View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10081_high_7 (Length: 224)
Name: NF10081_high_7
Description: NF10081
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10081_high_7 |
 | |
|
Alignment Details
Target: chr8 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 14 - 206
Target Start/End: Original strand, 26275632 - 26275824
Alignment:
| Q |
14 |
aatttttcctttataaatgccagctcagatataggtcaaacagatgtgataatttggcatccagcatagcagatttagaagcttgaattatgttgaagct |
113 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26275632 |
aatttttcctttataaatgccagctcagatataggtcaaacagatgtgataatttggcatccagcatagcagatttagaagcttgaattatgttgaagct |
26275731 |
T |
|
| Q |
114 |
acagcctacttccacaataacactccgaaacagatgttccatcgaatgcgcattattattgaaatatctatcattacgttctatccaagtcct |
206 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26275732 |
acagcctacttccacaataacactccgaaacagatgttccatcgaatgcgcattattattgaaatatctatcattacgttctatccaagtcct |
26275824 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University