View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10080_low_36 (Length: 328)

Name: NF10080_low_36
Description: NF10080
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10080_low_36
NF10080_low_36
[»] chr8 (59 HSPs)
chr8 (1-312)||(8153562-8153864)
chr8 (1-222)||(30291483-30291713)
chr8 (65-240)||(40320940-40321115)
chr8 (2-245)||(15212654-15212891)
chr8 (1-166)||(4731592-4731764)
chr8 (1-154)||(8965753-8965914)
chr8 (1-240)||(43036296-43036529)
chr8 (1-167)||(18141753-18141926)
chr8 (1-240)||(27811151-27811384)
chr8 (1-240)||(33352023-33352256)
chr8 (1-167)||(3303732-3303905)
chr8 (1-245)||(42498062-42498300)
chr8 (1-166)||(1292525-1292697)
chr8 (1-156)||(4283468-4283630)
chr8 (65-166)||(31218191-31218292)
chr8 (1-245)||(30143210-30143446)
chr8 (1-152)||(18655348-18655506)
chr8 (1-156)||(44353736-44353899)
chr8 (70-166)||(6598906-6599002)
chr8 (70-166)||(6674359-6674455)
chr8 (121-270)||(7597444-7597593)
chr8 (65-166)||(17982587-17982688)
chr8 (65-144)||(34254464-34254542)
chr8 (83-166)||(44303788-44303869)
chr8 (1-156)||(42435053-42435215)
chr8 (83-245)||(12702791-12702938)
chr8 (1-166)||(1345433-1345605)
chr8 (65-166)||(1746351-1746452)
chr8 (88-160)||(4743360-4743431)
chr8 (83-166)||(19945513-19945594)
chr8 (65-144)||(34256640-34256718)
chr8 (1-167)||(4162433-4162603)
chr8 (1-156)||(40221689-40221851)
chr8 (1-167)||(5689204-5689377)
chr8 (1-158)||(19491761-19491924)
chr8 (1-129)||(3772162-3772298)
chr8 (1-158)||(9765691-9765851)
chr8 (68-166)||(41364983-41365081)
chr8 (62-270)||(3231927-3232137)
chr8 (2-156)||(11383930-11384090)
chr8 (88-165)||(18106235-18106311)
chr8 (110-269)||(32902353-32902512)
chr8 (1-156)||(40328723-40328886)
chr8 (1-156)||(10930261-10930423)
chr8 (70-155)||(41366752-41366837)
chr8 (62-172)||(41266896-41267006)
chr8 (108-173)||(1872086-1872151)
chr8 (182-239)||(4733683-4733740)
chr8 (90-166)||(10929734-10929808)
chr8 (194-270)||(29796572-29796648)
chr8 (186-245)||(11712244-11712303)
chr8 (182-270)||(5689113-5689202)
chr8 (69-129)||(7444955-7445016)
chr8 (62-99)||(15290522-15290559)
chr8 (62-99)||(15470891-15470928)
chr8 (182-223)||(41365084-41365125)
chr8 (182-222)||(1292700-1292740)
chr8 (1-56)||(18106141-18106197)
chr8 (169-245)||(19948545-19948621)
[»] chr7 (72 HSPs)
chr7 (1-270)||(36146470-36146748)
chr7 (65-270)||(12097992-12098198)
chr7 (65-270)||(41317567-41317773)
chr7 (1-166)||(47674005-47674177)
chr7 (1-245)||(8153197-8153448)
chr7 (2-166)||(31733032-31733203)
chr7 (1-166)||(1113591-1113763)
chr7 (1-166)||(47676198-47676370)
chr7 (1-245)||(43864112-43864350)
chr7 (1-156)||(2361034-2361196)
chr7 (1-144)||(30024794-30024945)
chr7 (65-266)||(30843366-30843568)
chr7 (62-258)||(4253660-4253844)
chr7 (1-166)||(48491513-48491685)
chr7 (1-166)||(4586095-4586267)
chr7 (1-166)||(26417250-26417422)
chr7 (1-166)||(27347751-27347923)
chr7 (1-166)||(23554974-23555146)
chr7 (65-166)||(29990989-29991088)
chr7 (1-166)||(14069895-14070067)
chr7 (1-166)||(14379923-14380095)
chr7 (1-166)||(35853849-35854020)
chr7 (1-166)||(38671284-38671456)
chr7 (65-166)||(4178709-4178809)
chr7 (70-244)||(5514148-5514321)
chr7 (62-167)||(24526027-24526132)
chr7 (1-156)||(29608680-29608843)
chr7 (4-167)||(31518728-31518898)
chr7 (65-166)||(48489365-48489466)
chr7 (65-165)||(4538673-4538773)
chr7 (1-159)||(18126585-18126750)
chr7 (2-167)||(23343907-23344080)
chr7 (4-156)||(4508771-4508930)
chr7 (83-166)||(24514913-24514994)
chr7 (68-166)||(41649146-41649244)
chr7 (83-170)||(48408733-48408818)
chr7 (69-166)||(2761439-2761536)
chr7 (1-156)||(8359378-8359541)
chr7 (3-144)||(31105457-31105606)
chr7 (1-156)||(6431915-6432077)
chr7 (1-166)||(19502112-19502284)
chr7 (1-152)||(22269920-22270079)
chr7 (1-156)||(34310778-34310940)
chr7 (1-156)||(48599396-48599558)
chr7 (1-166)||(496045-496217)
chr7 (88-167)||(36574672-36574751)
chr7 (1-156)||(3258938-3259101)
chr7 (1-156)||(4510610-4510772)
chr7 (1-156)||(4512452-4512614)
chr7 (1-168)||(23565123-23565298)
chr7 (7-156)||(2390226-2390382)
chr7 (182-245)||(30024969-30025032)
chr7 (107-170)||(39731307-39731368)
chr7 (62-243)||(3904748-3904927)
chr7 (120-300)||(18396114-18396294)
chr7 (102-156)||(22328568-22328622)
chr7 (97-155)||(25767124-25767180)
chr7 (182-246)||(14070070-14070134)
chr7 (182-246)||(14380098-14380162)
chr7 (1-66)||(32358116-32358182)
chr7 (182-233)||(4538777-4538828)
chr7 (182-237)||(18126520-18126575)
chr7 (182-245)||(19502046-19502109)
chr7 (107-166)||(25615797-25615855)
chr7 (182-245)||(47676373-47676436)
chr7 (182-240)||(1113530-1113588)
chr7 (1-56)||(2759259-2759316)
chr7 (1-56)||(6360014-6360071)
chr7 (62-99)||(6594690-6594727)
chr7 (62-99)||(18388892-18388929)
chr7 (62-99)||(18392328-18392365)
chr7 (62-99)||(32060456-32060493)
[»] chr3 (74 HSPs)
chr3 (62-270)||(29196517-29196726)
chr3 (1-270)||(44700540-44700817)
chr3 (83-270)||(2075209-2075395)
chr3 (2-166)||(5236519-5236690)
chr3 (1-210)||(31314335-31314551)
chr3 (1-166)||(40734432-40734604)
chr3 (1-166)||(45095099-45095269)
chr3 (1-166)||(44331479-44331651)
chr3 (1-156)||(4569895-4570058)
chr3 (62-156)||(5434007-5434102)
chr3 (1-166)||(7762200-7762371)
chr3 (1-245)||(53921565-53921803)
chr3 (1-240)||(40735256-40735489)
chr3 (1-166)||(19683951-19684123)
chr3 (1-165)||(7764403-7764570)
chr3 (1-167)||(32891036-32891210)
chr3 (1-160)||(51398754-51398920)
chr3 (1-156)||(54593648-54593810)
chr3 (1-166)||(760781-760953)
chr3 (65-166)||(5258277-5258378)
chr3 (88-156)||(9666624-9666692)
chr3 (1-166)||(22835064-22835236)
chr3 (1-166)||(29810802-29810974)
chr3 (1-166)||(37408393-37408564)
chr3 (1-166)||(39153423-39153595)
chr3 (1-156)||(43401863-43402026)
chr3 (1-166)||(9581217-9581388)
chr3 (1-156)||(34491157-34491318)
chr3 (1-156)||(46860416-46860580)
chr3 (1-156)||(30236069-30236231)
chr3 (70-166)||(29682293-29682389)
chr3 (6-156)||(31340268-31340425)
chr3 (65-166)||(5260456-5260557)
chr3 (70-169)||(23392047-23392146)
chr3 (93-169)||(23410491-23410566)
chr3 (1-156)||(43403806-43403969)
chr3 (1-156)||(49199531-49199694)
chr3 (65-160)||(9636259-9636354)
chr3 (69-170)||(23198076-23198175)
chr3 (69-170)||(23200275-23200374)
chr3 (65-156)||(6095732-6095823)
chr3 (1-166)||(16498964-16499135)
chr3 (1-240)||(29812936-29813169)
chr3 (65-156)||(41819656-41819748)
chr3 (62-240)||(51352241-51352423)
chr3 (6-156)||(36018795-36018954)
chr3 (68-129)||(26386617-26386679)
chr3 (68-138)||(26323210-26323281)
chr3 (1-155)||(46173311-46173463)
chr3 (182-240)||(51398687-51398745)
chr3 (182-239)||(7762140-7762197)
chr3 (182-246)||(5236693-5236757)
chr3 (65-156)||(47304195-47304286)
chr3 (182-245)||(9666705-9666768)
chr3 (182-245)||(32744663-32744726)
chr3 (182-240)||(7764341-7764399)
chr3 (182-224)||(26386718-26386760)
chr3 (182-224)||(29810757-29810799)
chr3 (120-173)||(1313994-1314047)
chr3 (62-99)||(3617449-3617486)
chr3 (62-99)||(4598656-4598693)
chr3 (62-99)||(4600877-4600914)
chr3 (108-173)||(8166635-8166700)
chr3 (62-99)||(10056217-10056254)
chr3 (62-99)||(10058439-10058476)
chr3 (62-99)||(10060661-10060698)
chr3 (62-99)||(10062883-10062920)
chr3 (62-99)||(10065105-10065142)
chr3 (62-99)||(10067327-10067364)
chr3 (62-99)||(10209173-10209210)
chr3 (62-99)||(10211393-10211430)
chr3 (62-99)||(25637426-25637463)
chr3 (70-138)||(35138844-35138913)
chr3 (110-166)||(32744606-32744660)
[»] chr2 (45 HSPs)
chr2 (1-269)||(36773392-36773668)
chr2 (1-276)||(13121591-13121873)
chr2 (62-245)||(11049405-11049587)
chr2 (1-212)||(7815335-7815554)
chr2 (1-166)||(38312174-38312346)
chr2 (1-166)||(2334480-2334651)
chr2 (1-166)||(5723318-5723488)
chr2 (65-166)||(29867803-29867904)
chr2 (65-166)||(34139904-34140005)
chr2 (1-166)||(17057431-17057603)
chr2 (1-166)||(17085414-17085586)
chr2 (1-166)||(42362286-42362458)
chr2 (6-246)||(11067159-11067406)
chr2 (1-240)||(33162512-33162745)
chr2 (1-160)||(36318071-36318237)
chr2 (1-166)||(723806-723978)
chr2 (68-166)||(11690435-11690533)
chr2 (65-240)||(39284758-39284920)
chr2 (1-156)||(1631794-1631956)
chr2 (65-166)||(36205797-36205897)
chr2 (1-245)||(36988138-36988375)
chr2 (65-166)||(4503265-4503366)
chr2 (65-166)||(45099689-45099790)
chr2 (68-166)||(14633962-14634060)
chr2 (69-166)||(11151728-11151825)
chr2 (1-156)||(35446946-35447108)
chr2 (1-158)||(45726871-45727035)
chr2 (89-156)||(17450534-17450601)
chr2 (1-125)||(17490210-17490336)
chr2 (83-160)||(5700274-5700351)
chr2 (1-245)||(6595068-6595306)
chr2 (68-159)||(24885602-24885693)
chr2 (2-156)||(42288173-42288334)
chr2 (65-170)||(4484464-4484568)
chr2 (88-166)||(12123741-12123819)
chr2 (65-160)||(30833286-30833380)
chr2 (108-166)||(14202584-14202641)
chr2 (88-156)||(24397997-24398066)
chr2 (182-245)||(2334654-2334717)
chr2 (182-245)||(38312108-38312171)
chr2 (182-240)||(36318246-36318304)
chr2 (140-300)||(4560906-4561065)
chr2 (62-99)||(12647518-12647555)
chr2 (62-99)||(13656163-13656200)
chr2 (140-172)||(28671857-28671889)
[»] chr1 (66 HSPs)
chr1 (1-270)||(28265616-28265892)
chr1 (1-270)||(50167237-50167514)
chr1 (1-166)||(37503619-37503788)
chr1 (1-166)||(196970-197142)
chr1 (1-166)||(1833456-1833628)
chr1 (1-166)||(49918283-49918456)
chr1 (2-169)||(4552700-4552874)
chr1 (1-245)||(31659106-31659344)
chr1 (1-240)||(3156739-3156971)
chr1 (12-166)||(10925157-10925318)
chr1 (1-166)||(3847183-3847355)
chr1 (1-167)||(13138038-13138209)
chr1 (1-245)||(28223483-28223721)
chr1 (1-160)||(44455100-44455266)
chr1 (1-166)||(834229-834401)
chr1 (1-156)||(19754438-19754601)
chr1 (1-156)||(37168241-37168404)
chr1 (1-156)||(11348642-11348804)
chr1 (1-245)||(28220288-28220526)
chr1 (1-156)||(42298037-42298199)
chr1 (1-160)||(50169272-50169438)
chr1 (1-155)||(13547151-13547312)
chr1 (62-165)||(928107-928211)
chr1 (1-240)||(3189204-3189436)
chr1 (1-240)||(3198021-3198253)
chr1 (1-240)||(3206860-3207092)
chr1 (1-156)||(193555-193717)
chr1 (1-155)||(13549062-13549223)
chr1 (1-166)||(8550849-8551021)
chr1 (65-166)||(20762606-20762707)
chr1 (3-156)||(29136191-29136351)
chr1 (1-156)||(37033134-37033297)
chr1 (62-270)||(8871179-8871386)
chr1 (117-268)||(777073-777225)
chr1 (1-167)||(46064851-46065024)
chr1 (1-136)||(16455585-16455727)
chr1 (1-156)||(19752629-19752792)
chr1 (1-166)||(23555327-23555499)
chr1 (65-156)||(37879044-37879135)
chr1 (1-167)||(45644416-45644590)
chr1 (1-166)||(15820241-15820413)
chr1 (62-160)||(37282823-37282920)
chr1 (62-156)||(44650294-44650388)
chr1 (1-156)||(47255402-47255564)
chr1 (1-158)||(41360857-41361020)
chr1 (65-156)||(47115115-47115206)
chr1 (1-144)||(31925769-31925919)
chr1 (3-156)||(34603519-34603681)
chr1 (1-166)||(13659398-13659570)
chr1 (65-166)||(30476579-30476682)
chr1 (69-166)||(37560006-37560103)
chr1 (1-156)||(7482292-7482456)
chr1 (88-160)||(40122355-40122426)
chr1 (62-128)||(44646915-44646981)
chr1 (182-246)||(15820174-15820238)
chr1 (182-245)||(10925091-10925154)
chr1 (182-245)||(13138211-13138274)
chr1 (182-245)||(37560106-37560169)
chr1 (182-245)||(49918217-49918280)
chr1 (110-156)||(25652029-25652075)
chr1 (182-240)||(37503791-37503849)
chr1 (99-160)||(1050612-1050672)
chr1 (62-99)||(44203631-44203668)
chr1 (182-239)||(44455034-44455091)
chr1 (134-170)||(11031301-11031337)
chr1 (65-170)||(51765326-51765429)
[»] chr6 (33 HSPs)
chr6 (9-270)||(3038973-3039240)
chr6 (1-245)||(9183093-9183331)
chr6 (62-269)||(4045257-4045460)
chr6 (1-166)||(28137470-28137642)
chr6 (1-158)||(5406262-5406424)
chr6 (1-158)||(5410587-5410749)
chr6 (1-170)||(2171594-2171768)
chr6 (1-156)||(5043571-5043733)
chr6 (1-156)||(21593608-21593770)
chr6 (1-156)||(17762933-17763096)
chr6 (1-157)||(26954348-26954510)
chr6 (1-166)||(31404737-31404907)
chr6 (1-156)||(2973001-2973163)
chr6 (65-158)||(5413527-5413618)
chr6 (1-156)||(3808770-3808933)
chr6 (65-166)||(16452462-16452563)
chr6 (6-166)||(33211252-33211419)
chr6 (1-114)||(21588916-21589037)
chr6 (65-166)||(30834669-30834770)
chr6 (3-166)||(33160416-33160587)
chr6 (1-156)||(26830185-26830348)
chr6 (1-127)||(17757995-17758129)
chr6 (88-156)||(603237-603304)
chr6 (107-166)||(16567140-16567198)
chr6 (6-156)||(22424892-22425052)
chr6 (107-166)||(16568977-16569035)
chr6 (182-245)||(26954522-26954585)
chr6 (62-99)||(6027246-6027283)
chr6 (62-99)||(13153913-13153950)
chr6 (62-99)||(25421305-25421342)
chr6 (62-99)||(33342238-33342275)
chr6 (62-99)||(34164856-34164893)
chr6 (62-99)||(34167078-34167115)
[»] chr4 (77 HSPs)
chr4 (66-245)||(37229857-37230036)
chr4 (4-245)||(36463454-36463702)
chr4 (1-240)||(54199968-54200201)
chr4 (62-270)||(45687313-45687522)
chr4 (1-166)||(5429613-5429785)
chr4 (1-166)||(26175698-26175870)
chr4 (1-246)||(9927520-9927758)
chr4 (1-166)||(24969045-24969218)
chr4 (1-168)||(31474082-31474257)
chr4 (1-166)||(34570476-34570648)
chr4 (1-158)||(48893700-48893868)
chr4 (1-166)||(56178699-56178870)
chr4 (65-166)||(52095495-52095596)
chr4 (1-156)||(54882964-54883126)
chr4 (1-166)||(47038473-47038643)
chr4 (1-156)||(50673909-50674070)
chr4 (68-167)||(52467490-52467590)
chr4 (1-240)||(48142915-48143149)
chr4 (1-144)||(36994479-36994630)
chr4 (83-169)||(51336995-51337080)
chr4 (1-169)||(4587889-4588065)
chr4 (1-138)||(3913409-3913554)
chr4 (65-245)||(52082790-52082957)
chr4 (68-166)||(5871754-5871852)
chr4 (68-166)||(13009567-13009665)
chr4 (1-156)||(35662384-35662547)
chr4 (1-240)||(37740499-37740731)
chr4 (1-167)||(5207904-5208078)
chr4 (62-169)||(6542310-6542418)
chr4 (65-166)||(12739683-12739784)
chr4 (65-166)||(12747889-12747990)
chr4 (65-166)||(29999940-30000039)
chr4 (1-156)||(2209657-2209820)
chr4 (1-156)||(6655900-6656062)
chr4 (69-166)||(29254428-29254525)
chr4 (1-156)||(40632389-40632551)
chr4 (1-156)||(46703443-46703607)
chr4 (62-173)||(29056284-29056395)
chr4 (65-152)||(55085498-55085585)
chr4 (1-156)||(8665351-8665514)
chr4 (1-156)||(12073336-12073498)
chr4 (65-166)||(12745569-12745670)
chr4 (2-167)||(48142440-48142614)
chr4 (65-166)||(5370217-5370320)
chr4 (1-127)||(27417027-27417160)
chr4 (65-166)||(53345150-53345251)
chr4 (1-156)||(379322-379486)
chr4 (2-156)||(21688192-21688354)
chr4 (1-112)||(26364223-26364342)
chr4 (2-152)||(8648086-8648244)
chr4 (186-270)||(6677310-6677394)
chr4 (88-156)||(12119481-12119549)
chr4 (182-245)||(52093901-52093964)
chr4 (1-156)||(41639370-41639532)
chr4 (107-160)||(13992462-13992513)
chr4 (1-115)||(46147453-46147575)
chr4 (181-245)||(26175872-26175936)
chr4 (84-156)||(26699598-26699670)
chr4 (65-156)||(41964358-41964450)
chr4 (1-66)||(50262763-50262829)
chr4 (182-245)||(5429547-5429610)
chr4 (182-245)||(46147592-46147655)
chr4 (182-245)||(52095599-52095662)
chr4 (182-245)||(52467592-52467655)
chr4 (182-245)||(56178873-56178936)
chr4 (100-166)||(5349840-5349905)
chr4 (182-240)||(12739787-12739845)
chr4 (182-240)||(12747993-12748051)
chr4 (186-269)||(21704069-21704154)
chr4 (62-99)||(5136063-5136100)
chr4 (62-99)||(5138288-5138325)
chr4 (62-99)||(7122682-7122719)
chr4 (62-99)||(7124901-7124938)
chr4 (186-238)||(6375950-6376002)
chr4 (186-238)||(24334087-24334139)
chr4 (184-270)||(39594000-39594085)
chr4 (65-156)||(41639207-41639298)
[»] scaffold0016 (1 HSPs)
scaffold0016 (1-245)||(114458-114708)
[»] chr5 (49 HSPs)
chr5 (1-166)||(13239686-13239857)
chr5 (1-166)||(39468611-39468783)
chr5 (1-166)||(533703-533875)
chr5 (4-247)||(9049407-9049657)
chr5 (1-166)||(42428492-42428664)
chr5 (62-245)||(13695822-13696004)
chr5 (1-166)||(25412696-25412866)
chr5 (1-240)||(13488076-13488309)
chr5 (65-245)||(28750788-28750955)
chr5 (1-156)||(213409-213571)
chr5 (1-156)||(40147205-40147367)
chr5 (1-155)||(42426297-42426458)
chr5 (1-166)||(537959-538131)
chr5 (1-245)||(30682984-30683220)
chr5 (69-166)||(5887553-5887650)
chr5 (65-166)||(30182523-30182623)
chr5 (1-166)||(8566008-8566180)
chr5 (65-166)||(13342995-13343096)
chr5 (1-166)||(33831614-33831786)
chr5 (62-156)||(16641068-16641165)
chr5 (83-166)||(36074197-36074278)
chr5 (1-156)||(5057991-5058151)
chr5 (1-156)||(28278260-28278422)
chr5 (68-166)||(31182907-31183004)
chr5 (68-166)||(3075794-3075892)
chr5 (68-166)||(19806318-19806415)
chr5 (65-166)||(32636758-32636859)
chr5 (88-166)||(42926827-42926904)
chr5 (1-167)||(42309997-42310170)
chr5 (1-156)||(38746949-38747111)
chr5 (88-169)||(37439065-37439144)
chr5 (65-156)||(27637746-27637838)
chr5 (186-273)||(3325752-3325840)
chr5 (1-166)||(16452015-16452186)
chr5 (65-156)||(27015476-27015566)
chr5 (107-170)||(16409413-16409474)
chr5 (107-170)||(26177821-26177882)
chr5 (182-245)||(39468786-39468849)
chr5 (182-237)||(42426472-42426527)
chr5 (182-240)||(533642-533700)
chr5 (182-240)||(13239625-13239683)
chr5 (107-165)||(26170717-26170773)
chr5 (62-99)||(16544407-16544444)
chr5 (62-99)||(25078120-25078157)
chr5 (62-99)||(25136089-25136126)
chr5 (62-99)||(40380090-40380127)
chr5 (6-56)||(42926916-42926968)
chr5 (194-246)||(5007418-5007470)
chr5 (189-245)||(37439016-37439072)
[»] scaffold0286 (1 HSPs)
scaffold0286 (1-156)||(11502-11663)
[»] scaffold0466 (1 HSPs)
scaffold0466 (1-152)||(7275-7433)
[»] scaffold1519 (1 HSPs)
scaffold1519 (65-166)||(851-951)
[»] scaffold0491 (2 HSPs)
scaffold0491 (65-170)||(11295-11399)
scaffold0491 (65-170)||(8869-8973)
[»] scaffold0176 (1 HSPs)
scaffold0176 (1-152)||(18066-18223)
[»] scaffold0002 (1 HSPs)
scaffold0002 (1-166)||(434467-434639)
[»] scaffold0066 (2 HSPs)
scaffold0066 (2-160)||(20478-20643)
scaffold0066 (182-240)||(20652-20710)
[»] scaffold0006 (1 HSPs)
scaffold0006 (1-166)||(149159-149331)
[»] scaffold0129 (1 HSPs)
scaffold0129 (109-167)||(19117-19174)
[»] scaffold0014 (1 HSPs)
scaffold0014 (1-152)||(80345-80503)
[»] scaffold0219 (1 HSPs)
scaffold0219 (120-268)||(27632-27781)
[»] scaffold0674 (1 HSPs)
scaffold0674 (62-99)||(3858-3895)
[»] scaffold0565 (1 HSPs)
scaffold0565 (62-99)||(2736-2773)
[»] scaffold0137 (1 HSPs)
scaffold0137 (62-99)||(6272-6309)


Alignment Details
Target: chr8 (Bit Score: 202; Significance: 1e-110; HSPs: 59)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 1 - 312
Target Start/End: Complemental strand, 8153864 - 8153562
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaaccctaatttctaccactttctcaatctcacca 98  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  8153864 ctatcaatgagttcttacaaagatatacaaaagagttacacgaatttagcttcaacaaagctcagaaaccctaatttctaccattttctcaatctcacca 8153765  T
Q  99 atgaacatg--acactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaacctctcaaaagagcattaatcaaagactctc 196  Q
    |||||||||  |||||||||||||||||||||  |||||||||||||||||||||||||||             ||||||| ||||||||||||||||||    
T  8153764 atgaacatgacacactcaatgattttcactcatccaaggtgtatacaaatgtttcccaacc-------------caaaagaacattaatcaaagactctc 8153678  T
Q  197 aaccctaaaattaccttatttgatttcctaactttctctctcttaaagccttcaaaaaacatgaagaatgaagcattttataatgtacaagatccgagaa 296  Q
    |||| |||||||||||  ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  8153677 aaccttaaaattacctcctttgatttcctaaatttctctctcttaaagccttcaaaaaacatgaagaatgaagccttttataatgtacaagatccgagaa 8153578  T
Q  297 aatcatgccccaaaat 312  Q
    |||| ||||| |||||    
T  8153577 aatcgtgcccgaaaat 8153562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 30291713 - 30291483
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaac-------cctaatttctacc-actttctcaa 90  Q
    ||||||| || |||||||||||  ||||||  |||||||| ||| ||||||||||||| |||||||||        ||||||||||||| | ||||||||    
T  30291713 ctatcaaagaattcttacaaagtgatacaaatgagttacaagaaattagcttcaacaa-gctcacaaagaacaaaacctaatttctacccattttctcaa 30291615  T
Q  91 tctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaacctctcaaaagagcattaatcaaag 190  Q
    ||||||||||||||| |||||||||||||||||| |||| |||||||| ||||||||||||||||||||| | |||| ||||| ||| |  |||||||||    
T  30291614 tctcaccaatgaacaagacactcaatgattttcaatcacccaaggtgtttacaaatgtttcccaacccaaaaaaacccctcaagagaaccctaatcaaag 30291515  T
Q  191 actctcaaccctaaaattaccttatttgattt 222  Q
    ||  ||||||||||| ||||||  ||||||||    
T  30291514 accatcaaccctaaagttacctcctttgattt 30291483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 65 - 240
Target Start/End: Complemental strand, 40321115 - 40320940
Alignment:
Q  65 aaccctaatttctacc-actttctcaatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatag 163  Q
    |||||||||||||||| | |||| |||||||||| ||||||| |||||||||||||||||| ||||||||||||| ||| ||||||||||||| ||| ||    
T  40321115 aaccctaatttctacccattttcccaatctcacctatgaacaagacactcaatgattttcagtcactcaaggtgtttac-aatgtttcccaactcaagag 40321017  T
Q  164 aacctctcaaaagagcattaatcaaagactctcaaccctaaaattaccttatttgatttcctaactttctctctctt 240  Q
    |||| ||||| ||| |  ||||||||||| |||||||| ||| ||||||  ||||||||||  | ||||||||||||    
T  40321016 aacccctcaagagaaccctaatcaaagaccctcaacccgaaagttacctcctttgatttccctagtttctctctctt 40320940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 2 - 245
Target Start/End: Complemental strand, 15212891 - 15212654
Alignment:
Q  2 tatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctacc-actttctcaatc 92  Q
    |||||||||||||||||||||| ||||||  | |||||| ||| ||||||||||||| | |||||||      |||||||||||||| | |||| |||||    
T  15212891 tatcaatgagttcttacaaagagatacaaatgggttacaagaaattagcttcaacaa-gttcacaaagaacaaccctaatttctacccattttcccaatc 15212793  T
Q  93 tcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaacctctcaaaagagcattaatcaaagac 192  Q
    ||||||||||||| |||| |||||||||||||||||| |||||||| ||| ||||||||||||||||| |||| |||            |||||||||||    
T  15212792 tcaccaatgaacaagacattcaatgattttcactcacccaaggtgtttac-aatgtttcccaacccaagagaa-ctc------------taatcaaagac 15212707  T
Q  193 tctcaaccctaaaattaccttatttgatttcctaactttctctctcttaaagc 245  Q
     |||||||||||| |||||| ||||||||||| || |||||||||||| ||||    
T  15212706 cctcaaccctaaagttacctcatttgatttcccaagtttctctctcttcaagc 15212654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 4731764 - 4731592
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctacc-actttctcaat 91  Q
    ||||||||||||||||||||||| ||||||  | |||||| ||| |||| |||||||| |||||||||      |||||||||||||| | |||| ||||    
T  4731764 ctatcaatgagttcttacaaagagatacaaatgggttacaagaaattaggttcaacaa-gctcacaaagagcaaccctaatttctacccattttcccaat 4731666  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaac 166  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||| ||| ||||||||||||||||| |||||    
T  4731665 ctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaacccaagagaac 4731592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 8965753 - 8965914
Alignment:
Q  1 ctatcaatgagttcttacaaaga--tatacaagagttacacgaatttagcttcaacaaagctca-------caaaccctaatttctaccactttctcaat 91  Q
    |||||||||||||||||||||||  |||| ||| |||| | ||| ||| |||||||||| ||||       ||||||||||||||||||  |||| ||||    
T  8965753 ctatcaatgagttcttacaaagagatataaaagggttataagaaattaacttcaacaaa-ctcataaagaacaaaccctaatttctacctttttcccaat 8965851  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttccca 154  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||    
T  8965852 ctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaaatgtttccca 8965914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 43036529 - 43036296
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctacc-actttctcaat 91  Q
    ||||||||||||||||||||||| ||||||  || ||||| ||| |||| |||||||| | |||||||      |||||||||||||| | |||| ||||    
T  43036529 ctatcaatgagttcttacaaagagatacaaatgaattacaagaaattagtttcaacaa-gttcacaaagaacaaccctaatttctacccattttcccaat 43036431  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaacctctcaaaagagcattaatcaaaga 191  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||| ||| ||||||||||||||||| |||| |||            ||||||||||    
T  43036430 ctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaacccaagagaa-ctc------------taatcaaaga 43036345  T
Q  192 ctctcaaccctaaaattaccttatttgatttcctaactttctctctctt 240  Q
    | |||||||||||| ||||||  |||||||||| || ||||||||||||    
T  43036344 ccctcaaccctaaagttacctcctttgatttcccaagtttctctctctt 43036296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 18141926 - 18141753
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaac-----cctaatttctacc-actttctcaatc 92  Q
    ||||||| ||||||||||||||  ||||||  | |||||| ||| ||||||||||||| |||||||||      ||||||||||||| | |||| |||||    
T  18141926 ctatcaaagagttcttacaaagtgatacaaatgggttacaagaaattagcttcaacaa-gctcacaaagaacaacctaatttctacccattttcacaatc 18141828  T
Q  93 tcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaacc 167  Q
    ||||||||||||| ||||||||||||||||||||| | |||||||| |||||||||||||||||| || ||||||    
T  18141827 tcaccaatgaacaagacactcaatgattttcactcgcccaaggtgtttacaaatgtttcccaacctaagagaacc 18141753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 27811384 - 27811151
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctacc-actttctcaat 91  Q
    ||||||||| ||||||||||||| ||||||  | |||||| ||| ||||||||||||| |||||||||      |||||||||||||| | |||| ||||    
T  27811384 ctatcaatgggttcttacaaagagatacaaatgggttacaagaaattagcttcaacaa-gctcacaaagaacaaccctaatttctacccattttcccaat 27811286  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaacctctcaaaagagcattaatcaaaga 191  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||| ||| ||||||| |||||| || |||| |||            ||||||||||    
T  27811285 ctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgttttccaacctaagagaa-ctc------------taatcaaaga 27811200  T
Q  192 ctctcaaccctaaaattaccttatttgatttcctaactttctctctctt 240  Q
    | |||||||||||| ||||||  |||||||||| || ||||||||||||    
T  27811199 ccctcaaccctaaatttacctcctttgatttcccaattttctctctctt 27811151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 33352256 - 33352023
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctacc-actttctcaat 91  Q
    ||||||||||||||||||||||| ||||||  | |||||| ||| |||| |||||||| | |||||||      ||||||||| |||| | |||| ||||    
T  33352256 ctatcaatgagttcttacaaagagatacaaatgggttacaagaaattaggttcaacaa-gttcacaaagaacaaccctaatttttacccattttcccaat 33352158  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaacctctcaaaagagcattaatcaaaga 191  Q
    |||||||||||||| |||||||||||||||||| |||| |||||||| ||| ||||||||||||||||| |||| |||            ||||||||||    
T  33352157 ctcaccaatgaacaagacactcaatgattttcaatcacccaaggtgtttac-aatgtttcccaacccaagagaa-ctc------------taatcaaaga 33352072  T
Q  192 ctctcaaccctaaaattaccttatttgatttcctaactttctctctctt 240  Q
    | |||||||||||| ||||||| |||||||||| || ||||||||||||    
T  33352071 ccctcaaccctaaagttaccttctttgatttcccaagtttctctctctt 33352023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 3303732 - 3303905
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaac------cctaatttctacc-actttctcaat 91  Q
    ||||||||||||||||||||||| ||||||  |||||||| ||| |||| || ||||| |||||||||       | ||||||||||| | |||| ||||    
T  3303732 ctatcaatgagttcttacaaagagatacaaatgagttacaagaaattaggttaaacaa-gctcacaaagaacaaacttaatttctacccattttcccaat 3303830  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaacc 167  Q
    ||||||||| |||| || ||||||||||||||||||||||||||||| ||| ||||||||||||||||| ||||||    
T  3303831 ctcaccaataaacaagatactcaatgattttcactcactcaaggtgtttac-aatgtttcccaacccaagagaacc 3303905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 42498300 - 42498062
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaagag--ttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctaccactttctc--aa 90  Q
    ||||||||||||||||||||||| |||||| ||  ||||| ||| ||||||||||||| | |||||||      ||||||||||||||  ||| ||  ||    
T  42498300 ctatcaatgagttcttacaaagaaatacaaaagggttacaagaaattagcttcaacaa-gttcacaaagaacaaccctaatttctacctttttttcccaa 42498202  T
Q  91 tctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaacctctcaaaagagcattaatcaaag 190  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||| ||| || |||||||||||||| ||||             | ||||||||||    
T  42498201 tctcaccaatgaacaagacactcaatgattttcactcac-caaggtgtttac-aacgtttcccaacccaagagaa-------------ctttaatcaaag 42498117  T
Q  191 actctcaaccctaaaattaccttatttgatttcctaactttctctctcttaaagc 245  Q
    || |||||||||||| ||||||  |||||||||| || |||||||||||| ||||    
T  42498116 accctcaaccctaaagttacctcctttgatttcccaagtttctctctcttcaagc 42498062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 1292525 - 1292697
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaac------cctaatttctacc-actttctcaat 91  Q
    ||||||||||||||||||||||| ||||||  |||||||| ||| ||||||||||||| |||||||||       | ||||||||||| | |||||||||    
T  1292525 ctatcaatgagttcttacaaagagatacaaatgagttacaagaaattagcttcaacaa-gctcacaaagaacaaacttaatttctacccattttctcaat 1292623  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaac 166  Q
    |||||||| ||||| |||||||||| |||||||||||| ||||||||  || | ||||||||||||||| |||||    
T  1292624 ctcaccaaagaacaagacactcaataattttcactcacccaaggtgttcac-agtgtttcccaacccaaaagaac 1292697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 4283630 - 4283468
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctacc-actttctcaat 91  Q
    ||||||||||||||||||||||| ||||||  | |||||| ||| ||||||||||||| |||||||||      |||||||||||||| | |||| ||||    
T  4283630 ctatcaatgagttcttacaaagagatacaaatgggttacaagaaattagcttcaacaa-gctcacaaaaaacaaccctaatttctacccattttcccaat 4283532  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaac 156  Q
    |||||||||||||| ||||||| ||||||||||||| |  ||||||| ||||| |||||||||||    
T  4283531 ctcaccaatgaacaagacactc-atgattttcactctcctaaggtgtttacaattgtttcccaac 4283468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 65 - 166
Target Start/End: Complemental strand, 31218292 - 31218191
Alignment:
Q  65 aaccctaatttctaccactttctc--aatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaata 162  Q
    ||||||||||||||||| ||| ||  ||||||||||||||||| ||||||||||||||||||||||| |||||||| ||| ||||||||||||||||| |    
T  31218292 aaccctaatttctaccattttttcccaatctcaccaatgaacaagacactcaatgattttcactcac-caaggtgtttac-aatgtttcccaacccaaga 31218195  T
Q  163 gaac 166  Q
    ||||    
T  31218194 gaac 31218191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 30143446 - 30143210
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctacc-actttctcaat 91  Q
    ||||||||||||||||||||||| ||||||  | |||||| ||| ||||||||||||| |||||||||      |||||||||||||| | |||| ||||    
T  30143446 ctatcaatgagttcttacaaagagatacaaatgggttacaagaaattagcttcaacaa-gctcacaaagaacaaccctaatttctacccattttcccaat 30143348  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaacctctcaaaagagcattaatcaaaga 191  Q
    ||  |||||||||| |||||  |||||||||||||||| ||| |||| ||| ||||||||||||||||| |||| |||            ||||||||||    
T  30143347 ctggccaatgaacaagacac--aatgattttcactcacccaatgtgtttac-aatgtttcccaacccaagagaa-ctc------------taatcaaaga 30143264  T
Q  192 ctctcaaccctaaaattaccttatttgatttcctaactttctctctcttaaagc 245  Q
    | |||||||||||| ||||||  |||||||||| || |||||||||||| ||||    
T  30143263 ccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttcaagc 30143210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 18655506 - 18655348
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctacc-actttctcaat 91  Q
    ||||||||||||||||||||||| ||||||  | |||||| ||| ||||||||||||| |||||||||      || ||||||||||| | |||||||||    
T  18655506 ctatcaatgagttcttacaaagagatacaaatgggttacaagaaattagcttcaacaa-gctcacaaagaacaaccttaatttctacccattttctcaat 18655408  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcc 152  Q
    ||||||||||||||  |||||| ||||||||||||| | |||||||| ||||| |||||||    
T  18655407 ctcaccaatgaacaaaacactc-atgattttcactctcccaaggtgtttacaattgtttcc 18655348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 44353899 - 44353736
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctacc-actttctcaat 91  Q
    ||||||||||||||||||||||| ||||||  | |||||| ||| ||||||||||||| | |||||||      |||||||||||||| | |||| ||||    
T  44353899 ctatcaatgagttcttacaaagagatacaaatgtgttacaagaaattagcttcaacaa-gttcacaaagaacaaccctaatttctacccattttcccaat 44353801  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaac 156  Q
    ||||| |||||||| || ||||||||||||| |||||| ||| |||| ||||| |||||||||||    
T  44353800 ctcacaaatgaacaagatactcaatgatttttactcacccaatgtgtttacaattgtttcccaac 44353736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 70 - 166
Target Start/End: Complemental strand, 6599002 - 6598906
Alignment:
Q  70 taatttctacc-actttctcaatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaac 166  Q
    ||||||||||| | |||| ||||||||| |||||||| |||||| ||||||||||||||||||||||||| ||| ||||||||||||||||| |||||    
T  6599002 taatttctacccattttcccaatctcacaaatgaacaagacacttaatgattttcactcactcaaggtgtttac-aatgtttcccaacccaagagaac 6598906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 70 - 166
Target Start/End: Complemental strand, 6674455 - 6674359
Alignment:
Q  70 taatttctacc-actttctcaatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaac 166  Q
    ||||||||||| | |||| ||||||||| |||||||| |||||| ||||||||||||||||||||||||| ||| ||||||||||||||||| |||||    
T  6674455 taatttctacccattttcccaatctcacaaatgaacaagacacttaatgattttcactcactcaaggtgtttac-aatgtttcccaacccaagagaac 6674359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 121 - 270
Target Start/End: Complemental strand, 7597593 - 7597444
Alignment:
Q  121 ttcactcactcaaggtgtatacaaatgtttcccaacccaatagaacctctcaaaagagcattaatcaaagactctcaaccctaaaattaccttatttgat 220  Q
    |||||||||||||||| | |||||||||||||||| |||| |||| ||||||| ||| |  | | |||||||||| |||| |||| ||| ||   |||||    
T  7597593 ttcactcactcaaggtatttacaaatgtttcccaatccaagagaaactctcaagagaaccctcaccaaagactcttaaccataaagttatctcccttgat 7597494  T
Q  221 ttcctaactttctctctcttaaagccttcaaaaaacatgaagaatgaagc 270  Q
    |||  || ||| |||||||| ||||||||| |||||||||||||||||||    
T  7597493 ttctcaagtttatctctcttgaagccttcacaaaacatgaagaatgaagc 7597444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 65 - 166
Target Start/End: Complemental strand, 17982688 - 17982587
Alignment:
Q  65 aaccctaatttctaccactttctc--aatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaata 162  Q
    ||||||||||||||||  ||| ||  ||||||||||||||||| ||||||||||||||||||||||| |||||||| ||| ||||||||||||||||| |    
T  17982688 aaccctaatttctacccttttttcccaatctcaccaatgaacaagacactcaatgattttcactcac-caaggtgtttac-aatgtttcccaacccaaga 17982591  T
Q  163 gaac 166  Q
    ||||    
T  17982590 gaac 17982587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 65 - 144
Target Start/End: Original strand, 34254464 - 34254542
Alignment:
Q  65 aaccctaatttctaccactttctcaatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaa 144  Q
    ||||||||||||||||  |||| |||||||||||||||||| ||||||||||||||||||||||| |||||||| |||||    
T  34254464 aaccctaatttctacccttttcccaatctcaccaatgaacaagacactcaatgattttcactcac-caaggtgtttacaa 34254542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 83 - 166
Target Start/End: Complemental strand, 44303869 - 44303788
Alignment:
Q  83 tttctcaatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaac 166  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||| |||||||| ||| ||||||||||||||||| |||||    
T  44303869 tttcccaatctcaccaatgaacaagacactcaatgattttcactcac-caaggtgtttac-aatgtttcccaacccaagagaac 44303788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 42435053 - 42435215
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctaccactttctc-aat 91  Q
    ||||||||||||||||||||||| ||||||  | |||||| ||| ||||||||||||| |||||||||      ||||||||||||||  ||| || |||    
T  42435053 ctatcaatgagttcttacaaagagatacaaatgggttacaagaaattagcttcaacaa-gctcacaaagaacaaccctaatttctacccatttttccaat 42435151  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaac 156  Q
    |||||||||||||| ||||||| ||||||||||||| | ||| |||| ||||| ||||| |||||    
T  42435152 ctcaccaatgaacaagacactc-atgattttcactctcccaaagtgtttacaattgtttaccaac 42435215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 83 - 245
Target Start/End: Original strand, 12702791 - 12702938
Alignment:
Q  83 tttctcaatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaacctctcaaaagagcatt 182  Q
    |||| |||||||||||||||||| |||||| |||||||||||||||| |||||||| ||| ||||||||||||||||| |||| |||            |    
T  12702791 tttcccaatctcaccaatgaacaagacacttaatgattttcactcac-caaggtgtttac-aatgtttcccaacccaagagaa-ctc------------t 12702875  T
Q  183 aatcaaagactctcaaccctaaaattaccttatttgatttcctaactttctctctcttaaagc 245  Q
    |||||||||| |||||||||||| ||||||  |||||||||| || |||||||||||| ||||    
T  12702876 aatcaaagaccctcaaccctaaatttacctcctttgatttcccaagtttctctctcttcaagc 12702938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 1345433 - 1345605
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctac-cactttctcaat 91  Q
    |||||||||||||||| |||||| |||||   | |||||| ||| |||||||||| ||| ||||||||      ||||||||||||| || |||| ||||    
T  1345433 ctatcaatgagttctttcaaagagatacatatgggttacaagaaattagcttcaataaa-ctcacaaagaacaaccctaatttctacacattttcccaat 1345531  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaac 166  Q
    ||||| |||||||| |||| |||||||||||||||||| |||||||| ||| ||| ||||||||| ||| |||||    
T  1345532 ctcacaaatgaacaagacattcaatgattttcactcacccaaggtgtttac-aatatttcccaactcaagagaac 1345605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 65 - 166
Target Start/End: Original strand, 1746351 - 1746452
Alignment:
Q  65 aaccctaatttctaccactttct--caatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaata 162  Q
    ||||||||||||||||  ||| |  |||||||||||||||||| ||||||||||||||||||||||| |||||||| ||| |||||||||||||| || |    
T  1746351 aaccctaatttctacctttttttttcaatctcaccaatgaacaagacactcaatgattttcactcac-caaggtgtttac-aatgtttcccaaccaaaga 1746448  T
Q  163 gaac 166  Q
    ||||    
T  1746449 gaac 1746452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 88 - 160
Target Start/End: Original strand, 4743360 - 4743431
Alignment:
Q  88 caatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaa 160  Q
    |||||||||||||||||| ||||||||||||||||| ||||| |||||||| ||| |||||||||||||||||    
T  4743360 caatctcaccaatgaacaagacactcaatgattttcgctcacccaaggtgtttac-aatgtttcccaacccaa 4743431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 83 - 166
Target Start/End: Original strand, 19945513 - 19945594
Alignment:
Q  83 tttctcaatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaac 166  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||| |||||||| ||| |||||||||| |||||| |||||    
T  19945513 tttcccaatctcaccaatgaacaagacactcaatgattttcactcac-caaggtgtttac-aatgtttcccgacccaagagaac 19945594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 65 - 144
Target Start/End: Original strand, 34256640 - 34256718
Alignment:
Q  65 aaccctaatttctaccactttctcaatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaa 144  Q
    ||||||||||||||||| |||  |||||||||||||||||| ||||||||||||||||||| ||| |||||||| |||||    
T  34256640 aaccctaatttctaccatttttccaatctcaccaatgaacaagacactcaatgattttcacacac-caaggtgtttacaa 34256718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 4162603 - 4162433
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaag-ctcaca----aaccctaatttctaccactttctcaatct 93  Q
    ||||||||||||||||||||||| ||||||  |||||||| ||| |||||||||||||   |||| |    || ||||| |||||||  |||  |  |||    
T  4162603 ctatcaatgagttcttacaaagagatacaaatgagttacaagaaattagcttcaacaagttctcaaagaacaaacctaacttctacccattttcc--tct 4162506  T
Q  94 caccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaacc 167  Q
    ||| |||||||| ||||||||||||||||||||| |||||||||| ||| ||||||| ||||||||| ||||||    
T  4162505 cactaatgaacaagacactcaatgattttcactcgctcaaggtgtttac-aatgttttccaacccaagagaacc 4162433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 40221851 - 40221689
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctacc-actttctcaat 91  Q
    ||||||| ||||||||||||||| ||||||  | |||||| ||| |||| |||||||| |||||||||      |||||||||||||| | |||  ||||    
T  40221851 ctatcaacgagttcttacaaagagatacaaatgggttacaagaaattagtttcaacaa-gctcacaaagaacaaccctaatttctacccattttaccaat 40221753  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaac 156  Q
    |||||||| ||||| |||||||| |||||||||||| | |||||||| ||||| |||||||||||    
T  40221752 ctcaccaaagaacaagacactca-tgattttcactctcccaaggtgtttacaattgtttcccaac 40221689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 5689377 - 5689204
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctaccactttctc-aat 91  Q
    ||||||||||||||||||||||| ||||||  | |||||| ||| |||||||  |||| |||||||||      || |||||||||||  ||| || |||    
T  5689377 ctatcaatgagttcttacaaagagatacaaatgggttacaagaaattagctttgacaa-gctcacaaagcaccaccttaatttctacccatttttccaat 5689279  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaacc 167  Q
    ||||  |||||||| ||||||||||||||||||||||| |||||||| ||| ||||||||| ||| ||| ||||||    
T  5689278 ctcattaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttccaaactcaagagaacc 5689204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 19491761 - 19491924
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaac------cctaatttctacc-actttctcaat 91  Q
    ||||||| ||||||||||||||| ||||||  | |||||| ||| |||| |||||||| |||||||||       ||||||||||||| | |||| ||||    
T  19491761 ctatcaacgagttcttacaaagagatacaaatgggttacaagaaattagtttcaacaa-gctcacaaagaacaaacctaatttctacccattttcccaat 19491859  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaaccc 158  Q
    |||||||||||||| |||||||||| |||||||||||| |||| ||| |||  ||||||||||||||    
T  19491860 ctcaccaatgaacaagacactcaat-attttcactcacccaagatgtttac-gatgtttcccaaccc 19491924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 3772298 - 3772162
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaac------cctaatttctaccacttt-ctcaat 91  Q
    |||||||| | |||||||||||||||||||  |||||||| ||| ||||||| || || |||||||||       ||||||||||| || ||| ||||||    
T  3772298 ctatcaataaattcttacaaagatatacaaatgagttacaagaaattagcttaaataa-gctcacaaagaacaaacctaatttctatcaattttctcaat 3772200  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcac 129  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  3772199 ctcaccaatgaacaagacactcaatcattttcactcac 3772162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 9765851 - 9765691
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctacc-actttctcaat 91  Q
    ||||||||||||||||||||||| ||||||  | |||||| ||| |||||||   ||| |||||||||      |||||||||||||| | |||| ||||    
T  9765851 ctatcaatgagttcttacaaagagatacaaatgggttacaagaaattagctttgccaa-gctcacaaagaacaaccctaatttctacccattttcccaat 9765753  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaaccc 158  Q
    |||||||||||||| |||||||||    |||||||||| |||||||| ||| |||||||||||||||    
T  9765752 ctcaccaatgaacaagacactcaa----tttcactcacccaaggtgtttac-aatgtttcccaaccc 9765691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 68 - 166
Target Start/End: Original strand, 41364983 - 41365081
Alignment:
Q  68 cctaatttctaccacttt-ctcaatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaac 166  Q
    |||||||||||||| ||| | ||||||||    |||||| ||||||||||||||||||||||| |||||||| ||| ||||||||||||||||| |||||    
T  41364983 cctaatttctaccaattttcccaatctcagtcttgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaacccaaaagaac 41365081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 62 - 270
Target Start/End: Original strand, 3231927 - 3232137
Alignment:
Q  62 acaaaccctaatttctaccactttctcaatctca-ccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaa 160  Q
    ||||| ||||||||||||   ||||||||||||  || | ||||| || ||||||||| || ||| ||| |||||||| ||| ||||||||||||| |||    
T  3231927 acaaagcctaatttctacatttttctcaatctcttcctaagaacaagagactcaatgaatt-cacccacccaaggtgtttactaatgtttcccaactcaa 3232025  T
Q  161 tagaacctctcaaaagagcattaatcaaag--actctcaaccctaaaattaccttatttgatttcctaactttctctctcttaaagc-cttcaaaaaaca 257  Q
     |||||||||||||||| | || | |||||  ||| | ||| ||||| ||||| | |||||||||| || ||||| |||||||| || || |  ||||||    
T  3232026 gagaacctctcaaaagaac-ttcaccaaagacactattaactctaaacttaccatctttgatttcccaagtttctttctcttaatgctctactcaaaaca 3232124  T
Q  258 tgaagaatgaagc 270  Q
    |||||||||||||    
T  3232125 tgaagaatgaagc 3232137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 2 - 156
Target Start/End: Complemental strand, 11384090 - 11383930
Alignment:
Q  2 tatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcaca------aaccctaatttcta-ccactttctcaatc 92  Q
    |||||||| ||||||||||||| ||||||  |||||||| ||| |||||||||||||| ||||||      |||||||||||||| ||| |||  |||||    
T  11384090 tatcaatgggttcttacaaagagatacaaatgagttacaagaaattagcttcaacaaa-ctcacaaagaacaaccctaatttctacccatttttccaatc 11383992  T
Q  93 tcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaac 156  Q
    |||  |||||||| ||||||| ||||||||||||| | |||||||| ||||| | |||||||||    
T  11383991 tca-taatgaacaagacactc-atgattttcactctcccaaggtgtttacaattatttcccaac 11383930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 88 - 165
Target Start/End: Original strand, 18106235 - 18106311
Alignment:
Q  88 caatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaa 165  Q
    |||||||||| ||||||| |||||||||  |||||||||||| |||||||| ||| ||||||||||||||||| ||||    
T  18106235 caatctcaccgatgaacaagacactcaacaattttcactcacccaaggtgtttac-aatgtttcccaacccaagagaa 18106311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 110 - 269
Target Start/End: Original strand, 32902353 - 32902512
Alignment:
Q  110 actcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaacctctcaaaagagcattaatcaaagactctcaaccctaaaatta 209  Q
    |||||||||||| |||||||| || |||  | |||||||||||||| |||| | |||||||||| ||| |  | | || |||  |||||||||||| |||    
T  32902353 actcaatgattt-cactcacttaatgtgctttcaaatgtttcccaatccaagataacctctcaagagaaccctcaccatagatcctcaaccctaaagtta 32902451  T
Q  210 ccttatttgatttcctaactttctctctcttaaag-ccttcaaaaaacatgaagaatgaag 269  Q
    ||| || |||||||| || |||||||||||| ||| ||| |  ||||||||||||||||||    
T  32902452 cctcatctgatttcccaagtttctctctcttgaagccctcctcaaaacatgaagaatgaag 32902512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 40328886 - 40328723
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa---gagttacacgaatttagcttcaacaaagctcacaaac------cctaatttctacc-actttctcaa 90  Q
    ||||||||||||||||||||||| ||||||   |||||||| ||| |||| || ||||| |||||||||       ||||||||||||| | |||| |||    
T  40328886 ctatcaatgagttcttacaaagagatacaaaatgagttacaagaaattagtttaaacaa-gctcacaaagaacaaacctaatttctacccattttcccaa 40328788  T
Q  91 tctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaac 156  Q
    |||||| |||||||| |||| ||| |||||||||||| | |||| ||| ||||| |||||||||||    
T  40328787 tctcacaaatgaacaagacattca-tgattttcactctcccaagatgtttacaattgtttcccaac 40328723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 10930261 - 10930423
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttcta-ccactttctcaat 91  Q
    ||||||||| ||||||||||||| ||| ||  | |||||| ||| ||||||||||| | |||||||||      |||||||||||| ||| |||| ||||    
T  10930261 ctatcaatgtgttcttacaaagagatataaatgggttacaagaaattagcttcaacga-gctcacaaagagcaaccctaatttctatccattttcccaat 10930359  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaac 156  Q
    |||||| ||||||| |||||||| |||||||||||| | |||  ||| ||||| |||||||||||    
T  10930360 ctcaccgatgaacaagacactca-tgattttcactctcccaaaatgtttacaattgtttcccaac 10930423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 70 - 155
Target Start/End: Original strand, 41366752 - 41366837
Alignment:
Q  70 taatttctacc-actttctcaatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaa 155  Q
    ||||||||||| | |||||||||||||    |||||| ||||||||||||||||||||||| |||||||| ||| ||||||||||||    
T  41366752 taatttctacccattttctcaatctcagtcttgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaa 41366837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 62 - 172
Target Start/End: Complemental strand, 41267006 - 41266896
Alignment:
Q  62 acaaaccctaatttctaccactttctcaatctca-ccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaa 160  Q
    ||||| |||||||||||||| |||||||| |||  || | ||||| || |||||||||||| ||||||| ||| || | ||||| ||| |||||||||||    
T  41267006 acaaaacctaatttctaccattttctcaaactcttcctaagaacaagagactcaatgattt-cactcacccaaagtatttacaactgtctcccaacccaa 41266908  T
Q  161 tagaacctctca 172  Q
     |||||||||||    
T  41266907 gagaacctctca 41266896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 108 - 173
Target Start/End: Original strand, 1872086 - 1872151
Alignment:
Q  108 acactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaacctctcaa 173  Q
    |||||||||||||||||||||  ||| || | ||||||||||| |||| |||| ||||||||||||    
T  1872086 acactcaatgattttcactcagccaatgtatttacaaatgttttccaatccaagagaacctctcaa 1872151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 182 - 239
Target Start/End: Complemental strand, 4733740 - 4733683
Alignment:
Q  182 taatcaaagactctcaaccctaaaattaccttatttgatttcctaactttctctctct 239  Q
    ||||||||||| |||||||||||| ||||||  |||||||||| || |||||||||||    
T  4733740 taatcaaagaccctcaaccctaaagttacctcttttgatttcccaagtttctctctct 4733683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 166
Target Start/End: Complemental strand, 10929808 - 10929734
Alignment:
Q  90 atctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaac 166  Q
    |||||||||| ||||| |||||||||||||||||||| |  |||||||| ||| |||| |||||||||||| |||||    
T  10929808 atctcaccaaagaacaagacactcaatgattttcactaatccaaggtgtttac-aatg-ttcccaacccaagagaac 10929734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 270
Target Start/End: Original strand, 29796572 - 29796648
Alignment:
Q  194 ctcaaccctaaaattaccttatttgatttcctaactttctctctcttaaagccttcaaaaaacatgaagaatgaagc 270  Q
    |||||||||||| ||||||  |||||||||  || |||||||||||| ||| || |  |||||||||||||||||||    
T  29796572 ctcaaccctaaagttacctcctttgatttctcaagtttctctctcttgaagtctcctcaaaacatgaagaatgaagc 29796648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 186 - 245
Target Start/End: Original strand, 11712244 - 11712303
Alignment:
Q  186 caaagactctcaaccctaaaattaccttatttgatttcctaactttctctctcttaaagc 245  Q
    ||||||| |||||||||||| |||||| |||||||  ||||| |||||||||||| ||||    
T  11712244 caaagacactcaaccctaaagttacctcatttgataccctaagtttctctctcttgaagc 11712303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 270
Target Start/End: Complemental strand, 5689202 - 5689113
Alignment:
Q  182 taatcaaagactctcaaccctaaaattaccttatttgatttcctaactttctctctcttaaagc-cttcaaaaaacatgaagaatgaagc 270  Q
    ||||||||||| |||||||||||| ||| ||  ||||||||||  | |||||||||||| |||| |||   |||| ||||||||||||||    
T  5689202 taatcaaagaccctcaaccctaaagttatctcctttgatttccctagtttctctctcttgaagctcttaccaaaaaatgaagaatgaagc 5689113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 129
Target Start/End: Original strand, 7444955 - 7445016
Alignment:
Q  69 ctaatttctaccactttctcaatctc-accaatgaacatgacactcaatgattttcactcac 129  Q
    ||||||||||||| ||||||||||||  || ||||||| || |||||| |||||||||||||    
T  7444955 ctaatttctaccaatttctcaatctcttcccatgaacaagagactcaaagattttcactcac 7445016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 99
Target Start/End: Complemental strand, 15290559 - 15290522
Alignment:
Q  62 acaaaccctaatttctaccactttctcaatctcaccaa 99  Q
    ||||||||||||||||||| ||||| ||||||||||||    
T  15290559 acaaaccctaatttctacccctttcccaatctcaccaa 15290522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 99
Target Start/End: Complemental strand, 15470928 - 15470891
Alignment:
Q  62 acaaaccctaatttctaccactttctcaatctcaccaa 99  Q
    ||||||||||||||||||| ||||| ||||||||||||    
T  15470928 acaaaccctaatttctacccctttcccaatctcaccaa 15470891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 223
Target Start/End: Original strand, 41365084 - 41365125
Alignment:
Q  182 taatcaaagactctcaaccctaaaattaccttatttgatttc 223  Q
    ||||||||||| |||||||||||| |||||| ||||||||||    
T  41365084 taatcaaagaccctcaaccctaaagttacctcatttgatttc 41365125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 1292700 - 1292740
Alignment:
Q  182 taatcaaagactctcaaccctaaaattaccttatttgattt 222  Q
    ||||||||||| |||||||||||| |||||| |||||||||    
T  1292700 taatcaaagaccctcaaccctaaagttacctcatttgattt 1292740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 18106141 - 18106197
Alignment:
Q  1 ctatcaatgagttcttac-aaagatatacaagagttacacgaatttagcttcaacaa 56  Q
    |||||||||||||||||| ||||||| | | |||||||| ||| |||||||||||||    
T  18106141 ctatcaatgagttcttacaaaagatacaaatgagttacaagaaattagcttcaacaa 18106197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 245
Target Start/End: Original strand, 19948545 - 19948621
Alignment:
Q  169 ctcaaaagagcattaatcaaagactctcaaccctaaaattaccttatttgatttcctaactttctctctcttaaagc 245  Q
    ||||||||| |  |||||||||||||| ||||||||| || | |  |||||||||| || |||||||||||| ||||    
T  19948545 ctcaaaagaactctaatcaaagactctaaaccctaaagttgcttcctttgatttcccaagtttctctctcttcaagc 19948621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 104; Significance: 8e-52; HSPs: 72)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 1 - 270
Target Start/End: Original strand, 36146470 - 36146748
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa-------ccctaatttctacc-actttctcaa 90  Q
    ||||||||||||||||||||||| ||||||  | |||||| ||| ||||||||||||| |||||||||       | |||||||||||| | |||| |||    
T  36146470 ctatcaatgagttcttacaaagagatacaaatgggttaca-gaaattagcttcaacaa-gctcacaaataacaaactctaatttctacccattttcccaa 36146567  T
Q  91 tctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaacctctcaaaagagcattaatcaaag 190  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||||| |||||||||||| | | |  |||||||||    
T  36146568 tctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaaatgtttcccaacccaagagaacctctcaagaaaaccataatcaaag 36146667  T
Q  191 actctcaaccctaaaattaccttatttgatttcctaactttctctctcttaaagc-cttcaaaaaacatgaagaatgaagc 270  Q
    || |||||| ||||| ||||||  |||||||||| || ||| |||||||| |||| ||||  |||| ||||||||||||||    
T  36146668 accctcaacactaaagttacctcctttgatttcccaagtttttctctcttgaagctcttcccaaaaaatgaagaatgaagc 36146748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 65 - 270
Target Start/End: Original strand, 12097992 - 12098198
Alignment:
Q  65 aaccctaatttctacc-actttctcaatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatag 163  Q
    |||||||||||||||| | |||| |||||| ||||||||||| ||||||||||||||||||||||| |||| ||| ||| ||||||||||||||||| ||    
T  12097992 aaccctaatttctacccattttcccaatctaaccaatgaacaagacactcaatgattttcactcacccaagatgtttac-aatgtttcccaacccaagag 12098090  T
Q  164 aacctctcaaaagagcattaatcaaagactctcaaccctaaaattaccttatttgatttcctaactttctctctcttaaagc-cttcaaaaaacatgaag 262  Q
    |||||||||| | | |  ||||||||||| |||||||||||| ||||||  |||||||||| || ||| |||||||| |||| ||||  |||| ||||||    
T  12098091 aacctctcaagaaaaccctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttttctctcttgaagctcttcccaaaaaatgaag 12098190  T
Q  263 aatgaagc 270  Q
    ||||||||    
T  12098191 aatgaagc 12098198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 65 - 270
Target Start/End: Original strand, 41317567 - 41317773
Alignment:
Q  65 aaccctaatttctaccacttt-ctcaatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatag 163  Q
    ||||||||||||||||| ||| | |||||||||||||||||| || |||||||||||||||||||  |||||||| ||||| ||||||||||||||| ||    
T  41317567 aaccctaatttctaccaattttcccaatctcaccaatgaacaagagactcaatgattttcactcatccaaggtgtttacaa-tgtttcccaacccaagag 41317665  T
Q  164 aacctctcaaaagagcattaatcaaagactctcaaccctaaaattaccttatttgatttcctaactttctctctcttaaagc-cttcaaaaaacatgaag 262  Q
    |||| ||||| ||| |  ||||||||||| |||||||||||| ||||||  ||||||||||  | |||||||||||| |||| |||   |||| ||||||    
T  41317666 aacccctcaagagaaccctaatcaaagaccctcaaccctaaagttacctcctttgatttccctagtttctctctcttgaagctcttaccaaaaaatgaag 41317765  T
Q  263 aatgaagc 270  Q
    ||||||||    
T  41317766 aatgaagc 41317773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 47674005 - 47674177
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctacc-actttctcaat 91  Q
    ||||||||||||||||||||||| ||||||  | |||||| ||| ||||||||||||| | |||||||      |||||||||||||| | |||||||||    
T  47674005 ctatcaatgagttcttacaaagagatacaaatgggttacaagaaattagcttcaacaa-gttcacaaagaacaaccctaatttctacccattttctcaat 47674103  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaac 166  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||| ||| ||||||| ||||||||| |||||    
T  47674104 ctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgttttccaacccaagagaac 47674177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 8153448 - 8153197
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctac-cactttctcaat 91  Q
    ||||||||||||| ||||||||| ||||||  |||||||| ||| |||||||  ||||  ||||||||      ||||||||||||| || |||| ||||    
T  8153448 ctatcaatgagttattacaaagagatacaaatgagttacaagaaattagctttgacaat-ctcacaaagaacaaccctaatttctactcattttcccaat 8153350  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaacctctcaaaagagcattaatcaaaga 191  Q
    |||||||||||||| ||||||||||||||||||||||| ||| |||| ||| ||||||||||||||||| |||||| ||||| ||  |  ||||||||||    
T  8153349 ctcaccaatgaacaagacactcaatgattttcactcacccaatgtgtttac-aatgtttcccaacccaagagaacccctcaagaggaccctaatcaaaga 8153251  T
Q  192 ctctcaaccctaaaattaccttatttgatttcctaactttctctctcttaaagc 245  Q
    | | ||||| |||| ||||||  |||||||| |  | |||||||||||| ||||    
T  8153250 cccccaaccttaaagttacctcctttgattttcctagtttctctctcttgaagc 8153197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 2 - 166
Target Start/End: Original strand, 31733032 - 31733203
Alignment:
Q  2 tatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctacc-actttctcaatc 92  Q
    |||||||||||||||||||||| ||||||  | |||||| ||| ||||||||| ||| |||||||||      |||||||||||||| | ||||||| ||    
T  31733032 tatcaatgagttcttacaaagagatacaaatgggttacaagaaattagcttcaccaa-gctcacaaagaacaaccctaatttctacccattttctcagtc 31733130  T
Q  93 tcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaac 166  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||| ||| ||||||||||||||||| |||||    
T  31733131 tcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaacccaagagaac 31733203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 1113763 - 1113591
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttcta-ccactttctcaat 91  Q
    ||||||||||||||||||||||| ||||||  | |||| | ||| ||||||||||||| |||||||||      |||||||||||| ||| |||||||||    
T  1113763 ctatcaatgagttcttacaaagagatacaaatgggttataagaaattagcttcaacaa-gctcacaaagaacaaccctaatttctatccattttctcaat 1113665  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaac 166  Q
    ||||| |||||||| ||||||||||||||||||||||| |||| ||| ||| ||||||||||||||||| |||||    
T  1113664 ctcacaaatgaacaagacactcaatgattttcactcacccaagttgtttac-aatgtttcccaacccaagagaac 1113591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 47676198 - 47676370
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctacc-actttctcaat 91  Q
    |||||| |||||||||||||||| ||||||  | |||||| ||| ||||||||||||||  |||||||      |||||||||||||| | |||||||||    
T  47676198 ctatcattgagttcttacaaagagatacaaatgggttacaagaaattagcttcaacaaat-tcacaaagaacaaccctaatttctacccattttctcaat 47676296  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaac 166  Q
    |||||||||||||| |||||||| |||||||||||||| |||||||| ||| ||||||||||||||||| |||||    
T  47676297 ctcaccaatgaacaagacactcattgattttcactcacccaaggtgtttac-aatgtttcccaacccaagagaac 47676370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 43864350 - 43864112
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctacc-actttctcaat 91  Q
    |||||||| |||| ||||||||| ||||||  | |||||| ||| ||||||||||||| | |||||||      |||||||||||||| |||||  ||||    
T  43864350 ctatcaattagtttttacaaagagatacaaatgggttacaggaaattagcttcaacaa-gttcacaaagaacaaccctaatttctacccacttttccaat 43864252  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaacctctcaaaagagcattaatcaaaga 191  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||| ||| ||||||||||||||||| ||||             | |||||||||||    
T  43864251 ctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaacccaagagaa-------------ctttaatcaaaga 43864166  T
Q  192 ctctcaaccctaaaattaccttatttgatttcctaactttctctctcttaaagc 245  Q
    | |||||||||||| ||||||  |||||||||| || |||||||||||| ||||    
T  43864165 ccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttcaagc 43864112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 2361034 - 2361196
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctacc-actttctcaat 91  Q
    ||||||||||||||||||||||| ||||||  |||||||| ||| ||||||||||||| |||||||||      |||||||||||||| | |||| ||||    
T  2361034 ctatcaatgagttcttacaaagagatacaaatgagttacaagaaattagcttcaacaa-gctcacaaagaacaaccctaatttctacccattttcccaat 2361132  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaac 156  Q
    |||||||||||||| |||||||| |||||||||||| | |||||||| ||||| |||||||||||    
T  2361133 ctcaccaatgaacaagacactca-tgattttcactctcccaaggtgtttacaattgtttcccaac 2361196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 30024794 - 30024945
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaa------accctaatttctacc-actttctcaat 91  Q
    ||||||| ||||||||||||||| ||||||  | |||||| ||| ||||||||||||| ||||||||      ||||||||||||||| | |||||||||    
T  30024794 ctatcaaagagttcttacaaagagatacaaatgggttacaagaaattagcttcaacaa-gctcacaatgaacaaccctaatttctacccattttctcaat 30024892  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaa 144  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||| |||||    
T  30024893 ctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaa 30024945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 65 - 266
Target Start/End: Original strand, 30843366 - 30843568
Alignment:
Q  65 aaccctaatttctaccactttctcaatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaataga 164  Q
    ||||||||||| ||||  || ||||||||| |||||||||| || ||||||||||||| |||||   ||||||| |||||||||||| |||||||| |||    
T  30843366 aaccctaatttataccttttactcaatctctccaatgaacaagatactcaatgattttaactcatctaaggtgtttacaaatgtttctcaacccaagaga 30843465  T
Q  165 acctctcaaaagagcattaatcaaagactctcaaccctaaaattaccttatttgatttcctaactttctctctcttaaagcctt-caaaaaacatgaaga 263  Q
    |||| |||| ||| |  | |||||||||||| || |||||| ||||||  ||||||||| ||| |||||||||| | || |||| |  ||||||||||||    
T  30843466 acctttcaagagaacccttatcaaagactctaaatcctaaagttacctcctttgatttcttaagtttctctctcctgaacccttcctcaaaacatgaaga 30843565  T
Q  264 atg 266  Q
    |||    
T  30843566 atg 30843568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 62 - 258
Target Start/End: Original strand, 4253660 - 4253844
Alignment:
Q  62 acaaaccctaatttctaccactttctcaatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaat 161  Q
    |||||||||||||||||||| |||  |||| ||||||||||||| || ||||||||||||||||||||  ||||||| ||||||||||| |||||||||     
T  4253660 acaaaccctaatttctaccattttaccaatttcaccaatgaacaagaaactcaatgattttcactcacctaaggtgtttacaaatgttttccaacccaag 4253759  T
Q  162 agaacctctcaaaagagcattaatcaaagactctcaaccctaaaattaccttatttgatttcctaactttctctctcttaaagcct-tcaaaaaacat 258  Q
    |||||| |||            | |||| || |||||||||||| ||||||  |||||||||| || ||||||||||||||||||| |||||||||||    
T  4253760 agaacc-ctc------------accaaataccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttaaagcctctcaaaaaacat 4253844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 48491685 - 48491513
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctacc-actttctcaat 91  Q
    |||||||||||||||| |||||| ||||||  | |||||| ||| ||||||||||||| | |||||||      |||||||||||||| | |||| ||||    
T  48491685 ctatcaatgagttctttcaaagagatacaaatgggttacaagaaattagcttcaacaa-gttcacaaagaacaaccctaatttctacccattttcccaat 48491587  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaac 166  Q
    |||||||||||||| ||||||||||||||||||||||| ||| |||| ||| ||||||||||||||||| |||||    
T  48491586 ctcaccaatgaacaagacactcaatgattttcactcacccaaagtgtttac-aatgtttcccaacccaagagaac 48491513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 4586267 - 4586095
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctacc-actttctcaat 91  Q
    ||||||||||||||||||||||| ||| ||  | ||||||  || ||||||||||||| | |||||||      |||||||||||||| | |||| ||||    
T  4586267 ctatcaatgagttcttacaaagagataaaaatgggttacaaaaaattagcttcaacaa-gttcacaaagaacaaccctaatttctacccattttcccaat 4586169  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaac 166  Q
    |||||||||||||| ||||||||||||||| ||||||| |||||||| ||| ||||||||||||||||| |||||    
T  4586168 ctcaccaatgaacaagacactcaatgatttacactcacccaaggtgtttac-aatgtttcccaacccaagagaac 4586095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 26417422 - 26417250
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctacc-actttctcaat 91  Q
    ||||||| ||||||||||||||| ||||||  | |||||| ||| ||| ||||||||| |||||||||      |||||||||||||| | |||| ||||    
T  26417422 ctatcaacgagttcttacaaagagatacaaatgggttacaagaaattatcttcaacaa-gctcacaaagaacaaccctaatttctacccattttcccaat 26417324  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaac 166  Q
    |||||||||||||| ||||||||||||||||||| | |||||||||| ||| |||||||||||| |||| |||||    
T  26417323 ctcaccaatgaacaagacactcaatgattttcacccgctcaaggtgtttac-aatgtttcccaatccaagagaac 26417250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 27347923 - 27347751
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaac------cctaatttctacc-actttctcaat 91  Q
    ||||||||||||||||||||||| ||||||  | |||||| ||| ||||||||||||| | |||||||       ||||||||||||| | |||| ||||    
T  27347923 ctatcaatgagttcttacaaagagatacaaatgggttacaagaaattagcttcaacaa-gttcacaaagaacaatcctaatttctacccattttcccaat 27347825  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaac 166  Q
    |||||||||||||| ||||||||||||||||||||||| ||| |||| ||| |||||||||||||| || |||||    
T  27347824 ctcaccaatgaacaagacactcaatgattttcactcacccaatgtgtttac-aatgtttcccaacctaagagaac 27347751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 23555146 - 23554974
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaagagt--tacacgaatttagcttcaacaaagctcacaaa------ccctaatttctaccactttctc--aa 90  Q
    |||||||||||||||||||||||  ||||| |||  |||| ||| ||||||||||||| | |||||||      ||||||||||||||| ||| ||  ||    
T  23555146 ctatcaatgagttcttacaaagaggtacaaaagtgttacaagaaattagcttcaacaa-gttcacaaagaacaaccctaatttctaccattttttcccaa 23555048  T
Q  91 tctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaac 166  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||| ||| ||||||||||||| ||| |||||    
T  23555047 tctcaccaatgaacaagacactcaatgattttcactcac-caaggtgtttac-aatgtttcccaactcaagagaac 23554974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 65 - 166
Target Start/End: Complemental strand, 29991088 - 29990989
Alignment:
Q  65 aaccctaatttctaccactttctcaatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaataga 164  Q
    |||||||||||||| |  |||| |||||||||||||||||| ||||||||||||||||||||||| |||||||| ||| ||||||||||||||||| |||    
T  29991088 aaccctaatttctatccttttcccaatctcaccaatgaacaagacactcaatgattttcactcac-caaggtgtttac-aatgtttcccaacccaagaga 29990991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 14069895 - 14070067
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctaccacttt-ctcaat 91  Q
    ||||||||||||||||||||||| ||||||  | |||||| ||| |||||||  |||| | |||||||      ||||||||||||||  ||| | ||||    
T  14069895 ctatcaatgagttcttacaaagagatacaaatgggttacaagaaattagctttgacaa-gttcacaaagaacaaccctaatttctaccctttttcccaat 14069993  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaac 166  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||| ||| |||||| |||||||||| |||||    
T  14069994 ctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgttacccaacccaagagaac 14070067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 14379923 - 14380095
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctaccacttt-ctcaat 91  Q
    ||||||||||||||||||||||| ||||||  | |||||| ||| |||||||  |||| | |||||||      ||||||||||||||  ||| | ||||    
T  14379923 ctatcaatgagttcttacaaagagatacaaatgggttacaagaaattagctttgacaa-gttcacaaagaacaaccctaatttctaccctttttcccaat 14380021  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaac 166  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||| ||| |||||| |||||||||| |||||    
T  14380022 ctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgttacccaacccaagagaac 14380095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 35854020 - 35853849
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaagag--ttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctaccacttt-ctcaat 91  Q
    ||||||||||||||||||||||| |||||| ||  ||||| ||| |||||||  |||| | |||||||      ||||||||||||||  ||| | ||||    
T  35854020 ctatcaatgagttcttacaaagagatacaaaagggttacaagaaattagctttgacaa-gttcacaaagaacaaccctaatttctaccctttttcccaat 35853922  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaac 166  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||| ||| ||||||||||||||||| |||||    
T  35853921 ctcaccaatgaacaagacactcaatgattttcactcac-caaggtgtttac-aatgtttcccaacccaagagaac 35853849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 38671284 - 38671456
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctacc-actttctcaat 91  Q
    ||||||||||||||||||||||  ||||||  | ||||||  || ||||||| ||||| |||||||||      |||||||||||||| | |||| ||||    
T  38671284 ctatcaatgagttcttacaaagtgatacaaatgtgttacaataaattagcttaaacaa-gctcacaaagaacaaccctaatttctacccattttcccaat 38671382  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaac 166  Q
    ||||| |||||||| ||||||||||||||||| ||||| |||||||| ||| ||||||||||||||||| |||||    
T  38671383 ctcacaaatgaacaagacactcaatgattttcgctcacccaaggtgtttac-aatgtttcccaacccaagagaac 38671456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 65 - 166
Target Start/End: Complemental strand, 4178809 - 4178709
Alignment:
Q  65 aaccctaatttctaccacttt-ctcaatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatag 163  Q
    ||||||||||||||||  ||| | |||||||||||||||||| ||||||||||||||||||||||| |||||||| ||| ||||||||||||||||| ||    
T  4178809 aaccctaatttctaccttttttcccaatctcaccaatgaacaagacactcaatgattttcactcac-caaggtgtttac-aatgtttcccaacccaagag 4178712  T
Q  164 aac 166  Q
    |||    
T  4178711 aac 4178709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 70 - 244
Target Start/End: Original strand, 5514148 - 5514321
Alignment:
Q  70 taatttctaccactttctcaatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaacctc 169  Q
    ||||||||||   ||| |||||||| | |||||||| || |||||||||||||||||||   ||||||| ||||| ||||||||||||||| ||||  ||    
T  5514148 taatttctactcttttttcaatctctcaaatgaacaagaaactcaatgattttcactcatcgaaggtgtttacaagtgtttcccaacccaagagaatttc 5514247  T
Q  170 tcaaaagagcattaatcaaagactctcaaccctaaaattaccttatttgatttcctaactttctctctcttaaag 244  Q
    | || |||   || | |||| |||||| ||||| ||| ||||| |||||||||||||| ||||||||||||||||    
T  5514248 ttaagagaatcttcaccaaaaactctc-acccttaaagtacctcatttgatttcctaagtttctctctcttaaag 5514321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 62 - 167
Target Start/End: Original strand, 24526027 - 24526132
Alignment:
Q  62 acaaaccctaatttctacc-actttctcaatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaa 160  Q
    ||||| ||||||||||||| | |||| |||| ||||||||||||| ||||||||||||||||||||||| |||||||| ||| |||||||||||||| ||    
T  24526027 acaaaacctaatttctacccattttcccaatttcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaacctaa 24526125  T
Q  161 tagaacc 167  Q
     ||||||    
T  24526126 gagaacc 24526132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 29608843 - 29608680
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctacc-actttctcaat 91  Q
    ||||||||||||||||||||||| ||||||  |||||||| ||| ||||||||||||| |||||||||      |||||||||||||| | |||| ||||    
T  29608843 ctatcaatgagttcttacaaagagatacaaatgagttacaagaaattagcttcaacaa-gctcacaaagaacaaccctaatttctacccattttcccaat 29608745  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaac 156  Q
    |||||||| ||||| ||||||||   | |||| ||| |||||||||| ||||| |||||||||||    
T  29608744 ctcaccaaagaacaagacactcatgaagtttcgctctctcaaggtgtttacaattgtttcccaac 29608680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 167
Target Start/End: Complemental strand, 31518898 - 31518728
Alignment:
Q  4 tcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaac------cctaatttctacc-actttctcaatctc 94  Q
    |||||||||||||||||||| ||||||  |||||||| |||  ||||||||| || |||||||||       ||||||||||||| | |||| |||||||    
T  31518898 tcaatgagttcttacaaagagatacaaatgagttacaagaaactagcttcaataa-gctcacaaagaacaaacctaatttctacctattttcccaatctc 31518800  T
Q  95 accaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaacc 167  Q
    ||||||||||| ||||||| ||||||||||||||| |||||||| |||  |||||| ||||||||| ||||||    
T  31518799 accaatgaacaagacactcgatgattttcactcacccaaggtgtttac-gatgttttccaacccaaaagaacc 31518728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 65 - 166
Target Start/End: Complemental strand, 48489466 - 48489365
Alignment:
Q  65 aaccctaatttctacc-actttctcaatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatag 163  Q
    |||||||||||||||| | |||| |||||||||||||||||| |||| | |||||||||||||||| |||||||| ||| ||||||||||||||||| ||    
T  48489466 aaccctaatttctacccattttcccaatctcaccaatgaacaagacatttaatgattttcactcacccaaggtgtttac-aatgtttcccaacccaagag 48489368  T
Q  164 aac 166  Q
    |||    
T  48489367 aac 48489365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 65 - 165
Target Start/End: Original strand, 4538673 - 4538773
Alignment:
Q  65 aaccctaatttctaccactttctc-aatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatag 163  Q
    ||||||||||||||||  ||| || ||||||||||||||||| ||||||||||||||||||||||| |||||||| ||| ||| ||||||||||||| ||    
T  4538673 aaccctaatttctacccatttttccaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatttttcccaacccaagag 4538771  T
Q  164 aa 165  Q
    ||    
T  4538772 aa 4538773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 18126750 - 18126585
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctac-cactttctcaat 91  Q
    ||||||||||||||||||||||| ||||||  | |||||| ||| ||||||| ||||| | |||||||      ||||||||||||| || |||  ||||    
T  18126750 ctatcaatgagttcttacaaagagatacaaatgggttacaagaaattagcttgaacaa-gttcacaaagaacaaccctaatttctacacatttttccaat 18126652  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaaccca 159  Q
    ||||||||||||||  |||||||||||||||||||||| |||| ||| ||| ||||||||||||||||    
T  18126651 ctcaccaatgaacaaaacactcaatgattttcactcacccaagttgtttac-aatgtttcccaaccca 18126585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 2 - 167
Target Start/End: Complemental strand, 23344080 - 23343907
Alignment:
Q  2 tatcaatgagttcttacaaagatatac--aagagttacacgaatttagcttcaacaaagctcacaaa-------ccctaatttctaccactttctcaatc 92  Q
    |||||||||||||| ||||||||||||  ||| |||||| ||| ||||||||||||| |||||||||       || |||||||||||  ||||  ||||    
T  23344080 tatcaatgagttctcacaaagatatactaaagggttacaagaaattagcttcaacaa-gctcacaaagaataaaccttaatttctacccttttccaaatc 23343982  T
Q  93 tcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaacc 167  Q
    ||||||||||||  |||| |||||||||||||||||| |||||||| |  |||||||||| |||| || ||||||    
T  23343981 tcaccaatgaactagacattcaatgattttcactcacccaaggtgttttgaaatgtttccaaacctaagagaacc 23343907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 4 - 156
Target Start/End: Original strand, 4508771 - 4508930
Alignment:
Q  4 tcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctac-cactttctcaatctc 94  Q
    |||||||||||||||||||| ||||||  | |||||| ||| |||||||||| || |||||||||      ||||||||||||| || |||| |||||||    
T  4508771 tcaatgagttcttacaaagagatacaaatgggttacaagaaattagcttcaataa-gctcacaaagaacaaccctaatttctactcattttcccaatctc 4508869  T
Q  95 accaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaac 156  Q
    |||||| |||| |||||||| |||||||||||| | |||||||| ||||| |||||||||||    
T  4508870 accaatcaacaagacactca-tgattttcactctcccaaggtgtttacaattgtttcccaac 4508930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 83 - 166
Target Start/End: Original strand, 24514913 - 24514994
Alignment:
Q  83 tttctcaatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaac 166  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||| |||||||| ||| ||||||||||||||||| |||||    
T  24514913 tttcccaatctcaccaatgaacaagacactcaatgattttcactcac-caaggtgtttac-aatgtttcccaacccaagagaac 24514994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 68 - 166
Target Start/End: Original strand, 41649146 - 41649244
Alignment:
Q  68 cctaatttctaccactttctc-aatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaac 166  Q
    |||||||||||||| ||| || |||||||| |||||||| |||||||||||||||||||| || |||||||| ||| ||||||||||||||||| |||||    
T  41649146 cctaatttctaccaatttttccaatctcacaaatgaacaagacactcaatgattttcacttacccaaggtgtttac-aatgtttcccaacccaagagaac 41649244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 83 - 170
Target Start/End: Complemental strand, 48408818 - 48408733
Alignment:
Q  83 tttctcaatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaacctct 170  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||| |||||||| ||| ||||||||||||||||| |||| ||||    
T  48408818 tttcccaatctcaccaatgaacaagacactcaatgattttcactcac-caaggtgtttac-aatgtttcccaacccaagagaaactct 48408733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 69 - 166
Target Start/End: Original strand, 2761439 - 2761536
Alignment:
Q  69 ctaatttctaccacttt-ctcaatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaac 166  Q
    ||||||||||||| ||| | |||||||||||||||||| ||||||| ||||||||||||||| ||| |||| ||| ||||||||||||||||| |||||    
T  2761439 ctaatttctaccaattttcccaatctcaccaatgaacaagacactcgatgattttcactcacccaatgtgtttac-aatgtttcccaacccaagagaac 2761536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 8359378 - 8359541
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaaga---gttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctacc-actttctcaa 90  Q
    ||||||||||||||||||||||| |||||| |   |||||| ||| |||| || ||||| |||||||||      |||||||||||||| | |||| |||    
T  8359378 ctatcaatgagttcttacaaagagatacaaaatgggttacaagaaattagtttaaacaa-gctcacaaagaaaaaccctaatttctacccattttcccaa 8359476  T
Q  91 tctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaac 156  Q
    |||| |||||||||| |||||||| |||||||||||| |||||||||| ||||| ||||| |||||    
T  8359477 tctccccaatgaacaagacactca-tgattttcactctctcaaggtgtttacaattgttttccaac 8359541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 3 - 144
Target Start/End: Original strand, 31105457 - 31105606
Alignment:
Q  3 atcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaacc------ctaatttctacc-actttctcaatct 93  Q
    ||||||||||||||||||| | ||||||  | |||||| ||| ||||||||||||| |||||||||        |||||||||||| | |||| ||||||    
T  31105457 atcaatgagttcttacaaaaagatacaaatgggttacaagaaattagcttcaacaa-gctcacaaagaaaaaatctaatttctacccattttcccaatct 31105555  T
Q  94 caccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaa 144  Q
    ||| |||||||| ||||||||||||||||||||||| |||||||| |||||    
T  31105556 cacaaatgaacaagacactcaatgattttcactcacccaaggtgtttacaa 31105606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 6432077 - 6431915
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaac------cctaatttctacc-actttctcaat 91  Q
    ||||||| ||||||||||||||| ||||||  | |||||| ||| ||||||||||||| |||||||||       ||||||||||||| | |||| ||||    
T  6432077 ctatcaacgagttcttacaaagagatacaaatgggttacaagaaattagcttcaacaa-gctcacaaagaacaatcctaatttctacccattttcccaat 6431979  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaac 156  Q
    || ||||||||||| |||||||| |||||||||||| | ||| |||| ||||| |||||||||||    
T  6431978 ctaaccaatgaacaagacactca-tgattttcactctcccaatgtgtttacaattgtttcccaac 6431915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 19502284 - 19502112
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctaccactttctc--aa 90  Q
    ||||||||||||||||||||||| ||||||  |||||||| ||| |||||||  |||| |||||||||      || ||||||||| |  ||| ||  ||    
T  19502284 ctatcaatgagttcttacaaagagatacaaaagagttacaagaaattagctttgacaa-gctcacaaaaaacaaccttaatttctaaccttttttcgcaa 19502186  T
Q  91 tctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaac 166  Q
    |||||||| |||||| |||||||||||||| |||||||| |||||||| ||| ||||||||||||||||| |||||    
T  19502185 tctcaccactgaacaagacactcaatgattctcactcac-caaggtgtttac-aatgtttcccaacccaagagaac 19502112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 22270079 - 22269920
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctacc-actttctcaat 91  Q
    |||||||| |||||||||||||| ||||||  | |||||| ||| ||||||||||||| |||||||||      |||||||||||||| | |||| ||||    
T  22270079 ctatcaatcagttcttacaaagagatacaaatgggttacaagaaattagcttcaacaa-gctcacaaagaacaaccctaatttctacccattttcccaat 22269981  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcc 152  Q
    |||||||||||||| ||||||||   |||||||||| | |||||||| || || |||||||    
T  22269980 ctcaccaatgaacaagacactcatgaattttcactctcccaaggtgtttagaattgtttcc 22269920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 34310778 - 34310940
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctacc-actttctcaat 91  Q
    ||||||||||||||||||||| | ||||||  | |||||| ||| |||||||||||||   |||||||      |||||||||||||| | |||| ||||    
T  34310778 ctatcaatgagttcttacaaaaagatacaaatgtgttacaagaaattagcttcaacaatt-tcacaaagaacaaccctaatttctacccattttcccaat 34310876  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaac 156  Q
    |||||||||||||| ||||||| ||||||||||||| | |||||||| ||||| | |||||||||    
T  34310877 ctcaccaatgaacaagacactc-atgattttcactctcccaaggtgtttacaattatttcccaac 34310940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 48599396 - 48599558
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctacc-actttctcaat 91  Q
    ||||||||||| |||| |||||| ||||||  |||||||| ||| ||||||||||||| |||||||||      |||||||||||||| | |||| ||||    
T  48599396 ctatcaatgagctcttccaaagagatacaaatgagttacaagaaattagcttcaacaa-gctcacaaagaacaaccctaatttctacccattttcccaat 48599494  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaac 156  Q
     ||||||||||||| |||| ||| ||||||||||||   |||||||| ||||| |||||||||||    
T  48599495 atcaccaatgaacaagacaatca-tgattttcactcctccaaggtgtttacaattgtttcccaac 48599558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 496045 - 496217
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctacc-actttctcaat 91  Q
    ||||||||||||||||| ||||| ||||||  | ||| || ||| ||||||||||||| |||||||||      |||||||||||||| | |||| ||||    
T  496045 ctatcaatgagttcttataaagagatacaaatgggttgcaagaaattagcttcaacaa-gctcacaaagaactaccctaatttctacccattttcccaat 496143  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaac 166  Q
    ||||| ||| ||||  ||||| |||||||||||||||| |||||| | ||| |||||||||||| |||| |||||    
T  496144 ctcacaaattaacaaaacactaaatgattttcactcacccaaggtttttac-aatgtttcccaatccaagagaac 496217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 88 - 167
Target Start/End: Original strand, 36574672 - 36574751
Alignment:
Q  88 caatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaacc 167  Q
    ||||||| ||||| |||| ||||||| || ||||||||||||  ||||||| ||||||||||| ||||||||| ||||||    
T  36574672 caatctctccaataaacaagacactcgataattttcactcacctaaggtgtttacaaatgttttccaacccaagagaacc 36574751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 3259101 - 3258938
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctacc-actttctcaat 91  Q
    ||||||||| ||| ||||||||| ||||||  ||||||||  || ||||||| ||||| |||||||||      ||||| |||||||| | |||| ||||    
T  3259101 ctatcaatgggtttttacaaagagatacaaatgagttacaataaattagcttaaacaa-gctcacaaagaacaaccctagtttctacccattttcccaat 3259003  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaac 156  Q
    |||||||||||||| ||||||||   |||||||||  | |||||||| ||||| |||||||||||    
T  3259002 ctcaccaatgaacaagacactcatgaattttcactttcccaaggtgtttacaattgtttcccaac 3258938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 4510610 - 4510772
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctacc-actttctcaat 91  Q
    ||||||||||||||||| ||||| ||||||  | |||||| ||| |||||||||| ||| ||||||||      || ||||||||||| | ||||  |||    
T  4510610 ctatcaatgagttcttataaagagatacaaatgggttacaagaaattagcttcaataaa-ctcacaaagaacaaccttaatttctacccattttccaaat 4510708  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaac 156  Q
    ||||||||| |||| | |||||| |||||||||||| | |||||||| ||||| |||||||||||    
T  4510709 ctcaccaatcaacaaggcactca-tgattttcactctcccaaggtgtttacaattgtttcccaac 4510772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 4512452 - 4512614
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctacc-actttctcaat 91  Q
    ||||||||||||||||| ||||| ||||||  | |||||| ||| |||||||||| ||| ||||||||      || ||||||||||| | ||||  |||    
T  4512452 ctatcaatgagttcttataaagagatacaaatgggttacaagaaattagcttcaataaa-ctcacaaagaacaaccttaatttctacccattttccaaat 4512550  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaac 156  Q
    ||||||||| |||| | |||||| |||||||||||| | |||||||| ||||| |||||||||||    
T  4512551 ctcaccaatcaacaaggcactca-tgattttcactctcccaaggtgtttacaattgtttcccaac 4512614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 23565123 - 23565298
Alignment:
Q  1 ctatcaatgagttcttacaaagatatac--aagagttacacgaatttagcttcaacaaagctcacaaa-------ccctaatttctacc-actttctc-- 88  Q
    ||||||||||||||||||||||| ||||  |||||||||| ||| |||| |||||| |||||||||||        ||||||||||||| | ||| ||      
T  23565123 ctatcaatgagttcttacaaagagatacaaaagagttacaagaaattagtttcaac-aagctcacaaagaacaagacctaatttctacctattttttcct 23565221  T
Q  89 aatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaacct 168  Q
    ||||||||||||||||| ||||||   | || ||||||||| |||||||| ||||||||||| | || |||| |||||||    
T  23565222 aatctcaccaatgaacaagacact---tcatgttcactcacccaaggtgtttacaaatgttttctaaaccaagagaacct 23565298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 7 - 156
Target Start/End: Complemental strand, 2390382 - 2390226
Alignment:
Q  7 atgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctaccactttctc-aatctcacc 97  Q
    ||||||| ||||||||| ||||||  | |||||| ||| ||||||||||||| |||||||||      ||||||||||||||  ||| || ||| |||||    
T  2390382 atgagttattacaaagagatacaaatgggttacaagaaattagcttcaacaa-gctcacaaagaacaaccctaatttctacccatttttcgaatttcacc 2390284  T
Q  98 aatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaac 156  Q
    |||||||| |||||| | |||||||| ||| | |||||||| ||||| |||||||||||    
T  2390283 aatgaacaagacactta-tgattttcgctctcccaaggtgtttacaattgtttcccaac 2390226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 182 - 245
Target Start/End: Original strand, 30024969 - 30025032
Alignment:
Q  182 taatcaaagactctcaaccctaaaattaccttatttgatttcctaactttctctctcttaaagc 245  Q
    ||||||||||| |||||||||||| ||||||  |||||||||| || |||||||||||| ||||    
T  30024969 taatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttcaagc 30025032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 107 - 170
Target Start/End: Complemental strand, 39731368 - 39731307
Alignment:
Q  107 gacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaacctct 170  Q
    ||||||||||||||||||||||| |||||||| ||| ||||||||||||||||| |||| ||||    
T  39731368 gacactcaatgattttcactcac-caaggtgtttac-aatgtttcccaacccaagagaagctct 39731307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 243
Target Start/End: Original strand, 3904748 - 3904927
Alignment:
Q  62 acaaaccctaatttctaccactttctcaatctc-accaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaa 160  Q
    ||||| |||||||||||||| |||| |||||||  || | ||||| || ||||||||| |||||||| | |||||||| ||||||||||||  ||| |||    
T  3904748 acaaaacctaatttctaccattttcccaatctcttcctaagaacaagagactcaatga-tttcactcgcccaaggtgtttacaaatgtttcttaactcaa 3904846  T
Q  161 tagaacctctcaaaagagcattaatcaaagactctcaaccctaaaattaccttatttgatttcctaactttctctctcttaaa 243  Q
     ||||  |||||| | | |  | | |||| | ||||||||||||||| ||||  |||||||| |||| |||||||||||||||    
T  3904847 gagaatgtctcaagataac-ctcaccaaaaattctcaaccctaaaatcacctcctttgattt-ctaagtttctctctcttaaa 3904927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 120 - 300
Target Start/End: Complemental strand, 18396294 - 18396114
Alignment:
Q  120 tttcactcactcaaggtgtatacaaatgtttcccaacccaatagaacctctcaaaagagcat-taatcaaagactctcaaccctaaaattaccttatttg 218  Q
    |||||||||| |||||||| ||||||||||||  ||| ||| |||||| ||||| ||| ||  | | |||||||  |||||| |||| ||||||  || |    
T  18396294 tttcactcacccaaggtgtttacaaatgtttcataactcaaaagaaccactcaatagaacacatcaccaaagacattcaacc-taaagttacctcctt-g 18396197  T
Q  219 atttcctaactttctctctcttaaagc-cttcaaaaaacatgaagaatgaagcattttataatgtacaagatccgagaaaatc 300  Q
    || ||| || |||||||||||| |||| || |  ||||||||||||||||||  || ||||||| ||||| ||||||||||||    
T  18396196 atatccaaagtttctctctcttgaagctctacttaaaacatgaagaatgaagtcttatataatgcacaagttccgagaaaatc 18396114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 102 - 156
Target Start/End: Original strand, 22328568 - 22328622
Alignment:
Q  102 aacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaac 156  Q
    |||| |||||||||||||||||| || |||||||||| ||||| |||||||||||    
T  22328568 aacaagacactcaatgattttcattccctcaaggtgtttacaattgtttcccaac 22328622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 97 - 155
Target Start/End: Original strand, 25767124 - 25767180
Alignment:
Q  97 caatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaa 155  Q
    ||||||||| ||||||||||||||||||||||| |||||||| ||| ||||||||||||    
T  25767124 caatgaacaagacactcaatgattttcactcac-caaggtgtttac-aatgtttcccaa 25767180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 246
Target Start/End: Original strand, 14070070 - 14070134
Alignment:
Q  182 taatcaaagactctcaaccctaaaattaccttatttgatttcctaactttctctctcttaaagcc 246  Q
    ||||||||||| |||| ||||||| ||||||  |||||||||| || |||||||||||| |||||    
T  14070070 taatcaaagaccctcagccctaaagttacctcctttgatttcccaagtttctctctcttcaagcc 14070134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 246
Target Start/End: Original strand, 14380098 - 14380162
Alignment:
Q  182 taatcaaagactctcaaccctaaaattaccttatttgatttcctaactttctctctcttaaagcc 246  Q
    ||||||||||| |||| ||||||| ||||||  |||||||||| || |||||||||||| |||||    
T  14380098 taatcaaagaccctcagccctaaagttacctcctttgatttcccaagtttctctctcttcaagcc 14380162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 32358116 - 32358182
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa 66  Q
    ||||||||||||||||||||||| ||||||  | |||||| ||| ||||||||||| |||||||||||    
T  32358116 ctatcaatgagttcttacaaagagatacaaatgggttacaagaaattagcttcaac-aagctcacaaa 32358182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 4538777 - 4538828
Alignment:
Q  182 taatcaaagactctcaaccctaaaattaccttatttgatttcctaactttct 233  Q
    ||||||||||||||||||| |||||||||||  |||||||||| || |||||    
T  4538777 taatcaaagactctcaaccttaaaattacctcctttgatttcccaagtttct 4538828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 182 - 237
Target Start/End: Complemental strand, 18126575 - 18126520
Alignment:
Q  182 taatcaaagactctcaaccctaaaattaccttatttgatttcctaactttctctct 237  Q
    ||||||||||| |||||||||||| ||||||  |||||||||| || |||||||||    
T  18126575 taatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctct 18126520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 182 - 245
Target Start/End: Complemental strand, 19502109 - 19502046
Alignment:
Q  182 taatcaaagactctcaaccctaaaattaccttatttgatttcctaactttctctctcttaaagc 245  Q
    ||||||||||| |||||||||||| |||||| ||||||||||  || ||| |||||||| ||||    
T  19502109 taatcaaagaccctcaaccctaaagttacctcatttgatttctcaagtttgtctctctttaagc 19502046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 107 - 166
Target Start/End: Complemental strand, 25615855 - 25615797
Alignment:
Q  107 gacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaac 166  Q
    ||||||||||||||||| ||||| |||||||| ||| ||||||| ||||||||| |||||    
T  25615855 gacactcaatgattttctctcacccaaggtgtttac-aatgttttccaacccaagagaac 25615797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 182 - 245
Target Start/End: Original strand, 47676373 - 47676436
Alignment:
Q  182 taatcaaagactctcaaccctaaaattaccttatttgatttcctaactttctctctcttaaagc 245  Q
    ||||||||||| |||||||||||| ||| ||  |||||||||| || |||||||||||| ||||    
T  47676373 taatcaaagaccctcaaccctaaagttatctcctttgatttcccaagtttctctctcttcaagc 47676436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 240
Target Start/End: Complemental strand, 1113588 - 1113530
Alignment:
Q  182 taatcaaagactctcaaccctaaaattaccttatttgatttcctaactttctctctctt 240  Q
    ||||||||||| |||||||||||| |||| |  |||||||||| || ||||||||||||    
T  1113588 taatcaaagaccctcaaccctaaagttacttcctttgatttcccaagtttctctctctt 1113530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 2759259 - 2759316
Alignment:
Q  1 ctatcaatgagttcttacaa--agatatacaagagttacacgaatttagcttcaacaa 56  Q
    ||||||||||||||||||||  ||||||| | |||||||| ||| |||||||||||||    
T  2759259 ctatcaatgagttcttacaaagagatataaatgagttacaagaaattagcttcaacaa 2759316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 6360014 - 6360071
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaa 56  Q
    ||||||||||||||||||||||| ||||||  | |||||| ||| |||||||||||||    
T  6360014 ctatcaatgagttcttacaaagagatacaaatgggttacaagaaattagcttcaacaa 6360071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 99
Target Start/End: Original strand, 6594690 - 6594727
Alignment:
Q  62 acaaaccctaatttctaccactttctcaatctcaccaa 99  Q
    ||||||||||||||||||| ||||| ||||||||||||    
T  6594690 acaaaccctaatttctacccctttcccaatctcaccaa 6594727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 99
Target Start/End: Original strand, 18388892 - 18388929
Alignment:
Q  62 acaaaccctaatttctaccactttctcaatctcaccaa 99  Q
    ||||||||||||||||||| ||||| ||||||||||||    
T  18388892 acaaaccctaatttctacccctttcccaatctcaccaa 18388929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 99
Target Start/End: Original strand, 18392328 - 18392365
Alignment:
Q  62 acaaaccctaatttctaccactttctcaatctcaccaa 99  Q
    ||||||||||||||||||| ||||| ||||||||||||    
T  18392328 acaaaccctaatttctacccctttcccaatctcaccaa 18392365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 99
Target Start/End: Original strand, 32060456 - 32060493
Alignment:
Q  62 acaaaccctaatttctaccactttctcaatctcaccaa 99  Q
    ||||||||||||||||||| ||||| ||||||||||||    
T  32060456 acaaaccctaatttctacccctttcccaatctcaccaa 32060493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 102; Significance: 1e-50; HSPs: 74)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 62 - 270
Target Start/End: Original strand, 29196517 - 29196726
Alignment:
Q  62 acaaaccctaatttctacc-actttctcaatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaa 160  Q
    ||||||||||||||||||| | |||| |||||||||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  29196517 acaaaccctaatttctacccattttcccaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaaatgtttcccaacccaa 29196616  T
Q  161 tagaacctctcaaaagagcattaatcaaagactctcaaccctaaaattaccttatttgatttcctaactttctctctcttaaagccttcaaaaaacatga 260  Q
     |||||||||||| | | |  ||||||||||| |||||||||||| ||||||  |||||||||| || ||| ||||||||  |||  ||  |||| ||||    
T  29196617 gagaacctctcaagaaaaccctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttttctctcttgtagctctctcaaaaaatga 29196716  T
Q  261 agaatgaagc 270  Q
    ||||||||||    
T  29196717 agaatgaagc 29196726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 270
Target Start/End: Original strand, 44700540 - 44700817
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaaga--gttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctacc-actttctcaat 91  Q
    ||||||| ||||||||||||||| ||||||    |||||| ||| |||||||||||||| ||||||||      |||||||||||||| | |||| ||||    
T  44700540 ctatcaaagagttcttacaaagagatacaaataggttacaagaaattagcttcaacaaa-ctcacaaagaacaaccctaatttctacccattttcccaat 44700638  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaacctctcaaaagagcattaatcaaaga 191  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||||| |||||| ||||| | | |  ||||||||||    
T  44700639 ctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaaatgtttcccaacccaagagaacccctcaagataaccctaatcaaaga 44700738  T
Q  192 ctctcaaccctaaaattaccttatttgatttcctaactttctctctcttaaagc-cttcaaaaaacatgaagaatgaagc 270  Q
    |  ||||||||||| ||||||  ||||||||||  | |||||||||||| |||| ||||  |||| ||||||||||||||    
T  44700739 ccatcaaccctaaagttacctcctttgatttccctagtttctctctcttgaagctcttctcaaaa-atgaagaatgaagc 44700817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 83 - 270
Target Start/End: Original strand, 2075209 - 2075395
Alignment:
Q  83 tttctcaatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaacctctcaaaagagcatt 182  Q
    |||| |||| ||||||||||||| ||||||||||||||||||||||  |||||||| || |||||||||||||||||| | ||| |||||||||| |  |    
T  2075209 tttcccaatatcaccaatgaacaagacactcaatgattttcactcag-caaggtgtttataaatgtttcccaacccaagataacttctcaaaagaactct 2075307  T
Q  183 aatcaaagactctcaaccctaaaattaccttatttgatttcctaactttctctctcttaaagcct-tcaaaaaacatgaagaatgaagc 270  Q
    ||||||||||||||||||||||| ||| || ||||||||||| || |||||||||||| ||||||  |  |||||||||||||||||||    
T  2075308 aatcaaagactctcaaccctaaagtta-ctcatttgatttcccaagtttctctctcttgaagcctcactcaaaacatgaagaatgaagc 2075395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 2 - 166
Target Start/End: Original strand, 5236519 - 5236690
Alignment:
Q  2 tatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctacc-actttctcaatc 92  Q
    |||||||||||||||||||||| ||||||  | |||||| ||| ||||||||||||| | |||||||      |||||||||||||| | |||| |||||    
T  5236519 tatcaatgagttcttacaaagagatacaaatgggttacaagaaattagcttcaacaa-gttcacaaagaacaaccctaatttctacccattttcccaatc 5236617  T
Q  93 tcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaac 166  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||| ||| ||||||||||||||||| |||||    
T  5236618 tcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaacccaagagaac 5236690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 31314551 - 31314335
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaa------accctaatttctacc-actttctcaat 91  Q
    ||||||| ||||||||||||| | ||||||  | |||||| ||| ||||||||||||| | ||||||      ||||||||||||||| | |||||||||    
T  31314551 ctatcaaagagttcttacaaaaagatacaaatgggttacaagaaattagcttcaacaa-gatcacaatgaacaaccctaatttctacccattttctcaat 31314453  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaacctctcaaaagagcattaatcaaaga 191  Q
    |||||| ||||||| ||||||||||||||||||||||| ||| |||| ||| ||||||||||||||||| |||||| ||||| ||| |  ||||||||||    
T  31314452 ctcacctatgaacaagacactcaatgattttcactcacccaaagtgtttac-aatgtttcccaacccaagagaacccctcaagagaaccctaatcaaaga 31314354  T
Q  192 ctctcaaccctaaaattac 210  Q
    |  ||||| ||||| ||||    
T  31314353 caatcaactctaaagttac 31314335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 40734604 - 40734432
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctacc-actttctcaat 91  Q
    ||||||||||||||||||||||  ||||||  | |||||| ||| |||| |||||||| |||||||||      |||||||||||||| | |||| ||||    
T  40734604 ctatcaatgagttcttacaaagggatacaaatgtgttacaagaaattaggttcaacaa-gctcacaaagaacaaccctaatttctacccattttcccaat 40734506  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaac 166  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||| ||| ||||||||||||||||| |||||    
T  40734505 ctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaacccaagagaac 40734432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 45095269 - 45095099
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaagag--ttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctaccactttctcaatc 92  Q
    ||||||||||||||||||||||| |||||| ||  ||||| ||| |||||||  |||| | |||||||      ||||||||||||||| |||| |||||    
T  45095269 ctatcaatgagttcttacaaagagatacaaaagggttacaagaaattagctttgacaa-gttcacaaagaacaaccctaatttctaccattttcccaatc 45095171  T
Q  93 tcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaac 166  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||| ||| ||||||||||||||||| |||||    
T  45095170 tcaccaatgaacaagacactcaatgattttcactcac-caaggtgtttac-aatgtttcccaacccaagagaac 45095099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 44331651 - 44331479
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaagag--ttacacgaatttagcttcaacaaagctcacaa------accctaatttctacc-actttctcaat 91  Q
    |||||||| |||||||||||||| ||||||  |  ||||| ||| ||||||||||||| ||||||||      ||||||||||||||| | ||||  |||    
T  44331651 ctatcaataagttcttacaaagagatacaaatggcttacaagaaattagcttcaacaa-gctcacaatgaacaaccctaatttctacccattttcctaat 44331553  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaac 166  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||| ||| ||||||||||||||||| |||||    
T  44331552 ctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaacccaagagaac 44331479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 4570058 - 4569895
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaa------accctaatttctacc-actttctcaat 91  Q
    ||||||||||||||||||||||| ||||||  |||||||| ||| |||||||||| || ||||||||      ||||||||||||||| | |||| ||||    
T  4570058 ctatcaatgagttcttacaaagagatacaaatgagttacaagaaattagcttcaataa-gctcacaatgaacaaccctaatttctacccattttcccaat 4569960  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaac 156  Q
    |||||||| |||||  |||||||||||||||||||||| |||||||| ||||| ||||| |||||    
T  4569959 ctcaccaaagaacaaaacactcaatgattttcactcacccaaggtgtttacaattgttttccaac 4569895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 62 - 156
Target Start/End: Original strand, 5434007 - 5434102
Alignment:
Q  62 acaaaccctaatttctaccactttctc--aatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaac 156  Q
    |||||||||||||||||||| ||||||  ||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||| |||||||||||    
T  5434007 acaaaccctaatttctaccattttctcccaatctcaccaatgaacaagacactcaatgattttcactcac-caaggtgtttacaattgtttcccaac 5434102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 7762371 - 7762200
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctaccacttt-ctcaat 91  Q
    ||||||||||||||||||||||| ||||||  |||||||| ||| ||||||||||||| | |||||||      ||||||||||||||  ||| ||||||    
T  7762371 ctatcaatgagttcttacaaagagatacaaaagagttacaagaaattagcttcaacaa-gttcacaaagaacaaccctaatttctaccctttttctcaat 7762273  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaac 166  Q
    |||||||||||| | ||||||||||||||||||||||| ||||||||  || ||| ||||||||||||| |||||    
T  7762272 ctcaccaatgaataagacactcaatgattttcactcac-caaggtgttcac-aatatttcccaacccaagagaac 7762200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 53921565 - 53921803
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaac------cctaatttctaccactttctc-aat 91  Q
    |||||||||||||||||||||   ||||||  |||||||| ||| ||||||| ||||| ||||||||||      |||||||||||||  ||| || |||    
T  53921565 ctatcaatgagttcttacaaaatgatacaaatgagttacaagaaattagctttaacaa-gctcacaaacaacaaacctaatttctacccatttttccaat 53921663  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaacctctcaaaagagcattaatcaaaga 191  Q
    |||||||||||||| ||||||||||||||||||||||| |||||| | ||| ||||||| ||||||||| | ||||              ||||||||||    
T  53921664 ctcaccaatgaacaagacactcaatgattttcactcacccaaggtttttac-aatgttttccaacccaagaaaacc-------------ctaatcaaaga 53921749  T
Q  192 ctctcaaccctaaaattaccttatttgatttcctaactttctctctcttaaagc 245  Q
    |||||||||||||| |||||| ||||||||||| || ||| |||||||| ||||    
T  53921750 ctctcaaccctaaagttacctcatttgatttcccaagtttttctctcttcaagc 53921803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 40735489 - 40735256
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaaga--gttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctacc-actttctcaat 91  Q
    ||||||||||||||||||||||| ||||||    ||||||  || ||||||||||||| |||||||||      |||||||||||||| | |||||||||    
T  40735489 ctatcaatgagttcttacaaagagatacaaactggttacaataaattagcttcaacaa-gctcacaaagaacaaccctaatttctacccattttctcaat 40735391  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaacctctcaaaagagcattaatcaaaga 191  Q
    |||||||||||||| ||||||||||||||||||||    |||||||| ||| ||||||||| ||||||| ||||             | |||||||||||    
T  40735390 ctcaccaatgaacaagacactcaatgattttcacttttccaaggtgtttac-aatgtttcctaacccaagagaa-------------ctttaatcaaaga 40735305  T
Q  192 ctctcaaccctaaaattaccttatttgatttcctaactttctctctctt 240  Q
    | |||||||||||| ||||||  |||||||||| || ||||||||||||    
T  40735304 ccctcaaccctaaagttacctcctttgatttcccaagtttctctctctt 40735256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 19683951 - 19684123
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaagag--ttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctacc-actttctcaat 91  Q
    ||||||||||||||||||||||| |||||| ||  ||||| ||| |||||||  |||| | |||||||      |||||||||||||| | |||| ||||    
T  19683951 ctatcaatgagttcttacaaagagatacaaaagggttacaagaaattagctttgacaa-gttcacaaagaacaaccctaatttctacccattttcccaat 19684049  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaac 166  Q
    ||||| |||||||| |||| |||||||||||||||||| |||||||| ||| ||||||||||||||||| |||||    
T  19684050 ctcacaaatgaacaagacattcaatgattttcactcacccaaggtgtttac-aatgtttcccaacccaagagaac 19684123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 7764570 - 7764403
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctaccactttctcaatc 92  Q
    ||||||||||||||||||||||| ||||||  |||||||| ||| ||||||| ||||| | |||||||      ||||||||||||||  |||| |  ||    
T  7764570 ctatcaatgagttcttacaaagagatacaaaagagttacaagaaattagctttaacaa-gttcacaaagaacaaccctaatttctacccttttccc--tc 7764474  T
Q  93 tcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaa 165  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||| ||| ||||||||| ||||||| ||||    
T  7764473 tcaccaatgaacaagacactcaatgattttcactcac-caaggtgtttac-aatgtttcctaacccaagagaa 7764403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 32891210 - 32891036
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaac-------cctaatttctacc-actttctcaa 90  Q
    ||||||| ||||||||||||||| ||||||  |||||||| ||| ||||||||||||| |||||||||        | ||||||||||| | ||||||||    
T  32891210 ctatcaacgagttcttacaaagagatacaaatgagttacaagaaattagcttcaacaa-gctcacaaagaacaaaacttaatttctacccattttctcaa 32891112  T
Q  91 tctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaacc 167  Q
    ||||||| | ||||| |||||||||||||||| |||||| |||||||| ||| ||||||||||| ||||| ||||||    
T  32891111 tctcaccgaagaacaagacactcaatgatttttactcacccaaggtgtttac-aatgtttcccaccccaagagaacc 32891036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 51398920 - 51398754
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctaccactttctc-aat 91  Q
    ||||||||||||||||||||||| ||||||  |||||||| ||| ||||||||||||| | |||| ||      ||||||||||||||  ||| || |||    
T  51398920 ctatcaatgagttcttacaaagagatacaaatgagttacaagaaattagcttcaacaa-gttcactaagaacaaccctaatttctacccatttttccaat 51398822  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaa 160  Q
    |||| ||||||||| ||||||||||||||||||||||  |||||||| ||| ||| |||||||||||||    
T  51398821 ctcatcaatgaacaagacactcaatgattttcactcatccaaggtgtttac-aatatttcccaacccaa 51398754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 54593810 - 54593648
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctac-cactttctcaat 91  Q
    ||||||||||||||||||||||| ||||||  | ||||||  || ||||||||||||| |||||||||      ||||||||||| | || |||| ||||    
T  54593810 ctatcaatgagttcttacaaagagatacaaatgggttacaataaattagcttcaacaa-gctcacaaagaacaaccctaatttctgcacattttcccaat 54593712  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaac 156  Q
    |||||||||||||| |||||||| |||||||||||| | |||||||| ||||| |||||||||||    
T  54593711 ctcaccaatgaacaagacactca-tgattttcactctcccaaggtgtttacaattgtttcccaac 54593648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 760953 - 760781
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaac------cctaatttctacc-actttctcaat 91  Q
    ||||||||||||||||||||||  ||||||  | |||||| ||| ||||||| ||||| |||||||||       ||||||||||||| | |||| ||||    
T  760953 ctatcaatgagttcttacaaagggatacaaatgggttacaagaaattagcttaaacaa-gctcacaaagaacagacctaatttctacccattttcccaat 760855  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaac 166  Q
    ||||| |||||||| ||||||||||||||||||||||  |||||||| ||  ||||||||||||||||| |||||    
T  760854 ctcacaaatgaacaagacactcaatgattttcactcatccaaggtgttta-taatgtttcccaacccaagagaac 760781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 65 - 166
Target Start/End: Original strand, 5258277 - 5258378
Alignment:
Q  65 aaccctaatttctaccactttctc--aatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaata 162  Q
    ||||||||||||||||  ||| ||  ||||||||||||||||| ||||||||||||||||||||||| |||||||| ||| ||||||||||||||||| |    
T  5258277 aaccctaatttctacccttttttcccaatctcaccaatgaacaagacactcaatgattttcactcac-caaggtgtttac-aatgtttcccaacccaaga 5258374  T
Q  163 gaac 166  Q
    ||||    
T  5258375 gaac 5258378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 88 - 156
Target Start/End: Original strand, 9666624 - 9666692
Alignment:
Q  88 caatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaac 156  Q
    ||||||||| |||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  9666624 caatctcacaaatgaacaagacactcaatgattttcactcacccaaggtgtttacaaatgtttcccaac 9666692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 22835064 - 22835236
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaac------cctaatttctacc-actttctcaat 91  Q
    ||||||||||||||||||||||  ||||||  | |||||| ||| ||||||| ||||| |||||||||       ||||||||||||| | |||| ||||    
T  22835064 ctatcaatgagttcttacaaagggatacaaatgggttacaagaaattagcttaaacaa-gctcacaaagaacaaacctaatttctacccattttcccaat 22835162  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaac 166  Q
    ||||| |||||||| ||||||||||||||||||||||| |||||||  ||| ||||||||||||| ||| |||||    
T  22835163 ctcacaaatgaacaagacactcaatgattttcactcacccaaggtgattac-aatgtttcccaacacaagagaac 22835236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 29810974 - 29810802
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctacc-actttctcaat 91  Q
    ||||||||||||||||||||||| ||||||  | |||||| ||| ||||||||||||| | |||||||      | |||||||||||  | ||||  |||    
T  29810974 ctatcaatgagttcttacaaagagatacaaatgggttacaagaaattagcttcaacaa-gttcacaaagaacaactctaatttctacatattttcctaat 29810876  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaac 166  Q
    |||||||||||| | |||| |||||||||||||||||| |||||||| ||| ||||||||||||||||| |||||    
T  29810875 ctcaccaatgaataagacattcaatgattttcactcacccaaggtgtttac-aatgtttcccaacccaaaagaac 29810802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 37408564 - 37408393
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaagag--ttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctaccacttt-ctcaat 91  Q
    ||||||||||||||||||||||| |||||| ||  ||||| ||| |||||||  |||| | |||||||      ||||||||||||||  ||| | ||||    
T  37408564 ctatcaatgagttcttacaaagagatacaaaagggttacaagaaattagctttgacaa-gttcacaaagaacaaccctaatttctaccctttttcccaat 37408466  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaac 166  Q
    |||||||||||||| |||||||||| ||||||||||||| ||||||| ||| ||||||||||||||||| |||||    
T  37408465 ctcaccaatgaacaagacactcaataattttcactcact-aaggtgtttac-aatgtttcccaacccaagagaac 37408393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 39153423 - 39153595
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaa------accctaatttctacc-actttctcaat 91  Q
    ||||||||||||||||| ||||  ||||||  |||||||| ||| ||||||| ||||| ||||||||      | ||||||||||||| | |||| ||||    
T  39153423 ctatcaatgagttcttataaagggatacaaatgagttacaagaaattagcttaaacaa-gctcacaatgaacaaacctaatttctacccattttcccaat 39153521  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaac 166  Q
    |||||  ||||||| |||||||||||||||||| |||| |||||||| ||| ||||||||||||||||| |||||    
T  39153522 ctcacacatgaacaagacactcaatgattttcattcacccaaggtgtttac-aatgtttcccaacccaagagaac 39153595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 43401863 - 43402026
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaaga---gttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctacc-actttctcaa 90  Q
    ||||||||||||||||||||||| ||| || |   |||||| ||| ||||||||||||| |||||||||      |||||||||||||| | |||| |||    
T  43401863 ctatcaatgagttcttacaaagagataaaaaatgcgttacaagaaattagcttcaacaa-gctcacaaagaacaaccctaatttctacccattttcccaa 43401961  T
Q  91 tctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaac 156  Q
    ||||||||||||||| ||||||| ||||||||||||| | |||||||| |||||  ||||||||||    
T  43401962 tctcaccaatgaacaagacactc-atgattttcactctcccaaggtgtttacaatcgtttcccaac 43402026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 9581388 - 9581217
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaac------cctaatttctaccactttctcaatc 92  Q
    ||||||||||||||||||||||  ||||||  | |||| | ||| ||||||| ||||| |||||||||       |||||||||||||  ||||  ||||    
T  9581388 ctatcaatgagttcttacaaagggatacaaatgggttaaaagaaattagcttaaacaa-gctcacaaagaacaaacctaatttctacccatttccgaatc 9581290  T
Q  93 tcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaac 166  Q
     ||| |||||||| ||||||||||||||||||||||| |||||||| ||| ||||||||||||||||| |||||    
T  9581289 ccacaaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaacccaagagaac 9581217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 34491318 - 34491157
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcaca------aaccctaatttcta-ccactttctcaat 91  Q
    ||||||||||||||||||||||| ||||||  |||||||| ||| ||||||||||| |||||||||      |||||||||||||| ||| |||| ||||    
T  34491318 ctatcaatgagttcttacaaagagatacaaatgagttacaagaaattagcttcaac-aagctcacaaagaacaaccctaatttctacccattttcccaat 34491220  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaac 156  Q
    |||||||||||| |  |||||||  || |||||||| | |||||||| ||||| |||||||||||    
T  34491219 ctcaccaatgaataacacactca--gaatttcactctcccaaggtgtttacaattgtttcccaac 34491157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 46860580 - 46860416
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaac------cctaatttctacc-actttctcaat 91  Q
    ||||||||||||| ||||||||| ||||||  | |||||| ||| ||||||||||||| |||||||||       ||||||||||||| | |||||||||    
T  46860580 ctatcaatgagttattacaaagagatacaaatgggttacaagaaattagcttcaacaa-gctcacaaagaacaaacctaatttctacccattttctcaat 46860482  T
Q  92 ctcaccaatgaacatgacactcaatg-attttcactcactcaaggtgtatacaaatgtttcccaac 156  Q
    |||||||||||||| |||||||| || |||||||||| | |||||||| ||||| |||||| ||||    
T  46860481 ctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttctcaac 46860416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 30236231 - 30236069
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaaga--gttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctacc-actttctcaat 91  Q
    ||||||||||||||||||||||| ||||||    |||||| ||| ||||||||||||| |||||||||      |||||||||||||| | |||| ||||    
T  30236231 ctatcaatgagttcttacaaagagatacaaataggttacaagaaattagcttcaacaa-gctcacaaagaacaaccctaatttctacccattttcccaat 30236133  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaac 156  Q
    |||| ||||||||| |||||||| |||||||||||  | |||||||| ||||| |||||||||||    
T  30236132 ctcatcaatgaacaagacactca-tgattttcactatcccaaggtgtttacaattgtttcccaac 30236069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 70 - 166
Target Start/End: Complemental strand, 29682389 - 29682293
Alignment:
Q  70 taatttctacc-actttctcaatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaac 166  Q
    ||||||||||| | |||| ||||||||| ||| |||| ||||||||||||||||||||||| |||||||| ||| ||||||||||||||||| |||||    
T  29682389 taatttctacccattttcccaatctcacaaataaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaacccaagagaac 29682293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 156
Target Start/End: Original strand, 31340268 - 31340425
Alignment:
Q  6 aatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctaccacttt-ctcaatctcac 96  Q
    |||||||||||||||||| ||||||  |||||||| ||| ||||||||||||| |||||||||      ||  ||||||||||| ||| | |||||||||    
T  31340268 aatgagttcttacaaagagatacaaatgagttacatgaaattagcttcaacaa-gctcacaaagaacaacctcaatttctaccaattttcccaatctcac 31340366  T
Q  97 caatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaac 156  Q
    |||||||||  ||||||| |||||||||||| | |||||||| ||||| |||||||||||    
T  31340367 caatgaacaaaacactca-tgattttcactctcccaaggtgtttacaattgtttcccaac 31340425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 65 - 166
Target Start/End: Original strand, 5260456 - 5260557
Alignment:
Q  65 aaccctaatttctaccactttctc--aatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaata 162  Q
    ||||||||||||||||  ||| ||  |||||||||||||| || ||||||||||||||||||||||| |||||||| ||| ||||||||||||||||| |    
T  5260456 aaccctaatttctacccttttttcccaatctcaccaatgaccaagacactcaatgattttcactcac-caaggtgtttac-aatgtttcccaacccaaga 5260553  T
Q  163 gaac 166  Q
    ||||    
T  5260554 gaac 5260557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 70 - 169
Target Start/End: Original strand, 23392047 - 23392146
Alignment:
Q  70 taatttctac-cactttctcaatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaacct 168  Q
    |||||||||| || |||| ||| |||||||||||| | |||||| |||||||||||||||| |||||||| ||| ||||||||||||||||| |||||||    
T  23392047 taatttctactcattttcccaaactcaccaatgaaaaagacactaaatgattttcactcacccaaggtgtttac-aatgtttcccaacccaagagaacct 23392145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 93 - 169
Target Start/End: Original strand, 23410491 - 23410566
Alignment:
Q  93 tcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaacctc 169  Q
    |||| |||||||| |||||||||||||||||||||||||||||||| ||| ||||||| ||||||||| ||||||||    
T  23410491 tcactaatgaacaagacactcaatgattttcactcactcaaggtgtttac-aatgttttccaacccaagagaacctc 23410566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 43403806 - 43403969
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa---gagttacacgaatttagcttcaacaaagctcacaaac------cctaatttctacc-actttctcaa 90  Q
    ||||||||||||||||||||||| ||| ||   |||||||| ||| | ||||||||||| |||||||||       ||||||||||||| | |||| |||    
T  43403806 ctatcaatgagttcttacaaagagataaaacatgagttacaagaaatgagcttcaacaa-gctcacaaagaacaagcctaatttctacccattttcccaa 43403904  T
Q  91 tctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaac 156  Q
    ||||||||||||||| ||||||| ||||||||||||| | ||| |||| ||||| |||||||||||    
T  43403905 tctcaccaatgaacaagacactc-atgattttcactctcccaaagtgtttacaattgtttcccaac 43403969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 49199531 - 49199694
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaaga---gttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctacc-actttctcaa 90  Q
    ||||||||||||||||||||||| |||||| |   |||||| ||| ||||||||||||| |||||||||      || ||||||||||| | |||| |||    
T  49199531 ctatcaatgagttcttacaaagagatacaaaatgggttacaagaaattagcttcaacaa-gctcacaaagaacaaccttaatttctacccattttcccaa 49199629  T
Q  91 tctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaac 156  Q
    ||||||||| ||||| |||||||| |||||||||||| | ||| |||| ||||| |||||||||||    
T  49199630 tctcaccaacgaacaagacactca-tgattttcactctcccaaagtgtttacaattgtttcccaac 49199694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 65 - 160
Target Start/End: Original strand, 9636259 - 9636354
Alignment:
Q  65 aaccctaatttctaccactttctc--aatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaa 160  Q
    ||||||||||||||||  ||||||  |||||||||||||| || ||||||||||||||||||||||| |||||||| ||| ||| |||||||||||||    
T  9636259 aaccctaatttctacccttttctcccaatctcaccaatgaccaagacactcaatgattttcactcac-caaggtgtttac-aatatttcccaacccaa 9636354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 69 - 170
Target Start/End: Original strand, 23198076 - 23198175
Alignment:
Q  69 ctaatttctaccacttt-ctcaatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaacc 167  Q
    ||||||||||||| ||| | |||||||||||| ||||| ||||||||||||||||||||||| |||||||| ||| ||||||||||||||||| |||| |    
T  23198076 ctaatttctaccatttttcccaatctcaccaa-gaacaagacactcaatgattttcactcac-caaggtgtttac-aatgtttcccaacccaagagaaac 23198172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 69 - 170
Target Start/End: Original strand, 23200275 - 23200374
Alignment:
Q  69 ctaatttctaccacttt-ctcaatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaacc 167  Q
    ||||||||||||| ||| | |||||||||||| ||||| ||||||||||||||||||||||| |||||||| ||| ||||||||||||||||| |||| |    
T  23200275 ctaatttctaccatttttcccaatctcaccaa-gaacaagacactcaatgattttcactcac-caaggtgtttac-aatgtttcccaacccaagagaaac 23200371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 65 - 156
Target Start/End: Original strand, 6095732 - 6095823
Alignment:
Q  65 aaccctaatttctac-cactttctcaatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaac 156  Q
    ||||||||||||||| || |||| |||||||||||||||| | |||||||| |||||||||||| | |||||||| ||||| |||||||||||    
T  6095732 aaccctaatttctactcattttcccaatctcaccaatgaataagacactca-tgattttcactctcccaaggtgtttacaattgtttcccaac 6095823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 16499135 - 16498964
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa-----ccctaatttcta-ccactttctcaatc 92  Q
    ||||||||||||||||||||||| ||| ||  | || ||| ||| ||||||||||||| ||| |||||     |||||||||||| ||  |||| |||||    
T  16499135 ctatcaatgagttcttacaaagagatataaatgggtaacaagaaattagcttcaacaa-gcttacaaaaacaaccctaatttctatccgttttcccaatc 16499037  T
Q  93 tcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaac 166  Q
    |||| |||||||| ||||||||||||||||||||  | |||||||| ||| |||||||| ||||| || |||||    
T  16499036 tcacaaatgaacaagacactcaatgattttcactaccccaaggtgtttac-aatgtttctcaacctaagagaac 16498964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 29813169 - 29812936
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctaccactttctc-aat 91  Q
    |||| |||||||||||||||||| || |||  | |||||| ||| ||||||||||||| | |||||||      ||||||||||||||  ||| || |||    
T  29813169 ctataaatgagttcttacaaagagatgcaaatgggttacaagaaattagcttcaacaa-gttcacaaagaacaaccctaatttctacctatttttccaat 29813071  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaacctctcaaaagagcattaatcaaaga 191  Q
    ||||||||| |||| | | ||||||||||||||||||| ||| |||| ||| |||| |||||||||||| ||||             | |||||||||||    
T  29813070 ctcaccaattaacaagcccctcaatgattttcactcacccaatgtgtttac-aatgcttcccaacccaagagaa-------------ctttaatcaaaga 29812985  T
Q  192 ctctcaaccctaaaattaccttatttgatttcctaactttctctctctt 240  Q
    | |||||||||||| ||||||  |||||||||| || ||||||||||||    
T  29812984 ccctcaaccctaaagttacctcctttgatttcccaagtttctctctctt 29812936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 65 - 156
Target Start/End: Original strand, 41819656 - 41819748
Alignment:
Q  65 aaccctaatttctacc-actttctcaatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaac 156  Q
    |||||||||||||||| | |||| |||||||||||||||||| ||||||||   |||||||||| | |||||||| ||||| | |||||||||    
T  41819656 aaccctaatttctacccattttcccaatctcaccaatgaacaagacactcatgaattttcactctcccaaggtgtttacaattatttcccaac 41819748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 62 - 240
Target Start/End: Original strand, 51352241 - 51352423
Alignment:
Q  62 acaaaccctaatttctaccactttctcaatctcaccaatgaacatgacactca---atgattttcactcactcaaggtgtatacaaatgtttcccaaccc 158  Q
    ||||||||||| ||||| || ||||  |||||||||||| |||| ||||||||   |||||||| ||| |    |||||| ||||||||||| | |||||    
T  51352241 acaaaccctaacttctatcattttcctaatctcaccaataaacaagacactcaatgatgatttttacttatcttaggtgtttacaaatgttttctaaccc 51352340  T
Q  159 aatagaacctctcaaaagagcattaat-caaagactctcaaccctaaaattaccttatttgatttcctaactttctctctctt 240  Q
     | |||||||||||| ||| | || ||  ||| ||  ||||||||||||||||||  |||||||||| || ||||||||||||    
T  51352341 gagagaacctctcaagagaaccttgataaaaaaaccttcaaccctaaaattacctcctttgatttccgaagtttctctctctt 51352423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 156
Target Start/End: Complemental strand, 36018954 - 36018795
Alignment:
Q  6 aatgagttcttacaaagatatacaa---gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctacc-actttctcaatctca 95  Q
    |||||||||||||||||| ||||||   |||||||| ||| ||| ||||||||| |||||||||      |||||||||| ||| | |||| |||| |||    
T  36018954 aatgagttcttacaaagagatacaaaatgagttacaagaaattaacttcaacaa-gctcacaaagaacaaccctaatttcaacccattttcccaatttca 36018856  T
Q  96 ccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaac 156  Q
    |||||||||| | |||||  | |||||||||| | |||||||| ||||| |||||||||||    
T  36018855 ccaatgaacaagtcactcgttaattttcactctcccaaggtgtttacaattgtttcccaac 36018795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 68 - 129
Target Start/End: Original strand, 26386617 - 26386679
Alignment:
Q  68 cctaatttctacc-actttctcaatctcaccaatgaacatgacactcaatgattttcactcac 129  Q
    ||||||||||||| | |||| ||||||||| |||||||| |||||||||||||||||||||||    
T  26386617 cctaatttctacccattttcccaatctcacaaatgaacaagacactcaatgattttcactcac 26386679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 138
Target Start/End: Original strand, 26323210 - 26323281
Alignment:
Q  68 cctaatttctaccactttctcaatctca-ccaatgaacatgacactcaatgattttcactcactcaaggtgt 138  Q
    |||||||| ||||  ||||||||||||| || ||||||| |||||| |||||| ||||||||||||||||||    
T  26323210 cctaatttttacccttttctcaatctcatcccatgaacaagacacttaatgatgttcactcactcaaggtgt 26323281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 46173463 - 46173311
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctaccactttctcaatc 92  Q
    |||||||||| |||||||||||| ||||||  | |||||| ||| ||||||||||||| |||||||||      ||||||||||||||| |||           
T  46173463 ctatcaatgaattcttacaaagagatacaaatgggttacaagaaattagcttcaacaa-gctcacaaagaacaaccctaatttctaccaatttt------ 46173371  T
Q  93 tcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaa 155  Q
      ||||||||||| |||||||| |||||||||||| | |||||||| ||||| ||||||||||    
T  46173370 --accaatgaacaagacactca-tgattttcactctcccaaggtgtttacaattgtttcccaa 46173311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 182 - 240
Target Start/End: Complemental strand, 51398745 - 51398687
Alignment:
Q  182 taatcaaagactctcaaccctaaaattaccttatttgatttcctaactttctctctctt 240  Q
    |||||||||||||||||||||||| ||||||  |||||||||| || ||||| ||||||    
T  51398745 taatcaaagactctcaaccctaaagttacctcctttgatttcccaagtttctatctctt 51398687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 182 - 239
Target Start/End: Complemental strand, 7762197 - 7762140
Alignment:
Q  182 taatcaaagactctcaaccctaaaattaccttatttgatttcctaactttctctctct 239  Q
    ||||||||||| |||||||||||| ||||||  |||||||||| || |||||||||||    
T  7762197 taatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctctct 7762140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 246
Target Start/End: Original strand, 5236693 - 5236757
Alignment:
Q  182 taatcaaagactctcaaccctaaaattaccttatttgatttcctaactttctctctcttaaagcc 246  Q
    ||||||||||| |||||||||||| ||||||  || ||||||| || |||||||||||| |||||    
T  5236693 taatcaaagaccctcaaccctaaagttacctccttcgatttcccaagtttctctctcttcaagcc 5236757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 156
Target Start/End: Complemental strand, 47304286 - 47304195
Alignment:
Q  65 aaccctaatttctacc-actttctcaatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaac 156  Q
    |||| ||||||||||| | |||||||||||||| |||||||| ||||||| ||||||||||||| | || ||||| || || ||||| |||||    
T  47304286 aaccataatttctacccattttctcaatctcacaaatgaacaagacactc-atgattttcactctcccagggtgtttaaaattgttttccaac 47304195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 182 - 245
Target Start/End: Original strand, 9666705 - 9666768
Alignment:
Q  182 taatcaaagactctcaaccctaaaattaccttatttgatttcctaactttctctctcttaaagc 245  Q
    ||||||||||| |||||||||||| |||||| |||||||||||  | | |||||||||| ||||    
T  9666705 taatcaaagaccctcaaccctaaagttacctcatttgatttccctagtgtctctctcttgaagc 9666768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 182 - 245
Target Start/End: Original strand, 32744663 - 32744726
Alignment:
Q  182 taatcaaagactctcaaccctaaaattaccttatttgatttcctaactttctctctcttaaagc 245  Q
    ||||||||||| |||||||||||| ||||||  |||||||||| || ||| |||||||| ||||    
T  32744663 taatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttttctctcttgaagc 32744726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 240
Target Start/End: Complemental strand, 7764399 - 7764341
Alignment:
Q  182 taatcaaagactctcaaccctaaaattaccttatttgatttcctaactttctctctctt 240  Q
    ||||||||||| |||||| ||||| ||||||  |||||||||| || ||||||||||||    
T  7764399 taatcaaagaccctcaactctaaagttacctcctttgatttcccaagtttctctctctt 7764341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 224
Target Start/End: Original strand, 26386718 - 26386760
Alignment:
Q  182 taatcaaagactctcaaccctaaaattaccttatttgatttcc 224  Q
    |||||||||||||||||||||||| ||||||  ||||||||||    
T  26386718 taatcaaagactctcaaccctaaagttacctcctttgatttcc 26386760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 224
Target Start/End: Complemental strand, 29810799 - 29810757
Alignment:
Q  182 taatcaaagactctcaaccctaaaattaccttatttgatttcc 224  Q
    ||||||||||| |||||||||||||||||||  ||||||||||    
T  29810799 taatcaaagaccctcaaccctaaaattacctcctttgatttcc 29810757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 173
Target Start/End: Original strand, 1313994 - 1314047
Alignment:
Q  120 tttcactcactcaaggtgtatacaaatgtttcccaacccaatagaacctctcaa 173  Q
    |||||||||| |||||||| |||||||||||||||| |||| ||  ||||||||    
T  1313994 tttcactcacccaaggtgtttacaaatgtttcccaatccaagaggtcctctcaa 1314047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 99
Target Start/End: Complemental strand, 3617486 - 3617449
Alignment:
Q  62 acaaaccctaatttctaccactttctcaatctcaccaa 99  Q
    ||||||||||||||||||| ||||| ||||||||||||    
T  3617486 acaaaccctaatttctacccctttcccaatctcaccaa 3617449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 99
Target Start/End: Original strand, 4598656 - 4598693
Alignment:
Q  62 acaaaccctaatttctaccactttctcaatctcaccaa 99  Q
    ||||||||||||||||||| ||||| ||||||||||||    
T  4598656 acaaaccctaatttctacccctttcccaatctcaccaa 4598693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 99
Target Start/End: Original strand, 4600877 - 4600914
Alignment:
Q  62 acaaaccctaatttctaccactttctcaatctcaccaa 99  Q
    ||||||||||||||||||| ||||| ||||||||||||    
T  4600877 acaaaccctaatttctacccctttcccaatctcaccaa 4600914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 173
Target Start/End: Original strand, 8166635 - 8166700
Alignment:
Q  108 acactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaacctctcaa 173  Q
    |||||||||||||||||| ||| ||| |||| |||||||||||  |||| ||| ||||||| ||||    
T  8166635 acactcaatgattttcacccacccaatgtgtttacaaatgtttttcaactcaagagaacctttcaa 8166700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 99
Target Start/End: Complemental strand, 10056254 - 10056217
Alignment:
Q  62 acaaaccctaatttctaccactttctcaatctcaccaa 99  Q
    ||||||||||||||||||| ||||| ||||||||||||    
T  10056254 acaaaccctaatttctacccctttcccaatctcaccaa 10056217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 99
Target Start/End: Complemental strand, 10058476 - 10058439
Alignment:
Q  62 acaaaccctaatttctaccactttctcaatctcaccaa 99  Q
    ||||||||||||||||||| ||||| ||||||||||||    
T  10058476 acaaaccctaatttctacccctttcccaatctcaccaa 10058439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 99
Target Start/End: Complemental strand, 10060698 - 10060661
Alignment:
Q  62 acaaaccctaatttctaccactttctcaatctcaccaa 99  Q
    ||||||||||||||||||| ||||| ||||||||||||    
T  10060698 acaaaccctaatttctacccctttcccaatctcaccaa 10060661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 99
Target Start/End: Complemental strand, 10062920 - 10062883
Alignment:
Q  62 acaaaccctaatttctaccactttctcaatctcaccaa 99  Q
    ||||||||||||||||||| ||||| ||||||||||||    
T  10062920 acaaaccctaatttctacccctttcccaatctcaccaa 10062883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 99
Target Start/End: Complemental strand, 10065142 - 10065105
Alignment:
Q  62 acaaaccctaatttctaccactttctcaatctcaccaa 99  Q
    ||||||||||||||||||| ||||| ||||||||||||    
T  10065142 acaaaccctaatttctacccctttcccaatctcaccaa 10065105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 99
Target Start/End: Complemental strand, 10067364 - 10067327
Alignment:
Q  62 acaaaccctaatttctaccactttctcaatctcaccaa 99  Q
    ||||||||||||||||||| ||||| ||||||||||||    
T  10067364 acaaaccctaatttctacccctttcccaatctcaccaa 10067327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 99
Target Start/End: Complemental strand, 10209210 - 10209173
Alignment:
Q  62 acaaaccctaatttctaccactttctcaatctcaccaa 99  Q
    ||||||||||||||||||| ||||| ||||||||||||    
T  10209210 acaaaccctaatttctacccctttcccaatctcaccaa 10209173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 99
Target Start/End: Complemental strand, 10211430 - 10211393
Alignment:
Q  62 acaaaccctaatttctaccactttctcaatctcaccaa 99  Q
    ||||||||||||||||||| ||||| ||||||||||||    
T  10211430 acaaaccctaatttctacccctttcccaatctcaccaa 10211393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 99
Target Start/End: Complemental strand, 25637463 - 25637426
Alignment:
Q  62 acaaaccctaatttctaccactttctcaatctcaccaa 99  Q
    ||||||||||||||||||| ||||| ||||||||||||    
T  25637463 acaaaccctaatttctacccctttcccaatctcaccaa 25637426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 138
Target Start/End: Original strand, 35138844 - 35138913
Alignment:
Q  70 taatttctaccactttctcaatctcac-caatgaacatgacactcaatgattttcactcactcaaggtgt 138  Q
    |||||||||||  ||||||||||||   | ||||||| ||||||||||||||||||||| | ||||||||    
T  35138844 taatttctacccatttctcaatctctttccatgaacaagacactcaatgattttcactctcccaaggtgt 35138913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 166
Target Start/End: Original strand, 32744606 - 32744660
Alignment:
Q  110 actcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaac 166  Q
    |||||||||||||||||||| ||| |||| ||| ||||||||||||||||| |||||    
T  32744606 actcaatgattttcactcac-caatgtgtttac-aatgtttcccaacccaagagaac 32744660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 97; Significance: 1e-47; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 269
Target Start/End: Complemental strand, 36773668 - 36773392
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctacc-actttctcaat 91  Q
    ||||||| ||||||||||||||| ||||||  |||||||| ||| ||||||||||||| |||||||||      ||||||||| | || | |||| ||||    
T  36773668 ctatcaaagagttcttacaaagagatacaaatgagttacaagaaattagcttcaacaa-gctcacaaagaacaaccctaatttattcccattttcccaat 36773570  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaacctctcaaaagagcattaatcaaaga 191  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||| ||||| ||||||||||||||| |||||| ||||| ||| |  ||||||||||    
T  36773569 ctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaa-tgtttcccaacccaagagaacccctcaagagaaccctaatcaaaga 36773471  T
Q  192 ctctcaaccctaaaattaccttatttgatttcctaactttctctctcttaaagc-cttcaaaaaacatgaagaatgaag 269  Q
    | |||||||||||| ||||||  ||||||||||  | |||||||||||| |||| ||  | |||| |||||||||||||    
T  36773470 ccctcaaccctaaagttacctcctttgatttccctagtttctctctcttgaagctctatacaaaaaatgaagaatgaag 36773392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 1 - 276
Target Start/End: Complemental strand, 13121873 - 13121591
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaagagttacacgaatttagcttcaacaaagctcacaaa-------ccctaatttctaccactttctcaatct 93  Q
    |||||||||||||  |||||||| ||||||  |||||| ||| ||| ||||||||| |||||||||       ||||||||||||||| |||| || |||    
T  13121873 ctatcaatgagtttctacaaagagatacaaaggttacaagaaattatcttcaacaa-gctcacaaagaacaaaccctaatttctaccattttcccagtct 13121775  T
Q  94 caccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaacctctcaaaagagcattaatcaaagact 193  Q
    |||||||||||| ||||||||||||||||||||||| ||| |||| ||||||||||||||||||||| |||| ||||||| ||| |  || |||||||      
T  13121774 caccaatgaacaagacactcaatgattttcactcacccaatgtgtttacaaatgtttcccaacccaagagaagctctcaagagaaccctattcaaagatc 13121675  T
Q  194 ctcaaccctaaaattaccttatttgatttcctaactttctctctcttaaagcct-tcaaaaaacatgaagaatgaagcatttta 276  Q
     ||| ||||||||||||||  |||||||| |||| ||||| |||||| ||| ||  |  ||||||||||||||||||| |||||    
T  13121674 atcagccctaaaattacctcctttgattttctaagtttctttctcttgaagtctccctcaaaacatgaagaatgaagcctttta 13121591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 62 - 245
Target Start/End: Complemental strand, 11049587 - 11049405
Alignment:
Q  62 acaaaccctaatttctaccactttctcaatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaat 161  Q
    |||||||||||||| ||||| ||||  |||||||||||  |||| |||||||||||||||||||| || |||||||| ||||||||||||||||| |||     
T  11049587 acaaaccctaatttataccattttcctaatctcaccaaaaaacaagacactcaatgattttcacttacccaaggtgtttacaaatgtttcccaacacaag 11049488  T
Q  162 agaacctctcaaaagagcattaatcaaagactctcaaccctaaaattaccttatttgatttcctaactttctctctcttaaagc 245  Q
    |||| ||||||||||| |  |||||||||||  |||||||| |||||||||  |||||||||| || |||||||||||| ||||    
T  11049487 agaagctctcaaaagaaccctaatcaaagaccatcaaccct-aaattacctcctttgatttcccaagtttctctctcttgaagc 11049405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 7815335 - 7815554
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctc------acaaaccctaatttctaccactttctcaatc 92  Q
    |||| |||||||||||||||||| ||||||  |||||||| ||| |||||||||||||   ||      ||||||||||||||| |||  ||||||||||    
T  7815335 ctataaatgagttcttacaaagagatacaaaagagttacaagaaattagcttcaacaagcttctaaagaacaaaccctaatttcaacctttttctcaatc 7815434  T
Q  93 tcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaacctctcaaaagagcattaatcaaagac 192  Q
    ||||||||||||| ||||| ||||||||||||| |||  ||||||| |||||||||||| ||||||||||||||||||||| |      |||||||||||    
T  7815435 tcaccaatgaacaagacacgcaatgattttcacccacctaaggtgtttacaaatgtttctcaacccaatagaacctctcaagattatcctaatcaaagac 7815534  T
Q  193 tctcaaccctaaaattacct 212  Q
     |||||||||||| ||||||    
T  7815535 cctcaaccctaaagttacct 7815554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 38312346 - 38312174
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctacc-actttctcaat 91  Q
    ||||||||||| ||||||||||| ||||||  | |||||| ||| |||| |||||||| | |||||||      |||||||||||||| | |||| ||||    
T  38312346 ctatcaatgagatcttacaaagagatacaaatgggttacaagaaattagtttcaacaa-gttcacaaagaacaaccctaatttctacccattttcccaat 38312248  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaac 166  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||    
T  38312247 ctcaccaatgaacaagacactcaatgattttcactcacacaaggtgtatac-aatgtttcccaacccaagagaac 38312174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 2334480 - 2334651
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctacc-actttctcaat 91  Q
    ||||||||||||||||||||||| ||||||  |||||||  ||| ||||||||||||| | |||||||      |||| ||||||||| | |||| ||||    
T  2334480 ctatcaatgagttcttacaaagagatacaaaagagttactagaaattagcttcaacaa-gttcacaaagaacaacccttatttctacccattttcccaat 2334578  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaac 166  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||| ||| ||||||||||||||||| |||||    
T  2334579 ctcaccaatgaacaagacactcaatgattttcactcac-caaggtgtttac-aatgtttcccaacccaagagaac 2334651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 5723318 - 5723488
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaaga--gttacacgaatttagcttcaacaaagctcacaaac------cctaatttctaccactttctcaatc 92  Q
    ||||||||||||||||||||||| |||||| |  |||||| ||| |||||||  |||| | |||||||       |||||||||||||  ||||||||||    
T  5723318 ctatcaatgagttcttacaaagagatacaaaaaggttacaagaaattagctttgacaa-gttcacaaagaacaagcctaatttctacccttttctcaatc 5723416  T
Q  93 tcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaac 166  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||| ||| ||||||||||||||||| |||||    
T  5723417 tcaccaatgaacaagacactcaatgattttcactcac-caaggtgtttac-aatgtttcccaacccaagagaac 5723488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 65 - 166
Target Start/End: Complemental strand, 29867904 - 29867803
Alignment:
Q  65 aaccctaatttctacc-actttctcaatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatag 163  Q
    |||||||||||||||| | |||| |||||||||||||||||| ||||||||||||||||||||||| |||||||| ||| ||||||||||||||||| ||    
T  29867904 aaccctaatttctacccattttcccaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaacccaagag 29867806  T
Q  164 aac 166  Q
    |||    
T  29867805 aac 29867803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 65 - 166
Target Start/End: Original strand, 34139904 - 34140005
Alignment:
Q  65 aaccctaatttctacc-actttctcaatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatag 163  Q
    |||||||||||||||| | |||||||||||||| |||||||| ||||||||||||||||||||||| |||||||| ||| ||||||||||||||||| ||    
T  34139904 aaccctaatttctacccattttctcaatctcacaaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaacccaagag 34140002  T
Q  164 aac 166  Q
    |||    
T  34140003 aac 34140005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 17057431 - 17057603
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctaccactttctc-aat 91  Q
    ||||||||||||||||||||||| ||||||  ||||||||  || ||||||||||||| |||  ||||      ||||||||||||||  ||| || |||    
T  17057431 ctatcaatgagttcttacaaagagatacaaatgagttacaaaaaattagcttcaacaa-gcttgcaaagaacaaccctaatttctacccatttttccaat 17057529  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaac 166  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||| ||| ||| ||||||||||||| |||||    
T  17057530 ctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatatttcccaacccaagagaac 17057603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 17085414 - 17085586
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctaccactttctc-aat 91  Q
    ||||||||||||||||||||||| ||||||  ||||||||  || ||||||||||||| |||  ||||      ||||||||||||||  ||| || |||    
T  17085414 ctatcaatgagttcttacaaagagatacaaatgagttacaaaaaattagcttcaacaa-gcttgcaaagaacaaccctaatttctacccatttttccaat 17085512  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaac 166  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||| ||| ||| ||||||||||||| |||||    
T  17085513 ctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatatttcccaacccaagagaac 17085586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 42362458 - 42362286
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaac------cctaatttctacc-actttctcaat 91  Q
    ||||||||||||||||||||||  ||||||  | |||||| ||| ||||||| ||||| |||||||||       ||||||||||||| | |||| ||||    
T  42362458 ctatcaatgagttcttacaaagggatacaaatgggttacaagaaattagcttaaacaa-gctcacaaagaacaaacctaatttctacccattttcccaat 42362360  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaac 166  Q
    ||||| |||||||| ||||||||||||||||||||||| |||||||| ||| ||||||||||||||||| |||||    
T  42362359 ctcacaaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaacccaagagaac 42362286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 6 - 246
Target Start/End: Complemental strand, 11067406 - 11067159
Alignment:
Q  6 aatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctaccactttctc-aatctcac 96  Q
    |||||||||||||||||| ||||||  | |||||| ||| |||||||  |||| |||||||||      | ||||||||||||  ||| || ||| ||||    
T  11067406 aatgagttcttacaaagagatacaaatgggttacaagaaattagctttgacaa-gctcacaaagtacaacactaatttctacccatttttccaatttcac 11067308  T
Q  97 caatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaacctctcaaaagagcattaatcaaagactctc 196  Q
    ||||||| | ||||||||||||||||||||||| |||||||| ||| |||||||||||||| ||  ||| | ||||| ||| | ||||||||||||  ||    
T  11067307 caatgaataagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaaccgaagcgaagccctcaagagaaccttaatcaaagacaatc 11067209  T
Q  197 aaccctaaaattaccttatttgatttcctaactttctctctcttaaagcc 246  Q
    |||| |||| ||||||  ||||||||||  | |||||||||||| |||||    
T  11067208 aaccataaagttacctcctttgatttccctagtttctctctcttgaagcc 11067159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 33162512 - 33162745
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctacc-actttctcaat 91  Q
    ||||||||||||||||||| ||| ||||||  | |||||| ||| ||||||||||||| |||||||||      |||||||||||||| | ||||  |||    
T  33162512 ctatcaatgagttcttacagagagatacaaatgggttacaagaaattagcttcaacaa-gctcacaaagaacaaccctaatttctacccattttcctaat 33162610  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaacctctcaaaagagcattaatcaaaga 191  Q
     ||||||||||||| ||||||| |||||||||| |||| |||||||| ||| ||||||||||||| ||| ||||||              ||||||||||    
T  33162611 ttcaccaatgaacaagacactcgatgattttcaatcacccaaggtgtttac-aatgtttcccaactcaagagaacc-------------ctaatcaaaga 33162696  T
Q  192 ctctcaaccctaaaattaccttatttgatttcctaactttctctctctt 240  Q
    | |||||||||||||||||||  |||||||||| || ||||||||||||    
T  33162697 ccctcaaccctaaaattacctcctttgatttcccaagtttctctctctt 33162745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 36318071 - 36318237
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctaccactttctc-aat 91  Q
    ||||||||||||||||||||||| ||||||  | ||||||  || |||| |||||||| |||||||||      ||||||||||||||  ||| || |||    
T  36318071 ctatcaatgagttcttacaaagagatacaaatgggttacaataaattagtttcaacaa-gctcacaaagaacaaccctaatttctacccatttttccaat 36318169  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaa 160  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||| ||| ||| |||||||||||||    
T  36318170 ctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatatttcccaacccaa 36318237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 723806 - 723978
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaac------cctaatttctacc-actttctcaat 91  Q
    ||||||||||||||||||||||  ||||||  | |||||| ||| ||||||| ||||| |||||||||       ||||||||||||| | |||  ||||    
T  723806 ctatcaatgagttcttacaaagggatacaaatgggttacaagaaattagcttaaacaa-gctcacaaagaacaaacctaatttctacccagttttccaat 723904  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaac 166  Q
    ||||| |||||||| ||||||||||||||||||||||| |||||||| ||| ||||||||||||||||| |||||    
T  723905 ctcacaaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaacccaaaagaac 723978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 68 - 166
Target Start/End: Complemental strand, 11690533 - 11690435
Alignment:
Q  68 cctaatttctacc-actttctcaatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaac 166  Q
    ||||||||||||| | |||| ||||||||| |||||||| ||||||||||||||||||||||| |||||||| ||| ||||||||||||||||| |||||    
T  11690533 cctaatttctacccattttcccaatctcacaaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaacccaagagaac 11690435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 65 - 240
Target Start/End: Complemental strand, 39284920 - 39284758
Alignment:
Q  65 aaccctaatttctaccactttctc-aatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatag 163  Q
    ||||||||||||||||  ||| || ||||||||||||||||| || |||||||||||||||||||| |||||||| ||| ||||||||||||||||| ||    
T  39284920 aaccctaatttctacccatttttccaatctcaccaatgaacaagatactcaatgattttcactcacccaaggtgtttac-aatgtttcccaacccaagag 39284822  T
Q  164 aacctctcaaaagagcattaatcaaagactctcaaccctaaaattaccttatttgatttcctaactttctctctctt 240  Q
    || |||            ||||||||||| |||||||||||| ||||||  |||||||||| || ||||||||||||    
T  39284821 aa-ctc------------taatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctctctt 39284758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 1631794 - 1631956
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaac------cctaatttctaccactttctc-aat 91  Q
    ||||||||||||||||||||||| ||||||  | |||||| ||  ||||||||||||| |||||||||       |||||||||||||  ||| || |||    
T  1631794 ctatcaatgagttcttacaaagagatacaaatgggttacaagatattagcttcaacaa-gctcacaaagaacaatcctaatttctacccatttttccaat 1631892  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaac 156  Q
    |||||||||||||| |||||||| |||||||||||| |||||||||| ||||| |||||||||||    
T  1631893 ctcaccaatgaacaagacactca-tgattttcactctctcaaggtgtttacaattgtttcccaac 1631956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 65 - 166
Target Start/End: Original strand, 36205797 - 36205897
Alignment:
Q  65 aaccctaatttctaccacttt-ctcaatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatag 163  Q
    ||||||||||||||||| ||| | |||||||||||||||||| ||||||||||||||||||||||| |||||||| |||  |||||||||||||||| ||    
T  36205797 aaccctaatttctaccatttttcccaatctcaccaatgaacaagacactcaatgattttcactcac-caaggtgtttac-catgtttcccaacccaagag 36205894  T
Q  164 aac 166  Q
    |||    
T  36205895 aac 36205897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 36988138 - 36988375
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcaca------aaccctaatttctaccactttctc-aat 91  Q
    ||||||||||||||||||||||| ||||||  |||||||| ||| |||| ||  |||| |||||||      ||||||||||||||||  ||| || |||    
T  36988138 ctatcaatgagttcttacaaagagatacaaaagagttacaagaaattagttttgacaa-gctcacatagaacaaccctaatttctacccttttttccaat 36988236  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaacctctcaaaagagcattaatcaaaga 191  Q
    | |||||||||||| ||||||||||||||||||||||| |||||||| |||  |||||||||||||||| |||| |||            ||||||||||    
T  36988237 cccaccaatgaacaagacactcaatgattttcactcac-caaggtgtttac-tatgtttcccaacccaagagaa-ctc------------taatcaaaga 36988321  T
Q  192 ctctcaaccctaaaattaccttatttgatttcctaactttctctctcttaaagc 245  Q
    | |||||||||||| ||||||  |||||||||| || |||||||||||| ||||    
T  36988322 ccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttcaagc 36988375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 65 - 166
Target Start/End: Original strand, 4503265 - 4503366
Alignment:
Q  65 aaccctaatttctaccactttctc--aatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaata 162  Q
    ||||||||||||||||| ||| ||  |||||| |||||||||| ||||||||||||||||||||||| |||||||| ||| ||||||||||||||||| |    
T  4503265 aaccctaatttctaccattttttcccaatctctccaatgaacaagacactcaatgattttcactcac-caaggtgtttac-aatgtttcccaacccaaga 4503362  T
Q  163 gaac 166  Q
    ||||    
T  4503363 gaac 4503366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 65 - 166
Target Start/End: Complemental strand, 45099790 - 45099689
Alignment:
Q  65 aaccctaatttctaccactttctc--aatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaata 162  Q
    ||||||||||||||||  ||| ||  ||||||||||||||||| ||||||||||||||||||||||| |||||||| ||| ||||||||||||||||| |    
T  45099790 aaccctaatttctacccttttttcccaatctcaccaatgaacaagacactcaatgattttcactcac-caaggtgtttac-aatgtttcccaacccaaga 45099693  T
Q  163 gaac 166  Q
    ||||    
T  45099692 gaac 45099689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 68 - 166
Target Start/End: Original strand, 14633962 - 14634060
Alignment:
Q  68 cctaatttctacc-actttctcaatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaac 166  Q
    ||||||||||||| | |||  ||||||||| |||||||| ||||||||||||||||||||||| |||||||| ||| ||||||||||||||||| |||||    
T  14633962 cctaatttctacccattttaccaatctcacaaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaacccaaaagaac 14634060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 69 - 166
Target Start/End: Original strand, 11151728 - 11151825
Alignment:
Q  69 ctaatttctacc-actttctcaatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaac 166  Q
    |||||||||||| | |||| |||| ||||||||||||| || |||||||||||||||||||| |||||||| ||| ||||||||||||||||| |||||    
T  11151728 ctaatttctacccattttcccaatttcaccaatgaacaagagactcaatgattttcactcacccaaggtgtttac-aatgtttcccaacccaagagaac 11151825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 35446946 - 35447108
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctaccactttctc-aat 91  Q
    ||||||||||||||||||||||| ||||||  | |||||| ||| |||| |||||||| | |||||||      ||||||||||||||| |||  | |||    
T  35446946 ctatcaatgagttcttacaaagagatacaaatgggttacaagaaattagattcaacaa-gatcacaaagaacaaccctaatttctaccaattttaccaat 35447044  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaac 156  Q
    |||||||||||||| |||||||| |||||||||||| | |||||||| ||||| |||||||||||    
T  35447045 ctcaccaatgaacaagacactca-tgattttcactctcccaaggtgtttacaattgtttcccaac 35447108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 45727035 - 45726871
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaaga--gttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctacc-actttctcaat 91  Q
    ||||||||||||||||||||||| ||||||    |||||| ||| ||||||||||||| |||||||||      | |||||||||||| | |||| ||||    
T  45727035 ctatcaatgagttcttacaaagagatacaaataggttacaagaaattagcttcaacaa-gctcacaaagaacaactctaatttctacccattttcccaat 45726937  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaaccc 158  Q
    |||||||||||| | |||||||| |||||||||||| | |||||||| ||||| ||||||| |||||    
T  45726936 ctcaccaatgaataagacactca-tgattttcactctcccaaggtgtttacaattgtttcctaaccc 45726871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 89 - 156
Target Start/End: Complemental strand, 17450601 - 17450534
Alignment:
Q  89 aatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaac 156  Q
    ||||||||||||||||| ||||||||||||||||||||||| |||||||| | ||||||||| |||||    
T  17450601 aatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttgcaaatgtttgccaac 17450534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 17490210 - 17490336
Alignment:
Q  1 ctatcaatgagttcttacaaaga--tatacaagagttacacgaatttagcttcaacaaagctcacaaaccct--aatttctaccactttctcaatctcac 96  Q
    |||||||||||||||||||||||  || | |||||||||| ||| ||||||||||| |||||||||||   |  ||||||||||| |||| ||||||||     
T  17490210 ctatcaatgagttcttacaaagagttacaaaagagttacaagaaattagcttcaac-aagctcacaaagaataaaatttctaccattttc-caatctcaa 17490307  T
Q  97 caatgaacatgacactcaatgattttcac 125  Q
    ||||||||| |||| ||||||||||||||    
T  17490308 caatgaacaagacattcaatgattttcac 17490336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 83 - 160
Target Start/End: Original strand, 5700274 - 5700351
Alignment:
Q  83 tttctcaatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaa 160  Q
    |||||||||||| |||||||||| ||||||||||| |||||| |||| ||| |||| |||||||||||| ||||||||    
T  5700274 tttctcaatctctccaatgaacaagacactcaatgtttttcattcacccaaagtgtttacaaatgtttctcaacccaa 5700351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 6595068 - 6595306
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaagag--ttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctaccactttctc--aa 90  Q
    ||||||| ||||||||||||||| || ||| ||  ||||| ||| ||||||||||||| | |||||||      ||||||||||||||| ||| ||  ||    
T  6595068 ctatcaacgagttcttacaaagagattcaaaagggttacaagaaattagcttcaacaa-gttcacaaagaacaaccctaatttctaccattttttcctaa 6595166  T
Q  91 tctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaacctctcaaaagagcattaatcaaag 190  Q
    ||||||||||||||| ||||| |||||||| |||||| | ||| |||| ||||| | ||||||| ||||| |||||   ||          |||||||||    
T  6595167 tctcaccaatgaacaagacacccaatgattctcactctc-caaagtgtttacaatt-tttcccagcccaagagaac---tc----------taatcaaag 6595251  T
Q  191 actctcaaccctaaaattaccttatttgatttcctaactttctctctcttaaagc 245  Q
    || |||||||||||| |||||| |||||||||||||| |||||||||||| ||||    
T  6595252 accctcaaccctaaagttacctcatttgatttcctaagtttctctctcttcaagc 6595306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 68 - 159
Target Start/End: Complemental strand, 24885693 - 24885602
Alignment:
Q  68 cctaatttctac-cactttctcaatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaaccca 159  Q
    |||||||||||| || |||| |||| | || |||||||| ||||||||||||||||||||||| |||||||| ||| ||||||||||||||||    
T  24885693 cctaatttctactcattttcccaattttacaaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaaccca 24885602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 2 - 156
Target Start/End: Original strand, 42288173 - 42288334
Alignment:
Q  2 tatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctacc-actttctcaatc 92  Q
    |||||||||| ||||||||||| ||||||  | ||||||  || ||||||||||||| |||||||||      || ||||||||||| | |||| |||||    
T  42288173 tatcaatgagctcttacaaagaaatacaaatgggttacaataaattagcttcaacaa-gctcacaaagaacaaccttaatttctacccattttcccaatc 42288271  T
Q  93 tcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaac 156  Q
    ||||||||| ||| |||||||  |||||||||||| | |||||||| ||||| |||||||||||    
T  42288272 tcaccaatgcacaagacactcg-tgattttcactctcccaaggtgtttacaattgtttcccaac 42288334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 65 - 170
Target Start/End: Original strand, 4484464 - 4484568
Alignment:
Q  65 aaccctaatttctaccactttctc--aatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaata 162  Q
    ||||||||||||||||  ||||||  ||| ||||||| ||||| ||||||||||||||| ||||||| |||||||| ||| ||||||||||||||||| |    
T  4484464 aaccctaatttctacccttttctcccaatttcaccaa-gaacaagacactcaatgatttacactcac-caaggtgtttac-aatgtttcccaacccaaga 4484560  T
Q  163 gaacctct 170  Q
    ||| ||||    
T  4484561 gaagctct 4484568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 88 - 166
Target Start/End: Original strand, 12123741 - 12123819
Alignment:
Q  88 caatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaac 166  Q
    ||||||| | |||||||| ||||||| ||||||||||||||  |||||||| || ||||||||||||||| || |||||    
T  12123741 caatctctcaaatgaacaagacactcgatgattttcactcatccaaggtgtttataaatgtttcccaacctaagagaac 12123819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 65 - 160
Target Start/End: Complemental strand, 30833380 - 30833286
Alignment:
Q  65 aaccctaatttctaccactttctc--aatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaa 160  Q
    ||||||||||||||||  ||||||  ||||||||||| ||||| ||||||||||||||| ||||||| ||| |||| ||| |||||||||||||||||    
T  30833380 aaccctaatttctacccttttctcccaatctcaccaa-gaacaagacactcaatgatttacactcac-caaagtgtttac-aatgtttcccaacccaa 30833286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 166
Target Start/End: Original strand, 14202584 - 14202641
Alignment:
Q  108 acactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaac 166  Q
    ||||||||| |||||||||||| |||||||| ||| ||||||||||||||||| |||||    
T  14202584 acactcaataattttcactcacccaaggtgtttac-aatgtttcccaacccaagagaac 14202641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 88 - 156
Target Start/End: Complemental strand, 24398066 - 24397997
Alignment:
Q  88 caatctcaccaatgaacatgacactcaatgattttcactc-actcaaggtgtatacaaatgtttcccaac 156  Q
    |||||||||||||||||| |||||||| ||||||||||||  |  ||||||| ||||| |||||||||||    
T  24398066 caatctcaccaatgaacaagacactcattgattttcactcttccaaaggtgtttacaattgtttcccaac 24397997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 182 - 245
Target Start/End: Original strand, 2334654 - 2334717
Alignment:
Q  182 taatcaaagactctcaaccctaaaattaccttatttgatttcctaactttctctctcttaaagc 245  Q
    |||||||| || |||||||||||| ||||||  |||||||||| || |||||||||||| ||||    
T  2334654 taatcaaataccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttcaagc 2334717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 182 - 245
Target Start/End: Complemental strand, 38312171 - 38312108
Alignment:
Q  182 taatcaaagactctcaaccctaaaattaccttatttgatttcctaactttctctctcttaaagc 245  Q
    ||||||||||  |||||||||||| ||||||  |||||||||| || |||||||||||| ||||    
T  38312171 taatcaaagaacctcaaccctaaagttacctcctttgatttcccaaatttctctctcttcaagc 38312108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 240
Target Start/End: Original strand, 36318246 - 36318304
Alignment:
Q  182 taatcaaagactctcaaccctaaaattaccttatttgatttcctaactttctctctctt 240  Q
    |||||||||||  ||||||||||| ||||||  |||||||||| || ||||||||||||    
T  36318246 taatcaaagacattcaaccctaaagttacctcctttgatttcccaagtttctctctctt 36318304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 300
Target Start/End: Complemental strand, 4561065 - 4560906
Alignment:
Q  140 tacaaatgtttcccaacccaatagaacctctcaaaagagcattaatcaaagactctcaaccctaaaattaccttatttgatttcctaactttctctctct 239  Q
    ||||||| ||||||| ||||| ||||||| |||| ||| | || | ||||||| |||||| ||||| ||| ||  | ||||||||||| ||| |||||||    
T  4561065 tacaaatatttccca-cccaaaagaacctatcaagagaac-ttcaccaaagacactcaactctaaagttatctcctctgatttcctaagtttttctctct 4560968  T
Q  240 taaagcc-ttcaaaaaacatgaagaatgaagcattttataatgtacaagatccgagaaaatc 300  Q
    | |||   ||| |||||||||||||||||||  || || |||| |||||  |||||||||||    
T  4560967 tgaagttattctaaaaacatgaagaatgaagtcttatacaatgcacaagtcccgagaaaatc 4560906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 99
Target Start/End: Original strand, 12647518 - 12647555
Alignment:
Q  62 acaaaccctaatttctaccactttctcaatctcaccaa 99  Q
    ||||||||||||||||||| ||||| ||||||||||||    
T  12647518 acaaaccctaatttctacccctttcccaatctcaccaa 12647555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 99
Target Start/End: Original strand, 13656163 - 13656200
Alignment:
Q  62 acaaaccctaatttctaccactttctcaatctcaccaa 99  Q
    ||||||||||||||||||| ||||| ||||||||||||    
T  13656163 acaaaccctaatttctacccctttcccaatctcaccaa 13656200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 172
Target Start/End: Complemental strand, 28671889 - 28671857
Alignment:
Q  140 tacaaatgtttcccaacccaatagaacctctca 172  Q
    ||||||||||||||||||||| |||||||||||    
T  28671889 tacaaatgtttcccaacccaaaagaacctctca 28671857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 94; Significance: 7e-46; HSPs: 66)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 1 - 270
Target Start/End: Original strand, 28265616 - 28265892
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaa------accctaatttctacc-actttctcaat 91  Q
    ||||||| ||||||||||||||| ||||||  | |||||| ||| ||||||||||||| ||||||||      ||||||||||||||| | |||| ||||    
T  28265616 ctatcaaagagttcttacaaagagatacaaatgggttacaagaaattagcttcaacaa-gctcacaatgaacaaccctaatttctacctattttcccaat 28265714  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaacctctcaaaagagcattaatcaaaga 191  Q
    ||| |||||||||| ||||||||||||||||||||||| |||||||| ||| |||||||||||||| || |||||| ||||| ||| |  ||||||||||    
T  28265715 ctcgccaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaacctaagagaacccctcaagagaac-ctaatcaaaga 28265812  T
Q  192 ctctcaaccctaaaattaccttatttgatttcctaactttctctctcttaaagc-cttcaaaaaacatgaagaatgaagc 270  Q
    | |||||||||||| ||||||  ||||||||||  | |||||||||||| |||| ||||  |||| ||||||||||||||    
T  28265813 ccctcaaccctaaagttacctcctttgatttccctagtttctctctcttgaagctcttcccaaaaaatgaagaatgaagc 28265892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 270
Target Start/End: Original strand, 50167237 - 50167514
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctaccacttt-ctcaat 91  Q
    ||||||||||||| ||||||||| ||||||  | |||||| ||| |||||||  |||| |||||||||      ||||||||||||| | ||| | ||||    
T  50167237 ctatcaatgagtttttacaaagagatacaaatgggttacaagaaattagctttgacaa-gctcacaaataacaaccctaatttctactaattttcccaat 50167335  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaacctctcaaaagagcattaatcaaaga 191  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||| ||| ||||||||||||||||| |||||| ||||| ||| |  ||||||||||    
T  50167336 ctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaacccaagagaacccctcaagagaaccctaatcaaaga 50167434  T
Q  192 ctctcaaccctaaaattaccttatttgatttcctaactttctctctcttaaagc-cttcaaaaaacatgaagaatgaagc 270  Q
    | |||||||||||| ||||||  ||||||||||  | |||||||||||| |||| |||   |||| ||||||||||||||    
T  50167435 ccctcaaccctaaagttacctcctttgatttccctagtttctctctcttgaagctcttaccaaaaaatgaagaatgaagc 50167514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 37503619 - 37503788
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaagagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctacc-actttctcaatct 93  Q
    ||||||||||||||||||||||| ||||||| |||||| ||| ||||||||||||| | |||||||      ||||||||| |||| | |||| ||||||    
T  37503619 ctatcaatgagttcttacaaagagatacaag-gttacaagaaattagcttcaacaa-gttcacaaagaacaaccctaatttttacccattttcccaatct 37503716  T
Q  94 caccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaac 166  Q
    |||||||||||| ||||||||||||||||||||||| |||||||| ||| ||| ||| |||||||||||||||    
T  37503717 caccaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatattttccaacccaatagaac 37503788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 196970 - 197142
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctaccacttt-ctcaat 91  Q
    ||||||||||||||||||||||  ||||||  |||||||| ||| ||| ||| ||||| |||||||||      ||||||||||||||| ||| ||||||    
T  196970 ctatcaatgagttcttacaaagggatacaaatgagttacaagaaattaacttaaacaa-gctcacaaagaacaaccctaatttctaccaattttctcaat 197068  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaac 166  Q
    ||||| |||||||| ||||||||||||||||||||||| |||||||| ||| ||||||||||||||||| |||||    
T  197069 ctcacaaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaacccaagagaac 197142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 1833628 - 1833456
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctacc-actttctcaat 91  Q
    ||||||||||||||||||||||| ||||||  |||||||| |||||||||||||| | |  |||||||      |||||||||||||| | |||| ||||    
T  1833628 ctatcaatgagttcttacaaagagatacaaatgagttacaagaatttagcttcaatagat-tcacaaagaacaaccctaatttctacccattttcccaat 1833530  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaac 166  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||| ||| |||||||||||| |||| |||||    
T  1833529 ctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaatccaagagaac 1833456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 49918456 - 49918283
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctacc-actttctcaat 91  Q
    ||||||||||||||||||||||| ||||||  | |||||| ||| ||||||||||||| | |||||||      |||||||||||||| | |||||||||    
T  49918456 ctatcaatgagttcttacaaagagatacaaatgggttacaagaaattagcttcaacaa-gttcacaaagaacaaccctaatttctacccattttctcaat 49918358  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaac 166  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||| |   |||||||||||| |||| |||||    
T  49918357 ctcaccaatgaacaagacactcaatgattttcactcacccaaggtgttttataatgtttcccaatccaagagaac 49918283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 2 - 169
Target Start/End: Original strand, 4552700 - 4552874
Alignment:
Q  2 tatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaac------cctaatttctacc-actttctcaatc 92  Q
    |||||||||||||||||||||  ||||||  | |||||| ||| ||||||||||||| |||||||||       ||||||||||||| | ||||||||||    
T  4552700 tatcaatgagttcttacaaagggatacaaaggggttacaagaaattagcttcaacaa-gctcacaaaggacaaacctaatttctacccattttctcaatc 4552798  T
Q  93 tcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaacctc 169  Q
    ||||||||||||| ||||||||||||||||| ||||| |||||||| ||| |||||||| |||||||| ||||||||    
T  4552799 tcaccaatgaacaagacactcaatgattttccctcacccaaggtgtttac-aatgtttctcaacccaagagaacctc 4552874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 31659344 - 31659106
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctaccactttctc-aat 91  Q
    |||||||| |||||||||||||| ||||||  | |||||| ||| ||||||||||||| |||||||||      ||||||||||||||  ||| || |||    
T  31659344 ctatcaataagttcttacaaagagatacaaatgggttacaagaaattagcttcaacaa-gctcacaaagaacagccctaatttctacccatttttccaat 31659246  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaacctctcaaaagagcattaatcaaaga 191  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||| ||| ||||||||| ||||||| |||| |||            ||||||||||    
T  31659245 ctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttccgaacccaagagaa-ctc------------taatcaaaga 31659160  T
Q  192 ctctcaaccctaaaattaccttatttgatttcctaactttctctctcttaaagc 245  Q
    | |||||||||||| ||||||  |||||||||| || |||||||||||| ||||    
T  31659159 ccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttcaagc 31659106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 3156971 - 3156739
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctacc-actttctcaat 91  Q
    ||||||||||||||||||||||| ||||||  | |||||| ||| ||||||||||||| | |||||||      |||||||||||||| | |||||||||    
T  3156971 ctatcaatgagttcttacaaagagatacaaatgggttacaagaaattagcttcaacaa-gttcacaaagaacaaccctaatttctacccattttctcaat 3156873  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaacctctcaaaagagcattaatcaaaga 191  Q
    |||||||||||||| ||||||||||||||||||||||| || ||||| ||| ||||||||| ||||||| |||| |||            ||||||||||    
T  3156872 ctcaccaatgaacaagacactcaatgattttcactcac-cagggtgtttac-aatgtttccaaacccaagagaa-ctc------------taatcaaaga 3156788  T
Q  192 ctctcaaccctaaaattaccttatttgatttcctaactttctctctctt 240  Q
    | |||||||||||| ||||||  |||||||||| || ||||||||||||    
T  3156787 ccctcaaccctaaagttacctcctttgatttcccaagtttctctctctt 3156739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 12 - 166
Target Start/End: Complemental strand, 10925318 - 10925157
Alignment:
Q  12 ttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttcta-ccactttctcaatctcaccaatga 102  Q
    |||||||||||| ||||||  |||||||| ||| ||||||||||||| |||||||||      || ||||||||| ||| ||| ||||||||||||||||    
T  10925318 ttcttacaaagagatacaaatgagttacaagaaattagcttcaacaa-gctcacaaagaacaaccataatttctatccattttttcaatctcaccaatga 10925220  T
Q  103 acatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaac 166  Q
    ||| ||||||||||||||||||||||| |||||||| ||| ||||||||||||||||| |||||    
T  10925219 acaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaacccaagagaac 10925157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 3847183 - 3847355
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctacc-actttctcaat 91  Q
    ||||||||||||||||||||||  ||||||  | ||||||  |||||||||| |||||| ||||||||      |||||||||||||| | |||| ||||    
T  3847183 ctatcaatgagttcttacaaagggatacaaatgggttacaaaaatttagcttaaacaaa-ctcacaaagaacaaccctaatttctacccattttcccaat 3847281  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaac 166  Q
    ||||| |||||||| ||||||||||||||||||||||| |||||||| ||| ||||||||||||||||| |||||    
T  3847282 ctcacaaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaacccaagagaac 3847355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 13138038 - 13138209
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaac-----cctaatttctaccactttctcaatct 93  Q
    ||||||||| ||||||||||||| || |||  | |||||| ||| ||||||||||||| |||||||||      ||||||||||| |  ||| |||||||    
T  13138038 ctatcaatgtgttcttacaaagagatgcaaatgggttacaagaaattagcttcaacaa-gctcacaaagaacgacctaatttctatccatttttcaatct 13138136  T
Q  94 caccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaacc 167  Q
    |||||||||||| ||||||||||||||||||||||| |||||||| ||| ||||||||||| ||||| ||||||    
T  13138137 caccaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaccccaagagaacc 13138209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 28223483 - 28223721
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctacc-actttctcaat 91  Q
    ||||||||||||||||||||||| ||||||  | |||||| ||| ||||||||||||| | ||| |||      || ||||||||||| | |||| ||||    
T  28223483 ctatcaatgagttcttacaaagagatacaaatgggttacaagaaattagcttcaacaa-gttcagaaagatcaaccataatttctacccattttcccaat 28223581  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaacctctcaaaagagcattaatcaaaga 191  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||| | | ||||||||||||||||| |||| |||            ||||||||||    
T  28223582 ctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtcttc-aatgtttcccaacccaagagaa-ctc------------taatcaaaga 28223667  T
Q  192 ctctcaaccctaaaattaccttatttgatttcctaactttctctctcttaaagc 245  Q
    | |||||||||||| ||||||  |||||||||| || |||||||||||| ||||    
T  28223668 ccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttcaagc 28223721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 44455266 - 44455100
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctacc-actttctcaat 91  Q
    ||||||||||||||||||||| | ||||||  |||||||| ||| |||| |||||||| | |||||||      |||||||||||||| | |||| ||||    
T  44455266 ctatcaatgagttcttacaaaaagatacaaatgagttacaagaaattagtttcaacaa-gttcacaaagaacaaccctaatttctacccattttcccaat 44455168  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaa 160  Q
    |||||||||||||| ||||||||||| ||||||||||| |||||||| ||| |||||||||||||||||    
T  44455167 ctcaccaatgaacaagacactcaatggttttcactcacccaaggtgtttac-aatgtttcccaacccaa 44455100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 834229 - 834401
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttcta-ccactttctcaat 91  Q
    ||||||||||||||||||||||  ||||||  | |||||| ||| ||||||| ||||| |||||||||      |||||||||||| ||| |||| ||||    
T  834229 ctatcaatgagttcttacaaagggatacaaatgggttacaagaaattagcttaaacaa-gctcacaaagaacaaccctaatttctatccattttcccaat 834327  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaac 166  Q
    ||||| |||||||| ||||||||||||||||||| ||| |||||||| ||| ||||||||||||||||| |||||    
T  834328 ctcacaaatgaacaagacactcaatgattttcacgcacccaaggtgtttac-aatgtttcccaacccaagagaac 834401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 19754601 - 19754438
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaaga--gttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctaccacttt--ctcaa 90  Q
    ||||||||||||||||||||||| ||||||    |||||| ||| ||||||||||||| |||||||||      ||||||||||||||  |||  |||||    
T  19754601 ctatcaatgagttcttacaaagagatacaaatcggttacaagaaattagcttcaacaa-gctcacaaagaacaaccctaatttctacccatttttctcaa 19754503  T
Q  91 tctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaac 156  Q
    ||||||||||||||| |||||||| |||||||||||| |||||||||| ||| |||||||||||||    
T  19754502 tctcaccaatgaacaagacactca-tgattttcactctctcaaggtgtttacgaatgtttcccaac 19754438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 37168404 - 37168241
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaaga---gttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctacc-actttctcaa 90  Q
    ||||||||||||||||||||||| |||||| |   |||||| ||| ||||||| ||||| |||||||||      |||||||||||||| | |||| |||    
T  37168404 ctatcaatgagttcttacaaagagatacaaaatgggttacaagaaattagcttaaacaa-gctcacaaagaacaaccctaatttctacccattttcccaa 37168306  T
Q  91 tctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaac 156  Q
    ||||||||||||||| |||||||| |||||||||||| |||||||||| ||||| |||||||||||    
T  37168305 tctcaccaatgaacaagacactca-tgattttcactctctcaaggtgtttacaattgtttcccaac 37168241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 11348804 - 11348642
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctaccacttt-ctcaat 91  Q
    ||||||||||||||||| ||||| ||||||  | |||||| ||| ||||||||||||| |||||||||      ||||||||||||||| ||| | ||||    
T  11348804 ctatcaatgagttcttagaaagagatacaaatgggttacaagaaattagcttcaacaa-gctcacaaagaacaaccctaatttctaccaattttcccaat 11348706  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaac 156  Q
    |||||||||||||| |||||||| |||||||||||| | |||||||| ||||| |||||||||||    
T  11348705 ctcaccaatgaacaagacactca-tgattttcactctcccaaggtgtttacaattgtttcccaac 11348642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 28220288 - 28220526
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctacc-actttctcaat 91  Q
    ||||||||||||||||||||||| ||||||  | |||||| ||| ||||||||||||| | |||||||      |||||||||||||| | ||||  |||    
T  28220288 ctatcaatgagttcttacaaagagatacaaatgggttacaagaaattagcttcaacaa-gttcacaaagaacaaccctaatttctacccattttccgaat 28220386  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaacctctcaaaagagcattaatcaaaga 191  Q
    |||||||||||| | ||||||||||||||||||||||| |||||||| | | |||| |||||||||||| |||| |||            ||||||||||    
T  28220387 ctcaccaatgaataagacactcaatgattttcactcacccaaggtgttttc-aatgcttcccaacccaagagaa-ctc------------taatcaaaga 28220472  T
Q  192 ctctcaaccctaaaattaccttatttgatttcctaactttctctctcttaaagc 245  Q
    | |||||||||||| ||||||  |||||||||| || |||||||||||| ||||    
T  28220473 ccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttcaagc 28220526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 42298037 - 42298199
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctaccacttt-ctcaat 91  Q
    ||||||||||||||||||||||| ||||||  |||||||| ||| ||||||||||||| |||||||||      ||||||||||||||| ||| | ||||    
T  42298037 ctatcaatgagttcttacaaagagatacaaatgagttacaagaaattagcttcaacaa-gctcacaaaaaacaaccctaatttctaccaattttcccaat 42298135  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaac 156  Q
    |||||||||||||| ||||||| |||||||| |||| | |||||||| ||||| |||||| ||||    
T  42298136 ctcaccaatgaacaagacactc-atgatttttactctcccaaggtgtttacaattgtttcacaac 42298199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 50169272 - 50169438
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctaccactttctc-aat 91  Q
    |||||||||||| |||||||||| ||||||  |||||||| ||| |||||||  |||| |||||||||      ||||||||||||||  ||| || |||    
T  50169272 ctatcaatgagtacttacaaagagatacaaatgagttacaagaaattagctttgacaa-gctcacaaagaacaaccctaatttctacccatttttccaat 50169370  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaa 160  Q
    |||||||||||||| ||||||||||||||||||||||| |||||| | ||| |||||||||||||||||    
T  50169371 ctcaccaatgaacaagacactcaatgattttcactcacccaaggtatttac-aatgtttcccaacccaa 50169438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 13547151 - 13547312
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctacc-actttctcaat 91  Q
    ||||||||||||||||||||||| ||||||  | |||||| |||  |||||||||||| |||||||||      |||||||||||||| | |||| ||||    
T  13547151 ctatcaatgagttcttacaaagagatacaaatgggttacaagaaaatagcttcaacaa-gctcacaaagaacaaccctaatttctacccattttcccaat 13547249  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaa 155  Q
    |||||||||||||| |||||||| |||||||||||| | |||||||| ||||| ||||||||||    
T  13547250 ctcaccaatgaacaagacactca-tgattttcactctcccaaggtgtttacaattgtttcccaa 13547312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 62 - 165
Target Start/End: Original strand, 928107 - 928211
Alignment:
Q  62 acaaaccctaatttctaccactttctc-aatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaa 160  Q
    ||||||||||||||||| || ||| || ||| ||||||| ||||| |||||||| |||||||||||||| |||||||| |||||||||||||||||||||    
T  928107 acaaaccctaatttctatcattttttccaatatcaccaaagaacaagacactcattgattttcactcacccaaggtgtttacaaatgtttcccaacccaa 928206  T
Q  161 tagaa 165  Q
     ||||    
T  928207 gagaa 928211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 3189436 - 3189204
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctaccactttctc--aa 90  Q
    ||||||||||||||||||||| | ||||||  |||||||| ||| ||||||||||||| | |||||||      ||||||||| |||| |||| ||  ||    
T  3189436 ctatcaatgagttcttacaaaaagatacaaaagagttacaggaaattagcttcaacaa-gttcacaaagaacaaccctaatttatacc-ctttttccaaa 3189339  T
Q  91 tctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaacctctcaaaagagcattaatcaaag 190  Q
    ||||||||||||||| |||||||| |||||||||||||| |||||||| ||| ||||||||||||||||| ||||             | ||||||||||    
T  3189338 tctcaccaatgaacaagacactcagtgattttcactcac-caaggtgtttac-aatgtttcccaacccaagagaa-------------ctttaatcaaag 3189254  T
Q  191 actctcaaccctaaaattaccttatttgatttcctaactttctctctctt 240  Q
    || |||||||||||| ||||||  |||||||||| || ||||||||||||    
T  3189253 accctcaaccctaaagttacctcctttgatttcccaagtttctctctctt 3189204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 3198253 - 3198021
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctaccactttctc--aa 90  Q
    ||||||||||||||||||||| | ||||||  |||||||| ||| ||||||||||||| | |||||||      ||||||||| |||| |||| ||  ||    
T  3198253 ctatcaatgagttcttacaaaaagatacaaaagagttacaggaaattagcttcaacaa-gttcacaaagaacaaccctaatttatacc-ctttttccaaa 3198156  T
Q  91 tctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaacctctcaaaagagcattaatcaaag 190  Q
    ||||||||||||||| |||||||| |||||||||||||| |||||||| ||| ||||||||||||||||| ||||             | ||||||||||    
T  3198155 tctcaccaatgaacaagacactcagtgattttcactcac-caaggtgtttac-aatgtttcccaacccaagagaa-------------ctttaatcaaag 3198071  T
Q  191 actctcaaccctaaaattaccttatttgatttcctaactttctctctctt 240  Q
    || |||||||||||| ||||||  |||||||||| || ||||||||||||    
T  3198070 accctcaaccctaaagttacctcctttgatttcccaagtttctctctctt 3198021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 3207092 - 3206860
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctaccactttctc--aa 90  Q
    ||||||||||||||||||||| | ||||||  |||||||| ||| ||||||||||||| | |||||||      ||||||||| |||| |||| ||  ||    
T  3207092 ctatcaatgagttcttacaaaaagatacaaaagagttacaggaaattagcttcaacaa-gttcacaaagaacaaccctaatttatacc-ctttttccaaa 3206995  T
Q  91 tctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaacctctcaaaagagcattaatcaaag 190  Q
    ||||||||||||||| |||||||| |||||||||||||| |||||||| ||| ||||||||||||||||| ||||             | ||||||||||    
T  3206994 tctcaccaatgaacaagacactcagtgattttcactcac-caaggtgtttac-aatgtttcccaacccaagagaa-------------ctttaatcaaag 3206910  T
Q  191 actctcaaccctaaaattaccttatttgatttcctaactttctctctctt 240  Q
    || |||||||||||| ||||||  |||||||||| || ||||||||||||    
T  3206909 accctcaaccctaaagttacctcctttgatttcccaagtttctctctctt 3206860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 193717 - 193555
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctacc-actttctcaat 91  Q
    ||||||||||||| ||||||||| ||||||  |||||||| ||| ||||||||||||| ||| | |||      |||||||||||||| | |||||||||    
T  193717 ctatcaatgagttattacaaagagatacaaatgagttacaagaaattagcttcaacaa-gctaataaagaacaaccctaatttctacccattttctcaat 193619  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaac 156  Q
    |||||||||||||| ||||||| ||||||||||| | | |||||||| ||||| |||||||||||    
T  193618 ctcaccaatgaacaagacactc-atgattttcaccctcccaaggtgtttacaattgtttcccaac 193555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 13549062 - 13549223
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctacc-actttctcaat 91  Q
    ||||||||||||||||||||||| ||||||  | |||||| ||| |||| || ||||| |||||||||      |||||||||||||| | |||| ||||    
T  13549062 ctatcaatgagttcttacaaagagatacaaatgggttacatgaaattaggtttaacaa-gctcacaaagaacaaccctaatttctacccattttcccaat 13549160  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaa 155  Q
    |||||||||||||| |||||||| |||||||||||| | |||||||| ||||| ||||||||||    
T  13549161 ctcaccaatgaacaagacactca-tgattttcactctcccaaggtgtttacaattgtttcccaa 13549223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 8550849 - 8551021
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaac------cctaatttctacc-actttctcaat 91  Q
    ||||||||||||||||||||||  ||||||  |||||||| ||| ||||||| ||||| |||||||||       ||||||||||||| | |||| ||||    
T  8550849 ctatcaatgagttcttacaaagggatacaaatgagttacaagaaattagcttaaacaa-gctcacaaagaacaaacctaatttctacccattttcccaat 8550947  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaac 166  Q
    ||||| |||||||| ||||||||||||||||||||||| ||| |||| ||| ||||||||  ||||||| |||||    
T  8550948 ctcacaaatgaacaagacactcaatgattttcactcacccaatgtgtttac-aatgtttcttaacccaagagaac 8551021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 65 - 166
Target Start/End: Complemental strand, 20762707 - 20762606
Alignment:
Q  65 aaccctaatttctaccacttt--ctcaatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaata 162  Q
    ||||||||||||||||  |||  |||||||||||||||||||| || |||||||||||||||||||| |||||||| ||| ||||||||||||||||| |    
T  20762707 aaccctaatttctacccttttttctcaatctcaccaatgaacaagatactcaatgattttcactcac-caaggtgtttac-aatgtttcccaacccaaga 20762610  T
Q  163 gaac 166  Q
    ||||    
T  20762609 gaac 20762606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 156
Target Start/End: Complemental strand, 29136351 - 29136191
Alignment:
Q  3 atcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctacc-actttctcaatct 93  Q
    ||||||||||||||||||||| ||||||  | ||| || ||| ||||||||||||| |||||||||      |||||||||||||| | |||| ||||||    
T  29136351 atcaatgagttcttacaaagaaatacaaatgggttccaagaaattagcttcaacaa-gctcacaaagaacaaccctaatttctacccattttcccaatct 29136253  T
Q  94 caccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaac 156  Q
    |||||||||||| ||||||| ||||||||||||| | |||||||| ||||| |||||| ||||    
T  29136252 caccaatgaacaagacactc-atgattttcactctcccaaggtgtttacaattgtttcacaac 29136191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 37033134 - 37033297
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaagag---ttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctacc-actttctcaa 90  Q
    ||||||||||||||||||||||| || ||| |    ||||| ||| ||||||||||||| |||||||||      |||||||||||||| | |||| |||    
T  37033134 ctatcaatgagttcttacaaagagatgcaaaatggattacaagaaattagcttcaacaa-gctcacaaagaacaaccctaatttctacccattttcccaa 37033232  T
Q  91 tctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaac 156  Q
    ||||||||||||||| |||||||| |||||||||||| | |||||||| ||||| |||||||||||    
T  37033233 tctcaccaatgaacaagacactca-tgattttcactctcccaaggtgtttacaattgtttcccaac 37033297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 62 - 270
Target Start/End: Original strand, 8871179 - 8871386
Alignment:
Q  62 acaaaccctaatttctaccactttctcaatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaat 161  Q
    |||||||||||||||||||| ||||  |||||||| || ||||| ||||||  ||||||||| ||||  |||||||| ||||||  ||| |||||||||     
T  8871179 acaaaccctaatttctaccattttccaaatctcacaaaagaacaagacact--atgattttcgctcatccaaggtgtttacaaacattttccaacccaag 8871276  T
Q  162 agaacctctcaaaagagcattaatcaaagactc-tcaaccctaaaattaccttatttgatttcctaactttctctctcttaaagc-cttcaaaaaacatg 259  Q
    | ||||| |||| | | || |||||||| | || ||||||||||| ||||||  |||||| |||  | |||||||||||| |||| || | |||||||||    
T  8871277 ataacctttcaagaaaacactaatcaaa-agtcatcaaccctaaagttacctgctttgatatccctagtttctctctcttgaagctctaccaaaaacatg 8871375  T
Q  260 aagaatgaagc 270  Q
    |||||||||||    
T  8871376 aagaatgaagc 8871386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 117 - 268
Target Start/End: Complemental strand, 777225 - 777073
Alignment:
Q  117 gattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaacctctcaaaagagcattaatcaaagactctcaaccctaaaattaccttatt 216  Q
    ||||||||||||| ||| |||| ||||| ||||||||||||||| |||||| ||||| ||| |  |||||||||||  ||||||||||| ||||||  ||    
T  777225 gattttcactcacccaaagtgtttacaa-tgtttcccaacccaagagaacccctcaagagaaccctaatcaaagaccatcaaccctaaagttacctcctt 777127  T
Q  217 tgatttcctaactttctctctcttaaagc-ctt-caaaaaacatgaagaatgaa 268  Q
    ||||||||  | |||||||||||| |||| ||| | ||||| ||||||||||||    
T  777126 tgatttccctagtttctctctcttgaagctcttaccaaaaaaatgaagaatgaa 777073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 46065024 - 46064851
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaac------cctaatttcta-ccactttctcaat 91  Q
    |||| |||||||||||||||||| |||||   |||||||| ||| ||||||||||| | |||||||||       |||||||| || ||| |||| ||||    
T  46065024 ctatgaatgagttcttacaaagagatacacatgagttacaagaaattagcttcaacga-gctcacaaagaacaaacctaatttttatccattttcccaat 46064926  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaacc 167  Q
    ||||| |||||||| ||||||||||||||||||||||| |||||||| ||| ||||||| ||| ||||| ||||||    
T  46064925 ctcacaaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgttttccaccccaagagaacc 46064851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 16455727 - 16455585
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcac-----aaaccctaatttct-accactttctcaatc 92  Q
    ||||||||||||||||||| ||| ||||||  | |||||| ||| ||||||||||||| ||||||     |||  ||||||||| |||| |||  |||||    
T  16455727 ctatcaatgagttcttacacagagatacaaatgggttacaagaaattagcttcaacaa-gctcactagaaaaaatctaatttctcaccattttaccaatc 16455629  T
Q  93 tcaccaatgaacatgacactcaatgattttcactcactcaaggt 136  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||    
T  16455628 tcaccaatgaacaagacactcaatgattttcactcacccaaggt 16455585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 19752792 - 19752629
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaaga--gttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctaccacttt--ctcaa 90  Q
    ||||||||||||||||||||||| ||||||    |||||| ||| ||||||||||||| |||| ||||      ||||||||||||||  |||  |||||    
T  19752792 ctatcaatgagttcttacaaagagatacaaatcggttacaagaaattagcttcaacaa-gctcgcaaagaacaaccctaatttctacccattttactcaa 19752694  T
Q  91 tctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaac 156  Q
    ||||||||||||||| ||||||| ||||||||||||| |||||||||| ||| | | |||||||||    
T  19752693 tctcaccaatgaacaagacactc-atgattttcactctctcaaggtgtttacgattatttcccaac 19752629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 23555327 - 23555499
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctaccactttctc-aat 91  Q
    ||||||||||||||||||||||| ||||||  |||||| | ||| |||| |||||||| | |||||||      ||||||||||||||  ||| || |||    
T  23555327 ctatcaatgagttcttacaaagagatacaaatgagttataagaaattagtttcaacaa-gttcacaaagaacaaccctaatttctacccatttttccaat 23555425  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaac 166  Q
    |||||||| ||| | |||||||||| ||||||| |||| |||||||| ||| ||||||||||||||||| |||||    
T  23555426 ctcaccaaagaataagacactcaataattttcattcacccaaggtgtttac-aatgtttcccaacccaagagaac 23555499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 65 - 156
Target Start/End: Original strand, 37879044 - 37879135
Alignment:
Q  65 aaccctaatttctacc-actttctcaatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaac 156  Q
    |||||||||||||||| | |||| |||||||||||||||||| |||||||| |||||||||||| | |||||||| ||||| |||||||||||    
T  37879044 aaccctaatttctacctattttcccaatctcaccaatgaacaagacactca-tgattttcactctcccaaggtgtttacaattgtttcccaac 37879135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 45644416 - 45644590
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaac-------cctaatttcta-ccactttctcaa 90  Q
    ||||||||||||||||||||||| ||||||  ||||| || ||| |||||||  |||| |||||||||        | ||||||||| ||| ||||||||    
T  45644416 ctatcaatgagttcttacaaagagatacaaatgagttgcaagaaattagctttgacaa-gctcacaaagaacaaaacttaatttctatccattttctcaa 45644514  T
Q  91 tctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaacc 167  Q
    ||||||||||||||| |||||| |||||||||||||||| |||| ||| ||| ||||||| |||||| || ||||||    
T  45644515 tctcaccaatgaacaagacacttaatgattttcactcacccaagatgtttac-aatgttttccaacctaagagaacc 45644590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 15820413 - 15820241
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaac------cctaatttctacca--ctttctcaa 90  Q
    ||||||||||||||||| ||||| ||||||  | |||||| ||| ||||||||||||| |||||||||       |||||||| ||||   ||||| |||    
T  15820413 ctatcaatgagttcttaaaaagagatacaaatgtgttacaagaaattagcttcaacaa-gctcacaaagaacaaacctaatttttacccatctttc-caa 15820316  T
Q  91 tctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaac 166  Q
    | ||||||| ||||| ||||||||||||||||||||||| |||||||| ||| ||||||||||||| ||| |||||    
T  15820315 tatcaccaaagaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaactcaagagaac 15820241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 62 - 160
Target Start/End: Original strand, 37282823 - 37282920
Alignment:
Q  62 acaaaccctaatttctaccactttctcaatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaa 160  Q
    |||||||||||||| ||||| ||| |||||||| |||||||||| ||||||||||| ||||||||||  |||||||| || ||| |||| |||||||||    
T  37282823 acaaaccctaatttataccatttt-tcaatctctccaatgaacaagacactcaatggttttcactcatacaaggtgtttaaaaaagttttccaacccaa 37282920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 62 - 156
Target Start/End: Original strand, 44650294 - 44650388
Alignment:
Q  62 acaaaccctaatttctaccactttctcaatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaac 156  Q
    ||||||| |||||| |||   |||||||||||| |||||||||| |||||||||| |||||||||||| ||| |||| ||||||||||| |||||    
T  44650294 acaaaccataatttttacatttttctcaatctctccaatgaacaagacactcaataattttcactcacccaaagtgtttacaaatgttttccaac 44650388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 47255402 - 47255564
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcaca------aaccctaatttcta-ccactttctcaat 91  Q
    ||||||||||||||||||||||| ||||||  | |||||| ||| ||||||||||| |||||||||      |||||||||||||| ||| |||  ||||    
T  47255402 ctatcaatgagttcttacaaagagatacaaatgggttacaagaaattagcttcaac-aagctcacaaagaacaaccctaatttctacccatttttccaat 47255500  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaac 156  Q
    |||||||||||||| ||||||| ||||||||||||| | |||||  | ||||| | |||||||||    
T  47255501 ctcaccaatgaacaagacactc-atgattttcactctcccaaggcatttacaattatttcccaac 47255564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 41361020 - 41360857
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaac------cctaatttctacc-actttctcaat 91  Q
    ||||||| ||||||||||||||| ||||||  | |||||| ||| |||| |||||||| |||||||||       ||||||||||||| | |||| ||||    
T  41361020 ctatcaacgagttcttacaaagagatacaaatgggttacaagaaattagtttcaacaa-gctcacaaagaacaaacctaatttctacccattttcccaat 41360922  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaaccc 158  Q
    |||||||||||||| |||||||||| |||||||||||| |||| ||| |||  ||||||||||||||    
T  41360921 ctcaccaatgaacaagacactcaat-attttcactcacccaagatgtttac-gatgtttcccaaccc 41360857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 65 - 156
Target Start/End: Complemental strand, 47115206 - 47115115
Alignment:
Q  65 aaccctaatttctaccacttt-ctcaatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaac 156  Q
    ||||||||||||||||| ||| | |||||||||||||||||| ||||||| ||||||||||||| | |||| ||| ||||| |||||||||||    
T  47115206 aaccctaatttctaccaattttcccaatctcaccaatgaacaagacactc-atgattttcactctcccaagatgtttacaattgtttcccaac 47115115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 31925769 - 31925919
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcaca------aaccctaatttcta-ccactttctcaat 91  Q
    ||||||||||||||||||||||| ||||||  | |||||| ||| ||||||||||| |||||||||      | |||||||||||| ||| |||  || |    
T  31925769 ctatcaatgagttcttacaaagagatacaaatgggttacaagaaattagcttcaac-aagctcacaatgaacatccctaatttctacccatttttccact 31925867  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaa 144  Q
    |||||||||||||| ||||||| ||||||||||||| | |||||||| |||||    
T  31925868 ctcaccaatgaacaagacactc-atgattttcactctcccaaggtgtttacaa 31925919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 156
Target Start/End: Complemental strand, 34603681 - 34603519
Alignment:
Q  3 atcaatgagttcttacaaagatatacaaga---gttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctacc-actttctcaatc 92  Q
    ||||||||||||||||||||| ||| || |   |||||| ||| ||||||| ||||| |||||||||      |||||||||||||| | ||| ||||||    
T  34603681 atcaatgagttcttacaaagagataaaaaatgggttacaagaaattagcttaaacaa-gctcacaaagaacaaccctaatttctacccattttttcaatc 34603583  T
Q  93 tcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaac 156  Q
    ||||||||||||| ||||||||   |||||||||  | |||||||| ||||| |||||||||||    
T  34603582 tcaccaatgaacaagacactcatgaattttcactttcccaaggtgtttacaattgtttcccaac 34603519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 13659398 - 13659570
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttcta-ccactttctcaat 91  Q
    ||||||||||||||||||||||| ||| ||  | || ||| ||| ||||||||||||| ||| |||||      |||||||||||| ||  |||| ||||    
T  13659398 ctatcaatgagttcttacaaagagatataaatgggtaacaagaaattagcttcaacaa-gcttacaaaaaacaaccctaatttctatccgttttcccaat 13659496  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaac 166  Q
    ||||| |||||||| ||||||||||||||||||||  | |||||||| ||| |||||||| ||||| || |||||    
T  13659497 ctcacaaatgaacaagacactcaatgattttcactaccccaaggtgtttac-aatgtttctcaacctaagagaac 13659570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 65 - 166
Target Start/End: Original strand, 30476579 - 30476682
Alignment:
Q  65 aaccctaatttctacc-actttctcaatctcaccaat---gaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaa 160  Q
    |||||||||||||||| | |||| |||||||||||||   ||||| || |||||||||||||||| ||| |||||||| ||| |||||||||||||||||    
T  30476579 aaccctaatttctacctattttcccaatctcaccaatattgaacaaga-actcaatgattttcacccacccaaggtgtttac-aatgtttcccaacccaa 30476676  T
Q  161 tagaac 166  Q
     |||||    
T  30476677 gagaac 30476682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 69 - 166
Target Start/End: Original strand, 37560006 - 37560103
Alignment:
Q  69 ctaatttctacc-actttctcaatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaac 166  Q
    |||||||||||| | ||||  ||||||||||||||||| |||||||||||||||||||||||  || |||| ||| ||||||| | ||||||| |||||    
T  37560006 ctaatttctacccattttcctaatctcaccaatgaacaagacactcaatgattttcactcacctaatgtgtttac-aatgttttcaaacccaagagaac 37560103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 7482292 - 7482456
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaaga---gttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctaccacttt-ctcaa 90  Q
    ||||||||||||||||||||||| |||||| |   |||||| ||| ||||||| ||||| |||||||||      ||||||||||||||  ||| | |||    
T  7482292 ctatcaatgagttcttacaaagagatacaaaatgggttacaagaaattagcttaaacaa-gctcacaaagaacaaccctaatttctacccatttacccaa 7482390  T
Q  91 tctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaac 156  Q
    |||||||||||||||  |||||||   |||||||||  | |||||||| ||||| || ||||||||    
T  7482391 tctcaccaatgaacaatacactcatgaattttcactttcccaaggtgtttacaattgcttcccaac 7482456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 88 - 160
Target Start/End: Original strand, 40122355 - 40122426
Alignment:
Q  88 caatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaa 160  Q
    ||||||||| |||||||| |||| ||||||||||| |||||| |||||||| ||| |||||||||||| ||||    
T  40122355 caatctcacaaatgaacaagacattcaatgatttttactcacccaaggtgtttac-aatgtttcccaatccaa 40122426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 128
Target Start/End: Original strand, 44646915 - 44646981
Alignment:
Q  62 acaaaccctaatttctaccactttctcaatctcaccaatgaacatgacactcaatgattttcactca 128  Q
    ||||||| |||||| |||   |||||||||||| |||||||||| |||||||||| |||||||||||    
T  44646915 acaaaccataatttttacatttttctcaatctctccaatgaacaagacactcaataattttcactca 44646981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 246
Target Start/End: Complemental strand, 15820238 - 15820174
Alignment:
Q  182 taatcaaagactctcaaccctaaaattaccttatttgatttcctaactttctctctcttaaagcc 246  Q
    ||||||||||| |||||||||||| ||||||  |||||||||| || ||| |||||||| |||||    
T  15820238 taatcaaagaccctcaaccctaaagttacctcttttgatttcccaagtttttctctcttgaagcc 15820174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 182 - 245
Target Start/End: Complemental strand, 10925154 - 10925091
Alignment:
Q  182 taatcaaagactctcaaccctaaaattaccttatttgatttcctaactttctctctcttaaagc 245  Q
    ||||||||||| |||||||||||| ||||||  |||||||| | || |||||||||||| ||||    
T  10925154 taatcaaagaccctcaaccctaaagttacctcctttgattttccaagtttctctctcttcaagc 10925091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 182 - 245
Target Start/End: Original strand, 13138211 - 13138274
Alignment:
Q  182 taatcaaagactctcaaccctaaaattaccttatttgatttcctaactttctctctcttaaagc 245  Q
    ||||||||||| |||||||||||| ||||||  |||||||||| || ||| |||||||| ||||    
T  13138211 taatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttttctctcttgaagc 13138274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 182 - 245
Target Start/End: Original strand, 37560106 - 37560169
Alignment:
Q  182 taatcaaagactctcaaccctaaaattaccttatttgatttcctaactttctctctcttaaagc 245  Q
    ||||||||||| ||||||| |||| |||||| ||||||||||  || |||||||||||| ||||    
T  37560106 taatcaaagaccctcaaccttaaagttacctcatttgatttctcaagtttctctctcttcaagc 37560169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 182 - 245
Target Start/End: Complemental strand, 49918280 - 49918217
Alignment:
Q  182 taatcaaagactctcaaccctaaaattaccttatttgatttcctaactttctctctcttaaagc 245  Q
    |||||||||||  ||||||||||| ||||||  |||||||||| || |||||||||||| ||||    
T  49918280 taatcaaagaccttcaaccctaaagttacctcctttgatttcccaagtttctctctcttcaagc 49918217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 110 - 156
Target Start/End: Complemental strand, 25652075 - 25652029
Alignment:
Q  110 actcaatgattttcactcactcaaggtgtatacaaatgtttcccaac 156  Q
    |||||||||||||||| |||| ||||||| ||||| |||||||||||    
T  25652075 actcaatgattttcacacacttaaggtgtttacaattgtttcccaac 25652029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 240
Target Start/End: Original strand, 37503791 - 37503849
Alignment:
Q  182 taatcaaagactctcaaccctaaaattaccttatttgatttcctaactttctctctctt 240  Q
    ||||||||||| |||||||||||| | ||||  |||||||||| || ||||||||||||    
T  37503791 taatcaaagaccctcaaccctaaagtcacctcctttgatttcccaagtttctctctctt 37503849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 160
Target Start/End: Original strand, 1050612 - 1050672
Alignment:
Q  99 atgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaa 160  Q
    ||||||| || ||||||| |||| |||||| |||| |||| |||||||||||||||||||||    
T  1050612 atgaacaagagactcaataattt-cactcattcaatgtgtgtacaaatgtttcccaacccaa 1050672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 99
Target Start/End: Complemental strand, 44203668 - 44203631
Alignment:
Q  62 acaaaccctaatttctaccactttctcaatctcaccaa 99  Q
    ||||||||||||||||||| ||||| ||||||||||||    
T  44203668 acaaaccctaatttctacccctttcccaatctcaccaa 44203631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 239
Target Start/End: Complemental strand, 44455091 - 44455034
Alignment:
Q  182 taatcaaagactctcaaccctaaaattaccttatttgatttcctaactttctctctct 239  Q
    ||||||||||| |||||||||||| ||||||  |||||||| | || |||||||||||    
T  44455091 taatcaaagaccctcaaccctaaagttacctcctttgatttaccaagtttctctctct 44455034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 134 - 170
Target Start/End: Complemental strand, 11031337 - 11031301
Alignment:
Q  134 ggtgtatacaaatgtttcccaacccaatagaacctct 170  Q
    ||||| ||||||||||||||||||||| |||||||||    
T  11031337 ggtgtttacaaatgtttcccaacccaagagaacctct 11031301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 65 - 170
Target Start/End: Complemental strand, 51765429 - 51765326
Alignment:
Q  65 aaccctaatttctaccactttctc--aatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaata 162  Q
    ||||||||||||||||  ||||||  ||||  ||||| ||||| ||||||||||||||| ||||||| |||||||| ||| ||||||| ||||||||| |    
T  51765429 aaccctaatttctacccttttctcccaatcaaaccaa-gaacaagacactcaatgatttacactcac-caaggtgtttac-aatgttt-ccaacccaaga 51765334  T
Q  163 gaacctct 170  Q
    ||| ||||    
T  51765333 gaagctct 51765326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 89; Significance: 7e-43; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 9 - 270
Target Start/End: Original strand, 3038973 - 3039240
Alignment:
Q  9 gagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaa------accctaatttctaccacttt-ctcaatctcaccaa 99  Q
    ||||||||||||||| ||||||  | |||||| ||| |||||||||| |||||||||||      |||||||||||||||| ||| | ||||||||||||    
T  3038973 gagttcttacaaagagatacaaatgggttacaagaaattagcttcaa-aaagctcacaatgaacaaccctaatttctaccaattttcccaatctcaccaa 3039071  T
Q  100 tgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaacctctcaaaagagcattaatcaaagactctcaac 199  Q
    |||||| |||| ||||||||||||||||||||||||||| ||| ||||||||||||||||| |||||||||||| | | |  ||||||||||| ||||||    
T  3039072 tgaacaagacattcaatgattttcactcactcaaggtgtttac-aatgtttcccaacccaagagaacctctcaagaaaaccctaatcaaagaccctcaac 3039170  T
Q  200 cctaaaattaccttatttgatttcctaactttctctctcttaaagccttcaaaaaacatgaagaatgaagc 270  Q
    |||||| ||||||  ||||| |||| || ||| |||||||| ||||  ||  ||||  |||||||||||||    
T  3039171 cctaaagttacctcctttga-ttcccaagtttttctctcttgaagctctctcaaaaattgaagaatgaagc 3039240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 9183093 - 9183331
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctacc-actttctcaat 91  Q
    ||||||||||||||||||||||| ||||||  | |||||| ||| ||||||||||||||  |||||||      |||||||||||||| | |||||||||    
T  9183093 ctatcaatgagttcttacaaagagatacaaatgggttacaagaaattagcttcaacaaat-tcacaaagaacaaccctaatttctacccattttctcaat 9183191  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaacctctcaaaagagcattaatcaaaga 191  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||| ||| ||||||||||||||||  |||| |||            ||||||||||    
T  9183192 ctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaacccaggagaa-ctc------------taatcaaaga 9183277  T
Q  192 ctctcaaccctaaaattaccttatttgatttcctaactttctctctcttaaagc 245  Q
    | |||||||||||| ||||||  |||||||||| || |||||||||||| ||||    
T  9183278 ccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttcaagc 9183331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 62 - 269
Target Start/End: Complemental strand, 4045460 - 4045257
Alignment:
Q  62 acaaaccctaatttctaccactttctcaatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaat 161  Q
    |||||||||||||||||||| |||| ||||||| ||||| |||| ||||||||||||||||||||||| | |||||| ||||||||||||||||| |||     
T  4045460 acaaaccctaatttctaccattttcccaatctctccaataaacaagacactcaatgattttcactcaccctaggtgtttacaaatgtttcccaactcaag 4045361  T
Q  162 agaacctctcaaaagagcattaatcaaagactctcaaccctaaaattaccttatttgatttcctaactttctctctcttaaagccttc--aaaaaacatg 259  Q
    |||||| |||     | || | | || |||||||||| || ||| ||||||   ||||||||  || ||||||||||||||||||| |  ||||||||||    
T  4045360 agaacc-ctc-----accagtcaccatagactctcaatccaaaagttacctccattgatttctcaagtttctctctcttaaagcctccctaaaaaacatg 4045267  T
Q  260 aagaatgaag 269  Q
    ||||||||||    
T  4045266 aagaatgaag 4045257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 28137470 - 28137642
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctacc-actttctcaat 91  Q
    ||||||||||||||||||||||| ||||||  | |||||| ||| ||||||| ||||| |||||||||      |||||||||||||| | |||| || |    
T  28137470 ctatcaatgagttcttacaaagaaatacaaatgggttacaagaaattagcttaaacaa-gctcacaaagaacaaccctaatttctacccattttcccatt 28137568  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaac 166  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||| ||| ||||||||||||||||| |||||    
T  28137569 ctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaacccaagagaac 28137642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 5406262 - 5406424
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaagag--ttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctaccactttctcaatc 92  Q
    ||||||||||||||||||||||| |||||| ||  ||||| ||| |||||||  |||| | |||||||      ||||||||||||||| |||| |||||    
T  5406262 ctatcaatgagttcttacaaagagatacaaaagggttacaagaaattagctttgacaa-gttcacaaagaacaaccctaatttctaccattttcccaatc 5406360  T
Q  93 tcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaaccc 158  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||| ||| |||||||||||||||    
T  5406361 tcaccaatgaacaagacactcaatgattttcactcac-caaggtgtttac-aatgtttcccaaccc 5406424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 5410587 - 5410749
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaagag--ttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctaccactttctcaatc 92  Q
    ||||||||||||||||||||||| |||||| ||  ||||| ||| |||||||  |||| | |||||||      ||||||||||||||| |||| |||||    
T  5410587 ctatcaatgagttcttacaaagagatacaaaagggttacaagaaattagctttgacaa-gttcacaaagaacaaccctaatttctaccattttcccaatc 5410685  T
Q  93 tcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaaccc 158  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||| ||| |||||||||||||||    
T  5410686 tcaccaatgaacaagacactcaatgattttcactcac-caaggtgtttac-aatgtttcccaaccc 5410749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 2171594 - 2171768
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa-gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctaccacttt-ctcaatc 92  Q
    ||||||||||||||||||||||| |||||| | |||||| ||| |||||||  |||| | |||||||      ||||||||||||||| ||| | |||||    
T  2171594 ctatcaatgagttcttacaaagagatacaaagggttacaagaaattagctttgacaa-gttcacaaagaacaaccctaatttctaccatttttcccaatc 2171692  T
Q  93 tcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaacctct 170  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||| ||| ||||||||||||||||| |||| ||||    
T  2171693 tcaccaatgaacaagacactcaatgattttcactcac-caaggtgtttac-aatgtttcccaacccaagagaaactct 2171768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 5043733 - 5043571
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaac------cctaatttctac-cactttctcaat 91  Q
    ||||||||||||||||||||||| ||||||  |||||||| ||| ||||||||||||| |||||||||       |||||||||||| || |||||||||    
T  5043733 ctatcaatgagttcttacaaagagatacaaatgagttacaagaaattagcttcaacaa-gctcacaaagaacaaacctaatttctactcattttctcaat 5043635  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaac 156  Q
    ||||| |||||||| |||||||| |||||||||||| | |||||||| ||||| |||||||||||    
T  5043634 ctcacgaatgaacaagacactca-tgattttcactctcacaaggtgtttacaattgtttcccaac 5043571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 21593770 - 21593608
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctacc-actttctcaat 91  Q
    ||||||||||||||||||||||| ||||||  | |||||| ||| ||||||||||||| |||||||||      |||||||||||||| | |||| ||||    
T  21593770 ctatcaatgagttcttacaaagagatacaaatgggttacaagaaattagcttcaacaa-gctcacaaagaacaaccctaatttctacccattttcccaat 21593672  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaac 156  Q
    |||||||||||||| |||||||| |||||||||||| | |||||||| ||||| |||||||||||    
T  21593671 ctcaccaatgaacaagacactca-tgattttcactctcccaaggtgtttacaattgtttcccaac 21593608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 17763096 - 17762933
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctacc-actttctcaat 91  Q
    |||||||||||||||| |||| | ||||||  |||||||| ||| ||||||||||||| |||||||||      |||||||||||||| | |||||||||    
T  17763096 ctatcaatgagttcttccaaaaagatacaaatgagttacaagaaattagcttcaacaa-gctcacaaagaacaaccctaatttctacccattttctcaat 17762998  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaac 156  Q
    |||||||||||||| ||||||||   |||||||||| ||||| |||| ||||| |||||||||||    
T  17762997 ctcaccaatgaacaagacactcatgaattttcactctctcaaagtgtttacaattgtttcccaac 17762933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 26954348 - 26954510
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctaccactttctcaatc 92  Q
    ||||||||||||||||||||||| |||||   |||||||| ||| ||||||||||||| |||||||||      ||||||||| ||||| |||| |||||    
T  26954348 ctatcaatgagttcttacaaagagatacagatgagttacaagaaattagcttcaacaa-gctcacaaagaacaaccctaatttataccaatttcccaatc 26954446  T
Q  93 tcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacc 157  Q
    ||||  ||||||| ||||||||||||||||||||| |  ||||||| ||| ||||||||||||||    
T  26954447 tcacatatgaacaagacactcaatgattttcactccccaaaggtgtttac-aatgtttcccaacc 26954510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 31404737 - 31404907
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaagag--ttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctaccactttctcaatc 92  Q
    ||||||||||||||||||||||| |||||| ||  ||||| ||| |||||||  |||| | |||||||      ||||||||||||||| |||| |||||    
T  31404737 ctatcaatgagttcttacaaagagatacaaaagggttacaagaaattagctttgacaa-gttcacaaagaacaaccctaatttctaccattttcccaatc 31404835  T
Q  93 tcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaac 166  Q
    ||||  ||||||| ||||||||||||||||||||||| |||||||| ||| ||||||| ||||||||| |||||    
T  31404836 tcactgatgaacaagacactcaatgattttcactcac-caaggtgtttac-aatgttttccaacccaagagaac 31404907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 2973001 - 2973163
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaac------cctaatttctacc-actttctcaat 91  Q
    ||||||||||||||||||||||| ||||||  | |||||| ||| ||||||||||||| |||||||||       ||||||||||||| | |||| ||||    
T  2973001 ctatcaatgagttcttacaaagagatacaaatgggttacaagaaattagcttcaacaa-gctcacaaagaacaaacctaatttctacccattttcccaat 2973099  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaac 156  Q
    |||||||||||||| |||||| | |||||||||||| | |||||||| ||||| |||||||||||    
T  2973100 ctcaccaatgaacacgacactta-tgattttcactctcccaaggtgtttacaattgtttcccaac 2973163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 65 - 158
Target Start/End: Original strand, 5413527 - 5413618
Alignment:
Q  65 aaccctaatttctaccactttctcaatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaaccc 158  Q
    ||||||||||||||||  |||| |||||||||||||||||| ||||||||||||||||||||||| ||| |||| ||| |||||||||||||||    
T  5413527 aaccctaatttctacctttttcccaatctcaccaatgaacaagacactcaatgattttcactcac-caatgtgtttac-aatgtttcccaaccc 5413618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 3808770 - 3808933
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaaga---gttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctacc-actttctcaa 90  Q
    ||||||||||||||||||||||| |||||| |   |||||| ||| |||| |||||||| |||||||||      |||||||||||||| | |||| |||    
T  3808770 ctatcaatgagttcttacaaagagatacaaaatgggttacaagaaattagtttcaacaa-gctcacaaagaacaaccctaatttctacctattttcccaa 3808868  T
Q  91 tctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaac 156  Q
    ||||||||||||||| ||||||   |||||||||||| | |||||||| ||||| |||||||||||    
T  3808869 tctcaccaatgaacaagacacttg-tgattttcactctcccaaggtgtttacaattgtttcccaac 3808933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 65 - 166
Target Start/End: Original strand, 16452462 - 16452563
Alignment:
Q  65 aaccctaatttctaccactttctc--aatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaata 162  Q
    ||||||||||||||||  ||| ||  ||||||||||||||||| ||||||||||||||||||||||| |||||||| ||| |||||||| |||||||| |    
T  16452462 aaccctaatttctacccttttttcccaatctcaccaatgaacaagacactcaatgattttcactcac-caaggtgtttac-aatgtttctcaacccaaga 16452559  T
Q  163 gaac 166  Q
    ||||    
T  16452560 gaac 16452563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 166
Target Start/End: Original strand, 33211252 - 33211419
Alignment:
Q  6 aatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctaccacttt-ctcaatctcac 96  Q
    |||||||||||||||||| ||||||  ||| |||| ||| ||| ||||| ||| |||||||||      || |||||||||||| ||| | |||||||||    
T  33211252 aatgagttcttacaaagagatacaaatgagctacaagaaattaacttcatcaa-gctcacaaagaacaaccataatttctaccaattttcccaatctcac 33211350  T
Q  97 caatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaac 166  Q
    |||||||||  ||||||||||||||||| | || |||||||| ||| ||||||||||||||||| |||||    
T  33211351 caatgaacaaaacactcaatgattttcagtgacccaaggtgtttac-aatgtttcccaacccaagagaac 33211419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 21589037 - 21588916
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcaca------aaccctaatttcta-ccactttctcaat 91  Q
    ||||||||||||||||||||||| ||||||  | |||||| ||| ||||||||||| |||||||||      |||||||||||||| ||| |||| ||||    
T  21589037 ctatcaatgagttcttacaaagagatacaaatgggttacaagaaattagcttcaac-aagctcacaaagaacaaccctaatttctacccattttcccaat 21588939  T
Q  92 ctcaccaatgaacatgacactca 114  Q
    |||||||||||||| ||||||||    
T  21588938 ctcaccaatgaacaagacactca 21588916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 65 - 166
Target Start/End: Original strand, 30834669 - 30834770
Alignment:
Q  65 aaccctaatttctaccactttctc--aatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaata 162  Q
    ||||||||||||||||  ||| ||  ||||||||||||||||| ||||||||||||||||||||||| | |||||| ||| |||||||| |||||||| |    
T  30834669 aaccctaatttctacccttttttcccaatctcaccaatgaacaagacactcaatgattttcactcac-cgaggtgtttac-aatgtttctcaacccaaga 30834766  T
Q  163 gaac 166  Q
    ||||    
T  30834767 gaac 30834770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 3 - 166
Target Start/End: Original strand, 33160416 - 33160587
Alignment:
Q  3 atcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctaccactttctc--aatc 92  Q
    ||||||||||||||||||||| ||||||  |||||||| ||| |||||||  |||| | |||||||      | ||||||||||||  ||| ||  ||||    
T  33160416 atcaatgagttcttacaaagagatacaaaagagttacaagaaattagctttgacaa-gttcacaaagaacaactctaatttctacctttttttcccaatc 33160514  T
Q  93 tcaccaatgaacatgacactcaatga-ttttcactcactcaaggtgtatacaaatgtttcccaacccaatagaac 166  Q
    ||||||||||| | |||||||||||| ||||||||||| |||||||| ||| ||||||||||||||||| |||||    
T  33160515 tcaccaatgaataagacactcaatgatttttcactcac-caaggtgtttac-aatgtttcccaacccaagagaac 33160587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 26830185 - 26830348
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaagag--ttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctaccactttctc-aat 91  Q
    ||||||||||||||||||||||| ||||||  |  ||||| ||| ||||||||||||| |||||||||      | ||||||||||||  ||| || |||    
T  26830185 ctatcaatgagttcttacaaagagatacaaatggattacaagaaattagcttcaacaa-gctcacaaagaacaactctaatttctacccatttttccaat 26830283  T
Q  92 ctcacc-aatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaac 156  Q
    |||||| |||||||| |||||||| |||||||||||| | |||||||| ||||| ||||| |||||    
T  26830284 ctcacccaatgaacaagacactca-tgattttcactctcccaaggtgtttacaattgttttccaac 26830348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 17758129 - 17757995
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcaca------aaccctaatttcta-ccactttctcaat 91  Q
    ||||||||||||||||||||||| ||||||  | |||||| ||| ||||||||||| |||||||||      |||||||||||||| ||| |||| ||||    
T  17758129 ctatcaatgagttcttacaaagagatacaaatgggttacaagaaattagcttcaac-aagctcacaaagaacaaccctaatttctacccattttcccaat 17758031  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactc 127  Q
    ||||| |||||| | ||||||||   ||||||||||    
T  17758030 ctcacaaatgaagaagacactcatgaattttcactc 17757995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 88 - 156
Target Start/End: Original strand, 603237 - 603304
Alignment:
Q  88 caatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaac 156  Q
    |||||||||||||||||| ||||||| ||||||||||||  | |||||||| ||||| |||||||||||    
T  603237 caatctcaccaatgaacaagacactc-atgattttcactatcccaaggtgtttacaattgtttcccaac 603304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 107 - 166
Target Start/End: Complemental strand, 16567198 - 16567140
Alignment:
Q  107 gacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaac 166  Q
    ||||||||||||||||||||||| |||||||| ||| ||||||||| ||||||| |||||    
T  16567198 gacactcaatgattttcactcacccaaggtgtttac-aatgtttccaaacccaagagaac 16567140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 6 - 156
Target Start/End: Original strand, 22424892 - 22425052
Alignment:
Q  6 aatgagttcttacaaagatatacaaga----gttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctaccactttctc-aatctc 94  Q
    |||||||||||||||||| |||||| |    |||||| ||| ||||||| ||||| |||||||||      ||||||||||||||  ||| || ||||||    
T  22424892 aatgagttcttacaaagagatacaaaaatgggttacaagaaattagcttaaacaa-gctcacaaagaacaaccctaatttctacccatttttccaatctc 22424990  T
Q  95 accaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaac 156  Q
    ||||| ||||| ||||||||   |||||||||| | ||| |||| ||||| |||||||||||    
T  22424991 accaacgaacaagacactcatgaattttcactctcccaaagtgtttacaattgtttcccaac 22425052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 107 - 166
Target Start/End: Complemental strand, 16569035 - 16568977
Alignment:
Q  107 gacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaac 166  Q
    |||||||||||||||||||| || |||||||| ||| ||||||||| ||||||| |||||    
T  16569035 gacactcaatgattttcacttacccaaggtgtttac-aatgtttccaaacccaagagaac 16568977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 182 - 245
Target Start/End: Original strand, 26954522 - 26954585
Alignment:
Q  182 taatcaaagactctcaaccctaaaattaccttatttgatttcctaactttctctctcttaaagc 245  Q
    |||||||||||||||||||||||| ||||||  |||||||||| || |||  ||||||| ||||    
T  26954522 taatcaaagactctcaaccctaaagttacctcctttgatttcccaagttttcctctcttgaagc 26954585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 99
Target Start/End: Complemental strand, 6027283 - 6027246
Alignment:
Q  62 acaaaccctaatttctaccactttctcaatctcaccaa 99  Q
    ||||||||||||||||||| ||||| ||||||||||||    
T  6027283 acaaaccctaatttctacccctttcccaatctcaccaa 6027246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 99
Target Start/End: Complemental strand, 13153950 - 13153913
Alignment:
Q  62 acaaaccctaatttctaccactttctcaatctcaccaa 99  Q
    ||||||||||||||||||| ||||| ||||||||||||    
T  13153950 acaaaccctaatttctacccctttcccaatctcaccaa 13153913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 99
Target Start/End: Complemental strand, 25421342 - 25421305
Alignment:
Q  62 acaaaccctaatttctaccactttctcaatctcaccaa 99  Q
    ||||||||||||||||||| ||||| ||||||||||||    
T  25421342 acaaaccctaatttctacccctttcccaatctcaccaa 25421305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 99
Target Start/End: Original strand, 33342238 - 33342275
Alignment:
Q  62 acaaaccctaatttctaccactttctcaatctcaccaa 99  Q
    ||||||||||||||||||| ||||| ||||||||||||    
T  33342238 acaaaccctaatttctacccctttcccaatctcaccaa 33342275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 99
Target Start/End: Complemental strand, 34164893 - 34164856
Alignment:
Q  62 acaaaccctaatttctaccactttctcaatctcaccaa 99  Q
    ||||||||||||||||||| ||||| ||||||||||||    
T  34164893 acaaaccctaatttctacccctttcccaatctcaccaa 34164856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 99
Target Start/End: Complemental strand, 34167115 - 34167078
Alignment:
Q  62 acaaaccctaatttctaccactttctcaatctcaccaa 99  Q
    ||||||||||||||||||| ||||| ||||||||||||    
T  34167115 acaaaccctaatttctacccctttcccaatctcaccaa 34167078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 88; Significance: 3e-42; HSPs: 77)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 66 - 245
Target Start/End: Original strand, 37229857 - 37230036
Alignment:
Q  66 accctaatttctaccactttctcaatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaa 165  Q
    |||||||||||||||| |||| |||||||||||||||||| |||||||| |||||||||||||| |||||||| ||||||||||| ||||||||| ||||    
T  37229857 accctaatttctaccattttcccaatctcaccaatgaacaagacactcattgattttcactcacccaaggtgtttacaaatgttttccaacccaagagaa 37229956  T
Q  166 cctctcaaaagagcattaatcaaagactctcaaccctaaaattaccttatttgatttcctaactttctctctcttaaagc 245  Q
    |||||||| | | |  ||||||||||| || ||||||||| ||||||  |||||||||  || ||| |||||||| ||||    
T  37229957 cctctcaagataaccctaatcaaagaccctaaaccctaaagttacctcctttgatttctcaagtttgtctctcttgaagc 37230036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 4 - 245
Target Start/End: Original strand, 36463454 - 36463702
Alignment:
Q  4 tcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttcta-ccactttctcaatctc 94  Q
    |||| ||||||||||||||| ||||||  | |||||| ||| ||||||||||||| ||||||||       |||||||||||| ||| |||| |||||||    
T  36463454 tcaaagagttcttacaaagagatacaaatgggttacaagaaattagcttcaacaa-gctcacaatgaacagccctaatttctatccattttcccaatctc 36463552  T
Q  95 accaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaacctctcaaaagagcattaatcaaagactc 194  Q
    ||||||||||| |||||||||||| |||||||||| |||||||| ||| ||||||||||||| ||| |||||||||||| | | | |||||||||||| |    
T  36463553 accaatgaacaagacactcaatgaatttcactcacccaaggtgtttac-aatgtttcccaactcaagagaacctctcaagaaaaccttaatcaaagaccc 36463651  T
Q  195 tcaaccctaaaattaccttatttgatttcctaactttctctctcttaaagc 245  Q
    |||| |||||| ||||||  | |||||||| || ||| |||||||| ||||    
T  36463652 tcaatcctaaagttacctcctatgatttcccaagtttttctctcttgaagc 36463702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 54199968 - 54200201
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctacc-actttctcaat 91  Q
    ||||||||||||||||||||||| ||||||  | |||||| ||| ||||||||||||| | |||||||      |||||||||||||| | |||| ||||    
T  54199968 ctatcaatgagttcttacaaagagatacaaatgggttacaagaaattagcttcaacaa-gttcacaaagaacaaccctaatttctacccattttcccaat 54200066  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaacctctcaaaagagcattaatcaaaga 191  Q
    |||||||||||||| ||||||||||||||||||||||| ||| |||| ||| ||||||||||||||||| |||| |||            ||||||||||    
T  54200067 ctcaccaatgaacaagacactcaatgattttcactcacccaatgtgtttac-aatgtttcccaacccaagagaa-ctc------------taatcaaaga 54200152  T
Q  192 ctctcaaccctaaaattaccttatttgatttcctaactttctctctctt 240  Q
    | |||||||||||| ||||||  ||||||||||||| ||||||||||||    
T  54200153 ccctcaaccctaaagttacctcctttgatttcctaagtttctctctctt 54200201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 62 - 270
Target Start/End: Original strand, 45687313 - 45687522
Alignment:
Q  62 acaaaccctaatttctacc-actttctcaatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaa 160  Q
    ||||| |||||||||| || | |||| |||||||||||||||||| |||| ||||  | |||||||||| |||||||| ||||| |||||||||||||||    
T  45687313 acaaaacctaatttcttcccattttcccaatctcaccaatgaacaagacaatcaaaaaatttcactcacccaaggtgtttacaa-tgtttcccaacccaa 45687411  T
Q  161 tagaacctctcaaaagagcattaatcaaagactctcaaccctaaaattaccttatttgatttcctaactttctctctcttaaagcc---ttcaaaaaaca 257  Q
     |||||| ||||| ||| |  ||||||||||| |||||||||||| ||||||  ||||||||||  | |||||||||||| |||||   ||||||||  |    
T  45687412 gagaacccctcaagagaaccctaatcaaagaccctcaaccctaaagttacctcctttgatttccctagtttctctctcttgaagcccttttcaaaaa--a 45687509  T
Q  258 tgaagaatgaagc 270  Q
    |||||||||||||    
T  45687510 tgaagaatgaagc 45687522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 5429785 - 5429613
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctac-cactttctcaat 91  Q
    ||||||||||||||||||||| | ||||||  | |||||| ||| ||||||||||||| |||||| ||      ||||||||||||| || |||| ||||    
T  5429785 ctatcaatgagttcttacaaatagatacaaatgggttacaagaaattagcttcaacaa-gctcacgaagaataaccctaatttctactcattttcccaat 5429687  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaac 166  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||| ||| ||||||||||||||||| |||||    
T  5429686 ctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaacccaagagaac 5429613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 26175698 - 26175870
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctacc-actttctcaat 91  Q
    ||||||||||||||||||||||| ||||||  | |||||| ||| |||| |||||||| |||||||||      ||||||||||| || | |||| ||||    
T  26175698 ctatcaatgagttcttacaaagagatacaaatgggttacaagaaattagtttcaacaa-gctcacaaagaacaaccctaatttctccccattttcccaat 26175796  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaac 166  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||| ||| ||||||||||||||||| |||||    
T  26175797 ctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaacccaacagaac 26175870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 9927520 - 9927758
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctacc-actttctcaat 91  Q
    ||||||||||||||||||||||| ||||||  | |||||| ||| ||||||||||||| | |||||||      |||||||||||||| | |||| ||||    
T  9927520 ctatcaatgagttcttacaaagagatacaaatgggttacaagaaattagcttcaacaa-gttcacaaagaacaaccctaatttctacccattttcccaat 9927618  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaacctctcaaaagagcattaatcaaaga 191  Q
    |||||||||||| | |||||||| |||||||||||||| |||||||| ||| ||||||||||||||||| ||||             | |||||||||||    
T  9927619 ctcaccaatgaataagacactcagtgattttcactcac-caaggtgtttac-aatgtttcccaacccaagagaa-------------ctttaatcaaaga 9927703  T
Q  192 ctctcaaccctaaaattaccttatttgatttcctaactttctctctcttaaagcc 246  Q
    | |||||||||||| ||||||  |||||||||| || |||||||||||| |||||    
T  9927704 ccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttcaagcc 9927758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 24969218 - 24969045
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaacc------ctaatttctaccactttctc-aat 91  Q
    |||||||| |||||||||||||| ||||||  |||||||| ||| ||||||||||||| |||||||||        ||||||||||||  ||| || |||    
T  24969218 ctatcaattagttcttacaaagagatacaaatgagttacaagaaattagcttcaacaa-gctcacaaagaacaaatctaatttctacccatttttccaat 24969120  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaac 166  Q
    |||||||| ||||| ||| ||||||||||||||||||| |||||||| ||||||||||||||||||||| |||||    
T  24969119 ctcaccaaagaacaagactctcaatgattttcactcacccaaggtgtttacaaatgtttcccaacccaagagaac 24969045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 31474257 - 31474082
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaac-------cctaatttctacc-actttctcaa 90  Q
    ||||||||||||||||||||||| ||||||  |||||||| ||| |||||||||||||| |||| |||        ||||||||||||| | ||||||||    
T  31474257 ctatcaatgagttcttacaaagagatacaaatgagttacaagaaattagcttcaacaaa-ctcaaaaagaacaagacctaatttctacccattttctcaa 31474159  T
Q  91 tctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaacct 168  Q
    ||||||||||||||| ||||||||||||||||||||||| ||| |||| ||| |||||||||||  |||| |||||||    
T  31474158 tctcaccaatgaacaagacactcaatgattttcactcacccaaagtgtttac-aatgtttcccactccaagagaacct 31474082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 34570476 - 34570648
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctacc-actttctcaat 91  Q
    ||||||||||||||||||||||| ||||||  | |||||| ||| ||||||||||||| | |||||||      |||||||||||||| | |||| ||||    
T  34570476 ctatcaatgagttcttacaaagagatacaattgggttacaagaaattagcttcaacaa-gttcacaaagaacaaccctaatttctacctattttcccaat 34570574  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaac 166  Q
    |||||||||||||| ||||||||||||||||||||||| |||| ||| | | ||||||||||||||||| |||||    
T  34570575 ctcaccaatgaacaagacactcaatgattttcactcacccaagatgttttc-aatgtttcccaacccaagagaac 34570648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 48893700 - 48893868
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaac----------cctaatttctacc-actttct 87  Q
    ||||||| ||||||||||||||| ||||||  |||||||| ||| ||||||||||||| ||||||||||          ||||||||||||| | |||||    
T  48893700 ctatcaaagagttcttacaaagagatacaaatgagttacaagaaattagcttcaacaa-gctcacaaacaatgaacaaccctaatttctacccattttct 48893798  T
Q  88 caatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaaccc 158  Q
    |||||||||||||||||| ||||||||||||||||||||||| |||||||| ||| ||||||||| |||||    
T  48893799 caatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttccaaaccc 48893868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 56178699 - 56178870
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaagag--ttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctaccacttt-ctcaat 91  Q
    ||||||||||||||||||||||| |||||| ||  ||||| ||| ||||||||||||| | |||||||      ||||||||||||||  ||| | ||||    
T  56178699 ctatcaatgagttcttacaaagagatacaaaagggttacaagaaattagcttcaacaa-gttcacaaagaacaaccctaatttctaccctttttcccaat 56178797  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaac 166  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||| ||| ||||||||||||||||| |||||    
T  56178798 ctcaccaatgaacaagacactcaatgattttcactcac-caaggtgtttac-aatgtttcccaacccaagagaac 56178870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 65 - 166
Target Start/End: Original strand, 52095495 - 52095596
Alignment:
Q  65 aaccctaatttctacc-actttctcaatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatag 163  Q
    |||||||||||||||| | |||| |||||||||||||||||| ||||||||||||||||||||||| |||||||| ||| ||||||||||||||||| ||    
T  52095495 aaccctaatttctacccattttcccaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaacccaagag 52095593  T
Q  164 aac 166  Q
    |||    
T  52095594 aac 52095596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 54883126 - 54882964
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctacc-actttctcaat 91  Q
    ||||||||||||||||||||||| ||||||  | |||||| ||| ||||||||||||| |||||||||      |||||||||||||| | |||| ||||    
T  54883126 ctatcaatgagttcttacaaagagatacaaatgggttacaagaaattagcttcaacaa-gctcacaaaaaacaaccctaatttctacccattttcccaat 54883028  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaac 156  Q
    |||||||||||||| |||||||| |||||||||||| | |||||||| ||||| |||||||||||    
T  54883027 ctcaccaatgaacaagacactca-tgattttcactctcccaaggtgtttacaattgtttcccaac 54882964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 47038473 - 47038643
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaagag-ttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctaccactttctcaatct 93  Q
    |||||||||||| |||||||| | ||||||  | ||||| ||| ||||||||||||| |||||||||      ||||||||||||||  |||  ||||||    
T  47038473 ctatcaatgagtccttacaaacagatacaaatgattacaagaaattagcttcaacaa-gctcacaaagaacaaccctaatttctacccattttccaatct 47038571  T
Q  94 caccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaac 166  Q
    |||||||||||| ||||||||||||||||||||||| |||||||| ||  ||||||||||||||||| |||||    
T  47038572 caccaatgaacaagacactcaatgattttcactcacccaaggtgttta-taatgtttcccaacccaagagaac 47038643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 50673909 - 50674070
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaac-----cctaatttctac-cactttctcaatc 92  Q
    ||||||||||||||||||||||| ||||||  |||||||| ||| ||||||||||||| |||||||||      |||||||||||| || ||||||||||    
T  50673909 ctatcaatgagttcttacaaagagatacaaatgagttacaagaaattagcttcaacaa-gctcacaaagacaatcctaatttctactcattttctcaatc 50674007  T
Q  93 tcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaac 156  Q
    |||| |||||||| ||||||| ||||||||||||| | |||||||| ||||| ||||| |||||    
T  50674008 tcacaaatgaacacgacactc-atgattttcactctcccaaggtgtttacaattgttttccaac 50674070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 68 - 167
Target Start/End: Original strand, 52467490 - 52467590
Alignment:
Q  68 cctaatttctacc-actttctcaatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaac 166  Q
    ||||||||||||| | |||| ||| ||||| |||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||||||| |||||    
T  52467490 cctaatttctacccattttcccaacctcacaaatgaacaagacactcaatgattttcactcacccaaggtgtttacaaatgtttcccaacccaagagaac 52467589  T
Q  167 c 167  Q
    |    
T  52467590 c 52467590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 48143149 - 48142915
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaagag--ttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctaccactttctc--aa 90  Q
    |||||||||||||||||  |||| |||||| ||  ||||| ||| ||||||||||||| | |||||||      ||||||||||||||  ||| ||  ||    
T  48143149 ctatcaatgagttcttatgaagagatacaaaagggttacaagaaattagcttcaacaa-gttcacaaagaacaaccctaatttctacctttttttcccaa 48143051  T
Q  91 tctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaacctctcaaaagagcattaatcaaag 190  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||| ||| ||||||||||||||||| |||| |||            |||||||||    
T  48143050 tctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaacccaagagaa-ctc------------taatcaaag 48142965  T
Q  191 actctcaaccctaaaattaccttatttgatttcctaactttctctctctt 240  Q
    || |||||||||||| ||||||  |||||||||| || ||||||||||||    
T  48142964 accctcaaccctaaagttacctcctttgatttcccaagtttctctctctt 48142915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 36994630 - 36994479
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctacc-actttctcaat 91  Q
    ||||||||||||||||||||||  ||||||  | |||||| ||| ||||||||||||| |||||||||      || ||||||||||| | |||| ||||    
T  36994630 ctatcaatgagttcttacaaagggatacaaatgggttacaagaaattagcttcaacaa-gctcacaaagaacaaccttaatttctacccattttcccaat 36994532  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaa 144  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||| |||||    
T  36994531 ctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttacaa 36994479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 83 - 169
Target Start/End: Complemental strand, 51337080 - 51336995
Alignment:
Q  83 tttctcaatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaacctc 169  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||| ||||||| ||||||||| ||||||||    
T  51337080 tttctcaatctcaccaatgaacaggacactcaatgattttcactcacccaaggtgtttac-aatgttttccaacccaagagaacctc 51336995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 4588065 - 4587889
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaagag--ttacacgaatttagcttcaacaaagctcacaaac-------cctaatttctaccacttt-ctcaa 90  Q
    ||||||||||||||||||||||| |||||| ||  ||||| ||| ||||||||||||| ||| |||||        | |||||||||||  ||| | |||    
T  4588065 ctatcaatgagttcttacaaagagatacaaaagggttacaagaaattagcttcaacaa-gcttacaaagaacaaatcttaatttctaccttttttcccaa 4587967  T
Q  91 tctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaacctc 169  Q
    | ||||||||||||||||||||||||||||||||||||| |||||||| ||| ||||||||||||||||  ||||||||    
T  4587966 tttcaccaatgaacatgacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaacccatgagaacctc 4587889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 3913554 - 3913409
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctac-cactttctcaat 91  Q
    ||||||||||||||||||||||||||||||  | |||| | ||| |||||||||||||| ||||||||      | ||||||||||| || |||| ||||    
T  3913554 ctatcaatgagttcttacaaagatatacaaatgggttaaaagaaattagcttcaacaaa-ctcacaaagaacagctctaatttctactcattttcccaat 3913456  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgt 138  Q
    ||||| |||||||| ||||||||||||||||||||||| ||||||||    
T  3913455 ctcacaaatgaacaagacactcaatgattttcactcacccaaggtgt 3913409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 65 - 245
Target Start/End: Original strand, 52082790 - 52082957
Alignment:
Q  65 aaccctaatttctacc-actttctcaatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatag 163  Q
    ||||||| |||||||| | |||| |||||||||||||||||| |||| |||||||||||||||||| |||||||| ||| ||||||||||||||||| ||    
T  52082790 aaccctagtttctacccattttcccaatctcaccaatgaacaagacagtcaatgattttcactcacccaaggtgtttac-aatgtttcccaacccaagag 52082888  T
Q  164 aacctctcaaaagagcattaatcaaagactctcaaccctaaaattaccttatttgatttcctaactttctctctcttaaagc 245  Q
    || |||            ||||||||||| |||||||||||| ||||||  |||||||||| || |||||||||||| ||||    
T  52082889 aa-ctc------------taatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttcaagc 52082957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 68 - 166
Target Start/End: Complemental strand, 5871852 - 5871754
Alignment:
Q  68 cctaatttctaccactttctc-aatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaac 166  Q
    |||||||||||||  ||| || ||||||||||||||||| ||||||||||||||||||||||| |||||||| ||| ||||||||||||||||| |||||    
T  5871852 cctaatttctacccatttttccaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaacccaagagaac 5871754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 68 - 166
Target Start/End: Original strand, 13009567 - 13009665
Alignment:
Q  68 cctaatttctacc-actttctcaatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaac 166  Q
    ||||||||||||| | |||| ||||||||| |||||||| ||||||||||||||||||||||| |||||||| ||| ||||||||||||||||| |||||    
T  13009567 cctaatttctacccattttcacaatctcacaaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaacccaagagaac 13009665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 35662547 - 35662384
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctacc-actttctcaat 91  Q
    ||||||||||||||||||||||| ||||||  |||||||| ||| |||||||||||||| |||| |||      |||||||||||||| | ||| |||||    
T  35662547 ctatcaatgagttcttacaaagagatacaaatgagttacaagaaattagcttcaacaaa-ctcataaagaacaaccctaatttctacccattttttcaat 35662449  T
Q  92 ctcaccaatgaacatgacactcaatga-ttttcactcactcaaggtgtatacaaatgtttcccaac 156  Q
    |||||||||||||| ||||||| |||| ||||||| | |||||||||| ||||| |||||||||||    
T  35662448 ctcaccaatgaacaagacactc-atgatttttcacactctcaaggtgtttacaattgtttcccaac 35662384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 37740731 - 37740499
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctaccactttctc--aa 90  Q
    ||||||||||||||||||||||| ||||||  | |||||| ||| ||||||||||||| | |||||||      ||||||||| |||| |||| ||  ||    
T  37740731 ctatcaatgagttcttacaaagagatacaaatgggttacaagaaattagcttcaacaa-gttcacaaagaacaaccctaatttatacc-ctttttccaaa 37740634  T
Q  91 tctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaacctctcaaaagagcattaatcaaag 190  Q
    ||||||||||||||| |||||||| |||||||||||||| |||||||| ||| ||||||||||||||||| |||| |||            |||||||||    
T  37740633 tctcaccaatgaacaagacactcagtgattttcactcac-caaggtgtttac-aatgtttcccaacccaagagaa-ctc------------taatcaaag 37740549  T
Q  191 actctcaaccctaaaattaccttatttgatttcctaactttctctctctt 240  Q
    || |||||||||||| ||||||  |||||||||| || ||||||||||||    
T  37740548 accctcaaccctaaacttacctcctttgatttcccaagtttctctctctt 37740499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 5207904 - 5208078
Alignment:
Q  1 ctatcaatgagttcttacaaa--gatatacaagagttacacgaatttagcttcaacaaagctcacaa-------accctaatttctaccactttctcaat 91  Q
    |||||||||||||||||||||  |||||||||| ||| ||  || ||||||||||||| | ||||||       |||||||||||||||  |||  ||||    
T  5207904 ctatcaatgagttcttacaaatagatatacaagggttgcaataaattagcttcaacaa-gttcacaaagaacaaaccctaatttctaccctttttccaat 5208002  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaacc 167  Q
    | | |||||||||| | |||| |||||||||||||||| |||||||| |||||||||||||||| |||| ||||||    
T  5208003 cactccaatgaacaagtcactaaatgattttcactcacccaaggtgtttacaaatgtttcccaatccaagagaacc 5208078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 62 - 169
Target Start/End: Original strand, 6542310 - 6542418
Alignment:
Q  62 acaaaccctaatttctaccactttctc--aatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaaccca 159  Q
    ||||| |||||||||||||| ||| ||  |||||| |||||||||| |||||||||| |||||||||||| |||||||| ||| ||||||||||||||||    
T  6542310 acaaatcctaatttctaccattttttcccaatctccccaatgaacaagacactcaataattttcactcacccaaggtgtttac-aatgtttcccaaccca 6542408  T
Q  160 atagaacctc 169  Q
    | ||||||||    
T  6542409 agagaacctc 6542418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 65 - 166
Target Start/End: Original strand, 12739683 - 12739784
Alignment:
Q  65 aaccctaatttcta-ccactttctcaatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatag 163  Q
    |||||||||||||| ||| |||| |||||||||||||||||| ||||||||||||||| |||||||  ||||||| ||| ||||||||||||||||| ||    
T  12739683 aaccctaatttctatccattttcccaatctcaccaatgaacaagacactcaatgatttccactcacctaaggtgtttac-aatgtttcccaacccaagag 12739781  T
Q  164 aac 166  Q
    |||    
T  12739782 aac 12739784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 65 - 166
Target Start/End: Original strand, 12747889 - 12747990
Alignment:
Q  65 aaccctaatttcta-ccactttctcaatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatag 163  Q
    |||||||||||||| ||| |||| |||||||||||||||||| ||||||||||||||| |||||||  ||||||| ||| ||||||||||||||||| ||    
T  12747889 aaccctaatttctatccattttcccaatctcaccaatgaacaagacactcaatgatttccactcacctaaggtgtttac-aatgtttcccaacccaagag 12747987  T
Q  164 aac 166  Q
    |||    
T  12747988 aac 12747990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 65 - 166
Target Start/End: Original strand, 29999940 - 30000039
Alignment:
Q  65 aaccctaatttctaccactttctcaatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaataga 164  Q
    ||||||||||||||||  |||| |||||||||||||||||| ||||||||| ||||||||||||| |||||||| ||| ||||||||| ||||||| |||    
T  29999940 aaccctaatttctacccttttcccaatctcaccaatgaacaagacactcaacgattttcactcac-caaggtgtttac-aatgtttccaaacccaagaga 30000037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 2209820 - 2209657
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaaga---gttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctacc-actttctcaa 90  Q
    ||||||||||||||||||||||| |||||| |   |||||| ||| ||||||||||||| |||||||||      |||||||||||||| | |||| |||    
T  2209820 ctatcaatgagttcttacaaagagatacaaaatgggttacaagaaattagcttcaacaa-gctcacaaagaaaaaccctaatttctacccattttcccaa 2209722  T
Q  91 tctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaac 156  Q
    ||||| ||||||||| |||||||| |||||||||||| | |||||||| ||||| | |||||||||    
T  2209721 tctcaacaatgaacaagacactca-tgattttcactctcccaaggtgtttacaattatttcccaac 2209657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 6656062 - 6655900
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctacc-actttctcaat 91  Q
    ||||||||||||||||||||||| ||||||  |||||||| ||| ||||||||||||| | |||||||      || ||||||||||| | ||| |||||    
T  6656062 ctatcaatgagttcttacaaagagatacaaatgagttacaagaaattagcttcaacaa-gttcacaaagaacaaccttaatttctacccattttttcaat 6655964  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaac 156  Q
    ||||| | |||||| |||||||| |||||||||||| | |||||||| ||||| |||||||||||    
T  6655963 ctcacaagtgaacaagacactca-tgattttcactctcccaaggtgtttacaattgtttcccaac 6655900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 69 - 166
Target Start/End: Complemental strand, 29254525 - 29254428
Alignment:
Q  69 ctaatttctacc-actttctcaatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaac 166  Q
    |||||||||||| | |||| |||||||||||||||||| |||||||||||||||||| |||| ||| |||| ||| ||||||||||||||||| |||||    
T  29254525 ctaatttctacccaatttcccaatctcaccaatgaacaagacactcaatgattttcattcacccaatgtgtttac-aatgtttcccaacccaagagaac 29254428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 40632551 - 40632389
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaaga--gttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctacc-actttctcaat 91  Q
    ||||||||||||||||||||||| ||||||    |||||| ||| ||||||||||||| |||||||||      | |||||||||||| | |||| ||||    
T  40632551 ctatcaatgagttcttacaaagagatacaaataggttacaagaaattagcttcaacaa-gctcacaaagaacaactctaatttctacccattttcccaat 40632453  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaac 156  Q
    |||||||||||||| ||||||| ||||||||||||| | |||||||| ||||| |||||| ||||    
T  40632452 ctcaccaatgaacaagacactc-atgattttcactctcccaaggtgtttacaattgtttctcaac 40632389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 46703607 - 46703443
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaaga---gttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctac-cactttctcaa 90  Q
    |||| |||||||||||||||||| |||||| |   |||||| ||| ||||||| ||||| |||||||||      ||||||||||||| || |||| |||    
T  46703607 ctataaatgagttcttacaaagagatacaaaatgggttacaagaaattagcttaaacaa-gctcacaaagaacaaccctaatttctactcattttcccaa 46703509  T
Q  91 tctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaac 156  Q
    ||||||||||||||| ||||||||   |||||||||| | |||||||| ||||| |||||||||||    
T  46703508 tctcaccaatgaacaagacactcatgaattttcactctcccaaggtgtttacaattgtttcccaac 46703443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 62 - 173
Target Start/End: Complemental strand, 29056395 - 29056284
Alignment:
Q  62 acaaaccctaatttctaccactttctcaatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaat 161  Q
    |||||| |||||| |||||| |||| ||||||| | ||||||||  ||||||||||||||| |||||| |||||||| | ||||||||||||||| |||     
T  29056395 acaaactctaattcctaccattttcccaatctctctaatgaacaaaacactcaatgatttttactcacccaaggtgtttccaaatgtttcccaacacaag 29056296  T
Q  162 agaacctctcaa 173  Q
    | || |||||||    
T  29056295 ataatctctcaa 29056284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 65 - 152
Target Start/End: Original strand, 55085498 - 55085585
Alignment:
Q  65 aaccctaatttctaccactttctcaatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcc 152  Q
    |||| |||||||||||  |||  |||||||||||||||||| |||| |||||||||||||||||| |||||||| ||||| |||||||    
T  55085498 aaccttaatttctacctattttccaatctcaccaatgaacaagacagtcaatgattttcactcacccaaggtgtttacaattgtttcc 55085585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 8665514 - 8665351
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctacc-actttctcaat 91  Q
    ||||||||||||||||||||||| ||||||  | |||||| ||| ||||||||||||| |||| ||||      |||||||||||||| | |||| || |    
T  8665514 ctatcaatgagttcttacaaagagatacaaatgggttacaagaaattagcttcaacaa-gctctcaaagaacaaccctaatttctacccattttcccatt 8665416  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaac 156  Q
    |||||||||||||| ||||||||   ||||||||||   |||||||| ||||| |||||||||||    
T  8665415 ctcaccaatgaacaagacactcatgaattttcactcttccaaggtgtttacaattgtttcccaac 8665351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 12073498 - 12073336
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaac------cctaatttctacc-actttctcaat 91  Q
    ||||||||||||||||||||||| ||||||  ||||||||  || ||||||||||||| |||||||||       ||||||||||||| | |||| ||||    
T  12073498 ctatcaatgagttcttacaaagagatacaaatgagttacaataaattagcttcaacaa-gctcacaaagaacaaacctaatttctacccattttcccaat 12073400  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaac 156  Q
    ||||||||| | || |||||||| |||||||||| | | |||||||| ||||| |||||||||||    
T  12073399 ctcaccaataagcaagacactca-tgattttcacactcccaaggtgtttacaattgtttcccaac 12073336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 65 - 166
Target Start/End: Original strand, 12745569 - 12745670
Alignment:
Q  65 aaccctaatttctacc-actttctcaatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatag 163  Q
    |||||||||||||||| | ||||  |||||| |||||||||| ||||||||||||||||||||||| |||||||| ||| | |||||||||| |||| ||    
T  12745569 aaccctaatttctacccattttcctaatctcgccaatgaacaagacactcaatgattttcactcacccaaggtgtttac-attgtttcccaaaccaagag 12745667  T
Q  164 aac 166  Q
    |||    
T  12745668 aac 12745670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 2 - 167
Target Start/End: Original strand, 48142440 - 48142614
Alignment:
Q  2 tatcaatgagttctt-acaaaga--tatacaagagttacacgaatttagcttcaacaaagctcacaa-------accctaatttctaccactttctcaat 91  Q
    ||||||||||||||| |||||||  |||||||| |||||| |||  |||||||||||| ||||||||       ||||||||||||| ||  ||| ||||    
T  48142440 tatcaatgagttctttacaaagagatatacaagggttacaagaaactagcttcaacaa-gctcacaaagaacaaaccctaatttctatcatgttcccaat 48142538  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaacc 167  Q
    |||| |||||  || ||||||||||||||||||||||| | | |||| || |||||||||||||| ||| ||||||    
T  48142539 ctcatcaatgggcaagacactcaatgattttcactcacccgaagtgtttaaaaatgtttcccaactcaagagaacc 48142614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 65 - 166
Target Start/End: Original strand, 5370217 - 5370320
Alignment:
Q  65 aaccctaatttctaccactttct----caatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaa 160  Q
    |||||||||||||||| |||| |    |||||||||||||||||| ||||||||||||||||||||||| ||| |||| ||| ||||||||||| |||||    
T  5370217 aaccctaatttctacctcttttttttccaatctcaccaatgaacaagacactcaatgattttcactcac-caaagtgtttac-aatgtttcccagcccaa 5370314  T
Q  161 tagaac 166  Q
     |||||    
T  5370315 gagaac 5370320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 27417027 - 27417160
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctac-cactttctcaat 91  Q
    ||||||||||||| ||||||||| ||||||  | |||||| ||| ||||||||||||| |||||||||      ||||||||||||| || |||  ||||    
T  27417027 ctatcaatgagtttttacaaagagatacaaatgggttacaagaaattagcttcaacaa-gctcacaaagaacaaccctaatttctacacattttaccaat 27417125  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactc 127  Q
    |||||||||||||| ||||||| |||||||||||||    
T  27417126 ctcaccaatgaacaagacactc-atgattttcactc 27417160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 65 - 166
Target Start/End: Complemental strand, 53345251 - 53345150
Alignment:
Q  65 aaccctaatttctaccactttctcaatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaataga 164  Q
    |||| ||||||||| || |||||||||||| || || |||| |||||||||||||||||||||||| || ||||  |||||| |||| || ||||| |||    
T  53345251 aaccttaatttctatcattttctcaatctctccgataaacaagacactcaatgattttcactcacttaaagtgttaacaaatttttctcaccccaagaga 53345152  T
Q  165 ac 166  Q
    ||    
T  53345151 ac 53345150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 379486 - 379322
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaac------cctaatttctacc-actttctcaat 91  Q
    |||||||| |||||||||||||  ||||||  | |||||| ||| ||||||||||||| |||||||||       ||||||||||||| | |||||||||    
T  379486 ctatcaattagttcttacaaagcgatacaaatgggttacaagaaattagcttcaacaa-gctcacaaagaacaaacctaatttctacccattttctcaat 379388  T
Q  92 ctcaccaatgaacatgacactcaatga-ttttcactcactcaaggtgtatacaaatgtttcccaac 156  Q
    ||||| |||||||| || ||| | ||| ||||||||| | |||||||| ||||| |||||||||||    
T  379387 ctcacaaatgaacaagatactaattgaattttcactctcccaaggtgtttacaattgtttcccaac 379322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 156
Target Start/End: Complemental strand, 21688354 - 21688192
Alignment:
Q  2 tatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctaccacttt--ctcaat 91  Q
    ||||||||||||||| | |||| ||||||  ||||||||  || |||| |||||||| |||||||||      ||||||||||||||  |||  ||||||    
T  21688354 tatcaatgagttcttccgaagagatacaaatgagttacaaaaaattagtttcaacaa-gctcacaaagaacaaccctaatttctacccatttttctcaat 21688256  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaac 156  Q
    |||||| ||||||| ||||||| ||||||||||||| | |||||||| || || |||||||||||    
T  21688255 ctcaccgatgaacaagacactc-atgattttcactcccccaaggtgtttagaattgtttcccaac 21688192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 26364342 - 26364223
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcaca------aaccctaatttcta-ccactttctcaat 91  Q
    |||| |||||||||||||||||| ||||||  |||||||| ||| ||||||||||| ||| |||||      |||||||||||||| ||| |||| ||||    
T  26364342 ctattaatgagttcttacaaagagatacaaatgagttacaagaaattagcttcaac-aagttcacaaagaacaaccctaatttctacccattttcccaat 26364244  T
Q  92 ctcaccaatgaacatgacact 112  Q
    |||||||||||||| ||||||    
T  26364243 ctcaccaatgaacaagacact 26364223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 152
Target Start/End: Complemental strand, 8648244 - 8648086
Alignment:
Q  2 tatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaa------accctaatttcta-ccactttctcaatc 92  Q
    |||||||||||||||||||||| ||||||  | |||| | ||| |||||||||||||| |||||||      ||||||||||||| ||| |||| || ||    
T  8648244 tatcaatgagttcttacaaagagatacaaatgggttataagaaattagcttcaacaaa-ctcacaatgaacaaccctaatttctatccattttcccattc 8648146  T
Q  93 tcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcc 152  Q
    ||||||||||||| ||||||||   ||||||||||   |||||||| ||||  |||||||    
T  8648145 tcaccaatgaacaagacactcatgaattttcactcttccaaggtgtttacagttgtttcc 8648086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 186 - 270
Target Start/End: Complemental strand, 6677394 - 6677310
Alignment:
Q  186 caaagactctcaaccctaaaattaccttatttgatttcctaactttctctctcttaaagccttcaaaaaacatgaagaatgaagc 270  Q
    ||||||| |||||||||||| ||||||  ||||||  ||||| ||||||| |||| |||||| |  |||||||||||||||||||    
T  6677394 caaagacactcaaccctaaagttacctcctttgataccctaaatttctctttcttgaagcctactcaaaacatgaagaatgaagc 6677310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 88 - 156
Target Start/End: Complemental strand, 12119549 - 12119481
Alignment:
Q  88 caatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaac 156  Q
    |||||||||| ||||||| |||||||| |||||||||||| | |||||| | ||||| |||||||||||    
T  12119549 caatctcacctatgaacaagacactcattgattttcactctcccaaggtatttacaattgtttcccaac 12119481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 182 - 245
Target Start/End: Original strand, 52093901 - 52093964
Alignment:
Q  182 taatcaaagactctcaaccctaaaattaccttatttgatttcctaactttctctctcttaaagc 245  Q
    ||||||||||| |||||||||||| ||||||  |||||||||| || |||||||||||| ||||    
T  52093901 taatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttcaagc 52093964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 41639532 - 41639370
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctacc-actttctcaat 91  Q
    ||||| ||||||||||||||| | ||||||  | |||||| ||| |||||||||| |||| |||||||      |||||||||||||| | |||| ||||    
T  41639532 ctatcgatgagttcttacaaatagatacaaatgggttacaagaaattagcttcaa-aaagttcacaaagaacaaccctaatttctacccattttcccaat 41639434  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaac 156  Q
    || |||||| |||| |||||||  |||||||||||| |  ||||||| ||||| |||||||||||    
T  41639433 cttaccaataaacaagacactcg-tgattttcactctcctaaggtgtttacaattgtttcccaac 41639370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 107 - 160
Target Start/End: Original strand, 13992462 - 13992513
Alignment:
Q  107 gacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaa 160  Q
    ||||||||||||||||||||||| |||||||| ||| |||||||||||||||||    
T  13992462 gacactcaatgattttcactcac-caaggtgtttac-aatgtttcccaacccaa 13992513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 46147453 - 46147575
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcaca------aaccctaatttcta-ccactttctcaat 91  Q
    ||||||| ||||||||||||||| ||||||  |||||||| ||| ||||||||||| |||||||||      |||||||||||||| ||| |||  ||||    
T  46147453 ctatcaaagagttcttacaaagagatacaaatgagttacaagaaattagcttcaac-aagctcacaatgaacaaccctaatttctacccatttttccaat 46147551  T
Q  92 ctcaccaatgaacatgacactcaa 115  Q
    |||||| ||||||| |||| ||||    
T  46147552 ctcaccgatgaacaagacaatcaa 46147575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 245
Target Start/End: Original strand, 26175872 - 26175936
Alignment:
Q  181 ttaatcaaagactctcaaccctaaaattaccttatttgatttcctaactttctctctcttaaagc 245  Q
    |||||||||||| |||||| ||||| ||||||  |||||||||| || |||||||||||| ||||    
T  26175872 ttaatcaaagaccctcaactctaaagttacctcctttgatttcccaagtttctctctcttcaagc 26175936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 156
Target Start/End: Original strand, 26699598 - 26699670
Alignment:
Q  84 ttctcaatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaac 156  Q
    |||| |||||| | ||| |||| |||| |||||||||||||||||| ||| |||| ||||| |||||||||||    
T  26699598 ttctgaatctctctaataaacaagacattcaatgattttcactcacccaaagtgtttacaattgtttcccaac 26699670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 156
Target Start/End: Complemental strand, 41964450 - 41964358
Alignment:
Q  65 aaccctaatttctacc-actttctcaatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaac 156  Q
    |||||||||||||||| | |||| |||| ||||||| ||||| ||||||||   |||||||||  | |||||||| ||||| |||||||||||    
T  41964450 aaccctaatttctacccattttcccaatttcaccaacgaacaagacactcatgaattttcactttcccaaggtgtttacaattgtttcccaac 41964358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 50262763 - 50262829
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa 66  Q
    ||||||||||||||||||||||| ||||||  | |||||| ||| ||||||||||| |||||||||||    
T  50262763 ctatcaatgagttcttacaaagagatacaaatgggttacaagaaattagcttcaac-aagctcacaaa 50262829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 182 - 245
Target Start/End: Complemental strand, 5429610 - 5429547
Alignment:
Q  182 taatcaaagactctcaaccctaaaattaccttatttgatttcctaactttctctctcttaaagc 245  Q
    ||||||||||| |||||||||||| |||| |  |||||||||| || |||||||||||| ||||    
T  5429610 taatcaaagaccctcaaccctaaagttacttcctttgatttcccaagtttctctctcttcaagc 5429547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 182 - 245
Target Start/End: Original strand, 46147592 - 46147655
Alignment:
Q  182 taatcaaagactctcaaccctaaaattaccttatttgatttcctaactttctctctcttaaagc 245  Q
    ||||||||||| |||||||||||| ||||||  |||||||||| || ||| |||||||| ||||    
T  46147592 taatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttttctctcttgaagc 46147655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 182 - 245
Target Start/End: Original strand, 52095599 - 52095662
Alignment:
Q  182 taatcaaagactctcaaccctaaaattaccttatttgatttcctaactttctctctcttaaagc 245  Q
    ||||||||| | |||||||||||| ||||||  |||||||||| || |||||||||||| ||||    
T  52095599 taatcaaagtccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttcaagc 52095662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 182 - 245
Target Start/End: Original strand, 52467592 - 52467655
Alignment:
Q  182 taatcaaagactctcaaccctaaaattaccttatttgatttcctaactttctctctcttaaagc 245  Q
    ||||||||||| |||||||||||||||||||  ||||||| ||  | |||||||||||| ||||    
T  52467592 taatcaaagaccctcaaccctaaaattacctcctttgattaccctagtttctctctcttgaagc 52467655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 182 - 245
Target Start/End: Original strand, 56178873 - 56178936
Alignment:
Q  182 taatcaaagactctcaaccctaaaattaccttatttgatttcctaactttctctctcttaaagc 245  Q
    |||||||||||  ||||||||||| ||||||  |||||||||| || |||||||||||| ||||    
T  56178873 taatcaaagaccttcaaccctaaagttacctcctttgatttcccaagtttctctctcttcaagc 56178936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 100 - 166
Target Start/End: Complemental strand, 5349905 - 5349840
Alignment:
Q  100 tgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaac 166  Q
    |||||| ||||||||| |||||||| |||  |||||||| ||||||||||| ||||||||| |||||    
T  5349905 tgaacaagacactcaaagattttcaatcatccaaggtgtttacaaatgttt-ccaacccaaaagaac 5349840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 240
Target Start/End: Original strand, 12739787 - 12739845
Alignment:
Q  182 taatcaaagactctcaaccctaaaattaccttatttgatttcctaactttctctctctt 240  Q
    ||||||||||| |||||||||||| ||||||  |||||||||  || ||||||||||||    
T  12739787 taatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctctt 12739845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 240
Target Start/End: Original strand, 12747993 - 12748051
Alignment:
Q  182 taatcaaagactctcaaccctaaaattaccttatttgatttcctaactttctctctctt 240  Q
    ||||||||||| |||||||||||| ||||||  |||||||||  || ||||||||||||    
T  12747993 taatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttctctctctt 12748051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 269
Target Start/End: Original strand, 21704069 - 21704154
Alignment:
Q  186 caaagactctcaaccctaaaattaccttatttgatttcctaactttctctctcttaaagc--cttcaaaaaacatgaagaatgaag 269  Q
    |||||||| |||||| |||| |||||| ||||||||||  || |||||||||||| ||||  || || |||||||||| |||||||    
T  21704069 caaagactttcaaccttaaagttacctcatttgatttctcaagtttctctctcttgaagcctctacacaaaacatgaaaaatgaag 21704154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 99
Target Start/End: Complemental strand, 5136100 - 5136063
Alignment:
Q  62 acaaaccctaatttctaccactttctcaatctcaccaa 99  Q
    ||||||||||||||||||| ||||| ||||||||||||    
T  5136100 acaaaccctaatttctacccctttcccaatctcaccaa 5136063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 99
Target Start/End: Complemental strand, 5138325 - 5138288
Alignment:
Q  62 acaaaccctaatttctaccactttctcaatctcaccaa 99  Q
    ||||||||||||||||||| ||||| ||||||||||||    
T  5138325 acaaaccctaatttctacccctttcccaatctcaccaa 5138288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 99
Target Start/End: Complemental strand, 7122719 - 7122682
Alignment:
Q  62 acaaaccctaatttctaccactttctcaatctcaccaa 99  Q
    ||||||||||||||||||| ||||| ||||||||||||    
T  7122719 acaaaccctaatttctacccctttcccaatctcaccaa 7122682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 99
Target Start/End: Complemental strand, 7124938 - 7124901
Alignment:
Q  62 acaaaccctaatttctaccactttctcaatctcaccaa 99  Q
    ||||||||||||||||||| ||||| ||||||||||||    
T  7124938 acaaaccctaatttctacccctttcccaatctcaccaa 7124901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 238
Target Start/End: Complemental strand, 6376002 - 6375950
Alignment:
Q  186 caaagactctcaaccctaaaattaccttatttgatttcctaactttctctctc 238  Q
    ||||||| |||||||||||||||||||  |||||||||| ||  |||||||||    
T  6376002 caaagaccctcaaccctaaaattacctcctttgatttcccaagattctctctc 6375950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 238
Target Start/End: Original strand, 24334087 - 24334139
Alignment:
Q  186 caaagactctcaaccctaaaattaccttatttgatttcctaactttctctctc 238  Q
    |||||||||||||||||||| ||||||| ||||  |||| || ||||||||||    
T  24334087 caaagactctcaaccctaaagttaccttctttgtattcccaagtttctctctc 24334139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 270
Target Start/End: Original strand, 39594000 - 39594085
Alignment:
Q  184 atcaaagactctcaaccctaaaattaccttatttgatttcctaactttctctctcttaaagccttc-aaaaaacatgaagaatgaagc 270  Q
    ||||||||||| ||||| |||| |||||| ||||||||||| ||  |  |||||||| |||| ||| |||||| ||||||||||||||    
T  39594000 atcaaagactcccaaccttaaagttacctcatttgatttcccaaggt--tctctcttgaagctttctaaaaaaaatgaagaatgaagc 39594085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 65 - 156
Target Start/End: Complemental strand, 41639298 - 41639207
Alignment:
Q  65 aaccctaatttctacc-actttctcaatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaac 156  Q
    |||||||||||||||| | |||| |||||| |||||| |||| |||||||  |||||||||||| |  ||||||| ||||| |||| ||||||    
T  41639298 aaccctaatttctacccattttcccaatcttaccaataaacaagacactcg-tgattttcactctcctaaggtgtttacaattgttacccaac 41639207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 114708 - 114458
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaagag--ttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctaccacttt-ctcaat 91  Q
    ||||||||||||||||||||||| |||||| ||  ||||| ||| |||||||  |||| | |||||||      || |||||||||||  ||| | ||||    
T  114708 ctatcaatgagttcttacaaagagatacaaaagcgttacaagaaattagctttgacaa-gttcacaaagaacaaccttaatttctaccctttttcccaat 114610  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaacctctcaaaagagcattaatcaaaga 191  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||| ||||| ||||||||||||||| |||||| ||||| ||| |  ||||||||||    
T  114609 ctcaccaatgaacaagacactcaatgattttcactcac-caaggtgtttacaa-tgtttcccaacccaagagaacccctcaagagaaccctaatcaaaga 114512  T
Q  192 ctctcaaccctaaaattaccttatttgatttcctaactttctctctcttaaagc 245  Q
    | |||||||||||| ||||||  |||||||||  || |||||||||||| ||||    
T  114511 ccctcaaccctaaagttacctcctttgatttctcaagtttctctctcttcaagc 114458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 73; Significance: 2e-33; HSPs: 49)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 13239857 - 13239686
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctaccactttctc-aat 91  Q
    ||||||||||||||||||||||| ||||||  |||||||| ||| ||||||||||||| | |||||||      ||||||||||||||| ||| || |||    
T  13239857 ctatcaatgagttcttacaaagagatacaaaagagttacaagaaattagcttcaacaa-gttcacaaagaaaaaccctaatttctaccattttttccaat 13239759  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaac 166  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||| ||| ||||||||||||||||| |||||    
T  13239758 ctcaccaatgaacaagacactcaatgattttcactcac-caaggtgtttac-aatgtttcccaacccaagagaac 13239686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 39468611 - 39468783
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctacc-actttctcaat 91  Q
    ||||||||||||||||||||||| ||||||  | |||||| ||| ||||||||||||| | |||||||      |||||||||||||| | |||| ||||    
T  39468611 ctatcaatgagttcttacaaagagatacaaatgggttacaagaaattagcttcaacaa-gttcacaaagaacaaccctaatttctacccattttcccaat 39468709  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaac 166  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||| ||| ||||||||||||||||| |||||    
T  39468710 ctcactaatgaacaagacactcaatgattttcactcactcaaggtgtttac-aatgtttcccaacccaagagaac 39468783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 533875 - 533703
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctacc-actttctcaat 91  Q
    ||||||||||||||||||||||| ||||||  | ||||||  || ||||||||||||| |||||||||      |||||||||||||| | |||| ||||    
T  533875 ctatcaatgagttcttacaaagagatacaaatgggttacaaaaaattagcttcaacaa-gctcacaaagaccaaccctaatttctacccattttcccaat 533777  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaac 166  Q
    |||||||||||||| ||||| ||||||||||||||||| |||||||| ||| ||||||||||||||||| |||||    
T  533776 ctcaccaatgaacaagacacgcaatgattttcactcacccaaggtgtttac-aatgtttcccaacccaagagaac 533703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 4 - 247
Target Start/End: Original strand, 9049407 - 9049657
Alignment:
Q  4 tcaatgagttcttacaaagatatacaaga--gttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctaccactttctcaatctca 95  Q
    |||||||||||||||||||| |||||| |  |||||| ||| ||||||||||||| |||||||||      | |||||||||| || |||| ||| ||||    
T  9049407 tcaatgagttcttacaaagagatacaaaatggttacaagaaattagcttcaacaa-gctcacaaaaacaaacactaatttctatcattttcccaaactca 9049505  T
Q  96 ccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaacctctcaaaagagcattaatcaaagactct 195  Q
    | ||| |||| |||||||| ||||||| |||||| ||| |||| ||||||||||||||||  ||| ||||||||| ||||      |||||||||||| |    
T  9049506 ctaatcaacaagacactcagtgatttttactcacccaaagtgtttacaaatgtttcccaaatcaagagaacctctaaaaaataacctaatcaaagacttt 9049605  T
Q  196 caaccctaaaattaccttatttgatttcctaactttctctctcttaaagcct 247  Q
    |||||||||| ||| ||  |||||||||  || |||||||||||| ||||||    
T  9049606 caaccctaaagttatctcctttgatttctcaagtttctctctcttgaagcct 9049657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 42428492 - 42428664
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctacc-actttctcaat 91  Q
    ||||||||||||||||||||||| ||||||  | |||||| ||| ||||||||||||| | |||||||      || ||||||||||| | |||| ||||    
T  42428492 ctatcaatgagttcttacaaagagatacaaatgggttacaagaaattagcttcaacaa-gttcacaaagaaaaaccataatttctacccattttcccaat 42428590  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaac 166  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||| ||| ||| ||||||||||||| |||||    
T  42428591 ctcaccaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatatttcccaacccaagagaac 42428664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 62 - 245
Target Start/End: Original strand, 13695822 - 13696004
Alignment:
Q  62 acaaaccctaatttctaccactttctcaatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaat 161  Q
    |||||||||||||| ||||  |||| ||||||| |||| ||| | || |||||||||||||||||||| |||||||| ||||||||||| ||| | ||||    
T  13695822 acaaaccctaatttgtacccttttcccaatctctccaaagaaaaagatactcaatgattttcactcacacaaggtgtttacaaatgttttccagctcaat 13695921  T
Q  162 agaacctctcaaaagagcattaatcaaagactctcaaccctaaaattaccttatttgatttcctaactttctctctcttaaagc 245  Q
    | |||||||||| ||| |  | | ||||||| ||||||||||||  || ||| |||||||||  || |||||||||||||||||    
T  13695922 aaaacctctcaagagaac-ctcaccaaagacactcaaccctaaagctatcttctttgatttctcaagtttctctctcttaaagc 13696004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 25412866 - 25412696
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaagag--ttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctaccactttctcaatc 92  Q
    ||||||||||||||||||||||| |||||| ||  ||||| ||| |||||||  |||| | |||||||      ||||||||||||||  |||| |||||    
T  25412866 ctatcaatgagttcttacaaagagatacaaaagggttacaagaaattagctttgacaa-gttcacaaagaacaaccctaatttctacccttttcccaatc 25412768  T
Q  93 tcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaac 166  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||| ||| ||||||||||||||||| |||||    
T  25412767 tcaccaatgaacaagacactcaatgattttcactcac-caaggtgtttac-aatgtttcccaacccaagagaac 25412696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 13488309 - 13488076
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctacc-actttctcaat 91  Q
    ||||||||||||||||||||||| ||||||  | |||||| ||| ||||||||||||| | |||||||      |||||||||||||| | |||| ||||    
T  13488309 ctatcaatgagttcttacaaagagatacaaatgggttacaagaaattagcttcaacaa-gttcacaaagaacaaccctaatttctacccattttcccaat 13488211  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaacctctcaaaagagcattaatcaaaga 191  Q
    || ||||||||||| |||||||||| |||||||||||| |||||||| ||| ||||||| ||||||||| |||| |||            ||||||||||    
T  13488210 cttaccaatgaacaagacactcaataattttcactcacccaaggtgtttac-aatgttttccaacccaagagaa-ctc------------taatcaaaga 13488125  T
Q  192 ctctcaaccctaaaattaccttatttgatttcctaactttctctctctt 240  Q
    | |||||||||||| ||||||  |||||||||| || ||||||||||||    
T  13488124 ccctcaaccctaaagttacctcctttgatttcccaagtttctctctctt 13488076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 65 - 245
Target Start/End: Original strand, 28750788 - 28750955
Alignment:
Q  65 aaccctaatttctacc-actttctcaatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatag 163  Q
    |||||||||||||||| | |||| |||||||||||||||||| ||||||||||||||||||||||| |||||||| | | ||||||||||||||||| ||    
T  28750788 aaccctaatttctacccattttcccaatctcaccaatgaacaagacactcaatgattttcactcacccaaggtgttttc-aatgtttcccaacccaagag 28750886  T
Q  164 aacctctcaaaagagcattaatcaaagactctcaaccctaaaattaccttatttgatttcctaactttctctctcttaaagc 245  Q
    || |||            ||||||||||| |||||||||||| ||||||  |||||||||| || |||||||||||| ||||    
T  28750887 aa-ctc------------taatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttcaagc 28750955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 213571 - 213409
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctacc-actttctcaat 91  Q
    ||||||||||||||||||||||| ||||||  | |||||| ||| ||||||| ||||| |||||||||      |||||||||||||| | |||| ||||    
T  213571 ctatcaatgagttcttacaaagagatacaaatgggttacaagaaattagctttaacaa-gctcacaaagaacaaccctaatttctacccattttcccaat 213473  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaac 156  Q
    |||||||||||||| |||||||| |||||||||||| | |||||||| ||||| |||||||||||    
T  213472 ctcaccaatgaacaagacactca-tgattttcactctcccaaggtgtttacaattgtttcccaac 213409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 40147367 - 40147205
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctacc-actttctcaat 91  Q
    ||||||||||||||||||||||| ||||||  |||||||| ||| ||||||||||||| |||||| ||      |||||||||||||| | |||| ||||    
T  40147367 ctatcaatgagttcttacaaagagatacaaatgagttacaagaaattagcttcaacaa-gctcacgaagaacaaccctaatttctacccattttcccaat 40147269  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaac 156  Q
    |||||||||||||| ||||||| ||||||| ||||| | |||||||| ||||| |||||||||||    
T  40147268 ctcaccaatgaacaagacactc-atgatttccactctcccaaggtgtttacaattgtttcccaac 40147205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 42426297 - 42426458
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctacc-actttctcaat 91  Q
    ||||||||||||||||||||||| ||||||  | ||| || ||| |||||||||||||   |||||||      |||||||||||||| | |||||||||    
T  42426297 ctatcaatgagttcttacaaagagatacaaatgggttgcaagaaattagcttcaacaatt-tcacaaagaacaaccctaatttctacccattttctcaat 42426395  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaa 155  Q
    |||||||||||||| |||||||||| |||||||||||| |||||||| ||| ||||||||||||    
T  42426396 ctcaccaatgaacaagacactcaataattttcactcacccaaggtgtttac-aatgtttcccaa 42426458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 538131 - 537959
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctacc-actttctcaat 91  Q
    ||||||||||||||||||||||| ||||||  | |||||| ||| ||||||||||||| |||||||||      || ||||||||||| | |||| ||||    
T  538131 ctatcaatgagttcttacaaagagatacaaatgggttacaagaaattagcttcaacaa-gctcacaaagagcaaccttaatttctacccattttcccaat 538033  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaac 166  Q
    ||||| |||||||| ||||| ||||||||||||||||| |||||||| |||  ||||||||||| |||| |||||    
T  538032 ctcactaatgaacaagacacgcaatgattttcactcacccaaggtgtttac-gatgtttcccaagccaagagaac 537959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 245
Target Start/End: Original strand, 30682984 - 30683220
Alignment:
Q  1 ctatcaatgagt--tcttacaaagatatacaagag--ttacacgaatttagcttcaacaaagctcacaaa---ccctaatttctaccacttt-ctcaatc 92  Q
    ||||||||||||  ||||||||||| |||||| ||  ||||| ||| ||||||||||||| | |||||||   ||||||||||||||  ||| | |||||    
T  30682984 ctatcaatgagtattcttacaaagaaatacaaaagggttacaagaaattagcttcaacaa-gttcacaaagaaccctaatttctaccctttttcccaatc 30683082  T
Q  93 tcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaacctctcaaaagagcattaatcaaagac 192  Q
    |||| |||||||| ||||||||||||||||||||||| |||||||| ||| |||||||| |||||||| |||| |||            |||||||||||    
T  30683083 tcacaaatgaacaagacactcaatgattttcactcac-caaggtgtttac-aatgtttcgcaacccaagagaa-ctc------------taatcaaagac 30683167  T
Q  193 tctcaaccctaaaattaccttatttgatttcctaactttctctctcttaaagc 245  Q
     |||||||||||||||||||  | |||||||| || |||||||||||| ||||    
T  30683168 cctcaaccctaaaattacctcctctgatttcccaagtttctctctcttcaagc 30683220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 69 - 166
Target Start/End: Original strand, 5887553 - 5887650
Alignment:
Q  69 ctaatttcta-ccactttctcaatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaac 166  Q
    |||||||||| ||| |||||||||||||| |||||||| |||| |||||||||||||||||| |||||||| ||| ||||||||||||||||| |||||    
T  5887553 ctaatttctatccattttctcaatctcacaaatgaacaagacattcaatgattttcactcacccaaggtgtttac-aatgtttcccaacccaagagaac 5887650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 65 - 166
Target Start/End: Complemental strand, 30182623 - 30182523
Alignment:
Q  65 aaccctaatttctaccacttt-ctcaatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatag 163  Q
    ||||||||||||||||| ||| | |||||||||||||||||| ||||||||||||||||||||||| |||||||| | | ||||||||||||||||| ||    
T  30182623 aaccctaatttctaccatttttcccaatctcaccaatgaacaagacactcaatgattttcactcac-caaggtgtttgc-aatgtttcccaacccaagag 30182526  T
Q  164 aac 166  Q
    |||    
T  30182525 aac 30182523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 8566008 - 8566180
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaac------cctaatttctacc-actttctcaat 91  Q
    ||||||||||||||||||| ||  ||||||  | |||||| ||| ||||||| ||||| |||||||||       ||||| ||||||| | |||||||||    
T  8566008 ctatcaatgagttcttacagagggatacaaatgggttacaagaaattagcttaaacaa-gctcacaaagaacaaacctaagttctacccattttctcaat 8566106  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaac 166  Q
    ||||| |||||||| ||||||||||||||||||||||| |||||||| ||| ||||||||| ||||||| |||||    
T  8566107 ctcacaaatgaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttccgaacccaagagaac 8566180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 65 - 166
Target Start/End: Complemental strand, 13343096 - 13342995
Alignment:
Q  65 aaccctaatttctaccactttctc--aatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaata 162  Q
    ||||||||||||||||  ||| ||  ||||||||||||||||| ||||||||||||||||||||||| |||||||| ||| ||||||||||||||||| |    
T  13343096 aaccctaatttctacccttttttcccaatctcaccaatgaacaagacactcaatgattttcactcac-caaggtgtttac-aatgtttcccaacccaaga 13342999  T
Q  163 gaac 166  Q
    ||||    
T  13342998 gaac 13342995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 33831786 - 33831614
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaac------cctaatttctaccactttctc-aat 91  Q
    ||||||||||||||||||||||| ||||||  | |||||| ||| ||||||| ||||| |||||||||       |||||||||||||  ||| || |||    
T  33831786 ctatcaatgagttcttacaaagagatacaaatgggttacaagaaattagcttaaacaa-gctcacaaagaacaaacctaatttctacccatttttccaat 33831688  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaac 166  Q
    ||||| |||||| | ||||||||||||||||||||||| |||||||| ||| ||||||| ||||||||| |||||    
T  33831687 ctcacaaatgaataagacactcaatgattttcactcacccaaggtgtttac-aatgttttccaacccaagagaac 33831614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 62 - 156
Target Start/End: Original strand, 16641068 - 16641165
Alignment:
Q  62 acaaaccctaatttctaccacttt---ctcaatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaac 156  Q
    |||||| ||||||||||||| |||   ||||||||| |||||||||| |||||| ||||| ||||||||||||||||||| |||||||||| ||||||    
T  16641068 acaaacactaatttctaccatttttttctcaatctcgccaatgaacaagacacttaatgaatttcactcactcaaggtgtttacaaatgttccccaac 16641165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 83 - 166
Target Start/End: Original strand, 36074197 - 36074278
Alignment:
Q  83 tttctcaatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaac 166  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||| |||||||| ||| ||||||||||||||||| |||||    
T  36074197 tttcccaatctcaccaatgaacaagacactcaatgattttcactcac-caaggtgtttac-aatgtttcccaacccaagagaac 36074278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 5058151 - 5057991
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcaca----aaccctaatttctacc-actttctcaatct 93  Q
    ||||||||||||||||||||||| ||||||  | | |||| |||  |||||||||||| |||||||    |||||||||||||||| | |||| ||||||    
T  5058151 ctatcaatgagttcttacaaagagatacaaatgggatacaagaaaatagcttcaacaa-gctcacagaacaaccctaatttctacccattttcccaatct 5058053  T
Q  94 caccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaac 156  Q
    |||||||||||| ||||||| |||||||||||||   |||||||| ||||| ||||| |||||    
T  5058052 caccaatgaacaagacactc-atgattttcactcttccaaggtgtttacaattgttttccaac 5057991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 28278422 - 28278260
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctacc-actttctcaat 91  Q
    ||||||||||||| ||||||||| ||||||  | |||||| ||| ||||||||||||| |||||||||      || ||||||||||| | |||| ||||    
T  28278422 ctatcaatgagtttttacaaagagatacaaatgggttacaagaaattagcttcaacaa-gctcacaaagaacaaccataatttctacccattttcccaat 28278324  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaac 156  Q
    |||||||||||||| ||||||| ||||||||||||| | ||| |||| ||||| |||||||||||    
T  28278323 ctcaccaatgaacaagacactc-atgattttcactctcccaatgtgtttacaattgtttcccaac 28278260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 68 - 166
Target Start/End: Complemental strand, 31183004 - 31182907
Alignment:
Q  68 cctaatttctaccactttctcaatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaac 166  Q
    |||||||||||||  |||  ||||||||| |||||||| |||||||||||||||||||||||  ||||||| ||| ||||||||||||||||| |||||    
T  31183004 cctaatttctacccattttccaatctcacaaatgaacaagacactcaatgattttcactcacctaaggtgtttac-aatgtttcccaacccaagagaac 31182907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 68 - 166
Target Start/End: Original strand, 3075794 - 3075892
Alignment:
Q  68 cctaatttctacc-actttctcaatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaac 166  Q
    ||||||||||||| | |||||||||||||| |||||||  ||||||||||||||||||||||   ||||||| ||| ||||||||||||||||| |||||    
T  3075794 cctaatttctacctattttctcaatctcacaaatgaacgagacactcaatgattttcactcatcaaaggtgtttac-aatgtttcccaacccaagagaac 3075892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 68 - 166
Target Start/End: Complemental strand, 19806415 - 19806318
Alignment:
Q  68 cctaatttctaccactttctc-aatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaac 166  Q
    |||||||||||||  ||| || ||||||||||||||||| |||||||||||| |||||||||| |||||||| ||| ||||||||||||||||| |||||    
T  19806415 cctaatttctacccatttttccaatctcaccaatgaacaagacactcaatga-tttcactcacccaaggtgtttac-aatgtttcccaacccaagagaac 19806318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 65 - 166
Target Start/End: Complemental strand, 32636859 - 32636758
Alignment:
Q  65 aaccctaatttctacc-actttctcaatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatag 163  Q
    |||| ||||||||||| | |||| |||||||||||||||| | ||||||||||||||||||||||| |||||||| ||| |||||||| | |||||| ||    
T  32636859 aaccataatttctacccattttcccaatctcaccaatgaataagacactcaatgattttcactcacccaaggtgtttac-aatgtttcactacccaagag 32636761  T
Q  164 aac 166  Q
    |||    
T  32636760 aac 32636758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 88 - 166
Target Start/End: Complemental strand, 42926904 - 42926827
Alignment:
Q  88 caatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaac 166  Q
    |||||||||||| ||||| ||||||||||||||||||||||| |||||||| ||| |||||||||||| |||| |||||    
T  42926904 caatctcaccaaagaacaagacactcaatgattttcactcacccaaggtgtttac-aatgtttcccaatccaagagaac 42926827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 42309997 - 42310170
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaac------cctaatttctacc-actttctcaat 91  Q
    |||||||| |||||||||||||| ||||||  |||||||| ||| ||||||||||||| |||||||||       | | ||||||||| | |||||||||    
T  42309997 ctatcaataagttcttacaaagagatacaaaagagttacaagaaattagcttcaacaa-gctcacaaagatcaaacttgatttctacccaatttctcaat 42310095  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaacc 167  Q
    ||||||||||| || |||||||||||||||||||| || |||  ||| ||| ||||||| |||||| || ||||||    
T  42310096 ctcaccaatgagcaagacactcaatgattttcacttacccaaaatgtttac-aatgttttccaaccaaagagaacc 42310170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 38747111 - 38746949
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctacc-actttctcaat 91  Q
    ||||||||||||| || |||||| ||||||  | |||||| ||| ||||||||||||| |||||||||      |||||||||||||| | |||| ||||    
T  38747111 ctatcaatgagtttttccaaagagatacaaatgggttacaagaaattagcttcaacaa-gctcacaaagaacaaccctaatttctacccattttcccaat 38747013  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaac 156  Q
    ||||  |||||||| || ||||| |||||||||||| | |||||||| ||||| |||||||||||    
T  38747012 ctcattaatgaacaagatactca-tgattttcactctcccaaggtgtttacaattgtttcccaac 38746949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 88 - 169
Target Start/End: Complemental strand, 37439144 - 37439065
Alignment:
Q  88 caatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaacctc 169  Q
    |||||||||||||||| | ||||||||||||||||||||||| ||| |||| ||| ||||||||||||||||| ||| ||||    
T  37439144 caatctcaccaatgaataagacactcaatgattttcactcac-caaagtgtttac-aatgtttcccaacccaagagaccctc 37439065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 65 - 156
Target Start/End: Original strand, 27637746 - 27637838
Alignment:
Q  65 aaccctaatttctacc-actttctcaatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaac 156  Q
    |||||||||||||||| | ||||||||||||||||||||||| ||||||||   ||||||||||   ||||||||  |||| |||||||||||    
T  27637746 aaccctaatttctacccattttctcaatctcaccaatgaacaagacactcatgaattttcactcttccaaggtgttcacaattgtttcccaac 27637838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 186 - 273
Target Start/End: Complemental strand, 3325840 - 3325752
Alignment:
Q  186 caaagactctcaaccctaaaattaccttatttgatttcctaactttctctctcttaaagc-cttcaaaaaacatgaagaatgaagcatt 273  Q
    ||||||| ||| |||||||||||||  | |||||||||| || ||||||||||||||||| || |  |||||||||| |||||||||||    
T  3325840 caaagacactcgaccctaaaattactctttttgatttcccaattttctctctcttaaagctctacctaaaacatgaaaaatgaagcatt 3325752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 16452186 - 16452015
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaac------cctaatttctaccactttctc-aat 91  Q
    |||| |||||||||||||||||| ||||||  | |||||| ||| ||||||||||||| ||||| |||       | |||||||||||  ||| || |||    
T  16452186 ctatgaatgagttcttacaaagagatacaaatgggttacaagaaattagcttcaacaa-gctcagaaagaacaaacttaatttctacccatttttccaat 16452088  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaac 166  Q
    |||| ||||||||| |||||||||||||| ||||| || |||||||| ||| ||||||||| ||||||| |||||    
T  16452087 ctcatcaatgaacaagacactcaatgattgtcacttac-caaggtgtttac-aatgtttccgaacccaagagaac 16452015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 156
Target Start/End: Complemental strand, 27015566 - 27015476
Alignment:
Q  65 aaccctaatttctacc-actttctcaatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaac 156  Q
    |||||||||||||||| | |||| ||||||||||||||| ||  ||||||| |||||||||||| | |||| ||| ||||| |||||||||||    
T  27015566 aaccctaatttctacctattttcccaatctcaccaatgaccaa-acactca-tgattttcactctcccaagatgtttacaattgtttcccaac 27015476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 107 - 170
Target Start/End: Complemental strand, 16409474 - 16409413
Alignment:
Q  107 gacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaacctct 170  Q
    ||||||||||||||||||||||| |||||||| |||  |||||||||||||||| |||| ||||    
T  16409474 gacactcaatgattttcactcac-caaggtgtttac-catgtttcccaacccaagagaagctct 16409413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 107 - 170
Target Start/End: Complemental strand, 26177882 - 26177821
Alignment:
Q  107 gacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaacctct 170  Q
    ||||||||||||||||||||||| |||||||| |||  |||||||||||||||| |||| ||||    
T  26177882 gacactcaatgattttcactcac-caaggtgtttac-catgtttcccaacccaagagaagctct 26177821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 182 - 245
Target Start/End: Original strand, 39468786 - 39468849
Alignment:
Q  182 taatcaaagactctcaaccctaaaattaccttatttgatttcctaactttctctctcttaaagc 245  Q
    |||| |||||| |||||||||||| ||||||  |||||||||| || |||||||||||| ||||    
T  39468786 taatgaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttcaagc 39468849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 182 - 237
Target Start/End: Original strand, 42426472 - 42426527
Alignment:
Q  182 taatcaaagactctcaaccctaaaattaccttatttgatttcctaactttctctct 237  Q
    ||||||||||| |||||||||||| ||||||  |||||||||| || |||||||||    
T  42426472 taatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctct 42426527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 240
Target Start/End: Complemental strand, 533700 - 533642
Alignment:
Q  182 taatcaaagactctcaaccctaaaattaccttatttgatttcctaactttctctctctt 240  Q
    ||||||||||| | |||||||||| ||||||  |||||||||| || ||||||||||||    
T  533700 taatcaaagacccccaaccctaaagttacctcctttgatttcccaaatttctctctctt 533642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 240
Target Start/End: Complemental strand, 13239683 - 13239625
Alignment:
Q  182 taatcaaagactctcaaccctaaaattaccttatttgatttcctaactttctctctctt 240  Q
    ||||||||||| ||||||| |||| ||||||  |||||||| |||| ||||||||||||    
T  13239683 taatcaaagaccctcaaccataaagttacctcctttgattttctaagtttctctctctt 13239625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 107 - 165
Target Start/End: Complemental strand, 26170773 - 26170717
Alignment:
Q  107 gacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaa 165  Q
    ||||||||||||||||||||||| |||||||| |||  |||||||||||||||| ||||    
T  26170773 gacactcaatgattttcactcac-caaggtgtttac-catgtttcccaacccaagagaa 26170717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 99
Target Start/End: Complemental strand, 16544444 - 16544407
Alignment:
Q  62 acaaaccctaatttctaccactttctcaatctcaccaa 99  Q
    ||||||||||||||||||| ||||| ||||||||||||    
T  16544444 acaaaccctaatttctacccctttcccaatctcaccaa 16544407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 99
Target Start/End: Complemental strand, 25078157 - 25078120
Alignment:
Q  62 acaaaccctaatttctaccactttctcaatctcaccaa 99  Q
    ||||||||||||||||||| ||||| ||||||||||||    
T  25078157 acaaaccctaatttctacccctttcccaatctcaccaa 25078120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 99
Target Start/End: Complemental strand, 25136126 - 25136089
Alignment:
Q  62 acaaaccctaatttctaccactttctcaatctcaccaa 99  Q
    ||||||||||||||||||| ||||| ||||||||||||    
T  25136126 acaaaccctaatttctacccctttcccaatctcaccaa 25136089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 99
Target Start/End: Complemental strand, 40380127 - 40380090
Alignment:
Q  62 acaaaccctaatttctaccactttctcaatctcaccaa 99  Q
    ||||||||||||||||||| ||||| ||||||||||||    
T  40380127 acaaaccctaatttctacccctttcccaatctcaccaa 40380090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 42926968 - 42926916
Alignment:
Q  6 aatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaa 56  Q
    |||||||||||||||||| ||||||  |||||||| ||| |||||||||||||    
T  42926968 aatgagttcttacaaagagatacaaatgagttacaagaaattagcttcaacaa 42926916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 246
Target Start/End: Complemental strand, 5007470 - 5007418
Alignment:
Q  194 ctcaaccctaaaattaccttatttgatttcctaactttctctctcttaaagcc 246  Q
    |||||||||||| ||||||  |||||||| |||| ||| ||||||||||||||    
T  5007470 ctcaaccctaaagttacctcctttgattttctaagtttttctctcttaaagcc 5007418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 245
Target Start/End: Complemental strand, 37439072 - 37439016
Alignment:
Q  189 agactctcaaccctaaaattaccttatttgatttcctaactttctctctcttaaagc 245  Q
    |||| |||||||||||| |||||| ||||||||| | || |||||||||||| ||||    
T  37439072 agaccctcaaccctaaagttacctcatttgattttccaagtttctctctcttcaagc 37439016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 59; Significance: 6e-25; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 11663 - 11502
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctaccacttt-ctcaat 91  Q
    ||||||||||||||||||||||| ||||||  |||||||| ||| |||||||  |||| | |||||||      ||||||||||||||| ||| | ||||    
T  11663 ctatcaatgagttcttacaaagagatacaaatgagttacaagaaattagctttgacaa-gttcacaaagaacaaccctaatttctaccatttttcccaat 11565  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaac 156  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||| ||| |||||||||||||    
T  11564 ctcaccaatgaacaagacactcaatgattttcactcac-caaggtgtttac-aatgtttcccaac 11502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0466 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 7433 - 7275
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctaccactttctc-aat 91  Q
    ||||||||||||||||||||||| ||||||  | |||||| ||| ||||||||||||| |||||||||      || |||||||||||  ||| || |||    
T  7433 ctatcaatgagttcttacaaagagatacaaatgggttacaagaaattagcttcaacaa-gctcacaaagaacaaccttaatttctacccatttttccaat 7335  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcc 152  Q
    |||||||||||||| ||||||| ||||||||||||| | |||||||| ||||| |||||||    
T  7334 ctcaccaatgaacaagacactc-atgattttcactctcccaaggtgtttacaattgtttcc 7275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1519 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 65 - 166
Target Start/End: Complemental strand, 951 - 851
Alignment:
Q  65 aaccctaatttctaccactttctc--aatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaata 162  Q
    ||||||||||||||||  ||| ||  ||||||||||| ||||| ||||||||||||||||||||||| |||||||| ||| ||||||||||||||||| |    
T  951 aaccctaatttctacccttttttcccaatctcaccaa-gaacaagacactcaatgattttcactcac-caaggtgtttac-aatgtttcccaacccaaga 855  T
Q  163 gaac 166  Q
    ||||    
T  854 gaac 851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 65 - 170
Target Start/End: Original strand, 11295 - 11399
Alignment:
Q  65 aaccctaatttctaccactttctc--aatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaata 162  Q
    ||||||||||||||||  ||||||  ||||||||||| ||||| ||||||||||||||| ||||||| |||||||| ||| ||||||||||||||||| |    
T  11295 aaccctaatttctacccttttctcccaatctcaccaa-gaacaagacactcaatgatttacactcac-caaggtgtttac-aatgtttcccaacccaaga 11391  T
Q  163 gaacctct 170  Q
    ||| ||||    
T  11392 gaagctct 11399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 65 - 170
Target Start/End: Original strand, 8869 - 8973
Alignment:
Q  65 aaccctaatttctaccactttctc--aatctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaata 162  Q
    ||||||||||||||||  ||||||  ||||||||||| ||||| ||||||||||| ||| ||||||| |||||| | ||||| ||||||||||||||| |    
T  8869 aaccctaatttctacccttttctcccaatctcaccaa-gaacaagacactcaatggtttacactcac-caaggtctttacaa-tgtttcccaacccaaga 8965  T
Q  163 gaacctct 170  Q
    ||| ||||    
T  8966 gaagctct 8973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 18066 - 18223
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaa------accctaatttctaccacttt-ctcaat 91  Q
    ||||||||||||| ||||||||| ||||||  |||||||| ||| ||||||||||||| ||||||||      |||||||||||||||| ||| | || |    
T  18066 ctatcaatgagtt-ttacaaagagatacaaatgagttacaagaaattagcttcaacaa-gctcacaatgaacaaccctaatttctaccaattttcccact 18163  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcc 152  Q
    ||||||||||||||  ||||||| |||||||||||| | ||| |||| ||||| |||||||    
T  18164 ctcaccaatgaacaaaacactca-tgattttcactctcccaaagtgtttacaattgtttcc 18223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 434639 - 434467
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaagag--ttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctaccacttt--ctcaa 90  Q
    ||||||||||||||||||||||| |||||| ||  ||||| ||| |||||||  |||| | |||||||      ||||||||||||||  |||  | |||    
T  434639 ctatcaatgagttcttacaaagagatacaaaagggttacaagaaattagctttgacaa-gttcacaaagaacaaccctaatttctaccctttttccccaa 434541  T
Q  91 tctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaac 166  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||| | |||  |||||| ||||||||| |||||    
T  434540 tctcaccaatgaacaagacactcaatgattttcactcac-caaggtatttac-catgttttccaacccaagagaac 434467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 2)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 2 - 160
Target Start/End: Original strand, 20478 - 20643
Alignment:
Q  2 tatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaac------cctaatttctac-cactttctcaatc 92  Q
    |||||| ||||||||||||||| ||||||  | |||||| ||| ||||||||||||| | |||||||       |||||||||| | || |||| |||||    
T  20478 tatcaaagagttcttacaaagagatacaaatgggttacaagaaattagcttcaacaa-gttcacaaaaaacaaacctaatttctgctcattttcccaatc 20576  T
Q  93 tcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaa 160  Q
    ||||||||||| |  | |||||||||||||||||||| |||||||| ||| ||||| |||||||||||    
T  20577 tcaccaatgaataataaactcaatgattttcactcacccaaggtgtttac-aatgtctcccaacccaa 20643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 182 - 240
Target Start/End: Original strand, 20652 - 20710
Alignment:
Q  182 taatcaaagactctcaaccctaaaattaccttatttgatttcctaactttctctctctt 240  Q
    ||||||||||| |||||||||||| ||||||  |||||||||| || ||||||||||||    
T  20652 taatcaaagaccctcaaccctaaagttacctcctttgatttccaaagtttctctctctt 20710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 149159 - 149331
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttcta-ccactttctcaat 91  Q
    ||||||||||||||||||||||| ||| ||  | || ||| ||| ||||||||||||| ||| |||||      |||||||||||| ||  |||| ||||    
T  149159 ctatcaatgagttcttacaaagagatataaatgggtaacaagaaattagcttcaacaa-gcttacaaaaaacaaccctaatttctatccgttttcccaat 149257  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaac 166  Q
    ||||| |||||||| ||||||||||||||||||||  | |||||||| ||| |||||||| ||||| || |||||    
T  149258 ctcacaaatgaacaagacactcaatgattttcactaccccaaggtgtttac-aatgtttctcaacctaagagaac 149331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 109 - 167
Target Start/End: Original strand, 19117 - 19174
Alignment:
Q  109 cactcaatgattttcactcactcaaggtgtatacaaatgtttcccaacccaatagaacc 167  Q
    ||||||||||||||||||||| |||| ||| ||||||||||||||||||||| ||||||    
T  19117 cactcaatgattttcactcacccaag-tgtttacaaatgtttcccaacccaagagaacc 19174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 80345 - 80503
Alignment:
Q  1 ctatcaatgagttcttacaaagatatacaa--gagttacacgaatttagcttcaacaaagctcacaaa------ccctaatttctacc-actttctcaat 91  Q
    ||||| ||||||||||||||| | ||||||  | ||| || ||| ||||||||||||| |||||||||      |||||||||||||| | |||| ||||    
T  80345 ctatctatgagttcttacaaaaagatacaaatgggttgcaagaaattagcttcaacaa-gctcacaaagaacaaccctaatttctacccattttcccaat 80443  T
Q  92 ctcaccaatgaacatgacactcaatgattttcactcactcaaggtgtatacaaatgtttcc 152  Q
    |||| ||||||||| |||||||| |||||||||||| | ||||||||  |||| |||||||    
T  80444 ctcagcaatgaacaagacactca-tgattttcactctcccaaggtgttcacaattgtttcc 80503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 268
Target Start/End: Original strand, 27632 - 27781
Alignment:
Q  120 tttcactcactcaaggtgtatacaaatgtttcccaacccaatagaacctctcaaaagagcattaatcaaagactctcaaccctaaaattaccttatttga 219  Q
    |||||||||  |||||||| ||||||||||||||||| ||| ||||||||||||  || |  | |  |||||||||||  | | || ||||||  |||||    
T  27632 tttcactcatccaaggtgtttacaaatgtttcccaactcaagagaacctctcaagtgaaccctcactaaagactctcattcttgaagttacctcctttga 27731  T
Q  220 tttcctaactttctctctcttaaagcct-tcaaaaaacatgaagaatgaa 268  Q
    ||||| || ||| || ||||| ||||||  ||||||||||||||||||||    
T  27732 tttcccaagtttttcgctcttgaagcctcacaaaaaacatgaagaatgaa 27781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 99
Target Start/End: Original strand, 3858 - 3895
Alignment:
Q  62 acaaaccctaatttctaccactttctcaatctcaccaa 99  Q
    ||||||||||||||||||| ||||| ||||||||||||    
T  3858 acaaaccctaatttctacccctttcccaatctcaccaa 3895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 99
Target Start/End: Original strand, 2736 - 2773
Alignment:
Q  62 acaaaccctaatttctaccactttctcaatctcaccaa 99  Q
    ||||||||||||||||||| ||||| ||||||||||||    
T  2736 acaaaccctaatttctacccctttcccaatctcaccaa 2773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 99
Target Start/End: Complemental strand, 6309 - 6272
Alignment:
Q  62 acaaaccctaatttctaccactttctcaatctcaccaa 99  Q
    ||||||||||||||||||| ||||| ||||||||||||    
T  6309 acaaaccctaatttctacccctttcccaatctcaccaa 6272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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