View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10080_high_7 (Length: 546)
Name: NF10080_high_7
Description: NF10080
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10080_high_7 |
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Alignment Details
Target: chr3 (Bit Score: 496; Significance: 0; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 496; E-Value: 0
Query Start/End: Original strand, 11 - 530
Target Start/End: Original strand, 26985708 - 26986227
Alignment:
| Q |
11 |
caaaggaactaacctaataaattgtgatcaaaatcataatgaagatcactccaaatgaaattatggaggagaatgtctccaacgcgtcttggacggaatc |
110 |
Q |
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| T |
26985708 |
caaaggaactaacctaataaattgtgatcaaaatcataatgaagatcactccaaatgaaattatggaggagaatgtctccaacgcgtcttggacggaatc |
26985807 |
T |
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| Q |
111 |
agaacttgaaaatcgcaaccgaagagtggtgaaaatggtgtacaaggcactactacgcggtggtgagacggagaagatagcaaaagtggtaggaaaagaa |
210 |
Q |
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| T |
26985808 |
agaacttgaaaatcgcaaccggagggtggtgaaaatggtgtacaaggcactactacgtggtggtgagacggagaagatagcaaaagtggtaggaaaagaa |
26985907 |
T |
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| Q |
211 |
ttggaatggaggtatcatggacctccacattcccaacatatgatgaaaatgttgaccggtgagtcgacacaaaagagtttcaagtttaggccaaggagaa |
310 |
Q |
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| T |
26985908 |
ttggaatggaggtatcatggacctccacattgccaacatatgatgaaaatgttgaccggtgagtcgacacaaaagagtttcaagtttaggccaaggagaa |
26986007 |
T |
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| Q |
311 |
tgaggagtgttatgggtgaccgtttgattgttgaaggatgggaagatgtgggggagtattgggtgcatgtgtggagggtcaaggatgggattattactca |
410 |
Q |
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| T |
26986008 |
tgaggagtgttatgggtgaccgtttgattgttgaaggatgggaagatgtgggggagtattgggtacatgtgtggagggtcaaggatgggattattactca |
26986107 |
T |
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| Q |
411 |
gctacgtgagtatttcaacactctgctcactgtggtttctgaggatggaaatgagggtaggctttggaggagtactccttgggctagggttcaaggatcc |
510 |
Q |
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| T |
26986108 |
gctacgtgagtatttcaacactttgctcactgtggtttctgaggatggaaatgagggtaggctttggaggagtactccttgggctagggttcaaggatcc |
26986207 |
T |
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| Q |
511 |
ttgcctgatcttgtgctttc |
530 |
Q |
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| T |
26986208 |
ttgcctgatcttgtgctttc |
26986227 |
T |
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