View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10080_low_14 (Length: 460)

Name: NF10080_low_14
Description: NF10080
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10080_low_14
NF10080_low_14
[»] chr1 (7 HSPs)
chr1 (65-446)||(36779568-36779957)
chr1 (199-267)||(2223377-2223445)
chr1 (199-316)||(37413237-37413365)
chr1 (16-64)||(36780017-36780065)
chr1 (199-267)||(9110733-9110801)
chr1 (192-319)||(10039504-10039636)
chr1 (199-267)||(37297177-37297247)
[»] chr2 (6 HSPs)
chr2 (199-316)||(32473208-32473335)
chr2 (192-316)||(40956905-40957040)
chr2 (199-267)||(33124880-33124949)
chr2 (257-311)||(23997258-23997312)
chr2 (192-258)||(26153169-26153235)
chr2 (214-267)||(34809238-34809290)
[»] chr8 (3 HSPs)
chr8 (192-320)||(38188463-38188601)
chr8 (266-316)||(22809903-22809953)
chr8 (224-311)||(3565623-3565711)
[»] chr7 (3 HSPs)
chr7 (199-323)||(7990726-7990860)
chr7 (220-256)||(42429315-42429351)
chr7 (214-258)||(24039435-24039479)
[»] chr3 (6 HSPs)
chr3 (199-314)||(17526520-17526629)
chr3 (198-267)||(45517844-45517913)
chr3 (272-322)||(42677493-42677543)
chr3 (194-267)||(3447837-3447910)
chr3 (220-256)||(23779210-23779246)
chr3 (282-314)||(40382733-40382765)
[»] chr6 (5 HSPs)
chr6 (200-316)||(34122309-34122435)
chr6 (255-311)||(1867696-1867752)
chr6 (270-305)||(2511657-2511692)
chr6 (206-267)||(14713592-14713653)
chr6 (199-267)||(30437961-30438030)
[»] chr4 (3 HSPs)
chr4 (203-316)||(13718930-13719053)
chr4 (199-267)||(859309-859375)
chr4 (192-267)||(759130-759206)
[»] chr5 (1 HSPs)
chr5 (191-267)||(27642842-27642919)
[»] scaffold0638 (1 HSPs)
scaffold0638 (224-256)||(7797-7829)


Alignment Details
Target: chr1 (Bit Score: 251; Significance: 1e-139; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 65 - 446
Target Start/End: Complemental strand, 36779957 - 36779568
Alignment:
Q  65 tgtggatatcacaaaatcccctaagtaactataaggcaaacattact-aagaaagnnnnnnnnctataagtcaagcataaataatggttttgttattcaa 163  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| || |||          |||||| |||||||||||||||||||||||||||||    
T  36779957 tgtggatatcacaaaatccgctaagtaactataaggcaaacattactcaaaaaaaaaaaaaaattataaggcaagcataaataatggttttgttattcaa 36779858  T
Q  164 ctgaagcatgataaattcttttttggtcttagacgcacacataattgaacaaaattaaagaaaaaataattgaatgatatgactaaattcttttttatct 263  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |    
T  36779857 ctgaagcatgataaattcttttttggtcttagatgcacacataattgaacaaaattaaagaaaaaataattaaatgatatgactaaattcttttttattt 36779758  T
Q  264 attt---------atgtgagtgtgtccaaaccctttttatttatatttgtgttcaagcaagtttttctccac-gagtaaatagcacattactactatttg 353  Q
    ||||         ||||||||||||| |||||||||||||||||||||||| |||||||| ||||||||| | ||||||||| ||||||||| |||||||    
T  36779757 attttctctacttatgtgagtgtgtcaaaaccctttttatttatatttgtgctcaagcaaatttttctccgccgagtaaataacacattactgctatttg 36779658  T
Q  354 tatttgtagatcctcgtgtcattccaattagattgtgtcaacgtggtaatgtaccatgggaacttgagcgcaatgtgtcatttggtaggaact 446  Q
    |   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36779657 t---tgtagatcctcgtgtcattccaattagattgtgtcaacgtggtaatgtaccatgggaacttgagcgcaatgtgtcatttggtaggaact 36779568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 199 - 267
Target Start/End: Original strand, 2223377 - 2223445
Alignment:
Q  199 cacacataattgaacaaaattaaagaaaaaataattgaatgatatgactaaattcttttttatctattt 267  Q
    |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  2223377 cacacataattgaataaaattaaagaaaaaataattgaatgatataactaaattcttttttatttattt 2223445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 199 - 316
Target Start/End: Original strand, 37413237 - 37413365
Alignment:
Q  199 cacacataattgaacaaaa-ttaaagaaaaaataattgaatgatatgactaaattctt----------ttttatctatttatgtgagtgtgtccaaaccc 287  Q
    ||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||          |||| |||| ||||||||||||| | |||||     
T  37413237 cacacataattgaacaaaaattaaagaaaaaataattaaataatatgactaaattctttttcatttaattttctctacttatgtgagtgtgcctaaacct 37413336  T
Q  288 tttttatttatatttgtgttcaagcaagt 316  Q
    ||||||||| |||||||||||||||||||    
T  37413337 tttttatttgtatttgtgttcaagcaagt 37413365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 16 - 64
Target Start/End: Complemental strand, 36780065 - 36780017
Alignment:
Q  16 acacgctattattctcaacaaaatttacatgtgcatatttgcatatata 64  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||    
T  36780065 acacgctattattctcaataaaatttacatgtgtatatttgcatatata 36780017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 199 - 267
Target Start/End: Complemental strand, 9110801 - 9110733
Alignment:
Q  199 cacacataattgaacaaaattaaagaaaaaataattgaatgatatgactaaattcttttttatctattt 267  Q
    |||| ||||||||||||||||| |||||||| |||||||| |||||| |||||| ||||| || |||||    
T  9110801 cacatataattgaacaaaattatagaaaaaacaattgaataatatgattaaattttttttcatttattt 9110733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 192 - 319
Target Start/End: Original strand, 10039504 - 10039636
Alignment:
Q  192 ttagacgcacacataattgaacaaaattaaagaaaaaataattgaatgatatgactaaattcttttttatctatttat-----gtgagtgtgtccaaacc 286  Q
    |||||| |||| ||||||||||||||||| |||||||||||| |||| ||||| |||||   ||||| || ||||| |      ||| ||||| ||||||    
T  10039504 ttagacacacaaataattgaacaaaattacagaaaaaataatagaataatatggctaaaaattttttcatttatttttcgctactgaatgtgttcaaacc 10039603  T
Q  287 ctttttatttatatttgtgttcaagcaagtttt 319  Q
    | |||||||| |||||||||||||  |||||||    
T  10039604 cattttatttgtatttgtgttcaaaaaagtttt 10039636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 199 - 267
Target Start/End: Complemental strand, 37297247 - 37297177
Alignment:
Q  199 cacacataattgaacaaaattaaagaaaaaa--taattgaatgatatgactaaattcttttttatctattt 267  Q
    ||||||||||  || ||||||||||||||||  ||||||||| |||||| |||||||||||| ||||||||    
T  37297247 cacacataatccaataaaattaaagaaaaaaaataattgaataatatgattaaattctttttcatctattt 37297177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 69; Significance: 9e-31; HSPs: 6)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 199 - 316
Target Start/End: Complemental strand, 32473335 - 32473208
Alignment:
Q  199 cacacataattgaacaaaattaaagaaaaaataattgaatgatatgactaaattcttttttatctattt----------atgtgagtgtgtccaaaccct 288  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| | |||||||||||| || |||||          |||||||||||||||||||||    
T  32473335 cacacataattgaacaaaattaaagaaaaaataattgaaagatataattaaattctttttcatttatttttttttatttatgtgagtgtgtccaaaccct 32473236  T
Q  289 ttttatttatatttgtgttcaagcaagt 316  Q
    |||||||| |||||||||||||||||||    
T  32473235 ttttatttttatttgtgttcaagcaagt 32473208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 192 - 316
Target Start/End: Complemental strand, 40957040 - 40956905
Alignment:
Q  192 ttagacgcacacataattgaacaaaattaaagaaaaaataattgaatgatatgactaaattct----------tttttatctatttatgtgagtgtgtcc 281  Q
    |||||| |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||          ||||| |||| || ||||||||||  |    
T  40957040 ttagacacacacataattgaataaaattaaagaaaagataattgaatgatatgactaaattctttttcaattatttttctctacttgtgtgagtgtgctc 40956941  T
Q  282 aaaccc-tttttatttatatttgtgttcaagcaagt 316  Q
    |||||| ||||||||| |||||||||||||||||||    
T  40956940 aaacccttttttatttgtatttgtgttcaagcaagt 40956905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 199 - 267
Target Start/End: Complemental strand, 33124949 - 33124880
Alignment:
Q  199 cacacataattgaacaaaattaaag-aaaaaataattgaatgatatgactaaattcttttttatctattt 267  Q
    ||||||||||||||||||||| ||| ||||||| || ||||||||||||| |||||||||| || |||||    
T  33124949 cacacataattgaacaaaattcaagaaaaaaatgatagaatgatatgacttaattctttttaatttattt 33124880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 311
Target Start/End: Original strand, 23997258 - 23997312
Alignment:
Q  257 tttatctatttatgtgagtgtgtccaaaccctttttatttatatttgtgttcaag 311  Q
    |||||| |||||||||||||| ||||||| | ||| |||||||||||||||||||    
T  23997258 tttatccatttatgtgagtgtttccaaacacatttcatttatatttgtgttcaag 23997312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 192 - 258
Target Start/End: Complemental strand, 26153235 - 26153169
Alignment:
Q  192 ttagacgcacacataattgaacaaaattaaagaaaaaataattgaatgatatgactaaattcttttt 258  Q
    |||||| |||| ||| ||||| ||||||||||||||| ||||| ||| ||||||||||||| |||||    
T  26153235 ttagacacacaaatagttgaataaaattaaagaaaaagtaattaaataatatgactaaatttttttt 26153169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 214 - 267
Target Start/End: Original strand, 34809238 - 34809290
Alignment:
Q  214 aaaattaaagaaaaaataattgaatgatatgactaaattcttttttatctattt 267  Q
    |||||||||||||||| |||| ||||||||||||||||||||||| || |||||    
T  34809238 aaaattaaagaaaaaa-aattaaatgatatgactaaattctttttcatttattt 34809290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 64; Significance: 8e-28; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 192 - 320
Target Start/End: Original strand, 38188463 - 38188601
Alignment:
Q  192 ttagacgcacacataattgaacaaaattaaagaaaaaataattgaatgatatgactaaattct----------tttttatctatttatgtgagtgtgtcc 281  Q
    |||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||          ||||| |||| ||||||||||||| ||    
T  38188463 ttagacacacacataattaaacaaaattgaagaaaaaataattgaatgatatgactaaattcttttctatttatttttctctaattatgtgagtgtgccc 38188562  T
Q  282 aaaccctttttatttatatttgtgttcaagcaagttttt 320  Q
    ||||  ||||||||||||||| ||||||||||| |||||    
T  38188563 aaactttttttatttatatttctgttcaagcaaattttt 38188601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 266 - 316
Target Start/End: Original strand, 22809903 - 22809953
Alignment:
Q  266 ttatgtgagtgtgtccaaaccctttttatttatatttgtgttcaagcaagt 316  Q
    |||| ||||||||| |||||| ||||||||| |||||||||||||||||||    
T  22809903 ttatatgagtgtgttcaaaccatttttatttgtatttgtgttcaagcaagt 22809953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 224 - 311
Target Start/End: Original strand, 3565623 - 3565711
Alignment:
Q  224 aaaaaataattgaatgatatgactaaattcttttttatctatttatg--tgagtgtgtccaaaccctttttatttatatttgtgttcaag 311  Q
    ||||||||||| |||||| |||||||||||||| | || ||||| ||  |||||||| | |||| | ||| |||||||||||||||||||    
T  3565623 aaaaaataattaaatgatttgactaaattctttatcatttattt-tgcttgagtgtgacgaaacacatttcatttatatttgtgttcaag 3565711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 60; Significance: 2e-25; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 199 - 323
Target Start/End: Original strand, 7990726 - 7990860
Alignment:
Q  199 cacacataattgaacaaaattaaagaaaaaataattgaatgatatgactaaattct----------tttttatctatttatgtgagtgtgtccaaaccct 288  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | |||| |||          ||||| |||| || ||||||||||  |||||| |    
T  7990726 cacacataattgaacaaaattaaagaaaaaataattgaatgatataagtaaaatctttttcatttatttttctctacttgtgtgagtgtgctcaaacctt 7990825  T
Q  289 ttttatttatatttgtgttcaagcaagtttttctc 323  Q
    |||||||| ||||||||||||||||||||||||||    
T  7990826 ttttatttgtatttgtgttcaagcaagtttttctc 7990860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 42429315 - 42429351
Alignment:
Q  220 aaagaaaaaataattgaatgatatgactaaattcttt 256  Q
    |||||||||||||||||||||| ||||||||||||||    
T  42429315 aaagaaaaaataattgaatgatgtgactaaattcttt 42429351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 214 - 258
Target Start/End: Original strand, 24039435 - 24039479
Alignment:
Q  214 aaaattaaagaaaaaataattgaatgatatgactaaattcttttt 258  Q
    |||||||||||||||||||||| ||||  |||||||||| |||||    
T  24039435 aaaattaaagaaaaaataattgcatgaggtgactaaatttttttt 24039479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 53; Significance: 3e-21; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 199 - 314
Target Start/End: Complemental strand, 17526629 - 17526520
Alignment:
Q  199 cacacataattgaacaaaattaaagaaaaaataattgaatgatatgactaaattcttttttatctatttatgtgagtgtgtccaaaccctttttatttat 298  Q
    |||| ||||||||||||||||||||||||||||||||||||||||      |||  ||||| |||||||||||||||||| | ||| | ||||| ||| |    
T  17526629 cacatataattgaacaaaattaaagaaaaaataattgaatgatat------atttatttttctctatttatgtgagtgtgcctaaatcttttttgtttgt 17526536  T
Q  299 atttgtgttcaagcaa 314  Q
    ||||||||||||||||    
T  17526535 atttgtgttcaagcaa 17526520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 198 - 267
Target Start/End: Complemental strand, 45517913 - 45517844
Alignment:
Q  198 gcacacataattgaacaaaattaaagaaaaaataattgaatgatatgactaaattcttttttatctattt 267  Q
    |||||||||||||||||||||||||||||||||||| |||  |||| |||||||||||||| || |||||    
T  45517913 gcacacataattgaacaaaattaaagaaaaaataatcgaagcatataactaaattctttttcatttattt 45517844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 272 - 322
Target Start/End: Original strand, 42677493 - 42677543
Alignment:
Q  272 gagtgtgtccaaaccctttttatttatatttgtgttcaagcaagtttttct 322  Q
    |||||||| |||||||||||||||||||||| ||||||| ||||| |||||    
T  42677493 gagtgtgttcaaaccctttttatttatatttatgttcaaacaagtctttct 42677543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 267
Target Start/End: Original strand, 3447837 - 3447910
Alignment:
Q  194 agacgcacacataattgaacaaaattaaagaaaaaataattgaatgatatgactaaattcttttttatctattt 267  Q
    |||| |||||||||||||| ||||||||||||| |||||  |||| |||| |||||| | || ||||| |||||    
T  3447837 agactcacacataattgaataaaattaaagaaagaataaccgaataatataactaaaattttatttatttattt 3447910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 23779210 - 23779246
Alignment:
Q  220 aaagaaaaaataattgaatgatatgactaaattcttt 256  Q
    ||||||||||||||||||||||  |||||||||||||    
T  23779210 aaagaaaaaataattgaatgatgggactaaattcttt 23779246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 282 - 314
Target Start/End: Complemental strand, 40382765 - 40382733
Alignment:
Q  282 aaaccctttttatttatatttgtgttcaagcaa 314  Q
    ||||| |||||||||||||||||||||||||||    
T  40382765 aaaccttttttatttatatttgtgttcaagcaa 40382733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 52; Significance: 1e-20; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 200 - 316
Target Start/End: Complemental strand, 34122435 - 34122309
Alignment:
Q  200 acacataattgaacaaaattaaagaaaaaataattgaatgatatgactaaattct----------tttttatctatttatgtgagtgtgtccaaaccctt 289  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||          ||||| |||| || |||||||||| |||||| |||    
T  34122435 acacataattgaataaaattaaagaaaaaataattgaatgatatgagtaaattctttttcaattatttttttctacttgtgtgagtgtgcccaaactctt 34122336  T
Q  290 tttatttatatttgtgttcaagcaagt 316  Q
    |||||||  ||||||||||||| ||||    
T  34122335 tttatttgcatttgtgttcaagaaagt 34122309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 255 - 311
Target Start/End: Original strand, 1867696 - 1867752
Alignment:
Q  255 tttttatctatttatgtgagtgtgtccaaaccctttttatttatatttgtgttcaag 311  Q
    ||||| || ||||||||||||||||||||||   ||| |||||||||||||||||||    
T  1867696 tttttctccatttatgtgagtgtgtccaaacatatttcatttatatttgtgttcaag 1867752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 305
Target Start/End: Complemental strand, 2511692 - 2511657
Alignment:
Q  270 gtgagtgtgtccaaaccctttttatttatatttgtg 305  Q
    |||||||||||||||| |||||||||||||||||||    
T  2511692 gtgagtgtgtccaaacactttttatttatatttgtg 2511657  T

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Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 267
Target Start/End: Complemental strand, 14713653 - 14713592
Alignment:
Q  206 aattgaacaaaattaaagaaaaaataattgaatgatatgactaaattcttttttatctattt 267  Q
    ||||||| ||| | ||||||||||||||| |||||  |||||||||||||||| || |||||    
T  14713653 aattgaaaaaattaaaagaaaaaataattaaatgaagtgactaaattctttttcatttattt 14713592  T

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Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 267
Target Start/End: Original strand, 30437961 - 30438030
Alignment:
Q  199 cacacataa-ttgaacaaaattaaagaaaaaataattgaatgatatgactaaattcttttttatctattt 267  Q
    ||||||||| ||||| ||| | ||||| |||||||| ||||||| |||||||||||||||| || |||||    
T  30437961 cacacataagttgaaaaaattaaaagagaaaataatcgaatgatgtgactaaattctttttcatttattt 30438030  T

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Target: chr4 (Bit Score: 49; Significance: 7e-19; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 203 - 316
Target Start/End: Complemental strand, 13719053 - 13718930
Alignment:
Q  203 cataattgaacaaaattaaagaaaaaataattgaatgatatgactaaattct----------tttttatctatttatgtgagtgtgtccaaacccttttt 292  Q
    |||||||||| ||||||||||||||||||||| |||||||||| || |||||          ||||| |||| || |||||||||||||||||| |||||    
T  13719053 cataattgaataaaattaaagaaaaaataattaaatgatatgattacattctttttcatttatttttctctacttgtgtgagtgtgtccaaacctttttt 13718954  T
Q  293 atttatatttgtgttcaagcaagt 316  Q
    |||| |||||||||||||| ||||    
T  13718953 atttgtatttgtgttcaagtaagt 13718930  T

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Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 199 - 267
Target Start/End: Original strand, 859309 - 859375
Alignment:
Q  199 cacacataattgaacaaaattaaagaaaaaataattgaatgatatgactaaattcttttttatctattt 267  Q
    |||||||||||||| ||||||||||||||  ||||||||| ||||||||||||||||||| || |||||    
T  859309 cacacataattgaataaaattaaagaaaa--taattgaattatatgactaaattctttttcatttattt 859375  T

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Target: chr4; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 192 - 267
Target Start/End: Complemental strand, 759206 - 759130
Alignment:
Q  192 ttagacgcacacataa-ttgaacaaaattaaagaa-aaaataattgaatgatatgactaaattcttttttatctattt 267  Q
    |||||| ||||||||| ||||| ||||||||| || |||||||||||||||| ||| |||||||||| |||| |||||    
T  759206 ttagacacacacataaattgaa-aaaattaaaaaagaaaataattgaatgatgtgattaaattctttcttatttattt 759130  T

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Target: chr5 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 191 - 267
Target Start/End: Complemental strand, 27642919 - 27642842
Alignment:
Q  191 cttagacgcacacataattgaacaaaattaaagaaa-aaataattgaatgatatgactaaattcttttttatctattt 267  Q
    ||||||| |||||||||||||||||||||||| ||| ||||||||||||||||| | |||||||||||| || |||||    
T  27642919 cttagacacacacataattgaacaaaattaaaaaaataaataattgaatgatataagtaaattctttttcatttattt 27642842  T

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Target: scaffold0638 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0638
Description:

Target: scaffold0638; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 224 - 256
Target Start/End: Original strand, 7797 - 7829
Alignment:
Q  224 aaaaaataattgaatgatatgactaaattcttt 256  Q
    |||||||||||||||||| ||||||||||||||    
T  7797 aaaaaataattgaatgatgtgactaaattcttt 7829  T

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