View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10080_low_75 (Length: 235)
Name: NF10080_low_75
Description: NF10080
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10080_low_75 |
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Alignment Details
Target: chr3 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 50388383 - 50388167
Alignment:
| Q |
1 |
atgaaagcataaccaggaggcctccttgcaacccacacactacacagacaaaattcacaaaattaaattatgatctaatcaaaataattataaagtataa |
100 |
Q |
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| T |
50388383 |
atgaaagcataaccaggaggcctccttgcaacccacacactacacagacaaaattcacaaaattaaattatgatctaatcaaaataattataaagtataa |
50388284 |
T |
|
| Q |
101 |
atgatagtttaacaggaagttacattaatttaatttgaatataattttcaagctgacaattcaaaaatccaattgggaagtatgaaattacttgttgacc |
200 |
Q |
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| T |
50388283 |
atgatagtttaacaggaagttacattaatttaatttgaatataattttcaagctgacaattcaaaaatccaattgggaagtatgaaattacttgttgacc |
50388184 |
T |
|
| Q |
201 |
taattcactgtaatgcg |
217 |
Q |
| |
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||||||||||||||||| |
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| T |
50388183 |
taattcactgtaatgcg |
50388167 |
T |
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