View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10080_low_80 (Length: 216)
Name: NF10080_low_80
Description: NF10080
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10080_low_80 |
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Alignment Details
Target: chr5 (Bit Score: 180; Significance: 2e-97; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 180; E-Value: 2e-97
Query Start/End: Original strand, 15 - 198
Target Start/End: Original strand, 12231083 - 12231266
Alignment:
| Q |
15 |
cataggattaacataataagactataaacttactgcacttttatagttaaggtacaattcttccatcccttcagcaatagtggggggcaaagttccggct |
114 |
Q |
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| T |
12231083 |
cataggattaacataataagactataaacttactgcacttttatagttaaggtacaattcttccatcccttcagcaatagtggggggcaaagttccggct |
12231182 |
T |
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| Q |
115 |
tctacttccttcttaattccagaaagaacatctgcaaacaaacaaatcaatatgacaaaaaattaacactaataatactaatca |
198 |
Q |
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| T |
12231183 |
tctacttccttcttaattccagaaagaacatctgcaaacaaacaaatcaatgtgacaaaaaattaacactaataatactaatca |
12231266 |
T |
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