtatgtcatattgg 174  Q
    ||||| |||||| ||| ||||||||||||||||||||||| ||  ||| || ||||||||||    
T  40738926 ttgtaacactttcatcatagtggattggagagctgctctccccccagattaggtcatattgg 40738865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 72 - 118
Target Start/End: Complemental strand, 42288244 - 42288196
Alignment:
Q  72 ttgttctttgtgagctctt--aagctaatttattgtaacccatttgtat 118  Q
    ||||||||||||||||  |  ||||||||||||||||||||||||||||    
T  42288244 ttgttctttgtgagcttgttgaagctaatttattgtaacccatttgtat 42288196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 92; Significance: 8e-45; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 5990462 - 5990702
Alignment:
Q  1 ctttctttagtgttttctcttaggattcatagtgattgtgagtgacttgaaaaatgggtaaaatttaggtcttgttctttgtgagctcttaagctaattt 100  Q
    |||||||||||||||||||||||||||||| |  | |||| |||||||||||||||||| ||| | ||||| ||||||||||||||| ||||||||||||    
T  5990462 ctttctttagtgttttctcttaggattcattgaaagtgtgggtgacttgaaaaatgggtgaaaatgaggtcgtgttctttgtgagcttttaagctaattt 5990561  T
Q  101 attgtaacccatttgtatcacttttatcttagtggattggagagctgctctctccag-agagtatgtcatattggaccaaactaggttaccaatcttggt 199  Q
     |||||||   ||||||||||||| ||||||||  |||||||||| |||||||||   | | |||||||||||||||||||||  ||||||||||||| |    
T  5990562 cttgtaacatctttgtatcactttcatcttagta-attggagagccgctctctcccccacaatatgtcatattggaccaaact-tgttaccaatcttgtt 5990659  T
Q  200 atgtttg--tttcattctttctggcttatatttgttgcctttg 240  Q
     || |||  |||||||||| || |||||| |||||||| ||||    
T  5990660 gtgcttgtttttcattcttgcttgcttatctttgttgcttttg 5990702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 11 - 176
Target Start/End: Original strand, 9054748 - 9054914
Alignment:
Q  11 tgttttctcttaggattcatagtgattgtgagtgacttgaaaaatgggtaaaatttaggtcttgttctttgtgagctcttaagctaatttattgtaaccc 110  Q
    |||||||||||||||||||| | || |||||||||||||||||||||||| || |||| | |||||||||||| ||| |||||||||||| ||||||||     
T  9054748 tgttttctcttaggattcattgagagtgtgagtgacttgaaaaatgggtagaaattagattttgttctttgtgcgcttttaagctaatttcttgtaacca 9054847  T
Q  111 atttgtatcacttttatcttagtggattggagagctgctctctcc-agagagtatgtcatattggac 176  Q
     ||||||||||||| ||||||||||||| ||||||||||||||||   |||||| ||||||||||||    
T  9054848 ctttgtatcactttcatcttagtggattagagagctgctctctcctccagagtaggtcatattggac 9054914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 28307758 - 28307522
Alignment:
Q  1 ctttctttagtgttttctcttaggattcatagtgattgtgagtgacttgaaaaatgggtaaaatttaggtcttgttctttgtgagctcttaag-ctaatt 99  Q
    |||||||| ||||||||| ||||||||||  | || |||| ||||||||| ||||| ||| ||  ||||||||||||||| |||||| ||||  ||||||    
T  28307758 ctttcttttgtgttttcttttaggattcagtgagagtgtgggtgacttgagaaatgtgtagaaagtaggtcttgttctttatgagcttttaaaactaatt 28307659  T
Q  100 tattgtaacccatttgtatcacttttatcttagtggattggagagctgctctc-tccagagagtatgtcatattggaccaaactaggttaccaatcttgg 198  Q
    | ||||||||||| ||||| ||||  ||||||||||||||||||||||||||| |||  |||||| ||||| ||||||| |||| |||||||||||||||    
T  28307658 tcttgtaacccatgtgtattacttccatcttagtggattggagagctgctctcatccccagagtaggtcattttggaccgaactgggttaccaatcttgg 28307559  T
Q  199 tatgtttgtttcattctttctggcttatatttgttgc 235  Q
      ||||| |||||||||| ||  ||||||||| ||||    
T  28307558 cgtgtttatttcattcttgctttcttatatttattgc 28307522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 5 - 155
Target Start/End: Complemental strand, 3051312 - 3051162
Alignment:
Q  5 ctttagtgttttctcttaggattcatagtgattgtgagtgacttgaaaaatgggtaaaatttaggtcttgttctttgtgagctcttaagctaatttattg 104  Q
    |||| ||| ||||||||||||||||| | || ||| |||||| ||||||||||||| || ||| || |||||||||||||||||||| |||||||| |||    
T  3051312 cttttgtgctttctcttaggattcattgagagtgtaagtgacatgaaaaatgggtagaaattaagttttgttctttgtgagctcttatgctaatttcttg 3051213  T
Q  105 taacccatttgtatcacttttatcttagtggattggagagctgctctctcc 155  Q
    |||| ||||||||||||||| ||||||||||||||||||| ||||||||||    
T  3051212 taactcatttgtatcactttcatcttagtggattggagaggtgctctctcc 3051162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 37 - 218
Target Start/End: Complemental strand, 6813844 - 6813660
Alignment:
Q  37 tgtgagtgacttgaaaaatgggta-aaatttaggtcttgttctttgtgagctcttaagctaatttattgtaacccatttgtatcacttttatcttagtgg 135  Q
    |||||||||||||||||||||||| ||| |||||| ||||||||||||||||   |||||||||| ||||||||| ||||| ||||||| |||||| |||    
T  6813844 tgtgagtgacttgaaaaatgggtagaaaattaggttttgttctttgtgagcttgcaagctaatttcttgtaacccctttgtgtcactttcatcttattgg 6813745  T
Q  136 attggagagctgctctct-ccagagagtatgtcatattggaccaaactaggttaccaatc-ttggtatgtttgtttcattctttc 218  Q
    |||||||||||||||||| ||  || ||| || |||||||||| |||| ||||| ||||| |||||||||||||| | |||||||    
T  6813744 attggagagctgctctctcccctagtgtaggttatattggaccgaactgggttaacaatctttggtatgtttgttcctttctttc 6813660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 10 - 208
Target Start/End: Original strand, 19752303 - 19752503
Alignment:
Q  10 gtgttttctcttaggattcatagtgattgtgagtgacttgaaaaatgggtaaaatttaggtcttgttctt-tgtgagctcttaagctaattta-ttgtaa 107  Q
    ||||||||||||||||||||| | || |||| ||||  ||||||||||||| || ||||| ||||||||| ||| ||||   |||||| |||  ||||||    
T  19752303 gtgttttctcttaggattcattgagagtgtgggtgatatgaaaaatgggtagaaattaggacttgttcttgtgtaagcttgcaagctatttttcttgtaa 19752402  T
Q  108 cccatttgtatcacttttatcttagtggattggagagctgctctct-ccagagagtatgtcatattggaccaaactaggttaccaatcttggtatgtttg 206  Q
    | |||| ||| |||||| |||||||||||||||||||||||||||| ||  ||| || ||||||||||||| |||||||| | |||||||||| ||||||    
T  19752403 ctcatt-gtaacactttcatcttagtggattggagagctgctctctcccctagactaggtcatattggaccgaactaggtcaacaatcttggtgtgtttg 19752501  T
Q  207 tt 208  Q
    ||    
T  19752502 tt 19752503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 51 - 218
Target Start/End: Original strand, 23799527 - 23799696
Alignment:
Q  51 aaaatgggtaaaatttaggtcttgttctt-tgtgagctcttaagctaatttattgtaacccatttgtatcacttttatcttagtggattggagagctgct 149  Q
    |||||||||| || ||||||||||||||| ||| ||||  ||||||||||| ||||||| | |||||| |||||| ||| ||||||||||||| ||||||    
T  23799527 aaaatgggtagaaattaggtcttgttcttgtgtaagcttgtaagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgct 23799626  T
Q  150 ctctcc-agagagtatgtcatattggaccaaactaggttaccaatcttggtatgtttgtttcattctttc 218  Q
    ||||||   | | || ||||||||||||| |||| ||| | |||||||||| |||||||| | |||||||    
T  23799627 ctctcctccaaattaggtcatattggaccgaactgggtcaacaatcttggtgtgtttgttcctttctttc 23799696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 208
Target Start/End: Original strand, 26403134 - 26403339
Alignment:
Q  5 ctttagtgttttctcttaggattcata--gtgattgtgagtgacttgaaaaatgggtaaaatttaggtcttgttctt-tgtgagctcttaagctaattta 101  Q
    |||| ||||||||||||| ||||||||  ||||  |||||||||    |||||||||| || ||||||||||||||| ||  ||||  |||||||||||     
T  26403134 cttttgtgttttctcttatgattcatattgtgagagtgagtgacac--aaaatgggtagaaattaggtcttgttcttgtgcaagcttgtaagctaatttc 26403231  T
Q  102 ttgtaacccatttgtatcacttttatcttagtggattggagagctgctctct-ccagagagtatgtcatattggaccaaactaggttaccaatcttggta 200  Q
     | |||| | |||||| |||||| ||| |||||||||||||||||||||||| ||  ||| || ||||||||||||| |||| ||| | ||||||||||     
T  26403232 ctataactcttttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatcttggtg 26403331  T
Q  201 tgtttgtt 208  Q
    ||||||||    
T  26403332 tgtttgtt 26403339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 51 - 153
Target Start/End: Complemental strand, 6127368 - 6127265
Alignment:
Q  51 aaaatgggtaaaatttaggtcttgttcttt-gtgagctcttaagctaatttattgtaacccatttgtatcacttttatcttagtggattggagagctgct 149  Q
    |||||||||| || |||||||||||||||| || ||||  ||||||||||| ||||||| | |||||| |||||| ||| ||||||||||||||||||||    
T  6127368 aaaatgggtagaaattaggtcttgttcttttgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagagctgct 6127269  T
Q  150 ctct 153  Q
    ||||    
T  6127268 ctct 6127265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 139
Target Start/End: Original strand, 7493078 - 7493212
Alignment:
Q  5 ctttagtgttttctcttaggattcatagtgattgtgagtgacttgaaaaatgggtaaaatttaggtcttgttctttgtgagctcttaagctaatttattg 104  Q
    |||||||||||| |||||||||| || | || |||| |||||||||||||  |||| || |||||| ||||||| |||||||| ||| | |||||| ||     
T  7493078 ctttagtgttttttcttaggatttattgagagtgtgggtgacttgaaaaacaggtagaaattaggttttgttctgtgtgagcttttatgttaatttctta 7493177  T
Q  105 taacccatttgtatcacttttatcttagtggattg 139  Q
    ||||   ||||||||||||| ||||||||||||||    
T  7493178 taacttctttgtatcactttcatcttagtggattg 7493212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 14601359 - 14601216
Alignment:
Q  1 ctttctttagtgttttctcttaggattcatagtgattgtgagtgacttgaaaaatgggtaaaatttaggtcttgttctttgtgagctcttaagctaattt 100  Q
    ||||||||| ||||||||| |||||||||| |||  | ||||||||||||||||| ||||||| |||||    |||||||||| |||  || ||||||||    
T  14601359 ctttctttattgttttctcataggattcatcgtgcgtttgagtgacttgaaaaataggtaaaaattaggatacgttctttgtgggcttatacgctaattt 14601260  T
Q  101 attgtaacccatttgtatcacttttatcttagtggattggagag 144  Q
      |||||||  ||||||||| | ||||  ||||||||| |||||    
T  14601259 cgtgtaacctctttgtatcattattattgtagtggattagagag 14601216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 51 - 208
Target Start/End: Original strand, 5702433 - 5702592
Alignment:
Q  51 aaaatgggtaaaatttaggtcttgttctt-tgtgagctcttaagctaatttattgtaacccatttgtatcacttttatcttagtggattggagagctgct 149  Q
    |||||||||| || |||||| ||| |||| ||| ||||  ||||||||||| ||||||| | |||||| |||||| ||| ||| ||||||||| | ||||    
T  5702433 aaaatgggtagaaattaggttttgctcttgtgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcataggggattggagggatgct 5702532  T
Q  150 ctct-ccagagagtatgtcatattggaccaaactaggttaccaatcttggtatgtttgtt 208  Q
    |||| ||  | | || ||||||||||||| |||| ||| | |||||||||| ||||||||    
T  5702533 ctctcccccatattaggtcatattggaccgaactgggtcaacaatcttggtgtgtttgtt 5702592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 39 - 155
Target Start/End: Original strand, 33503780 - 33503897
Alignment:
Q  39 tgagtgacttgaaaaatgggtaaaatttaggtcttgttctttgtgagctcttaagctaatttattgtaacc-catttgtatcacttttatcttagtggat 137  Q
    |||||||||||||||||||||| || |||||| |||| ||||| | |||  | ||||||||| || ||||| | || ||||||||  | || ||||||||    
T  33503780 tgagtgacttgaaaaatgggtagaaattaggtattgtgctttgagggcttgtgagctaatttcttttaacctctttggtatcactcatttcatagtggat 33503879  T
Q  138 tggagagctgctctctcc 155  Q
    || |||||||||||||||    
T  33503880 tgaagagctgctctctcc 33503897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 52 - 155
Target Start/End: Complemental strand, 7412486 - 7412383
Alignment:
Q  52 aaatgggtaaaatttaggtcttgttctt-tgtgagctcttaagctaatttattgtaacccatttgtatcacttttatcttagtggattggagagctgctc 150  Q
    ||||||||| || ||||||||||||||| ||| ||||   ||| || ||| ||||||| | |||||| |||||| ||| |||||||||||||||||||||    
T  7412486 aaatgggtagaaattaggtcttgttcttgtgtaagcttgcaagttattttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgctc 7412388  T
Q  151 tctcc 155  Q
    |||||    
T  7412387 tctcc 7412383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 39 - 155
Target Start/End: Complemental strand, 11772098 - 11771983
Alignment:
Q  39 tgagtgacttgaaaaatgggtaaaatttaggtcttgttctttgtgagctcttaagctaatttattgtaacccatttgtatcacttttatcttagtggatt 138  Q
    |||||||||||||||| |||||| ||| |||   |||||||||||| ||  ||| ||||||| || |||||  ||||||||||| ||||| |||||||||    
T  11772098 tgagtgacttgaaaaaagggtaatatt-aggatatgttctttgtgaacttgtaaactaatttcttttaacctctttgtatcactcttatcatagtggatt 11772000  T
Q  139 ggagagctgctctctcc 155  Q
    ||| || || |||||||    
T  11771999 ggaaagttgatctctcc 11771983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 51 - 124
Target Start/End: Original strand, 30291620 - 30291695
Alignment:
Q  51 aaaatgggtaaaatttaggtcttgttctttgtgagctctt--aagctaatttattgtaacccatttgtatcacttt 124  Q
    |||||||||| || |||||| ||||||||||||||||  |  |||||||||| ||||||| |||||||||||||||    
T  30291620 aaaatgggtagaaattaggttttgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatcacttt 30291695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 122
Target Start/End: Original strand, 8863563 - 8863646
Alignment:
Q  37 tgtgagtgacttgaaaaatgggta-aaatttaggtcttgttctttgtgagctcttaagctaatttattgtaacccatttgtatcact 122  Q
    |||||||||||||||||||||||| ||||| |||| ||||||  |||||||| ||||| |||||| ||||||||  |||||||||||    
T  8863563 tgtgagtgacttgaaaaatgggtagaaattaaggt-ttgttc--tgtgagcttttaagttaatttcttgtaacctctttgtatcact 8863646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 196
Target Start/End: Original strand, 31071232 - 31071326
Alignment:
Q  102 ttgtaacccatttgtatcacttttatcttagtggattggagagctgctctct-ccagagagtatgtcatattggaccaaactaggttaccaatctt 196  Q
    ||||||||| |||||| |||||| ||| |||||||||||||||||||||||| ||  ||| || ||||||||||||| |||| ||| | |||||||    
T  31071232 ttgtaaccc-tttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactcggtcaacaatctt 31071326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 122
Target Start/End: Original strand, 34477128 - 34477241
Alignment:
Q  6 tttagtgttttctcttaggattcatagtgattgtgagtgacttgaaaaatgggtaaaatttaggtcttgttctttgtgagctcttaagctaatttattgt 105  Q
    |||| ||||||||||| |||||||| |||  | |||||||||||||||||||||  || ||||   |||||||||||||| |  |||| |||||| || |    
T  34477128 tttattgttttctctttggattcattgtggatttgagtgacttgaaaaatgggtcgaaattag---ttgttctttgtgagtttgtaagttaatttctttt 34477224  T
Q  106 aacccatttgtatcact 122  Q
    ||||  |||||||||||    
T  34477225 aacctctttgtatcact 34477241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 102 - 155
Target Start/End: Original strand, 1261957 - 1262009
Alignment:
Q  102 ttgtaacccatttgtatcacttttatcttagtggattggagagctgctctctcc 155  Q
    ||||||||| |||||| |||||| ||| ||||||||||||||||||||||||||    
T  1261957 ttgtaaccc-tttgtaacactttcatcatagtggattggagagctgctctctcc 1262009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 124
Target Start/End: Original strand, 18141835 - 18141908
Alignment:
Q  51 aaaatgggtaaaatttaggtcttgttctttgtgagctctt--aagctaatttattgtaacccatttgtatcacttt 124  Q
    |||||||||| || ||||||  |||||||||||||||  |  |||||||||| |||||||||||||||||||||||    
T  18141835 aaaatgggtagaaattaggt--tgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatcacttt 18141908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 112 - 196
Target Start/End: Original strand, 19175766 - 19175851
Alignment:
Q  112 tttgtatcacttttatcttagtggattggagagctgctctct-ccagagagtatgtcatattggaccaaactaggttaccaatctt 196  Q
    |||||| |||||| ||| ||||||||||||||| |||||||| ||  ||| || ||||||||||||| |||||||| | |||||||    
T  19175766 tttgtaacactttcatcatagtggattggagagttgctctctcccccagattaggtcatattggaccgaactaggtcaacaatctt 19175851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 155
Target Start/End: Complemental strand, 4456173 - 4456070
Alignment:
Q  52 aaatgggtaaaatttaggtcttgttctt-tgtgagctcttaagctaatttattgtaacccatttgtatcacttttatcttagtggattggagagctgctc 150  Q
    ||||||||| || ||| ||||||||||| ||| ||||    ||||| ||| ||||||| | |||||| |||||| ||| |||||||||||||||||||||    
T  4456173 aaatgggtagaaattatgtcttgttcttgtgtaagcttgccagctattttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgctc 4456075  T
Q  151 tctcc 155  Q
    |||||    
T  4456074 tctcc 4456070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 31513236 - 31513314
Alignment:
Q  4 tctttagtgttttctcttaggattcatagtgattgtgagtgacttgaaaaatgggtaaaatttaggtcttgttctttgtga 84  Q
    ||||||||||||||||||||||||||| |||| ||||  ||||| | ||||| |||| || |||||| |||||||||||||    
T  31513236 tctttagtgttttctcttaggattcattgtgagtgtggatgactcg-aaaataggtagaaattaggt-ttgttctttgtga 31513314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 218
Target Start/End: Original strand, 9765849 - 9765939
Alignment:
Q  130 tagtggattggagagctgctctct-ccagagagtatgtcatattggaccaaactaggttaccaatc-ttggtatgtttgtttcattctttc 218  Q
    |||||||||||||||||||||||| ||  ||| || ||||||||||||| |||| ||| | ||||| ||||| |||||||| | |||||||    
T  9765849 tagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatcattggtgtgtttgttcccttctttc 9765939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 155
Target Start/End: Complemental strand, 26287985 - 26287943
Alignment:
Q  113 ttgtatcacttttatcttagtggattggagagctgctctctcc 155  Q
    ||||| |||||| ||| ||||||||||||||||||||||||||    
T  26287985 ttgtaacactttcatcatagtggattggagagctgctctctcc 26287943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 155
Target Start/End: Complemental strand, 26301242 - 26301200
Alignment:
Q  113 ttgtatcacttttatcttagtggattggagagctgctctctcc 155  Q
    ||||| |||||| ||| ||||||||||||||||||||||||||    
T  26301242 ttgtaacactttcatcatagtggattggagagctgctctctcc 26301200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 155
Target Start/End: Complemental strand, 26313236 - 26313194
Alignment:
Q  113 ttgtatcacttttatcttagtggattggagagctgctctctcc 155  Q
    ||||| |||||| ||| ||||||||||||||||||||||||||    
T  26313236 ttgtaacactttcatcatagtggattggagagctgctctctcc 26313194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 124
Target Start/End: Complemental strand, 42435147 - 42435071
Alignment:
Q  49 gaaaaatgggtaaaatttaggtcttgttctttgtgagctctt--aagctaatttattgtaacccatttgtatcacttt 124  Q
    |||||||||||| || |||||  ||||||||||||||||  |  |||||||||| |||||||||||||||||| ||||    
T  42435147 gaaaaatgggtagaaattaggg-ttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt 42435071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 155
Target Start/End: Original strand, 4760078 - 4760130
Alignment:
Q  102 ttgtaacccatttgtatcacttttatcttagtggattggagagctgctctctcc 155  Q
    ||||||||| |||||| |||||| ||| || |||||||||||||||||||||||    
T  4760078 ttgtaaccc-tttgtaacactttcatcatattggattggagagctgctctctcc 4760130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 155
Target Start/End: Original strand, 18853170 - 18853223
Alignment:
Q  102 ttgtaacccatttgtatcacttttatcttagtggattggagagctgctctctcc 155  Q
    ||||||||| |||||| |||||| ||  || |||||||||||||||||||||||    
T  18853170 ttgtaacccttttgtaacactttcattatattggattggagagctgctctctcc 18853223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 155
Target Start/End: Original strand, 18870564 - 18870617
Alignment:
Q  102 ttgtaacccatttgtatcacttttatcttagtggattggagagctgctctctcc 155  Q
    ||||||||| |||||| |||||| ||  || |||||||||||||||||||||||    
T  18870564 ttgtaacccttttgtaacactttcattatattggattggagagctgctctctcc 18870617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 155
Target Start/End: Complemental strand, 36979471 - 36979419
Alignment:
Q  102 ttgtaacccatttgtatcacttttatcttagtggattggagagctgctctctcc 155  Q
    ||||||||| |||||| |||||| ||| || |||||||||||||||||||||||    
T  36979471 ttgtaaccc-tttgtaacactttcatcatattggattggagagctgctctctcc 36979419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 208
Target Start/End: Original strand, 4696617 - 4696705
Alignment:
Q  121 cttttatcttagtggattggagagctgctctct-ccagagagtatgtcatattggaccaaactaggttaccaatcttggtatgtttgtt 208  Q
    |||| ||| ||||||||||||| |||||||||| ||  ||| || ||||||||||| | |||| ||| | |||||||||| ||||||||    
T  4696617 ctttcatcatagtggattggagggctgctctctcccccagattaggtcatattggatcgaactgggtcaacaatcttggtgtgtttgtt 4696705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 124
Target Start/End: Complemental strand, 19491853 - 19491779
Alignment:
Q  51 aaaatgggtaaaatttaggtcttgttctttgtgagctctt--aagctaatttattgtaacccatttgtatcacttt 124  Q
    |||||||||| || |||||| ||||||||||||||||  |  || ||||||| |||||||||||||||||| ||||    
T  19491853 aaaatgggtagaaattaggt-ttgttctttgtgagcttgttgaaactaatttcttgtaacccatttgtatctcttt 19491779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 124
Target Start/End: Original strand, 27811292 - 27811366
Alignment:
Q  51 aaaatgggtaaaatttaggtcttgttctttgtgagctctt--aagctaatttattgtaacccatttgtatcacttt 124  Q
    |||||||||| || |||||  ||||||||||||||||  |  |||||||||| |||||||||||||||||| ||||    
T  27811292 aaaatgggtagaaattaggg-ttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt 27811366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 124
Target Start/End: Original strand, 30143354 - 30143428
Alignment:
Q  51 aaaatgggtaaaatttaggtcttgttctttgtgagctctt--aagctaatttattgtaacccatttgtatcacttt 124  Q
    |||||||||| || |||||  ||||||||||||||||  |  |||||||||| |||||||||||||||||| ||||    
T  30143354 aaaatgggtagaaattaggg-ttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt 30143428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 92; Significance: 8e-45; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 5 - 215
Target Start/End: Complemental strand, 2630423 - 2630212
Alignment:
Q  5 ctttagtgttttctcttaggattcatagtgattgtgagtgacttgaaaaatgggtaaaatttaggtcttgttctttgtgagctcttaagctaatttattg 104  Q
    |||||||||||||||||||||||||| |||| || | |||||||||||||||  ||||| |||||| |||||||||||| | | ||||||||||||||||    
T  2630423 ctttagtgttttctcttaggattcattgtgagtgagggtgacttgaaaaatgtataaaaattaggttttgttctttgtgtgtttttaagctaatttattg 2630324  T
Q  105 taacccatttgtatcacttttatcttagtggattggagagctgctctct-ccagagagtatgtcatattggaccaaactaggttaccaatcttggtatgt 203  Q
    |||||| ||||||||||||| ||| |||||||||| ||||||||| ||| ||  | || | ||||||||||||| |||||||||| |||| ||| |  ||    
T  2630323 taacccttttgtatcactttcatcatagtggattgaagagctgctatctccctcaaagcaggtcatattggaccgaactaggttaacaatattgatgcgt 2630224  T
Q  204 ttgtttcattct 215  Q
    |||||| |||||    
T  2630223 ttgttttattct 2630212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 14 - 182
Target Start/End: Original strand, 33030854 - 33031023
Alignment:
Q  14 tttctcttaggattcatagtgattgtgagtgacttgaaaaatgggtaaaatttaggtcttgttctttgtgagctcttaagctaatttattgtaacccatt 113  Q
    ||||||||||||||||| | || |||||||||||||||||||||||| || ||| || |||||||||||||||| |||||||||||| |||||||||  |    
T  33030854 tttctcttaggattcattgagagtgtgagtgacttgaaaaatgggtagaaattatgttttgttctttgtgagcttttaagctaatttcttgtaaccccat 33030953  T
Q  114 tgtatcacttttatcttagtggattggagagctgctctct-ccagagagtatgtcatattggaccaaact 182  Q
    || |||||||| ||||||||| |||||||||||||||||| ||  ||||||||||||||| |||| ||||    
T  33030954 tgcatcactttcatcttagtgaattggagagctgctctctcccccagagtatgtcatatttgaccgaact 33031023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 5 - 208
Target Start/End: Original strand, 11181737 - 11181941
Alignment:
Q  5 ctttagtgttttctcttaggattcatagtgattgtgagtgacttgaaaaatgggtaaaatttaggtcttgttc-tttgtgagctcttaagctaatttatt 103  Q
    |||| ||||||||||||||||||||| |||| |||| ||||| |||||| |||||| || ||||||||||||| |||| ||||| ||| |||||||| ||    
T  11181737 cttttgtgttttctcttaggattcattgtgagtgtgggtgacatgaaaa-tgggtagaaattaggtcttgttcatttgagagcttttaggctaatttctt 11181835  T
Q  104 gtaacccatttgtatcacttttatcttagtggattggagagctgctctct--ccagagagtatgtcatattggaccaaactaggttaccaatcttggtat 201  Q
    ||||| ||||||||||||||| ||||||||||||||||| | ||||||||  ||  |||||| |||||||| |||| |||||||||||| |||||||| |    
T  11181836 gtaactcatttgtatcactttcatcttagtggattggagggttgctctctccccctagagtaggtcatattagaccgaactaggttacc-atcttggtgt 11181934  T
Q  202 gtttgtt 208  Q
    |||||||    
T  11181935 gtttgtt 11181941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 11 - 155
Target Start/End: Original strand, 7160815 - 7160958
Alignment:
Q  11 tgttttctcttaggattcatagtgattgtgagtgacttgaaaaatgggtaaaatttaggtcttgttctttgtgagctcttaagctaatttattgtaaccc 110  Q
    |||||||||||||||||||| | || ||| |||||||| ||||||  ||| || ||| ||||||||||||||||||| | || ||||||| |||||||||    
T  7160815 tgttttctcttaggattcattgagagtgt-agtgacttaaaaaatatgtagaaattaagtcttgttctttgtgagctttaaatctaattttttgtaaccc 7160913  T
Q  111 atttgtatcacttttatcttagtggattggagagctgctctctcc 155  Q
     ||||||||||||| |||| ||||||||||||||||| |||||||    
T  7160914 ctttgtatcactttcatctgagtggattggagagctgatctctcc 7160958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 10 - 182
Target Start/End: Complemental strand, 6742039 - 6741866
Alignment:
Q  10 gtgttttctcttaggattcatagtgattgtgagtgacttgaaaaatgggtaaaatttaggtcttgttctttgtgagctcttaagctaatttattgtaacc 109  Q
    ||||||| ||||||||||||| | || |||| ||||||||||||||| ||| || |||||| |||||||||||||| |   |||||||||| |||||||     
T  6742039 gtgttttttcttaggattcattgagagtgtgggtgacttgaaaaatgagtagaaattaggttttgttctttgtgagtttgcaagctaatttcttgtaact 6741940  T
Q  110 catttgtatcacttttatcttagtggattggagagctgctctct-ccagagagtatgtcatattggaccaaact 182  Q
      ||||||||||||  |||||| ||||||||||||||||||| | ||  |||||||||||||||| ||| ||||    
T  6741939 tctttgtatcacttccatcttaatggattggagagctgctctatcccccagagtatgtcatattgaaccgaact 6741866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 10281948 - 10281727
Alignment:
Q  1 ctttctttagtgttttctcttaggattcata--gtgattgtgagtgacttgaaaaatgggtaaaatttaggtcttgttctt-tgtgagctcttaagctaa 97  Q
    |||||||| ||||||||||||||||||||||  |||| |||| |||||    |||||||||| || ||||||||||||||| ||| ||||  ||||||||    
T  10281948 ctttcttttgtgttttctcttaggattcatattgtgagtgtgggtgacac--aaaatgggtagaaattaggtcttgttcttgtgtaagcttgtaagctaa 10281851  T
Q  98 tttattgtaacccatttgtatcacttttatcttagtggattggagagctgctctct-ccagagagtatgtcatattggaccaaactaggttaccaatc-t 195  Q
    ||| ||||||| | |||||| |||||| ||| |||||||||||||||||||||||| ||  |||  | ||||||||||||| |||| ||| | ||||| |    
T  10281850 tttcttgtaactcttttgtaacactttcatcatagtggattggagagctgctctctcccccagatcaggtcatattggaccgaactgggtcaacaatctt 10281751  T
Q  196 tggtatgtttgtttcattctttct 219  Q
    |||| |||||||| | ||||||||    
T  10281750 tggtgtgtttgttcctttctttct 10281727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 42127311 - 42127529
Alignment:
Q  1 ctttctttagtgttttctcttaggattcatagtgattgtgagtgacttgaaaaatgggtaaaatttaggtcttgttc-tttgtgagctcttaagctaatt 99  Q
    |||||||| ||||||||||||||||||||| | || |||| ||||  ||||||||||||| ||  |||| ||||||| ||||| ||||  ||||||||||    
T  42127311 ctttcttttgtgttttctcttaggattcattgagagtgtgggtgatatgaaaaatgggtagaaagtaggacttgttcttttgtaagcttataagctaatt 42127410  T
Q  100 tattgtaacccatttgtatcacttttatcttagtggattggagagctgctctct-ccagagagtatgtcatattggaccaaactaggttaccaatcttgg 198  Q
    | ||||||| || ||||| |||||| ||||||||||||||| | |||||||||| ||  ||| || |||||||| || | |||| ||| | |||||||||    
T  42127411 tcttgtaactca-ttgtaacactttcatcttagtggattggggggctgctctctcccccagattaggtcatattagatcgaactgggtcaacaatcttgg 42127509  T
Q  199 tatgtttgtttcattctttc 218  Q
    | |||||||| | |||||||    
T  42127510 tgtgtttgttcctttctttc 42127529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 5 - 218
Target Start/End: Complemental strand, 28832449 - 28832237
Alignment:
Q  5 ctttagtgttttctcttaggattcatagtgattgtgagtgacttgaaaaatgggtaaaatttaggtcttgttctttgtgagctcttaagctaatttattg 104  Q
    |||| ||||||||||||||||||||| | || |||| ||||  ||||||||||||| || ||||  |||||||||| ||  ||  ||||||||||| |||    
T  28832449 cttttgtgttttctcttaggattcattgagagtgtgggtgatatgaaaaatgggtagaaattagaacttgttcttt-tgtacttataagctaatttcttg 28832351  T
Q  105 taacccatttgtatcacttttatcttagtggattggagagctgctctct-ccagagagtatgtcatattggaccaaactaggttaccaatcttggtatgt 203  Q
    |||| || ||||| |||||| ||||||||||||||||| |||||||||| ||  ||| || ||||||||||||| |||  ||| | |||||||||| |||    
T  28832350 taactca-ttgtaacactttcatcttagtggattggagggctgctctctcccccagattaggtcatattggaccgaaccgggtcaacaatcttggtgtgt 28832252  T
Q  204 ttgtttcattctttc 218  Q
    ||||||  |||||||    
T  28832251 ttgtttgtttctttc 28832237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 155
Target Start/End: Complemental strand, 19588937 - 19588788
Alignment:
Q  5 ctttagtgttttctcttaggattcatagtgattgtgagtgacttgaaaaatgggtaaaatttaggtcttgttctt-tgtgagctcttaagctaatttatt 103  Q
    |||| ||||||||||||||||||||| | ||||||| |||||   ||||  ||||| || ||||||||||||||| ||| ||||  |||| |||||| ||    
T  19588937 cttttgtgttttctcttaggattcattgagattgtgggtgacacaaaaa--gggtagaaattaggtcttgttcttgtgtaagcttataaggtaatttctt 19588840  T
Q  104 gtaacccatttgtatcacttttatcttagtggattggagagctgctctctcc 155  Q
    ||||| | |||||| |||||| ||| ||||||||||||| ||||||||||||    
T  19588839 gtaactcttttgtaacactttcatcatagtggattggagggctgctctctcc 19588788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 5 - 218
Target Start/End: Original strand, 17003864 - 17004079
Alignment:
Q  5 ctttagtgttttctcttaggattcatagtgattgtgagtgacttgaa--aaatgggtaaaatttaggtcttgttctt-tgtgagctcttaagctaattta 101  Q
    |||| |||||||||||||||||||||| ||  || |||||| |  ||  ||||||||| || ||||||||||||||| ||| ||||  |||| ||||||     
T  17003864 cttttgtgttttctcttaggattcatattg--tgagagtgagtgaaattaaatgggtagaaattaggtcttgttcttgtgtaagcttgtaagttaatttt 17003961  T
Q  102 ttgtaacccatttgtatcacttttatcttagtggattggagagctgctctct-ccagagagtatgtcatattggaccaaactaggttaccaatcttggta 200  Q
    ||||||| | |||| |  ||||| ||| |||||||||| ||||||||||||| ||  ||| || ||||||||||||| |||| ||| | ||||||||||     
T  17003962 ttgtaactcttttgaaatactttcatcatagtggattgaagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatcttggtg 17004061  T
Q  201 tgtttgtttcattctttc 218  Q
    |||||||| | |||||||    
T  17004062 tgtttgttcctttctttc 17004079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 51 - 153
Target Start/End: Complemental strand, 3880446 - 3880343
Alignment:
Q  51 aaaatgggtaaaatttaggtcttgttctt-tgtgagctcttaagctaatttattgtaacccatttgtatcacttttatcttagtggattggagagctgct 149  Q
    |||||||||| || ||||||||||||||| ||| ||||  ||| ||||||| ||||||| | |||||| |||||| ||| ||||||||||||||||||||    
T  3880446 aaaatgggtagaaattaggtcttgttcttgtgtaagcttgtaaactaatttcttgtaactcttttgtaacactttcatcatagtggattggagagctgct 3880347  T
Q  150 ctct 153  Q
    ||||    
T  3880346 ctct 3880343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 52 - 153
Target Start/End: Original strand, 12084127 - 12084228
Alignment:
Q  52 aaatgggtaaaatttaggtcttgttctt-tgtgagctcttaagctaatttattgtaacccatttgtatcacttttatcttagtggattggagagctgctc 150  Q
    ||||||||| || ||||||||||||||| ||| |||| ||||| |||||| ||||||| | |||||| |||||| ||| |||||||||||||||||||||    
T  12084127 aaatgggtagaaattaggtcttgttcttgtgtaagcttttaagttaatttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgctc 12084225  T
Q  151 tct 153  Q
    |||    
T  12084226 tct 12084228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 2 - 155
Target Start/End: Complemental strand, 34842798 - 34842645
Alignment:
Q  2 tttctttagtgttttctcttaggattcatagtgattgtgagtgacttgaaaaatgggtaaaatttaggtcttgttctttgtgagctcttaagctaattta 101  Q
    |||||||||||| ||||||||| |||||| |||  | | |||||||||||||||| ||| || |||||   ||||||| |||||||  |||| |||  |     
T  34842798 tttctttagtgtgttctcttagaattcattgtgggttttagtgacttgaaaaatgagtagaaattaggatatgttcttggtgagcttgtaagataacatc 34842699  T
Q  102 ttgtaacccatttgtatcacttttatcttagtggattggagagctgctctctcc 155  Q
    ||||||||  |||||||||||  |  | ||||||||| ||||||||||||||||    
T  34842698 ttgtaacctctttgtatcactcattacatagtggattagagagctgctctctcc 34842645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 218
Target Start/End: Original strand, 24553499 - 24553625
Alignment:
Q  91 aagctaatttattgtaacccatttgtatcacttttatcttagtggattggagagctgctctctcc-agagagtatgtcatattggaccaaactaggttac 189  Q
    |||||||||| ||||||| |||| ||| |||||| ||||||||||| ||||| |||||||||||| | ||| || ||||||||||||| |||| | | |     
T  24553499 aagctaatttcttgtaactcatt-gtaacactttcatcttagtggagtggag-gctgctctctcccatagattaggtcatattggaccgaactggatcaa 24553596  T
Q  190 caatcttggtatgtttgtttcattctttc 218  Q
    |||||||||| |||||||| | |||||||    
T  24553597 caatcttggtgtgtttgttcctttctttc 24553625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 51 - 208
Target Start/End: Original strand, 11916922 - 11917081
Alignment:
Q  51 aaaatgggtaaaatttaggtcttgttctt-tgtgagctcttaagctaatttattgtaacccatttgtatcacttttatcttagtggattggagagctgct 149  Q
    |||||||||| || ||||||||||||||| ||| ||||   || ||| ||| ||||||| | |||||| |||||| ||  ||||||||||||||||||||    
T  11916922 aaaatgggtagaaattaggtcttgttcttgtgtaagcttgcaaactattttcttgtaactcttttgtaacactttcattatagtggattggagagctgct 11917021  T
Q  150 ctct-ccagagagtatgtcatattggaccaaactaggttaccaatcttggtatgtttgtt 208  Q
    |||| ||  | | || ||||||||||||| |||| ||| | |||||| ||| ||||||||    
T  11917022 ctctcccccatattaggtcatattggaccgaactgggtcaacaatctcggtgtgtttgtt 11917081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 111 - 154
Target Start/End: Complemental strand, 28537712 - 28537669
Alignment:
Q  111 atttgtatcacttttatcttagtggattggagagctgctctctc 154  Q
    |||| |||||||||||||||||||||||||||||||||||||||    
T  28537712 atttatatcacttttatcttagtggattggagagctgctctctc 28537669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 208
Target Start/End: Original strand, 31300500 - 31300705
Alignment:
Q  5 ctttagtgttttctcttaggattcatagtgattgtgagtgacttgaaaaatgggtaaaatttaggtcttgttctt-tgtgagctcttaagctaattta-t 102  Q
    |||| ||||||||||||||||||||| | || |||| ||||  ||| ||||||||| || ||||| ||||||||| ||| ||||   || ||| |||  |    
T  31300500 cttttgtgttttctcttaggattcattgagagtgtgggtgatatgagaaatgggtagaaattaggacttgttcttgtgtaagcttgcaaactatttttct 31300599  T
Q  103 tgtaacccatttgtatcacttttatcttagtggattggagagctgctctct-ccagagagtatgtcatattggaccaaactaggttaccaatcttggtat 201  Q
    || ||| ||||  || |||||| ||||||||||||||||||| | |||||| ||  ||| || ||||||||||||| |||| ||| | |||||||||| |    
T  31300600 tgcaactcatta-taacactttcatcttagtggattggagagtttctctctccctcagactaggtcatattggaccgaactgggtcaacaatcttggtgt 31300698  T
Q  202 gtttgtt 208  Q
    |||||||    
T  31300699 gtttgtt 31300705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 49 - 124
Target Start/End: Original strand, 33831692 - 33831768
Alignment:
Q  49 gaaaaatgggtaaaatttaggtcttgttctttgtgagctc--ttaagctaatttattgtaacccatttgtatcacttt 124  Q
    |||||||||||| || |||||| ||||||||||||||||   |||||||||||| |||||||||||||||||| ||||    
T  33831692 gaaaaatgggtagaaattaggt-ttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatctcttt 33831768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 30900062 - 30899910
Alignment:
Q  1 ctttctttagtgttttctcttaggattcatagtgattgtgagtgacttgaaaaatgggtaaaatttaggtcttgttctttgtgagctcttaagctaattt 100  Q
    |||||||||||||||||||| ||||||| | |||  | |||||| ||||||||||  ||| ||  |||   ||||||||||||||||  || ||||||||    
T  30900062 ctttctttagtgttttctct-aggattctttgtgggtttgagtggcttgaaaaatcagtagaaaatagagtttgttctttgtgagcttgtaggctaattt 30899964  T
Q  101 attgtaacccatttgtatcacttttatcttagtggattggagagctgctctctc 154  Q
     ||||||||  ||||||||||| || || || | ||| |||||||| |||||||    
T  30899963 cttgtaacctctttgtatcactcttctcataatagatcggagagcttctctctc 30899910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 119
Target Start/End: Complemental strand, 8566100 - 8566031
Alignment:
Q  51 aaaatgggtaaaatttaggtcttgttctttgtgagctc--ttaagctaatttattgtaacccatttgtatc 119  Q
    |||||||||| || |||||| ||||||||||||||||   |||||||||||| ||||||||||||||||||    
T  8566100 aaaatgggtagaacttaggt-ttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatc 8566031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 52 - 218
Target Start/End: Complemental strand, 14520375 - 14520206
Alignment:
Q  52 aaatgggtaaaatttaggtcttgttctt-tgtgagctcttaagctaatttattgtaacccatttgtatcacttttatcttagtggattggagagctgctc 150  Q
    ||||||||| || ||||||||||||||| ||| ||||   |||||| ||| ||||||| | |||||| |||||| ||| |||||||||| ||||||||||    
T  14520375 aaatgggtagaaattaggtcttgttcttgtgtaagcttgcaagctattttcttgtaactc-tttgtaacactttcatcatagtggattgaagagctgctc 14520277  T
Q  151 t-ctccagagagtatgtcatattggaccaaactaggttaccaatc--ttggtatgtttgtttcattctttc 218  Q
    | | ||  ||| || ||||||||||||| |||| ||| | |||||  ||||| |||||||| | |||||||    
T  14520276 tcccccctagattaggtcatattggaccgaactgggtcaacaatcttttggtgtgtttgttcctttctttc 14520206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 52 - 196
Target Start/End: Original strand, 9353284 - 9353429
Alignment:
Q  52 aaatgggtaaaatttaggtcttgttctt-tgtgagctcttaagctaatttattgtaacccatttgtatcacttttatcttagtggattggagagctgctc 150  Q
    ||||||||| || |||| |||||||||| ||| ||||   |||||  ||| ||||||| | |||||| |||||| ||| |||||||||||||||||||||    
T  9353284 aaatgggtagaaattagatcttgttcttgtgtaagcttgcaagcttttttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgctc 9353382  T
Q  151 tct-ccagagagtatgtcatattggaccaaactaggttaccaatctt 196  Q
    ||| ||  ||| || ||||||||||||| |||| ||| | |||||||    
T  9353383 tctcccccagattaggtcatattggaccgaactgggtcaacaatctt 9353429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 52 - 155
Target Start/End: Complemental strand, 15464678 - 15464574
Alignment:
Q  52 aaatgggtaaaatttaggtcttgttctt-tgtgagctcttaagctaattta-ttgtaacccatttgtatcacttttatcttagtggattggagagctgct 149  Q
    ||||||||| || ||||||||||||||| ||| ||||   |||||| |||  ||||||| | |||||| |||||| ||| ||||||||||||||||||||    
T  15464678 aaatgggtagaaattaggtcttgttcttgtgtaagcttgcaagctatttttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgct 15464580  T
Q  150 ctctcc 155  Q
    ||||||    
T  15464579 ctctcc 15464574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 112 - 196
Target Start/End: Original strand, 36932362 - 36932447
Alignment:
Q  112 tttgtatcacttttatcttagtggattggagagctgctctct-ccagagagtatgtcatattggaccaaactaggttaccaatctt 196  Q
    |||||| |||||| ||| |||||||||||||||||||||||| ||  ||| || ||||||||||||| |||| ||| | |||||||    
T  36932362 tttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatctt 36932447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 102 - 155
Target Start/End: Complemental strand, 38192267 - 38192215
Alignment:
Q  102 ttgtaacccatttgtatcacttttatcttagtggattggagagctgctctctcc 155  Q
    ||||||||| |||||| |||||| ||| ||||||||||||||||||||||||||    
T  38192267 ttgtaaccc-tttgtaacactttcatcatagtggattggagagctgctctctcc 38192215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 102 - 155
Target Start/End: Complemental strand, 38219492 - 38219440
Alignment:
Q  102 ttgtaacccatttgtatcacttttatcttagtggattggagagctgctctctcc 155  Q
    ||||||||| |||||| |||||| ||| ||||||||||||||||||||||||||    
T  38219492 ttgtaaccc-tttgtaacactttcatcatagtggattggagagctgctctctcc 38219440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 72 - 124
Target Start/End: Complemental strand, 5887550 - 5887496
Alignment:
Q  72 ttgttctttgtgagctc--ttaagctaatttattgtaacccatttgtatcacttt 124  Q
    ||||||||||||||||   |||||||||||| ||| |||||||||||||||||||    
T  5887550 ttgttctttgtgagcttgtttaagctaatttcttgcaacccatttgtatcacttt 5887496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 84
Target Start/End: Complemental strand, 3651658 - 3651613
Alignment:
Q  39 tgagtgacttgaaaaatgggtaaaatttaggtcttgttctttgtga 84  Q
    |||||||||||||||||||||| || |||||  |||||||||||||    
T  3651658 tgagtgacttgaaaaatgggtagaaattagggtttgttctttgtga 3651613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 72 - 137
Target Start/End: Complemental strand, 5611267 - 5611202
Alignment:
Q  72 ttgttctttgtgagctcttaagctaatttattgtaacccatttgtatcacttttatcttagtggat 137  Q
    ||||||||||||| || |||||||||||| || ||| |  ||||||||| ||||||| ||||||||    
T  5611267 ttgttctttgtgaacttttaagctaattttttttaatctctttgtatcagttttatcatagtggat 5611202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 155
Target Start/End: Complemental strand, 24135942 - 24135890
Alignment:
Q  102 ttgtaacccatttgtatcacttttatcttagtggattggagagctgctctctcc 155  Q
    ||||||||| |||||| |||||| ||||||||| |||||| |||||||||||||    
T  24135942 ttgtaaccc-tttgtaacactttcatcttagtgcattggatagctgctctctcc 24135890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 155
Target Start/End: Complemental strand, 35387756 - 35387704
Alignment:
Q  102 ttgtaacccatttgtatcacttttatcttagtggattggagagctgctctctcc 155  Q
    ||||||||| |||||| |||||| ||| |||| |||||||||||||||||||||    
T  35387756 ttgtaaccc-tttgtaacactttcatcatagtagattggagagctgctctctcc 35387704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 124
Target Start/End: Original strand, 213479 - 213553
Alignment:
Q  51 aaaatgggtaaaatttaggtcttgttctttgtgagctctt--aagctaatttattgtaacccatttgtatcacttt 124  Q
    |||||||||| || |||||  ||||||||||||||||  |  |||||||||| |||||||||||||||||| ||||    
T  213479 aaaatgggtagaaattaggg-ttgttctttgtgagcttgttaaagctaatttcttgtaacccatttgtatctcttt 213553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 124
Target Start/End: Original strand, 38747019 - 38747093
Alignment:
Q  51 aaaatgggtaaaatttaggtcttgttctttgtgagctctt--aagctaatttattgtaacccatttgtatcacttt 124  Q
    |||||||||| || |||||  ||||||||||||||||  |  |||||||||| |||||||||||||||||| ||||    
T  38747019 aaaatgggtagaaattaggg-ttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt 38747093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 88; Significance: 2e-42; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 11 - 209
Target Start/End: Complemental strand, 5112423 - 5112225
Alignment:
Q  11 tgttttctcttaggattcatagtgattgtgagtgacttgaaaaatgggtaaaatttaggtcttgttctttgtgagctcttaagctaatttattgtaaccc 110  Q
    |||||||||||||||||||| |||| |||||||||||| |||||| |||| || |||||||| ||| ||| |||| | |||||||||||| |||||||||    
T  5112423 tgttttctcttaggattcattgtgagtgtgagtgacttaaaaaataggtacaaattaggtctcgttttttatgagtttttaagctaatttcttgtaaccc 5112324  T
Q  111 atttgtatcacttttatcttagtggattggagagctgctctc-tccagagagtatgtcatattggaccaaactaggttaccaatcttggtatgtttgttt 209  Q
    ||||||| |||||| || ||||||||||||||||||||||||  ||  | ||||  |||||||||||| |||| ||||||| |||||||| |||||||||    
T  5112323 atttgtaacactttcatattagtggattggagagctgctctcacccccaaagtagatcatattggaccgaactgggttacc-atcttggtgtgtttgttt 5112225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 13 - 191
Target Start/End: Original strand, 39774218 - 39774397
Alignment:
Q  13 ttttctcttaggattcatagtgattgtgagtgacttgaaaaatgggtaaaatttaggtcttgtt-ctttgtgagctcttaagctaatttattgtaaccca 111  Q
    ||||||||| |||||||| | || |||||||||| |||||| ||| || || |||||||||||| ||||||||||| |||||||||||| |||||||| |    
T  39774218 ttttctcttgggattcattgagagtgtgagtgacatgaaaattgg-tagaaattaggtcttgtttctttgtgagcttttaagctaatttcttgtaaccta 39774316  T
Q  112 tttgtatcacttttatcttagtggattggagagctgctctct-ccagagagtatgtcatattggaccaaactaggttacca 191  Q
    ||||||||||||| || ||||||||||||||||||||||| | ||  |||||| ||||||||||||| ||||  |||||||    
T  39774317 tttgtatcactttcattttagtggattggagagctgctctatcccccagagtaggtcatattggaccgaactgagttacca 39774397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 12 - 209
Target Start/End: Original strand, 1983213 - 1983409
Alignment:
Q  12 gttttctcttaggattcatagtgattgtgagtgacttgaaaaatgggtaaaatttaggtcttgttctttgtgagctcttaagctaatttattgtaaccca 111  Q
    ||||||||||||||||||| | || |||  ||||||||||||| || || || ||| || ||||||||||||||||   |||||||||| |||||||||     
T  1983213 gttttctcttaggattcattgagagtgtaggtgacttgaaaaa-ggatagaaattatgttttgttctttgtgagcttgcaagctaatttcttgtaacccc 1983311  T
Q  112 tttgtatcacttttatcttagtggattggagagctgctctct-ccagagagtatgtcatattggaccaaactaggttaccaatcttggtatgtttgttt 209  Q
    ||||||||||||| ||| |||||||||||||||||||| ||| ||  | |||| ||||||||||||| |||| ||||||| || ||||| |||||||||    
T  1983312 tttgtatcactttgatcctagtggattggagagctgctatctcccccatagtaggtcatattggaccgaactgggttacc-atattggtgtgtttgttt 1983409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 10 - 209
Target Start/End: Complemental strand, 18377546 - 18377347
Alignment:
Q  10 gtgttttctcttaggattcatagtgattgtgagtgacttgaaaaatgggtaaaatttaggtcttgtt-ctttgtgagctcttaagctaatttattgtaac 108  Q
    ||||||| ||||||||||||| || | |||| ||||| |||||| |||||| || ||||| |||||| ||||||||||| ||||||| |||| || ||||    
T  18377546 gtgttttttcttaggattcattgtaagtgtgggtgacatgaaaa-tgggtagaaattagggcttgtttctttgtgagcttttaagctgatttcttataac 18377448  T
Q  109 ccatttgtatcacttttatcttagtggattggagagctgctctctcc-agagagtatgtcatattggaccaaactaggttaccaatcttggtatgtttgt 207  Q
    |||||||||||||||| ||||||||||| ||||| ||||||||||||   |||||| ||||||| | ||  |||| ||||||| |||||||| |||||||    
T  18377447 ccatttgtatcactttcatcttagtggaatggagggctgctctctcctccagagtaggtcatatagaactgaactgggttacc-atcttggtgtgtttgt 18377349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 2 - 109
Target Start/End: Original strand, 34670567 - 34670674
Alignment:
Q  2 tttctttagtgttttctcttaggattcatagtgattgtgagtgacttgaaaaatgggtaaaatttaggtcttgttctttgtgagctcttaagctaattta 101  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| || || ||| |  |||||||||||||||| ||||||||||||     
T  34670567 tttctttagtgttttctcttaggattcattgtgagtgtgagtgacttgaaaaatggatagaaattatgatttgttctttgtgagctattaagctaatttc 34670666  T
Q  102 ttgtaacc 109  Q
    ||||||||    
T  34670667 ttgtaacc 34670674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 3 - 146
Target Start/End: Original strand, 18912266 - 18912409
Alignment:
Q  3 ttctttagtgttttctcttaggattcatagtgattgtgagtgacttgaaaaatgggtaaaatttaggtcttgttctttgtgagctcttaagctaatttat 102  Q
    ||||||| | |||||||||||||||||| |||  | ||||||||||||||||||| || ||||||||  |||||||||||||| |  ||| ||||||| |    
T  18912266 ttctttattattttctcttaggattcattgtgggtttgagtgacttgaaaaatggatataatttagggtttgttctttgtgagtttgtaaactaatttct 18912365  T
Q  103 tgtaacccatttgtatcacttttatcttagtggattggagagct 146  Q
    |||| ||  ||||||||||| ||||| |||||||||||||||||    
T  18912366 tgtatcctttttgtatcactcttatcatagtggattggagagct 18912409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 51 - 218
Target Start/End: Complemental strand, 10047526 - 10047357
Alignment:
Q  51 aaaatgggtaaaatttaggtcttgttctt-tgtgagctcttaagctaatttattgtaacccatttgtatcacttttatcttagtggattggagagctgct 149  Q
    |||||||||| || ||||||||||||||| ||| ||||  ||||||||||| ||||||| | |||||| |||||| ||| ||||||||||||| ||||||    
T  10047526 aaaatgggtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgct 10047427  T
Q  150 ctct-ccagagagtatgtcatattggaccaaactaggttaccaatcttggtatgtttgtttcattctttc 218  Q
    |||| ||  ||| || ||||||||||||| |||| ||| | |||||||||| |||||||| | |||||||    
T  10047426 ctctcccccagattaggtcatattggaccgaactgggtcaacaatcttggtgtgtttgttcctttctttc 10047357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 102 - 209
Target Start/End: Original strand, 34495825 - 34495932
Alignment:
Q  102 ttgtaacccatttgtatcacttttatcttagtggattggagagctgctctct-ccagagagtatgtcatattggaccaaactaggttaccaatcttggta 200  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||||||| ||  |||||| ||||| ||||||| |||||||||||| ||||||||     
T  34495825 ttgtaacccatttgtatcactttcatcttagtggattggagggctgctctctcccccagagtaagtcatgttggaccgaactaggttacc-atcttggtg 34495923  T
Q  201 tgtttgttt 209  Q
    |||||||||    
T  34495924 tgtttgttt 34495932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 6 - 154
Target Start/End: Complemental strand, 37782054 - 37781905
Alignment:
Q  6 tttagtgttttctcttaggattcatagt-gattgtgagtgacttgaaaaatgggtaaaatttaggtcttgttctttgtgagctcttaagctaatttattg 104  Q
    ||||||||||||||||| |||||||    || |||  ||||||||||||||||||| || ||| |  |||||||||||||| | |||||||||||| |||    
T  37782054 tttagtgttttctcttaagattcatttacgagtgtaggtgacttgaaaaatgggtagaaattaagatttgttctttgtgagtttttaagctaatttcttg 37781955  T
Q  105 taacccatttgtatcacttttatcttagtggattggagagctgctctctc 154  Q
    |||||  ||||||||||||||||  ||||||||||||||| | |||||||    
T  37781954 taacctctttgtatcacttttattatagtggattggagagttactctctc 37781905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 51 - 218
Target Start/End: Original strand, 38152389 - 38152558
Alignment:
Q  51 aaaatgggtaaaatttaggtcttgttctt-tgtgagctcttaagctaatttattgtaacccatttgtatcacttttatcttagtggattggagagctgct 149  Q
    ||||| |||| || ||||||||||||||| ||| ||||  ||||||||||| || |||| | |||||| |||||| | | ||||||||||||||||||||    
T  38152389 aaaattggtagaaattaggtcttgttcttgtgtaagcttataagctaatttcttataactcttttgtaacactttcaccatagtggattggagagctgct 38152488  T
Q  150 ctct-ccagagagtatgtcatattggaccaaactaggttaccaatcttggtatgtttgtttcattctttc 218  Q
    |||| ||  ||| |||||||||||||||| |||| ||| | |||||||||| |||||||| | |||||||    
T  38152489 ctctcccccagattatgtcatattggaccgaactgggtcaacaatcttggtgtgtttgttcctttctttc 38152558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 51 - 208
Target Start/End: Original strand, 16623243 - 16623402
Alignment:
Q  51 aaaatgggtaaaatttaggtcttgttctt-tgtgagctcttaagctaatttattgtaacccatttgtatcacttttatcttagtggattggagagctgct 149  Q
    |||||||||| || ||||||||||||||| ||| ||||  | ||||||||| ||||||| | |||||| |||||| ||| ||||||||||||||||||||    
T  16623243 aaaatgggtagaaattaggtcttgttcttctgtaagcttattagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagagctgct 16623342  T
Q  150 ctctcc-agagagtatgtcatattggaccaaactaggttaccaatcttggtatgtttgtt 208  Q
    ||||||   ||| || ||||||||| ||| |||| ||| | |||||||||| ||||||||    
T  16623343 ctctcctccagattaggtcatattgaaccgaactgggtcaacaatcttggtgtgtttgtt 16623402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 65 - 208
Target Start/End: Original strand, 16630644 - 16630789
Alignment:
Q  65 ttaggtcttgttctt-tgtgagctcttaagctaatttattgtaacccatttgtatcacttttatcttagtggattggagagctgctctctcc-agagagt 162  Q
    |||| |||||||||| ||| ||||  ||||||||||| ||||||| | |||||| |||||| ||| |||||||||||||||||| |||||||   ||| |    
T  16630644 ttagatcttgttcttgtgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagagctgttctctcctccagatt 16630743  T
Q  163 atgtcatattggaccaaactaggttaccaatcttggtatgtttgtt 208  Q
    ||||||||||||||| |||||||| | ||| |||||| ||||||||    
T  16630744 atgtcatattggaccgaactaggtcaacaaccttggtgtgtttgtt 16630789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 52 - 218
Target Start/End: Original strand, 36315181 - 36315348
Alignment:
Q  52 aaatgggtaaaatttaggtcttgttctt-tgtgagctcttaagctaatttattgtaacccatttgtatcacttttatcttagtggattggagagctgctc 150  Q
    ||||||||| || |||||||||| |||| ||| ||||  ||||||||||| ||||||| | |||||| |||||| ||| |||||||||||||||||||||    
T  36315181 aaatgggtagaaattaggtcttgctcttgtgtaagcttctaagctaatttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgctc 36315279  T
Q  151 tct-ccagagagtatgtcatattggaccaaactaggttaccaatcttggtatgtttgtttcattctttc 218  Q
    ||| ||  ||| || ||||||||||||| |||| ||| | || ||||||| |||||||| | |||||||    
T  36315280 tctcccccagattaggtcatattggaccgaactgggtcaacattcttggtgtgtttgttcctttctttc 36315348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 52 - 218
Target Start/End: Original strand, 36329390 - 36329557
Alignment:
Q  52 aaatgggtaaaatttaggtcttgttctt-tgtgagctcttaagctaatttattgtaacccatttgtatcacttttatcttagtggattggagagctgctc 150  Q
    ||||||||| || |||||||||| |||| ||| ||||  ||||||||||| ||||||| | |||||| |||||| ||| |||||||||||||||||||||    
T  36329390 aaatgggtagaaattaggtcttgctcttgtgtaagcttctaagctaatttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgctc 36329488  T
Q  151 tct-ccagagagtatgtcatattggaccaaactaggttaccaatcttggtatgtttgtttcattctttc 218  Q
    ||| ||  ||| || ||||||||||||| |||| ||| | || ||||||| |||||||| | |||||||    
T  36329489 tctcccccagattaggtcatattggaccgaactgggtcaacattcttggtgtgtttgttcctttctttc 36329557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 51 - 208
Target Start/End: Original strand, 6743366 - 6743523
Alignment:
Q  51 aaaatgggtaaaatttaggtcttgttcttt-gtgagctcttaagctaatttattgtaacccatttgtatcacttttatcttagtggattggagagctgct 149  Q
    |||||||||| || |||||||||||||||| || |||| | |||||||||| ||||| | | |||||| |||||| ||| ||||||||||||| ||||||    
T  6743366 aaaatgggtagaaattaggtcttgttcttttgtaagctat-aagctaattttttgtagctcttttgtaacactttcatcatagtggattggagggctgct 6743464  T
Q  150 ctctccag-agagtatgtcatattggaccaaactaggttaccaatcttggtatgtttgtt 208  Q
    |||||| | ||| || ||||||||||||| |||| ||| | | |||||||| ||||||||    
T  6743465 ctctcccgtagattaggtcatattggaccgaactgggtcaac-atcttggtgtgtttgtt 6743523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 90 - 218
Target Start/End: Complemental strand, 24333916 - 24333787
Alignment:
Q  90 taagctaatttattgtaacccatttgtatcacttttatcttagtggattggagagctgctctct-ccagagagtatgtcatattggaccaaactaggtta 188  Q
    ||||||||||| || |||| | |||||| ||| || ||| |||||||||||||||||||||||| ||  | | || ||||||||||||| ||||  ||||    
T  24333916 taagctaattttttataactcttttgtaacacgttcatcatagtggattggagagctgctctctcccccaaattaggtcatattggaccgaactgagtta 24333817  T
Q  189 ccaatcttggtatgtttgtttcattctttc 218  Q
     |||||||||| |||||||||| |||||||    
T  24333816 acaatcttggtgtgtttgtttctttctttc 24333787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 5 - 218
Target Start/End: Original strand, 42599479 - 42599693
Alignment:
Q  5 ctttagtgttttctcttaggattcatagtgattgtgagtgacttgaaaaatgggtaaaatttaggtcttgttc-tttgtgagctcttaagctaatttatt 103  Q
    |||| ||||||||||||||||||||| | || || | |||||    |||||||||| || ||||||||||||| ||||| ||||  ||||||||||| ||    
T  42599479 cttttgtgttttctcttaggattcattgagagtgcgggtgacac--aaaatgggtagaaattaggtcttgttcttttgtaagcttataagctaatttctt 42599576  T
Q  104 gtaacccatttgtatcacttttatcttagtggattggagagctgctctct---ccagagagtatgtcatattggaccaaactaggttaccaatcttggta 200  Q
    ||||| || ||||| || ||| ||||||||||||||||| | ||||||||   ||  | | |||||||||||||||  || | ||| | ||||||||||     
T  42599577 gtaactca-ttgtaacattttcatcttagtggattggagggttgctctctctcccccatattatgtcatattggactgaattgggtcaacaatcttggtg 42599675  T
Q  201 tgtttgtttcattctttc 218  Q
    |||||||| | |||||||    
T  42599676 tgtttgttcctttctttc 42599693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 51 - 218
Target Start/End: Complemental strand, 54867330 - 54867162
Alignment:
Q  51 aaaatgggtaaaatttaggtcttgttctt-tgtgagctcttaagctaatttattgtaacccatttgtatcacttttatcttagtggattggagagctgct 149  Q
    |||||||||| || |||||| |||||||| ||| ||||  ||||||||||| || ||||   |||||| || ||| ||| |||| ||||| || ||||||    
T  54867330 aaaatgggtagaaattaggtattgttcttgtgtaagcttataagctaatttcttataactattttgtaacattttcatcatagttgattgaagggctgct 54867231  T
Q  150 ctctccagagagtatgtcatattggaccaaactaggttaccaatcttggtatgtttgtttcattctttc 218  Q
    ||||||  ||| || ||||||||||||| |||| ||| | |||||||||| |||||||| | |||||||    
T  54867230 ctctccccagactaggtcatattggaccgaactgggtcaacaatcttggtgtgtttgttcctttctttc 54867162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 102 - 196
Target Start/End: Original strand, 31985637 - 31985730
Alignment:
Q  102 ttgtaacccatttgtatcacttttatcttagtggattggagagctgctctctccagagagtatgtcatattggaccaaactaggttaccaatctt 196  Q
    ||||||||| |||||| |||||| ||| ||||||||||||||||||||||||||  ||| || ||||||||||||| |||| ||| | |||||||    
T  31985637 ttgtaaccc-tttgtaacactttcatcatagtggattggagagctgctctctccccagattaggtcatattggaccgaactgggtcaacaatctt 31985730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 97 - 218
Target Start/End: Complemental strand, 39246094 - 39245972
Alignment:
Q  97 atttattgtaacccatttgtatcacttttatcttagtggattggagagctgctctct-ccagagagtatgtcatattggaccaaactaggttaccaatct 195  Q
    |||| ||||||| | |||||| |||||| ||| ||||||||||||| |||||||||| ||  ||| || ||||||||||||| |||| ||| | ||||||    
T  39246094 atttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatct 39245995  T
Q  196 tggtatgtttgtttcattctttc 218  Q
    |||| |||||||| | |||||||    
T  39245994 tggtgtgtttgttcctttctttc 39245972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 51 - 155
Target Start/End: Original strand, 3796469 - 3796574
Alignment:
Q  51 aaaatgggtaaaatttaggtcttgttctt-tgtgagctcttaagctaatttattgtaacccatttgtatcacttttatcttagtggattggagagctgct 149  Q
    |||||||||| || ||||||||||||||| ||  ||||  ||||||||||| ||||||| | |||||| |||||| ||| ||||||||| ||||| ||||    
T  3796469 aaaatgggtagaaattaggtcttgttcttgtgcaagcttgtaagctaatttcttgtaactcttttgtaacactttcatcatagtggattagagagttgct 3796568  T
Q  150 ctctcc 155  Q
    ||||||    
T  3796569 ctctcc 3796574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 9 - 144
Target Start/End: Complemental strand, 39593915 - 39593781
Alignment:
Q  9 agtgttttctcttaggattcatagtgattgtgagtgacttgaaaaatgggtaaaatttaggtcttgttctttgtgagctcttaagctaatttattgtaac 108  Q
    |||| ||||||||||||||||| |||  | |||||||||||| ||| ||||| || |||||| |  ||||||||||| |  ||| ||||||| |||||||    
T  39593915 agtggtttctcttaggattcattgtgggtttgagtgacttgacaaaggggtagaaattaggt-tgattctttgtgagtttgtaaactaatttcttgtaac 39593817  T
Q  109 ccatttgtatcacttttatcttagtggattggagag 144  Q
      |||||||||||| ||||| ||||| | |||||||    
T  39593816 ttatttgtatcactcttatcatagtgaagtggagag 39593781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 113 - 218
Target Start/End: Original strand, 5269204 - 5269310
Alignment:
Q  113 ttgtatcacttttatcttagtggattggagagctgctctct-ccagagagtatgtcatattggaccaaactaggttaccaatcttggtatgtttgtttca 211  Q
    ||||| |||||| ||| ||||||||||||| |||||||||| ||  ||| || ||||||||||||| |||||||| | |||||||| | |||||||| |     
T  5269204 ttgtaacactttcatcatagtggattggagggctgctctctcccccagattaggtcatattggaccgaactaggtcaacaatcttgttgtgtttgttcct 5269303  T
Q  212 ttctttc 218  Q
    |||||||    
T  5269304 ttctttc 5269310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 52 - 196
Target Start/End: Original strand, 5396623 - 5396768
Alignment:
Q  52 aaatgggtaaaatttaggtcttgttctt-tgtgagctcttaagctaatttattgtaacccatttgtatcacttttatcttagtggattggagagctgctc 150  Q
    ||||||||| || ||||||||||||||| ||| ||||   |||||| ||| ||||||| | |||| | |||||| ||| |||||||||||||||||||||    
T  5396623 aaatgggtagaaattaggtcttgttcttgtgtaagcttgcaagctattttcttgtaactc-tttgcaacactttcatcatagtggattggagagctgctc 5396721  T
Q  151 tctcc-agagagtatgtcatattggaccaaactaggttaccaatctt 196  Q
    |||||   ||| || ||||||||||||| |||| ||| | |||||||    
T  5396722 tctcctccagattaggtcatattggaccgaactgggtcaacaatctt 5396768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 42 - 154
Target Start/End: Original strand, 8114680 - 8114791
Alignment:
Q  42 gtgacttgaaaaatgggtaaaatttaggtcttgttctttgtgagctcttaagctaatttattgtaacccatttgtatcacttttatcttagtggattgga 141  Q
    |||||||||||||||| || || |||||  |||||||||||||| |  |||| | |||| |||||||| |||| ||||| | ||||| ||||||||||||    
T  8114680 gtgacttgaaaaatggatacaaattagggtttgttctttgtgagattataag-tgatttcttgtaacctatttatatcattcttatcatagtggattgga 8114778  T
Q  142 gagctgctctctc 154  Q
    ||| || ||||||    
T  8114779 gagttgttctctc 8114791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 153
Target Start/End: Original strand, 873428 - 873571
Alignment:
Q  10 gtgttttctcttaggattcatagtgattgtgagtgacttgaaaaatgggtaaaatttaggtcttgttctttgtgagctcttaagctaatttattgtaacc 109  Q
    ||||||||||||| || | |  |||| |||| |||||| |||| ||| ||| || |||||  ||||| |||| ||||| ||||| |||||| ||||||||    
T  873428 gtgttttctcttaagacttaatgtgactgtgggtgactcgaaatatgagtagaaattaggatttgttatttgcgagcttttaagttaatttcttgtaacc 873527  T
Q  110 catttgtatcacttttatcttagtggattggagagctgctctct 153  Q
     ||| |||||| | | ||| |||||||| |||||| ||||||||    
T  873528 tattggtatcattctaatcatagtggatcggagagttgctctct 873571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 218
Target Start/End: Complemental strand, 5143344 - 5143237
Alignment:
Q  112 tttgtatcacttttatcttagtggattggagagctgctctct-ccagagagtatgtcatattggaccaaactaggttaccaatcttggtatgtttgtttc 210  Q
    |||||| |||||| ||| |||||| ||||||||||||||||| ||  ||| || ||||||||||||| |||||||| | ||||||  || |||||||| |    
T  5143344 tttgtaacactttcatcatagtgggttggagagctgctctctcccccagattaggtcatattggaccgaactaggtcaacaatctcagtgtgtttgttcc 5143245  T
Q  211 attctttc 218  Q
     |||||||    
T  5143244 tttctttc 5143237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 49 - 124
Target Start/End: Original strand, 5871832 - 5871908
Alignment:
Q  49 gaaaaatgggtaaaatttaggtcttgttctttgtgagctc--ttaagctaatttattgtaacccatttgtatcacttt 124  Q
    |||||||||||| || |||||| ||||||||||||||||   |||||| ||||| ||||||||||||| |||||||||    
T  5871832 gaaaaatgggtagaaattaggt-ttgttctttgtgagcttgtttaagcaaatttcttgtaacccatttttatcacttt 5871908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 218
Target Start/End: Complemental strand, 3777695 - 3777527
Alignment:
Q  51 aaaatgggtaaaatttaggtcttgttctt-tgtgagctcttaagctaatttattgtaacccatttgtatcacttttatcttagtggattggagagctgct 149  Q
    |||||||||| || |||| |||||||||| ||| || |   |||||| ||| ||||||| | |||||| |||||| ||| ||||||||||||||||| ||    
T  3777695 aaaatgggtagaaattagatcttgttcttgtgtaagtttgcaagctattttcttgtaactc-tttgtaacactttcatcatagtggattggagagctact 3777597  T
Q  150 ctctcc-agagagtatgtcatattggaccaaactaggttaccaatcttggtatgtttgtttcattctttc 218  Q
    ||||||   ||| || || |||||||||| |||| ||| | |||||| ||| |||||||| | |||||||    
T  3777596 ctctcctctagattaggttatattggaccgaactgggtcaacaatctcggtgtgtttgttcctttctttc 3777527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 72 - 125
Target Start/End: Original strand, 51337100 - 51337153
Alignment:
Q  72 ttgttctttgtgagctcttaagctaatttattgtaacccatttgtatcactttt 125  Q
    |||||||||||||||| ||||| ||||||||| |||||| |||||||| |||||    
T  51337100 ttgttctttgtgagcttttaagataatttattataacccttttgtatctctttt 51337153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 124
Target Start/End: Original strand, 379394 - 379468
Alignment:
Q  51 aaaatgggtaaaatttaggtcttgttctttgtgagctctt--aagctaatttattgtaacccatttgtatcacttt 124  Q
    |||||||||| || |||||| ||||||||||||||||  |  |||||||||| |||||||||||||||||| ||||    
T  379394 aaaatgggtagaaattaggt-ttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatcgcttt 379468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 124
Target Start/End: Original strand, 12073406 - 12073480
Alignment:
Q  51 aaaatgggtaaaatttaggtcttgttctttgtgagctctt--aagctaatttattgtaacccatttgtatcacttt 124  Q
    |||||||||| || |||||| ||||||||||||||||  |  |||||||||||||||||| |||||||||| ||||    
T  12073406 aaaatgggtagaaattaggt-ttgttctttgtgagcttgttgaagctaatttattgtaactcatttgtatctcttt 12073480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 124
Target Start/End: Complemental strand, 52467508 - 52467434
Alignment:
Q  51 aaaatgggtaaaatttaggtcttgttctttgtgagctctt--aagctaatttattgtaacccatttgtatcacttt 124  Q
    |||||||||| || |||||| ||||||||||||||||  |  |||||||| | |||||||||||||||||||||||    
T  52467508 aaaatgggtagaaattaggt-ttgttctttgtgagcttgttgaagctaatatcttgtaacccatttgtatcacttt 52467434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 155
Target Start/End: Original strand, 28468542 - 28468584
Alignment:
Q  113 ttgtatcacttttatcttagtggattggagagctgctctctcc 155  Q
    ||||| |||||| ||| ||||||||||||||||||||||||||    
T  28468542 ttgtaacactttcatcatagtggattggagagctgctctctcc 28468584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 114
Target Start/End: Original strand, 41964429 - 41964493
Alignment:
Q  51 aaaatgggtaaaatttaggtcttgttctttgtgagctc--ttaagctaatttattgtaacccattt 114  Q
    |||||||||| || |||||  ||||||||||||||||   ||||||||||||||||||||||||||    
T  41964429 aaaatgggtagaaattaggg-ttgttctttgtgagcttgtttaagctaatttattgtaacccattt 41964493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 72 - 149
Target Start/End: Complemental strand, 4956304 - 4956227
Alignment:
Q  72 ttgttctttgtgagctcttaagctaatttattgtaacccatttgtatcacttttatcttagtggattggagagctgct 149  Q
    ||||||||| |||| | || ||||||||| ||||||||  ||| ||||| | ||||| ||||||||||||||| ||||    
T  4956304 ttgttctttatgagttttttagctaatttcttgtaacctctttttatcattcttatcatagtggattggagagttgct 4956227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 155
Target Start/End: Complemental strand, 24742034 - 24741982
Alignment:
Q  102 ttgtaacccatttgtatcacttttatcttagtggattggagagctgctctctcc 155  Q
    ||||||||| |||||| |||||| ||| || |||||||||||||||||||||||    
T  24742034 ttgtaaccc-tttgtaacactttcatcatattggattggagagctgctctctcc 24741982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 155
Target Start/End: Complemental strand, 29760735 - 29760683
Alignment:
Q  102 ttgtaacccatttgtatcacttttatcttagtggattggagagctgctctctcc 155  Q
    ||||||||| |||||| |||||| ||| || |||||||||||||||||||||||    
T  29760735 ttgtaaccc-tttgtaacactttcatcatattggattggagagctgctctctcc 29760683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 87; Significance: 8e-42; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 37 - 155
Target Start/End: Original strand, 4386854 - 4386972
Alignment:
Q  37 tgtgagtgacttgaaaaatgggtaaaatttaggtcttgttctttgtgagctcttaagctaatttattgtaacccatttgtatcacttttatcttagtgga 136  Q
    |||| ||||||||||||||| ||| || |||||| |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| ||||    
T  4386854 tgtgggtgacttgaaaaatgagtagaaattaggttttgttctttgtgagcttttaagctaatttcttgtaacccatttgtatcacttttatcttattgga 4386953  T
Q  137 ttggagagctgctctctcc 155  Q
    |||||||||||||||||||    
T  4386954 ttggagagctgctctctcc 4386972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 5 - 155
Target Start/End: Complemental strand, 21353754 - 21353604
Alignment:
Q  5 ctttagtgttttctcttaggattcatagtgattgtgagtgacttgaaaaatgggtaaaatttaggtcttgttctttgtgagctcttaagctaatttattg 104  Q
    |||||||||||||||||| ||||||| || | |||||||| | ||||||||||||| || ||||||  ||||||||||||||||||  |||||||| |||    
T  21353754 ctttagtgttttctcttaagattcattgtaagtgtgagtggcatgaaaaatgggtagaaattaggttgtgttctttgtgagctcttgtgctaatttcttg 21353655  T
Q  105 taacccatttgtatcacttttatcttagtggattggagagctgctctctcc 155  Q
    |||| ||||||||||||||| ||||||||||||||||||| ||||||||||    
T  21353654 taactcatttgtatcactttcatcttagtggattggagaggtgctctctcc 21353604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 5 - 218
Target Start/End: Original strand, 18552779 - 18552992
Alignment:
Q  5 ctttagtgttttctcttaggattcatagtgattgtgagtgacttgaaaaatgggtaaaatttaggtcttgttctt-tgtgagctcttaagctaatttatt 103  Q
    |||| ||||||||||||||||||||| | || |||| |||||    |||||||||| || ||||||||||||||| ||| ||||  ||||||||||| ||    
T  18552779 cttttgtgttttctcttaggattcattgagagtgtgggtgacac--aaaatgggtagaaattaggtcttgttcttgtgtaagcttataagctaatttctt 18552876  T
Q  104 gtaacccatttgtatcacttttatcttagtggattggagagctgctctct-ccagagagtatgtcatattggaccaaactaggttaccaatcttggtatg 202  Q
    ||||| | |||||| |||||| ||| ||||||||||||| |||||||||| ||  ||| || ||||||||||||| |||| ||| | |||||||||| |     
T  18552877 gtaactcttttgtaacactttcatcatagtggattggagggctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatcttggtgta 18552976  T
Q  203 tttgtttcattctttc 218  Q
    |||||| | |||||||    
T  18552977 tttgttcctttctttc 18552992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 11 - 208
Target Start/End: Complemental strand, 25795966 - 25795768
Alignment:
Q  11 tgttttctcttaggattcatagtgattgtgagtgacttgaaaaatgggtaaaatttaggtcttgttcttt-gtgagctcttaagctaatttattgtaacc 109  Q
    |||||||||||||||||||| | || |||| |||||    |||||||||| || |||||||||||||||| || ||||  ||||||||||| |||||||     
T  25795966 tgttttctcttaggattcattgagagtgtgggtgacac--aaaatgggtagaaattaggtcttgttcttttgtaagcttataagctaatttcttgtaact 25795869  T
Q  110 catttgtatcacttttatcttagtggattggagagctgctctct-ccagagagtatgtcatattggaccaaactaggttaccaatc-ttggtatgtttgt 207  Q
    | || ||| |||||| |||||||| ||||||||||||||||||| ||  ||| || ||||||||||||| |||||||| | ||||| ||||| |||||||    
T  25795868 ctttcgtaacactttcatcttagtagattggagagctgctctctcccccagattaggtcatattggaccgaactaggtcaacaatctttggtgtgtttgt 25795769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 2 - 208
Target Start/End: Original strand, 1417382 - 1417589
Alignment:
Q  2 tttctttagtgttttctcttaggattcatagtgattgtgagtgacttgaaaaatgggtaaaatttaggtcttgttc-tttgtgagctcttaagctaattt 100  Q
    ||||||| ||||||||||||||||||||| | || |||| ||||  ||||||||||||| || ||||| ||||||| ||||| || |  |||||||||||    
T  1417382 tttcttttgtgttttctcttaggattcattgggagtgtgggtgatatgaaaaatgggtagaaattaggacttgttcttttgtaagtttataagctaattt 1417481  T
Q  101 attgtaacccatttgtatcacttttatcttagtggattggagagctgctctct-ccagagagtatgtcatattggaccaaactaggttaccaatcttggt 199  Q
     || |||| || ||||| ||||||  |||||||||||||||| | |||||||| ||  ||| || ||||||||||||| |||| ||| | ||||||||||    
T  1417482 cttataactca-ttgtaacactttcttcttagtggattggagggatgctctctcccccagattaggtcatattggaccgaactgggtcaacaatcttggt 1417580  T
Q  200 atgtttgtt 208  Q
     ||||||||    
T  1417581 gtgtttgtt 1417589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 5 - 182
Target Start/End: Complemental strand, 40844842 - 40844666
Alignment:
Q  5 ctttagtgttttctcttaggattcatagtgattgtgagtgacttgaaaaatgggtaaaatttaggtcttgttctt-tgtgagctcttaagctaatttatt 103  Q
    |||| ||||||||||||||||||||| | || |||| |||||    |||||||||| || ||||||||||||||| ||| ||||  ||||||||||| ||    
T  40844842 cttttgtgttttctcttaggattcattgagagtgtgggtgacac--aaaatgggtagaaattaggtcttgttcttgtgtaagcttataagctaatttctt 40844745  T
Q  104 gtaacccatttgtatcacttttatcttagtggattggagagctgctctctccagagagtatgtcatattggaccaaact 182  Q
    ||||| | |||||| |||||| ||| ||||||||| ||| ||||||||||||  ||| || ||||||||||||| ||||    
T  40844744 gtaactcttttgtaacactttcatcatagtggatttgagggctgctctctccccagattaggtcatattggaccgaact 40844666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 208
Target Start/End: Original strand, 3328251 - 3328455
Alignment:
Q  5 ctttagtgttttctcttaggattcatagtgattgtgagtgacttgaaaaatgggtaaaatttaggtcttgttc-tttgtgagctcttaagctaatttatt 103  Q
    |||| ||||||||||||||||| ||| | || |||| ||||  ||||||||||||| || ||||| ||||||| ||||| ||||  ||||||||||| ||    
T  3328251 cttttgtgttttctcttaggatacattgagagtgtgggtgatatgaaaaatgggtagaaattaggacttgttcttttgtaagcttataagctaatttctt 3328350  T
Q  104 gtaacccatttgtatcacttttatcttagtggattggagagctgctctctcc-agagagtatgtcatattggaccaaactaggttaccaatcttggtatg 202  Q
    ||||| || ||||| |||||| |||||||||||||| || ||||||||||||   ||| || |||||||||||   |||| ||| | |||||||||| ||    
T  3328351 gtaactca-ttgtaacactttcatcttagtggattgaagggctgctctctcctctagattaggtcatattggaatgaactgggtcaacaatcttggtgtg 3328449  T
Q  203 tttgtt 208  Q
    ||||||    
T  3328450 tttgtt 3328455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 3715892 - 3716101
Alignment:
Q  1 ctttctttagtgttttctcttaggattcata--gtgattgtgagtgacttgaaaaatgggtaaaatttaggtcttgttctt-tgtgagctcttaagctaa 97  Q
    |||||||| ||||||||||||||||||||||  ||||  ||| |||||    |||||||||| || ||| ||||||||||| ||| || |  ||||||||    
T  3715892 ctttcttttgtgttttctcttaggattcatattgtgaaagtgggtgacac--aaaatgggtagaaattaagtcttgttcttgtgtaagtttgtaagctaa 3715989  T
Q  98 tttattgtaacccatttgtatcacttttatcttagtggattggagagctgctctctc-cagagagtatgtcatattggaccaaactaggttaccaatctt 196  Q
    ||| ||||||| | |||||| |||||| ||| |||| |||||||||||||||||||| |  ||| || ||||||||||||| |||| ||| | |||||||    
T  3715990 tttcttgtaactcttttgtaacactttcatcatagtagattggagagctgctctctctcctagattaggtcatattggaccgaactgggtcaacaatctt 3716089  T
Q  197 ggtatgtttgtt 208  Q
    ||| ||||||||    
T  3716090 ggtgtgtttgtt 3716101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 52 - 218
Target Start/End: Complemental strand, 21711368 - 21711201
Alignment:
Q  52 aaatgggtaaaatttaggtcttgttctt-tgtgagctcttaagctaatttattgtaacccatttgtatcacttttatcttagtggattggagagctgctc 150  Q
    ||||||||| || |||||||||| |||| ||| |||| |||||||||||| ||||||| | |||||| |||||| ||| ||||||||| |||||||||||    
T  21711368 aaatgggtagaaattaggtcttgctcttgtgtaagcttttaagctaatttcttgtaactc-tttgtaacactttcatcatagtggatttgagagctgctc 21711270  T
Q  151 tct-ccagagagtatgtcatattggaccaaactaggttaccaatcttggtatgtttgtttcattctttc 218  Q
    ||| ||  ||| || ||||||||||||| |||| ||| | |||||||||| |||||||| | |||||||    
T  21711269 tctcccccagattaggtcatattggaccgaactgggtcaacaatcttggtgtgtttgttcctttctttc 21711201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 5 - 218
Target Start/End: Original strand, 8370382 - 8370597
Alignment:
Q  5 ctttagtgttttctcttaggattcata--gtgattgtgagtgacttgaaaaatgggtaaaatttaggtcttgttctt-tgtgagctcttaagctaattta 101  Q
    |||| ||||||||||||||||||||||  ||||  ||| |||||   | ||||||||| || ||| ||||||||||| ||| |||| ||||||||||||     
T  8370382 cttttgtgttttctcttaggattcatattgtgagagtgggtgac---acaaatgggtagaaattatgtcttgttcttgtgtaagcttttaagctaatttc 8370478  T
Q  102 ttgtaacccatttgtatcacttttatcttagtggattggagagctgctctct-ccagagagtatgtcatattggaccaaactaggttaccaatc--ttgg 198  Q
    ||||||| | |||||| |||||| ||| |||||||||||||||||||||||| ||  ||| || ||||||||||||| |||| ||| | |||||  ||||    
T  8370479 ttgtaactc-tttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatcttttgg 8370577  T
Q  199 tatgtttgtttcattctttc 218  Q
    | |||||||| | |||||||    
T  8370578 tgtgtttgttcctttctttc 8370597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 102 - 209
Target Start/End: Original strand, 25929435 - 25929541
Alignment:
Q  102 ttgtaacccatttgtatcacttttatcttagtggattggagagctgctctctccagagagtatgtcatattggaccaaactaggttaccaatcttggtat 201  Q
    ||||||| ||||||||||||||| ||||||||||||||||| ||||||||| ||  |||||| ||| ||||||||| |||| ||||||| |||||||| |    
T  25929435 ttgtaactcatttgtatcactttcatcttagtggattggagggctgctctccccccagagtaggtcgtattggaccgaactgggttacc-atcttggtgt 25929533  T
Q  202 gtttgttt 209  Q
    ||||||||    
T  25929534 gtttgttt 25929541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 51 - 208
Target Start/End: Complemental strand, 48438361 - 48438202
Alignment:
Q  51 aaaatgggtaaaatttaggtcttgttctt-tgtgagctcttaagctaatttattgtaacccatttgtatcacttttatcttagtggattggagagctgct 149  Q
    |||||||||| || ||||||||||||||| ||| ||||  || |||||||| ||||||| | |||||| |||||| ||| ||||||||||||| ||||||    
T  48438361 aaaatgggtagaaattaggtcttgttcttgtgtaagcttatatgctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgct 48438262  T
Q  150 ctct-ccagagagtatgtcatattggaccaaactaggttaccaatcttggtatgtttgtt 208  Q
    |||| ||  ||| || ||||||||||||| |||||||| |  ||||||||| ||||||||    
T  48438261 ctctcccccagattaggtcatattggaccgaactaggtcaataatcttggtgtgtttgtt 48438202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 208
Target Start/End: Original strand, 24695060 - 24695263
Alignment:
Q  5 ctttagtgttttctcttaggattcatagtgattgtgagtgacttgaaaaatgggtaaaatttaggtcttgttcttt-gtgagctcttaagctaatttatt 103  Q
    |||| ||||||||| ||||||||||| | || |||| |||||    |||||||||| || |||||||||||||||| || || |  ||||||||||| ||    
T  24695060 cttttgtgttttcttttaggattcattgagagtgtgggtgacac--aaaatgggtagaaattaggtcttgttcttttgtaagtttataagctaatttctt 24695157  T
Q  104 gtaacccatttgtatcacttttatcttagtggattggagagctgctctctccag-agagtatgtcatattggaccaaactaggttaccaatcttggtatg 202  Q
    ||||| | |||||| |||||| ||| ||| ||||| ||| | |||||||||| | ||| || ||||||||||||| |||||||| | |||||||||| ||    
T  24695158 gtaactcttttgtaacactttcatcatagcggattagagggttgctctctcccgtagattaggtcatattggaccgaactaggtcaacaatcttggtgtg 24695257  T
Q  203 tttgtt 208  Q
    ||||||    
T  24695258 tttgtt 24695263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 51 - 218
Target Start/End: Original strand, 1736245 - 1736414
Alignment:
Q  51 aaaatgggtaaaatttaggtcttgttctt-tgtgagctcttaagctaatttattgtaacccatttgtatcacttttatcttagtggattggagagctgct 149  Q
    |||||||||| || ||||||||||||||| ||| ||||  |||| |||||| ||||||| | |||||| |||||| ||| ||||||||||||| ||||||    
T  1736245 aaaatgggtagaaattaggtcttgttcttgtgtaagcttataagttaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgct 1736344  T
Q  150 ctct-ccagagagtatgtcatattggaccaaactaggttaccaatcttggtatgtttgtttcattctttc 218  Q
    |||| ||  ||| || ||||||||||||| |||| ||| | |||| ||||| |||||||| | |||||||    
T  1736345 ctctcccccagattaggtcatattggaccgaactgggtcaacaatattggtgtgtttgttcctttctttc 1736414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 10 - 208
Target Start/End: Complemental strand, 26299174 - 26298976
Alignment:
Q  10 gtgttttctcttaggattcatagtgattgtgagtgacttgaaaaatgggtaaaatttaggtcttgttctt-tgtgagctcttaagctaatttattgtaac 108  Q
    |||||||||||||||||| || | ||||||| |||||    |||||||||| || ||||||||||||||| | | || |  ||||||||||| |||||||    
T  26299174 gtgttttctcttaggattaattgagattgtgggtgacac--aaaatgggtagaaattaggtcttgttcttgtctaagtttataagctaatttcttgtaac 26299077  T
Q  109 ccatttgtatcacttttatcttagtggattggagagctgctctct-ccagagagtatgtcatattggaccaaactaggttaccaatcttggtatgtttgt 207  Q
     | |||||| |||||| ||| |||| |||||||| |||||||||| ||  ||| |||||||||||| ||| |||| ||| | |||||||||| |||||||    
T  26299076 tcttttgtaacactttcatcatagtagattggagggctgctctctcccccagattatgtcatattgaaccgaactgggtcaacaatcttggtgtgtttgt 26298977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 208
Target Start/End: Original strand, 40592676 - 40592881
Alignment:
Q  5 ctttagtgttttctcttaggattcata--gtgattgtgagtgacttgaaaaatgggtaaaatttaggtcttgttctt-tgtgagctcttaagctaattta 101  Q
    |||| ||||||||||||||||||||||  ||||  ||| |||||    |||||||||| || |||| | |||||||| ||| ||||  |||||||||||     
T  40592676 cttttgtgttttctcttaggattcatattgtgagagtgggtgacac--aaaatgggtagaaattagattttgttcttgtgtaagcttgtaagctaatttc 40592773  T
Q  102 ttgtaacccatttgtatcacttttatcttagtggattggagagctgctctct-ccagagagtatgtcatattggaccaaactaggttaccaatcttggta 200  Q
    ||||||| | |||||| |||||| ||| |||| |||||||||||| |||||| ||| ||| || ||||||||||||| |||| ||| | ||||||||||     
T  40592774 ttgtaactcttttgtaacactttcatcatagtcgattggagagcttctctctcccacagattaggtcatattggaccgaactgggtcaacaatcttggtg 40592873  T
Q  201 tgtttgtt 208  Q
    ||||||||    
T  40592874 tgtttgtt 40592881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 5 - 218
Target Start/End: Complemental strand, 36029286 - 36029071
Alignment:
Q  5 ctttagtgttttctcttaggattcatagt--gattgtgagtgacttgaaaaatgggtaaaatttaggtcttgttctt-tgtgagctcttaagctaattta 101  Q
    |||| |||||||||||||||||||||| |  ||  |||||||||    |||||||||| || ||||||||||||||| ||| || |  |||||||||||     
T  36029286 cttttgtgttttctcttaggattcatattttgagagtgagtgacac--aaaatgggtagaaattaggtcttgttcttgtgtaagtttgtaagctaatttc 36029189  T
Q  102 ttgtaacccatttgtatcacttttatcttagtggattggagagctgctctct-ccagagagtatgtcatattggaccaaactaggttaccaatcttggta 200  Q
    ||||||| | |||||| |||||| ||| |||||||||||||||||||| ||| ||  ||| || ||||||||||||  |||| ||| | |||||| |||     
T  36029188 ttgtaactcttttgtaacactttcatcatagtggattggagagctgctttctcccccagattaggtcatattggacagaactgggtcaacaatctcggtg 36029089  T
Q  201 tgtttgtttcattctttc 218  Q
    |||||||| | |||||||    
T  36029088 tgtttgttcctttctttc 36029071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 42 - 153
Target Start/End: Complemental strand, 29100315 - 29100203
Alignment:
Q  42 gtgacttgaaaaatgggtaaaatttaggtcttgttctttgtgagctcttaagctaatttattgtaacccatttgtatcact-tttatcttagtggattgg 140  Q
    ||||||||||||| | ||| || |||||  |||||||||||||| | |||||||||||| || |||||  ||||||||||| |||||| ||||||| |||    
T  29100315 gtgacttgaaaaacgagtagaaattagggtttgttctttgtgagtttttaagctaatttcttataacctctttgtatcactctttatcatagtggaatgg 29100216  T
Q  141 agagctgctctct 153  Q
    |||||||||||||    
T  29100215 agagctgctctct 29100203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 154
Target Start/End: Original strand, 3323585 - 3323734
Alignment:
Q  5 ctttagtgttttctcttaggattcatagtgattgtgagtgacttgaaaaatgggtaaaatttaggtcttgttcttt-gtgagctcttaagctaatttatt 103  Q
    |||| |||||||||||||| |||||| | || |||| ||||  |||| |||||||| || ||| | |||||||||| || ||||  ||||||||||| ||    
T  3323585 cttttgtgttttctcttagaattcattgagagtgtgggtgatatgaacaatgggtagaaattatgacttgttcttttgtaagcttataagctaatttctt 3323684  T
Q  104 gtaacccatttgtatcacttttatcttagtggattggagagctgctctctc 154  Q
    ||||| |||| ||| |||||| ||||||||||||||||| |||| ||||||    
T  3323685 gtaactcatt-gtaacactttcatcttagtggattggagggctgttctctc 3323734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 38 - 208
Target Start/End: Complemental strand, 37466450 - 37466279
Alignment:
Q  38 gtgagtgacttgaaaaatgggtaaaatttaggtcttgttcttt-gtgagctcttaagctaatttattgtaacccatttgtatcacttttatcttagtgga 136  Q
    ||||||||  ||||||||||||| || ||||| |||||||||| || ||||  |||  |||||| ||||||| |||| ||| |||||| |||||||||||    
T  37466450 gtgagtgatatgaaaaatgggtagaaattaggacttgttcttttgtaagcttataaattaatttcttgtaactcatt-gtaacactttcatcttagtgga 37466352  T
Q  137 ttggagagctgctctct-ccagagagtatgtcatattggaccaaactaggttaccaatcttggtatgtttgtt 208  Q
    |||||| ||| |||||| ||  ||| || ||||||||||||| ||||  || | |||||||||| ||||||||    
T  37466351 ttggagggctactctctcccccagattaggtcatattggaccgaactgtgtcaacaatcttggtgtgtttgtt 37466279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 52 - 196
Target Start/End: Complemental strand, 32143467 - 32143321
Alignment:
Q  52 aaatgggtaaaatttaggtcttgttctt-tgtgagctcttaagctaattta-ttgtaacccatttgtatcacttttatcttagtggattggagagctgct 149  Q
    ||||||||| ||| |||||||||||||| ||| ||||   |||||| |||  ||||||||| |||||| |||||| ||| ||||||||||||||||||||    
T  32143467 aaatgggtagaatctaggtcttgttcttgtgtaagcttgcaagctatttttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgct 32143369  T
Q  150 ctct-ccagagagtatgtcatattggaccaaactaggttaccaatctt 196  Q
    |||| ||  ||| || ||||||||||||| |||||||| | |||||||    
T  32143368 ctctcccccagattaggtcatattggaccgaactaggtcaacaatctt 32143321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 54 - 218
Target Start/End: Original strand, 30709733 - 30709901
Alignment:
Q  54 atgggtaaaatttaggtcttgttctt-tgtgagctcttaagctaatttattgtaacccatttgtatcacttttatcttagtggattggagagctgctctc 152  Q
    ||||||| || |||||||||| |||| ||| ||||  ||||||||||| ||||||| | |||||| || ||| ||| ||||||||||||| |||||||||    
T  30709733 atgggtagaaattaggtcttgctcttgtgtaagcttataagctaatttcttgtaactcttttgtaacaatttcatcatagtggattggagggctgctctc 30709832  T
Q  153 t-ccagagagtatgtcatattggaccaaactaggttaccaatc--ttggtatgtttgtttcattctttc 218  Q
    | ||  ||| || ||||||||||||| |||| ||| | |||||  ||||| |||||||| | |||||||    
T  30709833 tcccccagattaggtcatattggaccgaactgggtcaacaatcttttggtgtgtttgttcctttctttc 30709901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 51 - 208
Target Start/End: Original strand, 47923845 - 47924005
Alignment:
Q  51 aaaatgggtaaaatttaggtcttgttctttgtg--agctcttaagctaatttattgtaacccatttgtatcacttttatcttagtggattggagagctgc 148  Q
    |||||||||| || |||||| ||| ||||||||  | || |||||||||||| ||||||| | |||||| |||||| ||| |||| ||||| || |||||    
T  47923845 aaaatgggtataaattaggttttgctctttgtgtaaacttttaagctaatttcttgtaactcttttgtagcactttcatcatagtagattgaagggctgc 47923944  T
Q  149 tctct-ccagagagtatgtcatattggaccaaactaggttaccaatcttggtatgtttgtt 208  Q
    ||||| ||  ||| || ||||||||||| | |||| ||| | |||||||||| ||||||||    
T  47923945 tctctcccctagattaggtcatattggatcgaactgggtcaacaatcttggtgtgtttgtt 47924005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 91 - 196
Target Start/End: Complemental strand, 16264455 - 16264350
Alignment:
Q  91 aagctaatttattgtaacccatttgtatcacttttatcttagtggattggagagctgctctct-ccagagagtatgtcatattggaccaaactaggttac 189  Q
    |||||| ||| ||||||| | |||||| |||||| ||| |||||||||||||||||||||||| ||  ||| || ||||||||||||| |||||||| |     
T  16264455 aagctattttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactaggtcaa 16264357  T
Q  190 caatctt 196  Q
    |||||||    
T  16264356 caatctt 16264350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 113 - 235
Target Start/End: Original strand, 27986449 - 27986573
Alignment:
Q  113 ttgtatcacttttatcttagtggattggagagctgctctct-ccagagagtatgtcatattggaccaaactaggttaccaatc--ttggtatgtttgttt 209  Q
    ||||| |||||| ||| |||||||||||||||||||||||| ||  ||| || ||||||||||||| |||| ||| | |||||  ||||| |||||| ||    
T  27986449 ttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatcttttggtgtgtttg-tt 27986547  T
Q  210 cattctttctggcttatatttgttgc 235  Q
    |||||||||| |||||| ||| ||||    
T  27986548 cattctttcttgcttatctttattgc 27986573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 52 - 218
Target Start/End: Original strand, 6794654 - 6794822
Alignment:
Q  52 aaatgggtaaaatttaggtcttgttctt-tgtgagctcttaagctaattta-ttgtaacccatttgtatcacttttatcttagtggattggagagctgct 149  Q
    ||||||||| || ||||| ||||||||| ||| ||||   ||||||||||  ||||||| | |||||| |||||| ||| ||||||||||||||||||||    
T  6794654 aaatgggtagaaattaggacttgttcttgtgtaagcttgcaagctaattttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgct 6794752  T
Q  150 ctct-ccagagagtatgtcatattggaccaaactaggttaccaatcttggtatgtttgtttcattctttc 218  Q
    |||| ||  | | || ||||||||||||| |||  ||| | |||||||||| |||||||| | |||||||    
T  6794753 ctctcccccatattaggtcatattggacctaaccgggtcaacaatcttggtgtgtttgttcctttctttc 6794822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 142
Target Start/End: Complemental strand, 8126817 - 8126685
Alignment:
Q  10 gtgttttctcttaggattcatagtgattgtgagtgacttgaaaaatgggtaaaatttaggtcttgttcttt-gtgagctcttaagctaatttattgtaac 108  Q
    ||||||||||||| ||||||| | || |||| |||||   ||||||||||| || ||| || ||||||||| || ||||  ||||||||||| |||||||    
T  8126817 gtgttttctcttaagattcattgagagtgtgggtgacac-aaaaatgggtagaaattaagtattgttcttttgtaagcttataagctaatttcttgtaac 8126719  T
Q  109 ccatttgtatcacttttatcttagtggattggag 142  Q
     | |||||| |||||| ||| |||||||||||||    
T  8126718 tcttttgtaacactttcatcgtagtggattggag 8126685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 51 - 124
Target Start/End: Original strand, 760861 - 760935
Alignment:
Q  51 aaaatgggtaaaatttaggtcttgttctttgtgagctc--ttaagctaatttattgtaacccatttgtatcacttt 124  Q
    |||||||||| || |||||||| ||||||||||||||   |||||||||||| |||||||||||||||||| ||||    
T  760861 aaaatgggtagaaattaggtct-gttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatcccttt 760935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 51 - 124
Target Start/End: Complemental strand, 22835156 - 22835082
Alignment:
Q  51 aaaatgggtaaaatttaggtcttgttctttgtgagctc--ttaagctaatttattgtaacccatttgtatcacttt 124  Q
    |||||||||| || |||||| ||||||||||||||||   |||||||||||| |||||||||||||||||| ||||    
T  22835156 aaaatgggtagaaattaggt-ttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatcccttt 22835082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 52 - 196
Target Start/End: Original strand, 27974893 - 27975039
Alignment:
Q  52 aaatgggtaaaatttaggtcttgttctt-tgtgagctcttaagctaattta-ttgtaacccatttgtatcacttttatcttagtggattggagagctgct 149  Q
    ||||||||| || ||||||||||||||| ||| ||||   |||||| |||  ||||||| | |||||| |||||| ||| ||||||||||||||||||||    
T  27974893 aaatgggtagaaattaggtcttgttcttgtgtaagcttgcaagctatttttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgct 27974991  T
Q  150 ctct-ccagagagtatgtcatattggaccaaactaggttaccaatctt 196  Q
    |||| ||  ||| || ||||||||||||| |||| ||| | |||||||    
T  27974992 ctctcccccagattaggtcatattggaccgaactgggtcaacaatctt 27975039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 137
Target Start/End: Original strand, 5366218 - 5366351
Alignment:
Q  5 ctttagtgttttctcttaggattcatag-tgattgtgagtgacttgaaaaatgggtaaaatttaggtcttgttctttgtgagctcttaagctaatttatt 103  Q
    ||||||||||||| ||||||||||||   | | |||| |||||| |||||| ||||| || ||| |  || ||| ||||||| | ||||| |||||| ||    
T  5366218 ctttagtgttttcgcttaggattcatttattagtgtgggtgactagaaaaaagggtagaaattaagattttttcattgtgagattttaagataatttctt 5366317  T
Q  104 gtaacccatttgtatcacttttatcttagtggat 137  Q
    ||||||  ||||||||||||| ||| ||||||||    
T  5366318 gtaacctctttgtatcactttcatcatagtggat 5366351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 109
Target Start/End: Complemental strand, 25517147 - 25517070
Alignment:
Q  32 gtgattgtgagtgacttgaaaaatgggtaaaatttaggtcttgttctttgtgagctcttaagctaatttattgtaacc 109  Q
    |||| |||| ||||||||||||||  ||| || |||||  |||||||||||||||| |||||||||||| || |||||    
T  25517147 gtgagtgtgggtgacttgaaaaataagtagaaattagggtttgttctttgtgagcttttaagctaatttcttataacc 25517070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 102 - 143
Target Start/End: Original strand, 25929365 - 25929406
Alignment:
Q  102 ttgtaacccatttgtatcacttttatcttagtggattggaga 143  Q
    ||||||| ||||||||||||||| ||||||||||||||||||    
T  25929365 ttgtaactcatttgtatcactttcatcttagtggattggaga 25929406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 102 - 155
Target Start/End: Complemental strand, 27453052 - 27453000
Alignment:
Q  102 ttgtaacccatttgtatcacttttatcttagtggattggagagctgctctctcc 155  Q
    ||||||||| |||||| |||||| ||| ||||||||||||||||||||||||||    
T  27453052 ttgtaaccc-tttgtaacactttcatcatagtggattggagagctgctctctcc 27453000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 124
Target Start/End: Original strand, 46860488 - 46860562
Alignment:
Q  51 aaaatgggtaaaatttaggtcttgttctttgtgagctctt--aagctaatttattgtaacccatttgtatcacttt 124  Q
    |||||||||| || |||||| ||||||||||||||||  |  |||||||||| |||||||||||||||||| ||||    
T  46860488 aaaatgggtagaaattaggt-ttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt 46860562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 124
Target Start/End: Original strand, 9581297 - 9581370
Alignment:
Q  52 aaatgggtaaaatttaggtcttgttctttgtgagctc--ttaagctaatttattgtaacccatttgtatcacttt 124  Q
    ||||||||| || |||||| ||||||||||||||||   |||||||||||| || ||||||||||||||| ||||    
T  9581297 aaatgggtagaaattaggt-ttgttctttgtgagcttgtttaagctaatttcttttaacccatttgtatcccttt 9581370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 72 - 124
Target Start/End: Complemental strand, 23392043 - 23391989
Alignment:
Q  72 ttgttctttgtgagctc--ttaagctaatttattgtaacccatttgtatcacttt 124  Q
    ||||||||||||||||   ||||| |||||| |||||||||||||||||||||||    
T  23392043 ttgttctttgtgagcttgtttaagataatttcttgtaacccatttgtatcacttt 23391989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 155
Target Start/End: Original strand, 26928541 - 26928646
Alignment:
Q  52 aaatgggtaaaatttaggtcttgttctt-tgtgagctcttaagctaatttat--tgtaacccatttgtatcacttttatcttagtggattggagagctgc 148  Q
    ||||||||| ||| |||||||||||||| ||| ||||   |||||| ||| |  |||||||| |||||| |||||| ||| ||||||||||||||| |||    
T  26928541 aaatgggtagaatctaggtcttgttcttgtgtaagcttgcaagctattttttcttgtaaccc-tttgtaacactttcatcatagtggattggagagttgc 26928639  T
Q  149 tctctcc 155  Q
    |||||||    
T  26928640 tctctcc 26928646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 72 - 124
Target Start/End: Complemental strand, 32744570 - 32744516
Alignment:
Q  72 ttgttctttgtgagctc--ttaagctaatttattgtaacccatttgtatcacttt 124  Q
    ||||||||||||||||   |||||||||||| ||||||| |||||||||||||||    
T  32744570 ttgttctttgtgagcttgtttaagctaatttcttgtaactcatttgtatcacttt 32744516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 72 - 124
Target Start/End: Original strand, 54593738 - 54593792
Alignment:
Q  72 ttgttctttgtgagctctt--aagctaatttattgtaacccatttgtatcacttt 124  Q
    ||||||||||||||||  |  ||||||||||||||||||||||||||||| ||||    
T  54593738 ttgttctttgtgagcttgttgaagctaatttattgtaacccatttgtatctcttt 54593792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 80
Target Start/End: Original strand, 25929296 - 25929365
Alignment:
Q  10 gtgttttctcttaggattcatagtgattgtgagtgacttgaaaaatgggtaaaatttaggtcttgttcttt 80  Q
    ||||||||||||||||||||| |||| |||| ||||| || |||||| ||| ||  |||||||||||||||    
T  25929296 gtgttttctcttaggattcattgtgagtgtgggtgacatg-aaaatgagtagaaactaggtcttgttcttt 25929365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 155
Target Start/End: Original strand, 33386669 - 33386711
Alignment:
Q  113 ttgtatcacttttatcttagtggattggagagctgctctctcc 155  Q
    ||||| |||||| ||| ||||||||||||||||||||||||||    
T  33386669 ttgtaacactttcatcatagtggattggagagctgctctctcc 33386711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 155
Target Start/End: Complemental strand, 1306042 - 1305990
Alignment:
Q  102 ttgtaacccatttgtatcacttttatcttagtggattggagagctgctctctcc 155  Q
    ||||||||| |||||| |||||| ||| |||||||||||||||||||| |||||    
T  1306042 ttgtaaccc-tttgtaacactttcatcgtagtggattggagagctgctatctcc 1305990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 155
Target Start/End: Original strand, 2671589 - 2671641
Alignment:
Q  102 ttgtaacccatttgtatcacttttatcttagtggattggagagctgctctctcc 155  Q
    ||||||||| |||||| |||||| ||| || |||||||||||||||||||||||    
T  2671589 ttgtaaccc-tttgtaacactttcatcatattggattggagagctgctctctcc 2671641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 155
Target Start/End: Complemental strand, 7167338 - 7167286
Alignment:
Q  102 ttgtaacccatttgtatcacttttatcttagtggattggagagctgctctctcc 155  Q
    ||||||||| |||||| |||||| ||| || |||||||||||||||||||||||    
T  7167338 ttgtaaccc-tttgtaacactttcatcatattggattggagagctgctctctcc 7167286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 155
Target Start/End: Complemental strand, 8477456 - 8477404
Alignment:
Q  102 ttgtaacccatttgtatcacttttatcttagtggattggagagctgctctctcc 155  Q
    ||||||||| |||||| |||||| ||| || |||||||||||||||||||||||    
T  8477456 ttgtaaccc-tttgtaacactttcatcatattggattggagagctgctctctcc 8477404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 155
Target Start/End: Original strand, 8739066 - 8739118
Alignment:
Q  102 ttgtaacccatttgtatcacttttatcttagtggattggagagctgctctctcc 155  Q
    ||||||||| |||||| |||||| ||| || |||||||||||||||||||||||    
T  8739066 ttgtaaccc-tttgtaacactttcatcatattggattggagagctgctctctcc 8739118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 155
Target Start/End: Original strand, 9091304 - 9091356
Alignment:
Q  102 ttgtaacccatttgtatcacttttatcttagtggattggagagctgctctctcc 155  Q
    ||||||||| |||||| |||||| ||| || |||||||||||||||||||||||    
T  9091304 ttgtaaccc-tttgtaacactttcatcatattggattggagagctgctctctcc 9091356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 72 - 137
Target Start/End: Complemental strand, 21156554 - 21156489
Alignment:
Q  72 ttgttctttgtgagctcttaagctaatttattgtaacccatttgtatcacttttatcttagtggat 137  Q
    ||||||||||||| || |||||||||||| || ||| |  ||||||||| ||||||| ||||||||    
T  21156554 ttgttctttgtgaacttttaagctaattttttttaatctctttgtatcagttttatcatagtggat 21156489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 113 - 218
Target Start/End: Original strand, 39039995 - 39040103
Alignment:
Q  113 ttgtatcacttttatcttagtggattggagagctgctctc-tccagagagtatgtcatattggaccaaactaggttaccaatc--ttggtatgtttgttt 209  Q
    ||||| |||||| ||| ||||||||||||||| || |||| |||  ||| || ||||||||||||| |||||||| | |||||  ||||| ||||||||     
T  39039995 ttgtaacactttcatcatagtggattggagagttgttctcttccccagattaggtcatattggaccgaactaggtcaacaatcttttggtgtgtttgttc 39040094  T
Q  210 cattctttc 218  Q
    | |||||||    
T  39040095 ctttctttc 39040103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 155
Target Start/End: Original strand, 40372798 - 40372850
Alignment:
Q  102 ttgtaacccatttgtatcacttttatcttagtggattggagagctgctctctcc 155  Q
    ||||||||| |||||| |||||| ||| || |||||||||||||||||||||||    
T  40372798 ttgtaaccc-tttgtaacactttcatcatattggattggagagctgctctctcc 40372850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 106
Target Start/End: Complemental strand, 2075188 - 2075156
Alignment:
Q  74 gttctttgtgagctcttaagctaatttattgta 106  Q
    |||||||||||||| ||||||||||||||||||    
T  2075188 gttctttgtgagcttttaagctaatttattgta 2075156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 124
Target Start/End: Complemental strand, 29196541 - 29196466
Alignment:
Q  51 aaaatgggtaaaatttaggtcttgttctttgtgagctctt--aagctaatttattgtaacccatttgtatcacttt 124  Q
    |||||||||| || |||||  ||||||||||||||||  |  |||||||||| ||| |||||||||||||| ||||    
T  29196541 aaaatgggtagaaattagggtttgttctttgtgagcttgtcaaagctaatttcttggaacccatttgtatctcttt 29196466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 124
Target Start/End: Original strand, 29682373 - 29682447
Alignment:
Q  51 aaaatgggtaaaatttaggtcttgttctttgtgagctc--ttaagctaatttattgtaacccatttgtatcacttt 124  Q
    |||||||||| || ||| || ||||||||||||||||   |||||||||||| |||| ||||||||||||| ||||    
T  29682373 aaaatgggtagaaattatgt-ttgttctttgtgagcttgtttaagctaatttcttgtcacccatttgtatcccttt 29682447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 124
Target Start/End: Original strand, 32891117 - 32891192
Alignment:
Q  51 aaaatgggtaaaatttaggtcttgttctttgtgagct--cttaagctaatttattgtaacccatttgtatcacttt 124  Q
    |||||||||| || ||| || ||||||||||||||||   | |||||||||| ||||||| |||||||||| ||||    
T  32891117 aaaatgggtagaaattaagttttgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctcttt 32891192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 124
Target Start/End: Complemental strand, 39153515 - 39153441
Alignment:
Q  51 aaaatgggtaaaatttaggtcttgttctttgtgagctc--ttaagctaatttattgtaacccatttgtatcacttt 124  Q
    |||||||||| || |||||| |||||| |||||||||   |||||||||||| ||||||| |||||||||| ||||    
T  39153515 aaaatgggtagaaattaggt-ttgttcattgtgagcttgtttaagctaatttcttgtaactcatttgtatcccttt 39153441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 79; Significance: 5e-37; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 2 - 188
Target Start/End: Original strand, 17345421 - 17345607
Alignment:
Q  2 tttctttagtgttttctcttaggattcatagtgattgtgagtgacttgaaaaatgggtaaaatttaggtcttgttctttgtgagctcttaagctaattta 101  Q
    ||||||| ||||||||||||| |||||||   || |||| ||||||| ||||||||||| || |||||| |||||||||||| ||||||| ||||||||     
T  17345421 tttcttttgtgttttctcttaagattcattaagagtgtgggtgacttaaaaaatgggtagaaattaggttttgttctttgtgggctcttatgctaatttc 17345520  T
Q  102 ttgtaacccatttgtatcacttttatcttagtggattggagagctgctctctccagagagtatgtcatattggaccaaactaggtta 188  Q
    ||||| | |||||||| ||| || ||||||||||||||||||||| |||| |||  |||||| |||||||| |||| |||| |||||    
T  17345521 ttgtagcacatttgtaccacgttcatcttagtggattggagagctcctctttccccagagtaggtcatattagaccgaactgggtta 17345607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 13 - 191
Target Start/End: Complemental strand, 22819613 - 22819433
Alignment:
Q  13 ttttctcttaggattcatagtgattgtgagtgacttgaaaaatgggtaaaatttaggtcttgttctttgtgagctcttaagctaatttattgtaacccat 112  Q
    |||||||||||||||||| | || |||| |||||||||||||||| || || ||| ||||| |||||||||||||   |||||||||| ||||||| |||    
T  22819613 ttttctcttaggattcattgagagtgtgggtgacttgaaaaatggttagaaattatgtcttattctttgtgagctaaaaagctaatttcttgtaactcat 22819514  T
Q  113 ttgtatcacttttatcttagtggattggagagctgctctct--ccagagagtatgtcatattggaccaaactaggttacca 191  Q
    |||||||||||| ||||| ||||||||||| ||| ||||||  ||  |||||| |||||||||||||||| | ||||||||    
T  22819513 ttgtatcactttcatcttggtggattggagggctactctctccccccagagtaggtcatattggaccaaattgggttacca 22819433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 5 - 182
Target Start/End: Original strand, 35109442 - 35109619
Alignment:
Q  5 ctttagtgttttctcttaggattcatagtgattgtgagtgacttgaaaaatgggta-aaatttaggtcttgttctttgtgagctcttaagctaatttatt 103  Q
    ||||||| ||||||| |||||||||| |||| |||| |||||||||||| |||||| ||||| |||| |||||||||||||||| |||||||||||| ||    
T  35109442 ctttagtattttctcgtaggattcattgtgagtgtgtgtgacttgaaaattgggtagaaattaaggt-ttgttctttgtgagcttttaagctaatttctt 35109540  T
Q  104 gtaacccatttgtatcacttttatcttagtggattggagagctgctctctccagagagtatgtcatattggaccaaact 182  Q
    |||||| |||||||||  | ||||| ||||||||  |||||||  |||||||  ||| || ||||| ||||||||||||    
T  35109541 gtaacctatttgtatctatcttatcatagtggatcagagagcttgtctctcctcagattaggtcattttggaccaaact 35109619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 46 - 146
Target Start/End: Original strand, 9023785 - 9023885
Alignment:
Q  46 cttgaaaaatgggtaaaatttaggtcttgttctttgtgagctcttaagctaatttattgtaacccatttgtatcacttttatcttagtggattggagagc 145  Q
    |||||||| |||||| || ||||||||| ||||||||||||| ||| |||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  9023785 cttgaaaagtgggtagaaattaggtcttattctttgtgagcttttatgctaatttattgtatcccatttgtatcactttcatcttagtggattggagagc 9023884  T
Q  146 t 146  Q
    |    
T  9023885 t 9023885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 3 - 208
Target Start/End: Complemental strand, 32889634 - 32889427
Alignment:
Q  3 ttctttagtgttttctcttaggattcatagtgattgtgagtgacttgaaaaatgggtaaaatttaggtcttgttctt-tgtgagctcttaagctaattta 101  Q
    |||||| ||||||||||||||||||||| | || |||| ||||  ||||||||||||| || ||||| ||||||||| ||| ||||   |||||| |||     
T  32889634 ttcttttgtgttttctcttaggattcattgagagtgtgggtgatatgaaaaatgggtagaaattaggacttgttcttgtgtaagcttgcaagctattttt 32889535  T
Q  102 -ttgtaacccatttgtatcacttttatcttagtggattggagagctgctctct-ccagagagtatgtcatattggaccaaactaggttaccaatcttggt 199  Q
     ||||||| |||| ||| |||||| |||||||||||||||||||||||||| | ||  ||| || ||||||||||||| |||||| | | ||||||||||    
T  32889534 cttgtaactcatt-gtaacactttcatcttagtggattggagagctgctctatcccccagactaggtcatattggaccgaactagatcaacaatcttggt 32889436  T
Q  200 atgtttgtt 208  Q
     ||||||||    
T  32889435 gtgtttgtt 32889427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 5 - 218
Target Start/End: Original strand, 47703840 - 47704055
Alignment:
Q  5 ctttagtgttttctcttaggattcata--gtgattgtgagtgacttgaaaaatgggtaaaatttaggtcttgttctt-tgtgagctcttaagctaattta 101  Q
    |||| ||||||||||||||||||||||  ||||  ||| |||||    |||||||||| || ||||||||||||||| ||| ||||  |||||||||||     
T  47703840 cttttgtgttttctcttaggattcatattgtgagagtgggtgacac--aaaatgggtagaaattaggtcttgttcttgtgtaagcttgtaagctaatttc 47703937  T
Q  102 ttgtaacccatttgtatcacttttatcttagtggattggagagctgctctct-ccagagagtatgtcatattggaccaaactaggttaccaatcttggta 200  Q
    ||||||  | |||||| |||||| ||| |||||||||||||||||||||||| ||  ||| || ||||||||||||| |||| ||| | ||||||||||     
T  47703938 ttgtaattcttttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatcttggtg 47704037  T
Q  201 tgtttgtttcattctttc 218  Q
    ||||| || | |||||||    
T  47704038 tgttttttcctttctttc 47704055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 51 - 218
Target Start/End: Complemental strand, 19073075 - 19072905
Alignment:
Q  51 aaaatgggtaaaatttaggtcttgttcttt-gtgagctcttaagctaatttattgtaacccatttgtatcacttttatcttagtggattggagagctgct 149  Q
    |||||||||| || |||||| ||||||||| || ||||  ||||||||||| ||||||| | |||||| |||||| ||||||||||||||||||||||||    
T  19073075 aaaatgggtagaaattaggtattgttcttttgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcttagtggattggagagctgct 19072976  T
Q  150 ctct-ccagagagtatgtcatattggaccaaactaggttaccaatc-ttggtatgtttgtttcattctttc 218  Q
    |||| ||  ||| || ||||||||||||| |||| ||| | ||||| ||||| |||||||| | |||||||    
T  19072975 ctctcccccagattaggtcatattggaccgaactgggtcaacaatctttggtgtgtttgttcctttctttc 19072905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 51 - 218
Target Start/End: Complemental strand, 19120965 - 19120795
Alignment:
Q  51 aaaatgggtaaaatttaggtcttgttcttt-gtgagctcttaagctaatttattgtaacccatttgtatcacttttatcttagtggattggagagctgct 149  Q
    |||||||||| || |||||| ||||||||| || ||||  ||||||||||| ||||||| | |||||| |||||| ||||||||||||||||||||||||    
T  19120965 aaaatgggtagaaattaggtattgttcttttgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcttagtggattggagagctgct 19120866  T
Q  150 ctct-ccagagagtatgtcatattggaccaaactaggttaccaatc-ttggtatgtttgtttcattctttc 218  Q
    |||| ||  ||| || ||||||||||||| |||| ||| | ||||| ||||| |||||||| | |||||||    
T  19120865 ctctcccccagattaggtcatattggaccgaactgggtcaacaatctttggtgtgtttgttcctttctttc 19120795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 51 - 208
Target Start/End: Original strand, 16124466 - 16124625
Alignment:
Q  51 aaaatgggtaaaatttaggtcttgttctt-tgtgagctcttaagctaatttattgtaacccatttgtatcacttttatcttagtggattggagagctgct 149  Q
    |||||||||| || ||||||||||||||| ||| ||||  ||||||||||| ||||||| | |||||| |||||| ||| ||||||||||||| ||||||    
T  16124466 aaaatgggtagaaattaggtcttgttcttatgtaagcttataagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagggctgct 16124565  T
Q  150 ctct-ccagagagtatgtcatattggaccaaactaggttaccaatcttggtatgtttgtt 208  Q
    |||| ||  ||| || ||||||||||||| ||||  || | |||||||||| ||||||||    
T  16124566 ctctcccccagattaggtcatattggaccgaactgagtcaacaatcttggtgtgtttgtt 16124625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 217
Target Start/End: Original strand, 47098730 - 47098942
Alignment:
Q  5 ctttagtgttttctcttaggattcatagtgattgtgagtgacttgaaaaatgggtaaaatttaggtcttgttcttt-gtgagctcttaagctaatttatt 103  Q
    |||| ||||||| ||||||| ||||| | || |||| ||||  |||||| |||||| || ||||| |||||||||| || ||||  ||||||||||| ||    
T  47098730 cttttgtgttttttcttaggtttcattgagagtgtgggtgatgtgaaaa-tgggtagaaattaggacttgttcttttgtaagcttataagctaatttctt 47098828  T
Q  104 gtaacccatttgtatcacttttatcttagtggattggagagctgctctct-ccagagagtatgtcatattggaccaaactaggttaccaatcttggtatg 202  Q
    ||||| |||| ||| |||||| ||||||||||||||||| |||||||||| ||  ||| |  ||||||||||||| |||| ||| | |||||||||| ||    
T  47098829 gtaactcatt-gtaacactttcatcttagtggattggagggctgctctctcccccagattcggtcatattggaccgaactgggtcaacaatcttggtgtg 47098927  T
Q  203 tttgtttcattcttt 217  Q
    |||||| | ||||||    
T  47098928 tttgttcctttcttt 47098942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 51 - 218
Target Start/End: Complemental strand, 9476408 - 9476239
Alignment:
Q  51 aaaatgggtaaaatttaggtcttgttctt-tgtgagctcttaagctaatttattgtaacccatttgtatcacttttatcttagtggattggagagctgct 149  Q
    ||||||| || || ||||||||||||||| ||| ||||  ||||||||||| || |||| | ||||||  ||||| ||| ||||||||||||||||||||    
T  9476408 aaaatggatagaaattaggtcttgttcttgtgtaagcttgtaagctaatttcttataactcttttgtaatactttcatcatagtggattggagagctgct 9476309  T
Q  150 ctct-ccagagagtatgtcatattggaccaaactaggttaccaatcttggtatgtttgtttcattctttc 218  Q
    |||| ||  ||| || ||||||||||||| |||| ||| | |||||||||| |||||||| | |||||||    
T  9476308 ctctcccctagattaggtcatattggaccgaactgggtcaacaatcttggtgtgtttgttcctttctttc 9476239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 154
Target Start/End: Original strand, 32736901 - 32737050
Alignment:
Q  5 ctttagtgttttctcttaggattcatagtgattgtgagtgacttgaaaaatgggtaaaatttaggtcttgttctttgtgagctcttaagctaatttattg 104  Q
    |||||| ||||||||||||||||||| |||| |||   |||||||||||||||||| || |||||  ||||||||| ||| || |||||||||||| |||    
T  32736901 ctttagggttttctcttaggattcattgtgagtgtcgatgacttgaaaaatgggtagaaattagggtttgttctttatgaacttttaagctaattttttg 32737000  T
Q  105 taacccatttgtatcacttttatcttagtggattggagagctgctctctc 154  Q
    |||||  |||||||||| || ||| |||| |||  ||||| | |||||||    
T  32737001 taacctctttgtatcaccttcatcatagttgatcagagagtttctctctc 32737050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 51 - 218
Target Start/End: Complemental strand, 29651958 - 29651789
Alignment:
Q  51 aaaatgggtaaaatttaggtcttgttctt-tgtgagctcttaagctaatttattgtaacccatttgtatcacttttatcttagtggattggagagctgct 149  Q
    |||||||||| || ||||||||||||||| ||| ||||  |||| |||||| ||||||  | |||||| |||||| ||| ||||||||||||| ||||||    
T  29651958 aaaatgggtagaaattaggtcttgttcttgtgtaagcttataagttaatttcttgtaattcttttgtaacactttcatcatagtggattggagtgctgct 29651859  T
Q  150 ctct-ccagagagtatgtcatattggaccaaactaggttaccaatcttggtatgtttgtttcattctttc 218  Q
    |||| ||  ||| || ||||||||||||| |||| ||| |  ||||||||| |||||||| | |||||||    
T  29651858 ctctcccccagattaggtcatattggaccgaactgggtcaaaaatcttggtgtgtttgttcctttctttc 29651789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 47102740 - 47102959
Alignment:
Q  1 ctttctttagtgttttctcttaggattcatagtgattgtgagtgacttgaaaaatggg--taaaatttaggtcttgttc-tttgtgagctcttaagctaa 97  Q
    |||||||| ||||||| ||||||||||||| | || |||||||||  |||||||||||  || || ||||| ||||||| |||||  |||  |||| |||    
T  47102740 ctttcttttgtgttttttcttaggattcattgagagtgtgagtgatatgaaaaatgggtatagaaattaggacttgttcttttgtatgcttataagttaa 47102839  T
Q  98 tttattgtaacccatttgtatcacttttatcttagtggattggagagctgctctct-ccagagagtatgtcatattggaccaaactaggttaccaatctt 196  Q
    ||| ||||||| || ||||| || ||| ||||||||||||||||  |||||||||| ||  ||| || ||||||||||||| |||| ||| | |||| ||    
T  47102840 tttcttgtaactca-ttgtaacattttcatcttagtggattggatggctgctctctcccctagattaggtcatattggaccgaactgggtcaacaatttt 47102938  T
Q  197 ggtatgtttgtttcattcttt 217  Q
    ||| |||||||| | ||||||    
T  47102939 ggtgtgtttgttcctttcttt 47102959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 51 - 218
Target Start/End: Complemental strand, 13598545 - 13598376
Alignment:
Q  51 aaaatgggtaaaatttaggtcttgttctt-tgtgagctcttaagctaatttattgtaacccatttgtatcacttttatcttagtggattggagagctgct 149  Q
    |||||| ||| || ||| ||||||||||| ||| ||||  ||||||||||| ||||| | | |||||| |||||| ||| |||||||||| || ||||||    
T  13598545 aaaatgagtagaaattaagtcttgttcttgtgtaagcttataagctaatttcttgtatctcttttgtaacactttcatcatagtggattgaagggctgct 13598446  T
Q  150 ctct-ccagagagtatgtcatattggaccaaactaggttaccaatcttggtatgtttgtttcattctttc 218  Q
    |||| ||  ||| || ||||||||||||| |||| ||| | |||||||||| |||||||| | |||||||    
T  13598445 ctctcccccagattaggtcatattggaccgaactgggtcaacaatcttggtgtgtttgttcctttctttc 13598376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 90 - 208
Target Start/End: Original strand, 27104362 - 27104481
Alignment:
Q  90 taagctaatttattgtaacccatttgtatcacttttatcttagtggattggagagctgctctct-ccagagagtatgtcatattggaccaaactaggtta 188  Q
    ||||||||||| ||||||| | |||||| |||||| ||| |||||||||||||||||||||||| ||  ||| || || |||||||||| ||||  || |    
T  27104362 taagctaatttcttgtaactcttttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggttatattggaccgaactgtgtca 27104461  T
Q  189 ccaatcttggtatgtttgtt 208  Q
     |||||||||| ||||||||    
T  27104462 acaatcttggtgtgtttgtt 27104481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 11 - 155
Target Start/End: Original strand, 918390 - 918535
Alignment:
Q  11 tgttttctcttaggattcatagtgattgtgagtg-acttgaaaaatgggtaaaatttaggtcttgttctttgtgagctcttaagctaatttattgtaacc 109  Q
    |||||||||||||||||||| |||  | |||||| | |||||||||||||| || ||| |  |||||||||||||| |  |||| |||||| ||||||      
T  918390 tgttttctcttaggattcattgtgggtttgagtggaattgaaaaatgggtagaaattatggtttgttctttgtgagtttgtaagataatttcttgtaata 918489  T
Q  110 catttgtatcacttttatcttagtggattggagagctgctctctcc 155  Q
      ||||||||||| ||||| |||||| |||||||| | ||||||||    
T  918490 tctttgtatcactcttatcatagtggtttggagagtttctctctcc 918535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 5 - 127
Target Start/End: Complemental strand, 10997149 - 10997026
Alignment:
Q  5 ctttagtgtttt-ctcttaggattcatagtgattgtgagtgacttgaaaaatgggtaaaatttaggtcttgttctttgtgagctcttaagctaatttatt 103  Q
    |||||||||||| || ||||||||||  |||| || | ||||||||||||||||||| || |||||  ||||| ||||| | || ||||| |||||| ||    
T  10997149 ctttagtgtttttcttttaggattcaacgtgagtgagggtgacttgaaaaatgggtagaaattagggtttgttatttgttatcttttaagttaatttctt 10997050  T
Q  104 gtaacccatttgtatcacttttat 127  Q
    |||||  |||||||||||| ||||    
T  10997049 gtaacatatttgtatcactcttat 10997026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 52 - 218
Target Start/End: Original strand, 26644849 - 26645018
Alignment:
Q  52 aaatgggtaaaatttaggtcttgttctt-tgtgagctcttaagctaatttattgtaacccatttgtatcacttttatcttagtggattggagagctgctc 150  Q
    ||||||||| || ||||||||||||||| ||| ||||   |||||| ||| ||||||| | |||||| |||||| ||| || ||||||||||||||||||    
T  26644849 aaatgggtagaaattaggtcttgttcttgtgtaagcttgcaagctattttcttgtaactc-tttgtaacactttcatcataatggattggagagctgctc 26644947  T
Q  151 tct-ccagagagtatgtcatattggaccaaactaggttaccaatc--ttggtatgtttgtttcattctttc 218  Q
    ||| ||  ||| || ||||||||||||| |||| ||| | |||||  ||||| |||||||| | |||||||    
T  26644948 tctcccccagattaggtcatattggaccgaactgggtcaacaatcttttggtgtgtttgttcctttctttc 26645018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 3019926 - 3019772
Alignment:
Q  1 ctttctttagtgttttctcttaggattcatagtgattgtgagtgacttgaaaaatgggtaaaatttaggtcttgttctttgtgagctcttaagctaattt 100  Q
    ||||||||| |||||||| | |||||||||  ||  | ||||||||||||||||| |||| || ||||    ||||||||||||| |  ||||| |||||    
T  3019926 ctttctttattgttttctatcaggattcattttgggtttgagtgacttgaaaaattggtagaaattagaaaatgttctttgtgagtttgtaagcaaattt 3019827  T
Q  101 attgtaacccatttgtatcacttttatcttagtggattggagagctgctctctcc 155  Q
     || |||||  || ||||||| |||||| ||||||| ||||||  ||||||||||    
T  3019826 cttataacctcttcgtatcacgtttatcatagtggaatggagaattgctctctcc 3019772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 137
Target Start/End: Original strand, 11032268 - 11032357
Alignment:
Q  48 tgaaaaatgggtaaaatttaggtcttgttctttgtgagctcttaagctaatttattgtaacccatttgtatcacttttatcttagtggat 137  Q
    ||||||||||||| || ||| || |||||||||||||| | |||| ||||||| ||||||||  ||| ||||||| ||||| ||||||||    
T  11032268 tgaaaaatgggtagaaattatgttttgttctttgtgagtttttaatctaatttcttgtaacctctttatatcactattatcatagtggat 11032357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 52 - 155
Target Start/End: Original strand, 19358794 - 19358898
Alignment:
Q  52 aaatgggtaaaatttaggtcttgttctt-tgtgagctcttaagctaattta-ttgtaacccatttgtatcacttttatcttagtggattggagagctgct 149  Q
    ||||||||| ||| |||||||||||||| ||| ||||   |||||| |||  ||||||||| |||||| |||||| ||| ||||||||||||||||||||    
T  19358794 aaatgggtagaatctaggtcttgttcttgtgtaagcttgcaagctatttttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgct 19358892  T
Q  150 ctctcc 155  Q
    ||||||    
T  19358893 ctctcc 19358898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 52 - 155
Target Start/End: Original strand, 24202720 - 24202824
Alignment:
Q  52 aaatgggtaaaatttaggtcttgttctt-tgtgagctcttaagctaattta-ttgtaacccatttgtatcacttttatcttagtggattggagagctgct 149  Q
    ||||||||| ||| |||||||||||||| ||| ||||   |||||| |||  ||||||||| |||||| |||||| ||| ||||||||||||||||||||    
T  24202720 aaatgggtagaatctaggtcttgttcttgtgtaagcttgcaagctatttttcttgtaaccc-tttgtaacactttcatcatagtggattggagagctgct 24202818  T
Q  150 ctctcc 155  Q
    ||||||    
T  24202819 ctctcc 24202824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 52 - 155
Target Start/End: Complemental strand, 3281853 - 3281750
Alignment:
Q  52 aaatgggtaaaatttaggtcttgttctt-tgtgagctcttaagctaatttattgtaacccatttgtatcacttttatcttagtggattggagagctgctc 150  Q
    ||||||||| || ||||||||||||||| ||| ||||   |||||| ||| ||||||| | |||||| |||||| ||| | |||||||||||||||||||    
T  3281853 aaatgggtagaaattaggtcttgttcttgtgtaagcttgcaagctattttcttgtaactc-tttgtaacactttcatcatcgtggattggagagctgctc 3281755  T
Q  151 tctcc 155  Q
    |||||    
T  3281754 tctcc 3281750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 137
Target Start/End: Complemental strand, 8281510 - 8281378
Alignment:
Q  5 ctttagtgttttctcttaggattcatagtgattgtgagtgacttgaaaaatgggtaaaatttaggtcttgttctttgtgagctcttaagctaatttattg 104  Q
    ||||||||||||||||| |||||||| |||| || | ||||||| || ||| | || || ||||   |||||||||||||||  ||| | |||||| |||    
T  8281510 ctttagtgttttctctttggattcattgtgagtgcgggtgacttaaataattgatagaaattagaatttgttctttgtgagcgattatgttaatttcttg 8281411  T
Q  105 taacccatttgtatcacttttatcttagtggat 137  Q
    ||||  |||||||||| | ||||| ||||||||    
T  8281410 taacatatttgtatcattcttatcatagtggat 8281378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 130
Target Start/End: Original strand, 40816721 - 40816844
Alignment:
Q  5 ctttagtgttttctcttaggattcatagtgattgtgagtgacttgaaaaatgggtaaaatttaggtcttgttc-tttgtgagctcttaagctaatttatt 103  Q
    |||| ||||||||||||||||||||| | || |||| |||||   | ||||| ||| || ||||||||||||| ||||| ||||  ||||||||||| ||    
T  40816721 cttttgtgttttctcttaggattcattgagagtgtgggtgac---acaaatgagtagaaattaggtcttgttcttttgtaagcttataagctaatttctt 40816817  T
Q  104 gtaacccatttgtatcacttttatctt 130  Q
    ||||| | |||||| |||||| |||||    
T  40816818 gtaactcttttgtaacactttcatctt 40816844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 218
Target Start/End: Complemental strand, 775757 - 775650
Alignment:
Q  112 tttgtatcacttttatcttagtggattggagagctgctctct-ccagagagtatgtcatattggaccaaactaggttaccaatcttggtatgtttgtttc 210  Q
    |||||| |||||| ||||||||||||||||||||| |||||| ||  ||| || ||||||||||||| || | ||| | |||||||| | |||||||| |    
T  775757 tttgtaacactttcatcttagtggattggagagctactctctcccccagattaggtcatattggaccgaattgggtcaacaatcttgatgtgtttgttcc 775658  T
Q  211 attctttc 218  Q
     |||||||    
T  775657 tttctttc 775650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 102 - 155
Target Start/End: Original strand, 19361435 - 19361487
Alignment:
Q  102 ttgtaacccatttgtatcacttttatcttagtggattggagagctgctctctcc 155  Q
    ||||||||| |||||| |||||| ||| ||||||||||||||||||||||||||    
T  19361435 ttgtaaccc-tttgtaacactttcatcatagtggattggagagctgctctctcc 19361487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 102 - 155
Target Start/End: Original strand, 19380075 - 19380127
Alignment:
Q  102 ttgtaacccatttgtatcacttttatcttagtggattggagagctgctctctcc 155  Q
    ||||||||| |||||| |||||| ||| ||||||||||||||||||||||||||    
T  19380075 ttgtaaccc-tttgtaacactttcatcatagtggattggagagctgctctctcc 19380127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 124
Target Start/End: Complemental strand, 8550941 - 8550867
Alignment:
Q  51 aaaatgggtaaaatttaggtcttgttctttgtgagctc--ttaagctaatttattgtaacccatttgtatcacttt 124  Q
    |||||||||| || |||||| ||||||||||||||||   |||||||||||| ||||||| |||||||||| ||||    
T  8550941 aaaatgggtagaaattaggt-ttgttctttgtgagcttgtttaagctaatttcttgtaactcatttgtatcccttt 8550867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 72 - 124
Target Start/End: Complemental strand, 834301 - 834247
Alignment:
Q  72 ttgttctttgtgagctc--ttaagctaatttattgtaacccatttgtatcacttt 124  Q
    ||||||||||||||||   |||||||||||| |||||||||||||||||| ||||    
T  834301 ttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatcccttt 834247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 11031378 - 11031433
Alignment:
Q  5 ctttagtgtttt-ctcttaggattcatagtgattgtgagtgacttgaaaaatgggt 59  Q
    |||||||||||| |||||||||| ||| |||| ||||| |||||||||||||||||    
T  11031378 ctttagtgtttttctcttaggatacattgtgagtgtgaatgacttgaaaaatgggt 11031433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 49 - 125
Target Start/End: Original strand, 15820319 - 15820396
Alignment:
Q  49 gaaaaatgggtaaaatttaggtcttgttctttgtgagct--cttaagctaatttattgtaacccatttgtatcactttt 125  Q
    |||| |||||||||| |||||| ||||||||||||||||   | |||||||||| ||||||| |||||||||| |||||    
T  15820319 gaaagatgggtaaaaattaggt-ttgttctttgtgagcttgttgaagctaatttcttgtaacacatttgtatctctttt 15820396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 143
Target Start/End: Original strand, 48382457 - 48382524
Alignment:
Q  76 tctttgtgagctcttaagctaatttattgtaacccatttgtatcacttttatcttagtggattggaga 143  Q
    ||||||||| ||  |||| |||||| |||||||| |||||||||||||| ||| || |||||||||||    
T  48382457 tctttgtgaacttgtaagttaatttcttgtaacctatttgtatcactttcatcatattggattggaga 48382524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 124
Target Start/End: Original strand, 31659250 - 31659326
Alignment:
Q  49 gaaaaatgggtaaaatttaggtcttgttctttgtgagctctt--aagctaatttattgtaacccatttgtatcacttt 124  Q
    |||||||||||| || ||||| || ||||||||||||||  |  |||||||||| |||||||||||||||||| ||||    
T  31659250 gaaaaatgggtagaaattagggct-gttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt 31659326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 124
Target Start/End: Complemental strand, 47255496 - 47255420
Alignment:
Q  49 gaaaaatgggtaaaatttaggtcttgttctttgtgagctctt--aagctaatttattgtaacccatttgtatcacttt 124  Q
    |||||||||||| || |||||  ||||||||||||||||  |  |||||||||| |||||||||||||||||| ||||    
T  47255496 gaaaaatgggtagaaattaggg-ttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt 47255420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 152
Target Start/End: Complemental strand, 37918843 - 37918704
Alignment:
Q  11 tgttttctcttaggattcatagt-gattgtgagtgacttgaaaaatgggtaaaatttaggtcttgttctttgtgagctcttaagctaatttattgtaacc 109  Q
    |||||||||||||||||||| || |||||  || |||||||||||| |||| ||||||||    ||||||| ||||||   || ||||||| |||||||     
T  37918843 tgttttctcttaggattcattgtggattg-aagcgacttgaaaaataggtagaatttagg---ggttctttatgagcttgaaatctaatttcttgtaaca 37918748  T
Q  110 catttgtatcactt-ttatcttagtggattggagagctgctctc 152  Q
      |||||||||||| || || |||||||||||||| || |||||    
T  37918747 tctttgtatcacttattttcatagtggattggagatctactctc 37918704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 155
Target Start/End: Original strand, 21536561 - 21536624
Alignment:
Q  91 aagctaatttattgtaacccatttgtatcacttttatcttagtggattggagagctgctctctcc 155  Q
    |||||| ||| ||||||| | |||||| |||||| ||  ||||||||||||||||||||||||||    
T  21536561 aagctattttcttgtaactc-tttgtaacactttcattatagtggattggagagctgctctctcc 21536624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 124
Target Start/End: Original strand, 41360928 - 41361002
Alignment:
Q  51 aaaatgggtaaaatttaggtcttgttctttgtgagctctt--aagctaatttattgtaacccatttgtatcacttt 124  Q
    |||||||||| || |||||| ||||||||||||||||  |  || ||||||| |||||||||||||||||| ||||    
T  41360928 aaaatgggtagaaattaggt-ttgttctttgtgagcttgttgaaactaatttcttgtaacccatttgtatctcttt 41361002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 124
Target Start/End: Original strand, 46064932 - 46065006
Alignment:
Q  51 aaaatgggtaaaatttaggtcttgttctttgtgagctc--ttaagctaatttattgtaacccatttgtatcacttt 124  Q
    ||||||| ||||| |||||| |||||||||||||||||  | |||||||||| ||||||| ||| |||||| ||||    
T  46064932 aaaatggataaaaattaggt-ttgttctttgtgagctcgttgaagctaatttcttgtaactcatgtgtatctcttt 46065006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 10 - 209
Target Start/End: Complemental strand, 23718 - 23517
Alignment:
Q  10 gtgttttctcttaggattcatagtgattgtgagtgacttgaaaaatgggtaaaatttaggtcttgttctttgtgagctcttaagctaatttattg----t 105  Q
    ||||||||||||||||||||| |||| ||||  |||| || |||||||||| || |||| ||||||| ||||||||||  ||||  ||||| |||    |    
T  23718 gtgttttctcttaggattcattgtgagtgtgtctgacatg-aaaatgggtagaaattagatcttgttttttgtgagcttctaagaaaatttcttgtaatt 23620  T
Q  106 aacccatttgtatcacttttatcttagtggattggagagctgctctct-ccagagagtatgtcatattggaccaaactaggttaccaatcttggtatgtt 204  Q
    |||| |||||||||||||| ||||||||| |||||| |||| || ||| ||  | |||| ||||||||||||| |||||||||||| |||||||| ||||    
T  23619 aacctatttgtatcactttcatcttagtgaattggatagcttctttctcccctaaagtaggtcatattggaccgaactaggttacc-atcttggt-tgtt 23522  T
Q  205 tgttt 209  Q
    |||||    
T  23521 tgttt 23517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 154
Target Start/End: Original strand, 102399 - 102548
Alignment:
Q  5 ctttagtgttttctcttaggattcatagtgattgtgagtgacttgaaaaatgggtaaaatttaggtcttgttctttgtgagctcttaagctaatttattg 104  Q
    ||||||||||||||||| | ||| ||  ||| |||| ||||||||||||||||||| || |||||  ||||| |||||||||| ||||| |||||| |||    
T  102399 ctttagtgttttctcttcgaatttattatgagtgtgtgtgacttgaaaaatgggtagaaattagggtttgttttttgtgagcttttaagataatttcttg 102498  T
Q  105 taacccatttgtatcacttttatcttagtggattggagagctgctctctc 154  Q
    |||||  ||||||||||| ||||| | ||||||  ||||| || ||||||    
T  102499 taacctctttgtatcactcttatcattgtggatcagagagttgttctctc 102548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 205
Target Start/End: Complemental strand, 14876 - 14674
Alignment:
Q  5 ctttagtgttttctcttaggattca--tagtgattgtgagtgacttgaaaaatgggtaaaatttaggtcttgttctttgtgagctcttaagctaatttat 102  Q
    |||||||||||||||||||||||||  | |||| |||| |||||||||||||| ||||  |  ||||  | |||||||||||||| |||||||||||| |    
T  14876 ctttagtgttttctcttaggattcactttgtgagtgtgggtgacttgaaaaataggtaggaactagggttagttctttgtgagcttttaagctaatttct 14777  T
Q  103 tgtaacccatttgtatcacttttatcttagtggattggagagctgctctctc-cagagagtatgtcatattggaccaaactaggttaccaatcttggtat 201  Q
     ||||||  ||||||||||| ||||| || | ||| |||| | ||||||||| |  | |||||||||| |||||||||| ||||| | |||| ||||| |    
T  14776 cgtaacctctttgtatcactcttatcataattgatcggag-gttgctctctctcccatagtatgtcattttggaccaaattaggtaaacaatattggtgt 14678  T
Q  202 gttt 205  Q
    ||||    
T  14677 gttt 14674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 65 - 208
Target Start/End: Complemental strand, 10862 - 10717
Alignment:
Q  65 ttaggtcttgttctt-tgtgagctcttaagctaatttattgtaacccatttgtatcacttttatcttagtggattggagagctgctctct-ccagagagt 162  Q
    ||||||||||||||| ||| ||||  ||| ||||||| ||||||| | |||||| |||||| |||||||||||||||||||||||||||| ||  | | |    
T  10862 ttaggtcttgttcttgtgtaagcttgtaaactaatttcttgtaactcttttgtaacactttcatcttagtggattggagagctgctctctcccccaaatt 10763  T
Q  163 atgtcatattggaccaaactaggttaccaatcttggtatgtttgtt 208  Q
    | ||||||||||||| |||| ||| |  ||||||||| ||||||||    
T  10762 aggtcatattggaccgaactgggtcaataatcttggtgtgtttgtt 10717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 51 - 218
Target Start/End: Complemental strand, 5830 - 5661
Alignment:
Q  51 aaaatgggtaaaatttaggtcttgttctt-tgtgagctcttaagctaatttattgtaacccatttgtatcacttttatcttagtggattggagagctgct 149  Q
    |||||| ||| || ||| ||||||||||| ||| ||||  ||||||||||| ||||| | | |||||| |||||| ||| |||||||||| || ||||||    
T  5830 aaaatgagtagaaattaagtcttgttcttgtgtaagcttataagctaatttcttgtatctcttttgtaacactttcatcatagtggattgaagggctgct 5731  T
Q  150 ctct-ccagagagtatgtcatattggaccaaactaggttaccaatcttggtatgtttgtttcattctttc 218  Q
    |||| ||  ||| || ||||||||||||| |||| ||| | |||||||||| |||||||| | |||||||    
T  5730 ctctcccccagattaggtcatattggaccgaactgggtcaacaatcttggtgtgtttgttcctttctttc 5661  T

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Target: scaffold0006; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 51 - 218
Target Start/End: Complemental strand, 2639 - 2470
Alignment:
Q  51 aaaatgggtaaaatttaggtcttgttctt-tgtgagctcttaagctaatttattgtaacccatttgtatcacttttatcttagtggattggagagctgct 149  Q
    |||||||||| || |||| |||||||||| ||| ||||  ||||||||||| || |||  | |||||| |||||| ||| ||||||||||||| ||||||    
T  2639 aaaatgggtagaaattagttcttgttcttgtgtaagcttataagctaatttcttataattcttttgtaacactttcatcatagtggattggagggctgct 2540  T
Q  150 ctct-ccagagagtatgtcatattggaccaaactaggttaccaatcttggtatgtttgtttcattctttc 218  Q
     ||| ||  ||| || ||||||||||| | |||| ||| | |||||||||| |||||||| | |||||||    
T  2539 gtctcccccagattaggtcatattggagcgaactgggtcaacaatcttggtgtgtttgttcctttctttc 2470  T

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Target: scaffold0176 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 153
Target Start/End: Complemental strand, 17454 - 17307
Alignment:
Q  5 ctttagtgttttctcttaggattcatagtgattgtgagtgacttgaaaaatgggtaaaatttaggtcttgttctt-tgtgagctcttaagctaatttatt 103  Q
    |||| |||||||||||||||||||||   || ||||||||||    ||||| |||| || ||||||||||||||| ||| ||||  ||||||||||| ||    
T  17454 cttttgtgttttctcttaggattcattaagagtgtgagtgacac--aaaataggtagaaattaggtcttgttcttgtgtaagcttataagctaatttctt 17357  T
Q  104 gtaacccatttgtatcacttttatcttagtggattggagagctgctctct 153  Q
    ||||| | |||||| |||||| ||| || |||||||||| | ||||||||    
T  17356 gtaactcttttgtaacactttcatcataatggattggagggttgctctct 17307  T

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Target: scaffold0036 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 51 - 155
Target Start/End: Complemental strand, 85829 - 85725
Alignment:
Q  51 aaaatgggtaaaatttaggtcttgttctt-tgtgagctcttaagctaatttattgtaacccatttgtatcacttttatcttagtggattggagagctgct 149  Q
    |||||||||| || |||||||||| |||| ||| |||| |||||||||||| ||||||| | |||||| |||||| ||| | |||||||||||||| |||    
T  85829 aaaatgggtagaaattaggtcttgctcttgtgtaagcttttaagctaatttcttgtaactc-tttgtaacactttcatcatggtggattggagagccgct 85731  T
Q  150 ctctcc 155  Q
    ||||||    
T  85730 ctctcc 85725  T

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Target: scaffold0087 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 52 - 155
Target Start/End: Original strand, 43913 - 44016
Alignment:
Q  52 aaatgggtaaaatttaggtcttgttctt-tgtgagctcttaagctaatttattgtaacccatttgtatcacttttatcttagtggattggagagctgctc 150  Q
    ||||||||| || ||||||||||||||| | | ||||   |||||| ||| ||||||| | |||||| |||||| ||| |||||||||||||||||||||    
T  43913 aaatgggtagaaattaggtcttgttcttgtataagcttgcaagctattttcttgtaactc-tttgtaacactttcatcatagtggattggagagctgctc 44011  T
Q  151 tctcc 155  Q
    |||||    
T  44012 tctcc 44016  T

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Target: scaffold0140 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 112 - 210
Target Start/End: Original strand, 8431 - 8532
Alignment:
Q  112 tttgtatcacttttatcttagtggattggagagctgctctct-ccagagagtatgtcatattggaccaaactaggttaccaatc--ttggtatgtttgtt 208  Q
    |||||| |||||| ||| |||||||||||||||||||||||| ||  ||| || ||||||||||||| |||| ||| | |||||  ||||| ||||||||    
T  8431 tttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatcttttggtgtgtttgtt 8530  T
Q  209 tc 210  Q
    ||    
T  8531 tc 8532  T

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Target: scaffold0188 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 102 - 155
Target Start/End: Original strand, 17955 - 18007
Alignment:
Q  102 ttgtaacccatttgtatcacttttatcttagtggattggagagctgctctctcc 155  Q
    ||||||||| |||||| |||||| ||| ||||||||||||||||||||||||||    
T  17955 ttgtaaccc-tttgtaacactttcatcatagtggattggagagctgctctctcc 18007  T

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Target: scaffold0188; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 102 - 155
Target Start/End: Original strand, 24048 - 24100
Alignment:
Q  102 ttgtaacccatttgtatcacttttatcttagtggattggagagctgctctctcc 155  Q
    ||||||||| |||||| |||||| ||| ||||||||||||||||||||||||||    
T  24048 ttgtaaccc-tttgtaacactttcatcatagtggattggagagctgctctctcc 24100  T

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Target: scaffold0076 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 49 - 138
Target Start/End: Original strand, 15937 - 16026
Alignment:
Q  49 gaaaaatgggtaaaatttaggtcttgttctttgtgagctcttaagctaatttattgtaacccatttgtatcacttttatcttagtggatt 138  Q
    ||||||||||  ||| |||||| |||||||||||| | | |||||||||||| |||||||   ||||||| ||| ||||| |||||||||    
T  15937 gaaaaatgggggaaaattaggttttgttctttgtgggtttttaagctaatttcttgtaacatctttgtataactcttatcatagtggatt 16026  T

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Target: scaffold0236 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 72 - 124
Target Start/End: Original strand, 10525 - 10577
Alignment:
Q  72 ttgttctttgtgagctcttaagctaatttattgtaacccatttgtatcacttt 124  Q
    |||||||||||||||||||  |||||||||||||||||  |||||||| ||||    
T  10525 ttgttctttgtgagctcttgtgctaatttattgtaaccattttgtatctcttt 10577  T

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Target: scaffold0466 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 124
Target Start/End: Original strand, 7339 - 7415
Alignment:
Q  49 gaaaaatgggta-aaatttaggtcttgttctttgtgagctctt--aagctaatttattgtaacccatttgtatcacttt 124  Q
    |||||||||||| ||||| ||||  |||||||||||||||  |  |||||||||| |||||||||||||||||| ||||    
T  7339 gaaaaatgggtagaaattaaggt--tgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctcttt 7415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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