View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10076_low_7 (Length: 245)
Name: NF10076_low_7
Description: NF10076
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10076_low_7 |
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Alignment Details
Target: chr6 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 3376792 - 3376561
Alignment:
| Q |
1 |
cacctcattttcaacctcttctttgaaattctcactaaccttaccattggaaaacatgaaaccttttccaacctcgaatccgttttctgaggtattgtct |
100 |
Q |
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| T |
3376792 |
cacctcattttcaacctcttctttgaaattctcactaaccttaccattggaaaacatgaaaccttttccaacctcgaatccgttttctgaggtattgttt |
3376693 |
T |
|
| Q |
101 |
gctttgagcaaagtcgaatatggaacaaaaccattgccttgactatgagatacaagttccaaagaacctaatgttgttgatgtcaatgctacaacatgat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3376692 |
gctttgagcaaagtcgaatatggaacaaaaccattgccttgactatgagatacaagttccaaagaacctaatgttgttgatgtcaatgctacaacatgat |
3376593 |
T |
|
| Q |
201 |
aactatctcctttattttgaggtggatgatgt |
232 |
Q |
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|||||||||||||||||||||||||||||||| |
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| T |
3376592 |
aactatctcctttattttgaggtggatgatgt |
3376561 |
T |
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