View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10081_low_11 (Length: 239)

Name: NF10081_low_11
Description: NF10081
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10081_low_11
NF10081_low_11
[»] chr6 (62 HSPs)
chr6 (15-221)||(26884094-26884300)
chr6 (28-221)||(27611065-27611258)
chr6 (28-221)||(27698557-27698750)
chr6 (37-209)||(27229175-27229347)
chr6 (28-212)||(27718442-27718626)
chr6 (28-221)||(27724908-27725101)
chr6 (28-209)||(25579662-25579843)
chr6 (28-221)||(26646410-26646603)
chr6 (28-209)||(26655932-26656113)
chr6 (28-221)||(26752378-26752571)
chr6 (28-209)||(26761903-26762084)
chr6 (28-221)||(27593083-27593276)
chr6 (28-221)||(27678877-27679070)
chr6 (28-209)||(26142808-26142989)
chr6 (28-209)||(26802385-26802566)
chr6 (28-209)||(25481685-25481866)
chr6 (28-221)||(27531260-27531453)
chr6 (28-221)||(26622907-26623100)
chr6 (28-221)||(26728885-26729078)
chr6 (28-221)||(31284219-31284412)
chr6 (31-209)||(25538483-25538661)
chr6 (28-209)||(26055869-26056050)
chr6 (28-209)||(26075839-26076020)
chr6 (28-209)||(27338128-27338309)
chr6 (28-209)||(27398868-27399049)
chr6 (28-221)||(27677677-27677870)
chr6 (28-209)||(28781082-28781263)
chr6 (28-209)||(26048788-26048969)
chr6 (28-209)||(26069957-26070138)
chr6 (28-209)||(27604768-27604949)
chr6 (28-221)||(27706465-27706658)
chr6 (28-221)||(28786209-28786402)
chr6 (28-221)||(28792330-28792523)
chr6 (28-209)||(26823783-26823964)
chr6 (31-209)||(26861559-26861737)
chr6 (28-138)||(28149952-28150061)
chr6 (28-221)||(28242735-28242928)
chr6 (28-187)||(28234529-28234688)
chr6 (28-221)||(28139472-28139665)
chr6 (28-221)||(28226881-28227074)
chr6 (28-136)||(26341997-26342105)
chr6 (28-110)||(27427669-27427751)
chr6 (28-137)||(28181129-28181238)
chr6 (28-137)||(28185381-28185490)
chr6 (28-221)||(28325412-28325605)
chr6 (28-138)||(28297776-28297886)
chr6 (28-138)||(28514187-28514297)
chr6 (28-221)||(27665180-27665373)
chr6 (34-137)||(25506978-25507081)
chr6 (28-137)||(2184303-2184412)
chr6 (28-137)||(26937109-26937218)
chr6 (31-221)||(26949592-26949782)
chr6 (28-70)||(26975134-26975176)
chr6 (28-220)||(26848592-26848784)
chr6 (31-70)||(2184980-2185019)
chr6 (28-71)||(27214498-27214541)
chr6 (28-71)||(27234687-27234730)
chr6 (34-209)||(29825970-29826145)
chr6 (28-70)||(25071741-25071783)
chr6 (28-135)||(28098432-28098539)
chr6 (105-137)||(28491660-28491692)
chr6 (105-137)||(29804070-29804102)
[»] scaffold0349 (2 HSPs)
scaffold0349 (28-221)||(3484-3678)
scaffold0349 (28-221)||(14419-14611)
[»] chr1 (3 HSPs)
chr1 (28-208)||(268407-268587)
chr1 (28-221)||(28127729-28127923)
chr1 (28-221)||(28164412-28164605)
[»] scaffold0277 (2 HSPs)
scaffold0277 (28-221)||(4734-4927)
scaffold0277 (28-209)||(13695-13876)
[»] chr8 (2 HSPs)
chr8 (28-208)||(29273833-29274013)
chr8 (121-221)||(31903782-31903882)
[»] scaffold0419 (1 HSPs)
scaffold0419 (28-209)||(7468-7649)
[»] scaffold1254 (1 HSPs)
scaffold1254 (67-209)||(19-161)
[»] chr4 (7 HSPs)
chr4 (28-221)||(18679617-18679810)
chr4 (28-221)||(18724135-18724328)
chr4 (28-221)||(18731554-18731747)
chr4 (32-221)||(18655531-18655720)
chr4 (28-221)||(18699450-18699643)
chr4 (28-110)||(17989103-17989185)
chr4 (28-110)||(18073804-18073886)
[»] scaffold0038 (4 HSPs)
scaffold0038 (28-221)||(42897-43090)
scaffold0038 (28-187)||(34690-34849)
scaffold0038 (28-221)||(27379-27572)
scaffold0038 (28-221)||(116727-116920)
[»] scaffold0019 (1 HSPs)
scaffold0019 (28-221)||(58345-58538)
[»] scaffold0003 (1 HSPs)
scaffold0003 (28-110)||(59612-59694)
[»] chr2 (2 HSPs)
chr2 (28-137)||(3279703-3279812)
chr2 (28-70)||(17993747-17993789)


Alignment Details
Target: chr6 (Bit Score: 203; Significance: 1e-111; HSPs: 62)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 15 - 221
Target Start/End: Complemental strand, 26884300 - 26884094
Alignment:
Q  15 agcagagaatgacatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggtagaaaatattggaataaaaattctagattcttcaatggcc 114  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26884300 agcagtgaatgacatgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggtagaaaatattggaataaaaattctagattcttcaatggcc 26884201  T
Q  115 ttgatgagtgatggtgtgatttcgcttcctcttggaagatgattatcatcaatgaaggtgtggattcccttgttagtaagagccttgtagagatttccag 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26884200 ttgatgagtgatggtgtgatttcgcttcctcttggaagatgattatcatcaatgaaggtgtggattcccttgttagtaagagccttgtagagatttccag 26884101  T
Q  215 tgaaacc 221  Q
    |||||||    
T  26884100 tgaaacc 26884094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 28 - 221
Target Start/End: Original strand, 27611065 - 27611258
Alignment:
Q  28 atgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggtagaaaatattggaataaaaattctagattcttcaatggccttgatgagtgatg 127  Q
    |||||||||||||||||||||||||| |||||||| ||||||||| ||||||| |  ||||||||||| |||||||| ||||||||||||| ||||||||    
T  27611065 atgtggacaagttcgtccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagattcatcaatggccttgaggagtgatg 27611164  T
Q  128 gtgtgatttcgcttcctcttggaagatgattatcatcaatgaaggtgtggattcccttgttagtaagagccttgtagagatttccagtgaaacc 221  Q
    ||||||||||   |||||||||||||| ||| |||||||||||||| ||||||||||||| |||||||||||||||||||||||| || |||||    
T  27611165 gtgtgatttcatctcctcttggaagatcattgtcatcaatgaaggtatggattcccttgtcagtaagagccttgtagagatttccggtaaaacc 27611258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 28 - 221
Target Start/End: Original strand, 27698557 - 27698750
Alignment:
Q  28 atgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggtagaaaatattggaataaaaattctagattcttcaatggccttgatgagtgatg 127  Q
    |||||||||||||||||||||||||||||||||||||||||||||  |||||| |  ||||||||||| |||||||| ||||||||||||| ||||||||    
T  27698557 atgtggacaagttcgtccaaacaaaatgaagaagatgcatagttgagagaaaacacaggaataaaaatcctagattcatcaatggccttgaggagtgatg 27698656  T
Q  128 gtgtgatttcgcttcctcttggaagatgattatcatcaatgaaggtgtggattcccttgttagtaagagccttgtagagatttccagtgaaacc 221  Q
    ||||||||||   ||||||| |||||| ||| |||||||||||||| ||||||||||||| |||||||||||||||||||||||| || |||||    
T  27698657 gtgtgatttcatctcctctttgaagatcattgtcatcaatgaaggtatggattcccttgtcagtaagagccttgtagagatttccggtaaaacc 27698750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 37 - 209
Target Start/End: Complemental strand, 27229347 - 27229175
Alignment:
Q  37 agttcgtccaaacaaaatgaagaagatgcatagttggtagaaaatattggaataaaaattctagattcttcaatggccttgatgagtgatggtgtgattt 136  Q
    ||||||| ||||||||||||||||||||||||||||| ||||||||| ||||||||||| | |||||| ||||||||||||| |||||||||||||||||    
T  27229347 agttcgttcaaacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaatccgagattcgtcaatggccttgacgagtgatggtgtgattt 27229248  T
Q  137 cgcttcctcttggaagatgattatcatcaatgaaggtgtggattcccttgttagtaagagccttgtagagatt 209  Q
    ||  ||||||| |||||| ||| |||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  27229247 cgtctcctctttgaagatcattgtcatcaatgaaggtatggattcccttgtcagtaagagccttgtagagatt 27229175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 28 - 212
Target Start/End: Original strand, 27718442 - 27718626
Alignment:
Q  28 atgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggtagaaaatattggaataaaaattctagattcttcaatggccttgatgagtgatg 127  Q
    |||||||||||||||||||||||||| |||||||| ||||||||| ||||||| |  ||||||||||| |||||||| ||||||||||||| ||||||||    
T  27718442 atgtggacaagttcgtccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagattcatcaatggccttgaggagtgatg 27718541  T
Q  128 gtgtgatttcgcttcctcttggaagatgattatcatcaatgaaggtgtggattcccttgttagtaagagccttgtagagatttcc 212  Q
    ||||||||||   ||||||| |||||| ||| |||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  27718542 gtgtgatttcatctcctctttgaagatcattgtcatcaatgaaggtatggattcccttgtcagtaagagccttgtagagatttcc 27718626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 28 - 221
Target Start/End: Original strand, 27724908 - 27725101
Alignment:
Q  28 atgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggtagaaaatattggaataaaaattctagattcttcaatggccttgatgagtgatg 127  Q
    |||||||||||||||||||||||||| |||||| | ||||||||| ||||||| |  ||||||||||| |||||||| ||||||||||||| ||||||||    
T  27724908 atgtggacaagttcgtccaaacaaaacgaagaataggcatagttgatagaaaacacaggaataaaaatcctagattcatcaatggccttgaggagtgatg 27725007  T
Q  128 gtgtgatttcgcttcctcttggaagatgattatcatcaatgaaggtgtggattcccttgttagtaagagccttgtagagatttccagtgaaacc 221  Q
    ||||||||||   ||||||| |||||| ||| |||||||||||||| ||||||||||||| |||||||||||||||||||||||| || |||||    
T  27725008 gtgtgatttcatctcctctttgaagatcattgtcatcaatgaaggtatggattcccttgtcagtaagagccttgtagagatttccggtaaaacc 27725101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 28 - 209
Target Start/End: Complemental strand, 25579843 - 25579662
Alignment:
Q  28 atgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggtagaaaatattggaataaaaattctagattcttcaatggccttgatgagtgatg 127  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||  |||||||    
T  25579843 atgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaatcctagattcttcaatggccttgacaagtgatg 25579744  T
Q  128 gtgtgatttcgcttcctcttggaagatgattatcatcaatgaaggtgtggattcccttgttagtaagagccttgtagagatt 209  Q
    ||||||||||   ||||||| |||||| ||||||||||| ||||||  | |||||||||| |  ||||||||| ||||||||    
T  25579743 gtgtgatttcatctcctctttgaagatcattatcatcaaagaaggtacgaattcccttgtcaacaagagccttatagagatt 25579662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 28 - 221
Target Start/End: Complemental strand, 26646603 - 26646410
Alignment:
Q  28 atgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggtagaaaatattggaataaaaattctagattcttcaatggccttgatgagtgatg 127  Q
    |||||||||||||||||||||||||||  |||||| ||||||||| ||||||| |  ||||||||||| |||||||||||||||||||||||||||||||    
T  26646603 atgtggacaagttcgtccaaacaaaatttagaagaggcatagttgatagaaaacacaggaataaaaatcctagattcttcaatggccttgatgagtgatg 26646504  T
Q  128 gtgtgatttcgcttcctcttggaagatgattatcatcaatgaaggtgtggattcccttgttagtaagagccttgtagagatttccagtgaaacc 221  Q
    ||||||||||   ||||||   ||||| |  |||||||||||||||||| |||||||||| |||||||||||||||||||| |||||| |||||    
T  26646503 gtgtgatttcatctcctctcttaagatcacaatcatcaatgaaggtgtgaattcccttgtcagtaagagccttgtagagatgtccagtaaaacc 26646410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 28 - 209
Target Start/End: Complemental strand, 26656113 - 26655932
Alignment:
Q  28 atgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggtagaaaatattggaataaaaattctagattcttcaatggccttgatgagtgatg 127  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| || ||||||||||||||||| | ||||||||    
T  26656113 atgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaatcctggattcttcaatggccttaacgagtgatg 26656014  T
Q  128 gtgtgatttcgcttcctcttggaagatgattatcatcaatgaaggtgtggattcccttgttagtaagagccttgtagagatt 209  Q
    ||||||||||   ||||||  |||||| ||| ||||||||||| || ||||||||||| | | |||||||||||||||||||    
T  26656013 gtgtgatttcatctcctctgagaagatcattgtcatcaatgaaagtatggattcccttatcaataagagccttgtagagatt 26655932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 28 - 221
Target Start/End: Complemental strand, 26752571 - 26752378
Alignment:
Q  28 atgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggtagaaaatattggaataaaaattctagattcttcaatggccttgatgagtgatg 127  Q
    |||||||||||||||||||||||||||  |||||| ||||||||| ||||||| |  ||||||||||| |||||||||||||||||||||||||||||||    
T  26752571 atgtggacaagttcgtccaaacaaaatttagaagaggcatagttgatagaaaacacaggaataaaaatcctagattcttcaatggccttgatgagtgatg 26752472  T
Q  128 gtgtgatttcgcttcctcttggaagatgattatcatcaatgaaggtgtggattcccttgttagtaagagccttgtagagatttccagtgaaacc 221  Q
    ||||||||||   ||||||   ||||| |  |||||||||||||||||| |||||||||| |||||||||||||||||||| |||||| |||||    
T  26752471 gtgtgatttcatctcctctcttaagatcacaatcatcaatgaaggtgtgaattcccttgtcagtaagagccttgtagagatgtccagtaaaacc 26752378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 28 - 209
Target Start/End: Complemental strand, 26762084 - 26761903
Alignment:
Q  28 atgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggtagaaaatattggaataaaaattctagattcttcaatggccttgatgagtgatg 127  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| || ||||||||||||||||| | ||||||||    
T  26762084 atgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaatcctggattcttcaatggccttaacgagtgatg 26761985  T
Q  128 gtgtgatttcgcttcctcttggaagatgattatcatcaatgaaggtgtggattcccttgttagtaagagccttgtagagatt 209  Q
    ||||||||||   ||||||  |||||| ||| ||||||||||| || ||||||||||| | | |||||||||||||||||||    
T  26761984 gtgtgatttcatctcctctgagaagatcattgtcatcaatgaaagtatggattcccttatcaataagagccttgtagagatt 26761903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 28 - 221
Target Start/End: Original strand, 27593083 - 27593276
Alignment:
Q  28 atgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggtagaaaatattggaataaaaattctagattcttcaatggccttgatgagtgatg 127  Q
    |||||| ||||||||||||||||||| |||||||| ||||||||| ||||||| |  ||||||||||| ||||| ||||||||||||||||  |||||||    
T  27593083 atgtggtcaagttcgtccaaacaaaacgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagactcttcaatggccttgagaagtgatg 27593182  T
Q  128 gtgtgatttcgcttcctcttggaagatgattatcatcaatgaaggtgtggattcccttgttagtaagagccttgtagagatttccagtgaaacc 221  Q
    ||||||||||  |||||||| |||||  ||| |||||||||||||||| ||||||||||| ||||||||||||||||||||| || ||||||||    
T  27593183 gtgtgatttcatttcctctttgaagaccattgtcatcaatgaaggtgttgattcccttgtcagtaagagccttgtagagattgccggtgaaacc 27593276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 28 - 221
Target Start/End: Complemental strand, 27679070 - 27678877
Alignment:
Q  28 atgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggtagaaaatattggaataaaaattctagattcttcaatggccttgatgagtgatg 127  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| ||||||| |  ||||||||||| ||||| ||||||||||||||||  |||||||    
T  27679070 atgtggacaagttcgtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagactcttcaatggccttgagaagtgatg 27678971  T
Q  128 gtgtgatttcgcttcctcttggaagatgattatcatcaatgaaggtgtggattcccttgttagtaagagccttgtagagatttccagtgaaacc 221  Q
    ||||||||||   ||||||| |||||  ||| | |||||||||||||| ||||||||||| ||||||||||||||||||||| || ||||||||    
T  27678970 gtgtgatttcatctcctctttgaagaccattcttatcaatgaaggtgttgattcccttgtcagtaagagccttgtagagattcccggtgaaacc 27678877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 28 - 209
Target Start/End: Complemental strand, 26142989 - 26142808
Alignment:
Q  28 atgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggtagaaaatattggaataaaaattctagattcttcaatggccttgatgagtgatg 127  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||  |||||||    
T  26142989 atgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaatcctagattcttcaatggccttgacaagtgatg 26142890  T
Q  128 gtgtgatttcgcttcctcttggaagatgattatcatcaatgaaggtgtggattcccttgttagtaagagccttgtagagatt 209  Q
    ||||||||||   |||||||  ||||| ||||||||||||||| ||  | |||||||||| |  ||||||||| ||||||||    
T  26142889 gtgtgatttcatctcctctttcaagatcattatcatcaatgaaagtacgaattcccttgtcaacaagagccttatagagatt 26142808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 28 - 209
Target Start/End: Complemental strand, 26802566 - 26802385
Alignment:
Q  28 atgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggtagaaaatattggaataaaaattctagattcttcaatggccttgatgagtgatg 127  Q
    ||||| |||||||||||||| ||||||   ||||| ||||||||| ||||||| |  |||||||||||||||||||||||||||||||||||||||||||    
T  26802566 atgtgaacaagttcgtccaagcaaaattttgaagaggcatagttgatagaaaacacaggaataaaaattctagattcttcaatggccttgatgagtgatg 26802467  T
Q  128 gtgtgatttcgcttcctcttggaagatgattatcatcaatgaaggtgtggattcccttgttagtaagagccttgtagagatt 209  Q
    ||||||||||   ||||||| |||||| ||| |||||||||||||| ||||||||||||| | |||||||||||||||||||    
T  26802466 gtgtgatttcatctcctctttgaagatcattgtcatcaatgaaggtatggattcccttgtcaataagagccttgtagagatt 26802385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 28 - 209
Target Start/End: Complemental strand, 25481866 - 25481685
Alignment:
Q  28 atgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggtagaaaatattggaataaaaattctagattcttcaatggccttgatgagtgatg 127  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| |||| ||||||||||||||||||||||  |||||||    
T  25481866 atgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaatatgggaatacaaatcctagattcttcaatggccttgacaagtgatg 25481767  T
Q  128 gtgtgatttcgcttcctcttggaagatgattatcatcaatgaaggtgtggattcccttgttagtaagagccttgtagagatt 209  Q
    ||||||||||   ||||||| |||||| ||| ||||||||||| ||  | |||||||||| |  ||||||||| ||||||||    
T  25481766 gtgtgatttcatctcctctttgaagatcattttcatcaatgaaagtacgaattcccttgtcaacaagagccttatagagatt 25481685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 28 - 221
Target Start/End: Original strand, 27531260 - 27531453
Alignment:
Q  28 atgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggtagaaaatattggaataaaaattctagattcttcaatggccttgatgagtgatg 127  Q
    ||||| ||||||||||||||||||||||||||||||||||||||   ||||||||  ||||||||||| ||||||| ||||||||| ||  | |||||||    
T  27531260 atgtgaacaagttcgtccaaacaaaatgaagaagatgcatagttttcagaaaatacgggaataaaaatcctagatttttcaatggcattttttagtgatg 27531359  T
Q  128 gtgtgatttcgcttcctcttggaagatgattatcatcaatgaaggtgtggattcccttgttagtaagagccttgtagagatttccagtgaaacc 221  Q
    ||||||||||   ||||||| |||||| ||| |||||||||||||| | ||||||||||| |||||||||||||||||||||||| || |||||    
T  27531360 gtgtgatttcatctcctctttgaagatcattgtcatcaatgaaggtatagattcccttgtcagtaagagccttgtagagatttccggtaaaacc 27531453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 28 - 221
Target Start/End: Complemental strand, 26623100 - 26622907
Alignment:
Q  28 atgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggtagaaaatattggaataaaaattctagattcttcaatggccttgatgagtgatg 127  Q
    |||||||||||||| |||||||||||||||||| |||||||||||| |||||| |  ||||||||||| ||||| ||||| || || |||   |||||||    
T  26623100 atgtggacaagttcatccaaacaaaatgaagaatatgcatagttgggagaaaacacaggaataaaaatcctagactcttcgatagcattgtcaagtgatg 26623001  T
Q  128 gtgtgatttcgcttcctcttggaagatgattatcatcaatgaaggtgtggattcccttgttagtaagagccttgtagagatttccagtgaaacc 221  Q
    || ||||||||   |||||| |||| | |  ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  26623000 gtttgatttcgtcccctctttgaagttcacgatcatcaatgaaggtgtggattcccttgtcagtaagagccttgtagagatttccagtgaaacc 26622907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 28 - 221
Target Start/End: Complemental strand, 26729078 - 26728885
Alignment:
Q  28 atgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggtagaaaatattggaataaaaattctagattcttcaatggccttgatgagtgatg 127  Q
    |||||||||||||| |||||||||||||||||| |||||||||||| |||||| |  ||||||||||| ||||| ||||| || || |||   |||||||    
T  26729078 atgtggacaagttcatccaaacaaaatgaagaatatgcatagttgggagaaaacacaggaataaaaatcctagactcttcgatagcattgtcaagtgatg 26728979  T
Q  128 gtgtgatttcgcttcctcttggaagatgattatcatcaatgaaggtgtggattcccttgttagtaagagccttgtagagatttccagtgaaacc 221  Q
    || ||||||||   |||||| |||| | |  ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  26728978 gtttgatttcgtcccctctttgaagttcacgatcatcaatgaaggtgtggattcccttgtcagtaagagccttgtagagatttccagtgaaacc 26728885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 28 - 221
Target Start/End: Complemental strand, 31284412 - 31284219
Alignment:
Q  28 atgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggtagaaaatattggaataaaaattctagattcttcaatggccttgatgagtgatg 127  Q
    |||||||||||||||||||||||||| || ||||| |||||||||| |||||| |  || |||||||| ||||| ||||||||||| |||  ||||||||    
T  31284412 atgtggacaagttcgtccaaacaaaacgacgaagaggcatagttggcagaaaacacggggataaaaatcctagactcttcaatggcattgtcgagtgatg 31284313  T
Q  128 gtgtgatttcgcttcctcttggaagatgattatcatcaatgaaggtgtggattcccttgttagtaagagccttgtagagatttccagtgaaacc 221  Q
    ||||||||||    |||||| |||| | | |||||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||    
T  31284312 gtgtgatttcatcccctctttgaagttcactatcatcaatgaaggtgtggattcccttgtcagtaagagccttgtagagattgccggtgaaacc 31284219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 31 - 209
Target Start/End: Complemental strand, 25538661 - 25538483
Alignment:
Q  31 tggacaagttcgtccaaacaaaatgaagaagatgcatagttggtagaaaatattggaataaaaattctagattcttcaatggccttgatgagtgatggtg 130  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||||||||  ||||||||||    
T  25538661 tggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaattctagattcttcgatggccttgacaagtgatggtg 25538562  T
Q  131 tgatttcgcttcctcttggaagatgattatcatcaatgaaggtgtggattcccttgttagtaagagccttgtagagatt 209  Q
    |||||||   |||||||  ||||| ||||||||| ||||| ||    |||||||||| |  ||||||||| ||||||||    
T  25538561 tgatttcatctcctctttcaagatcattatcatctatgaaagtactaattcccttgtcaacaagagccttatagagatt 25538483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 28 - 209
Target Start/End: Complemental strand, 26056050 - 26055869
Alignment:
Q  28 atgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggtagaaaatattggaataaaaattctagattcttcaatggccttgatgagtgatg 127  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| | ||||||||| ||||||||||  |||||||    
T  26056050 atgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaatcccagattcttcgatggccttgacaagtgatg 26055951  T
Q  128 gtgtgatttcgcttcctcttggaagatgattatcatcaatgaaggtgtggattcccttgttagtaagagccttgtagagatt 209  Q
     |||||||||   ||||||| |||||| ||| ||||||||||| || |  |||||||||| |  ||||||||| ||||||||    
T  26055950 atgtgatttcatctcctctttgaagatcattttcatcaatgaaagtattaattcccttgtcaacaagagccttatagagatt 26055869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 28 - 209
Target Start/End: Complemental strand, 26076020 - 26075839
Alignment:
Q  28 atgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggtagaaaatattggaataaaaattctagattcttcaatggccttgatgagtgatg 127  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| | ||||||||| ||||||||||  |||||||    
T  26076020 atgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaatcccagattcttcgatggccttgacaagtgatg 26075921  T
Q  128 gtgtgatttcgcttcctcttggaagatgattatcatcaatgaaggtgtggattcccttgttagtaagagccttgtagagatt 209  Q
     |||||||||   ||||||| |||||| ||| ||||||||||| || |  |||||||||| |  ||||||||| ||||||||    
T  26075920 atgtgatttcatctcctctttgaagatcattttcatcaatgaaagtattaattcccttgtcaacaagagccttatagagatt 26075839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 28 - 209
Target Start/End: Original strand, 27338128 - 27338309
Alignment:
Q  28 atgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggtagaaaatattggaataaaaattctagattcttcaatggccttgatgagtgatg 127  Q
    |||||||||||||||||||| ||||||||||||||||||||||| | ||||||||| ||||| ||||| ||||| ||||||||||||||||  |||||||    
T  27338128 atgtggacaagttcgtccaagcaaaatgaagaagatgcatagtttgcagaaaatatgggaatcaaaatcctagactcttcaatggccttgacaagtgatg 27338227  T
Q  128 gtgtgatttcgcttcctcttggaagatgattatcatcaatgaaggtgtggattcccttgttagtaagagccttgtagagatt 209  Q
    ||||| ||||   |||||||  |||||  || |||||||||||||| | ||||||||||| | |||||||||||||||||||    
T  27338228 gtgtgctttcatctcctctttcaagatcgttgtcatcaatgaaggttttgattcccttgtcaataagagccttgtagagatt 27338309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 28 - 209
Target Start/End: Original strand, 27398868 - 27399049
Alignment:
Q  28 atgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggtagaaaatattggaataaaaattctagattcttcaatggccttgatgagtgatg 127  Q
    |||||||||||||||||||| ||||||||||||||||||||||| | ||||||||| ||||| ||||| ||||| ||||||||||||||||  |||||||    
T  27398868 atgtggacaagttcgtccaagcaaaatgaagaagatgcatagtttgcagaaaatatgggaatcaaaatcctagactcttcaatggccttgacaagtgatg 27398967  T
Q  128 gtgtgatttcgcttcctcttggaagatgattatcatcaatgaaggtgtggattcccttgttagtaagagccttgtagagatt 209  Q
    ||||| ||||   |||||||  |||||  || |||||||||||||| | ||||||||||| | |||||||||||||||||||    
T  27398968 gtgtgctttcatctcctctttcaagatcgttgtcatcaatgaaggttttgattcccttgtcaataagagccttgtagagatt 27399049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 28 - 221
Target Start/End: Original strand, 27677677 - 27677870
Alignment:
Q  28 atgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggtagaaaatattggaataaaaattctagattcttcaatggccttgatgagtgatg 127  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| ||||||| |  | ||||||||| ||||| ||||||||||||||||  |||||||    
T  27677677 atgtggacaagttcgtccaaacaaaatgaagaagaggcatagttgatagaaaacacagcaataaaaatcctagactcttcaatggccttgagaagtgatg 27677776  T
Q  128 gtgtgatttcgcttcctcttggaagatgattatcatcaatgaaggtgtggattcccttgttagtaagagccttgtagagatttccagtgaaacc 221  Q
    ||||||||||    |||||| |||| | || ||  ||||||||||||||||||||||||| |  |||||||||||||||||| || ||||||||    
T  27677777 gtgtgatttcatcccctctttgaagttcatgattgtcaatgaaggtgtggattcccttgtcatcaagagccttgtagagattgccggtgaaacc 27677870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 28 - 209
Target Start/End: Complemental strand, 28781263 - 28781082
Alignment:
Q  28 atgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggtagaaaatattggaataaaaattctagattcttcaatggccttgatgagtgatg 127  Q
    ||||| |||||||||||||| ||||||   ||||  ||||||||| ||||||| |  ||||||||||| ||||||||||| |||||||||| ||||||||    
T  28781263 atgtgaacaagttcgtccaagcaaaattttgaagtggcatagttgatagaaaacacaggaataaaaatcctagattcttcgatggccttgaggagtgatg 28781164  T
Q  128 gtgtgatttcgcttcctcttggaagatgattatcatcaatgaaggtgtggattcccttgttagtaagagccttgtagagatt 209  Q
    ||||||||||   ||||||| |||||| ||| |||||||||||||| | ||||||||||| |||||||||||||||||||||    
T  28781163 gtgtgatttcatctcctctttgaagatcattgtcatcaatgaaggttttgattcccttgtcagtaagagccttgtagagatt 28781082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 28 - 209
Target Start/End: Complemental strand, 26048969 - 26048788
Alignment:
Q  28 atgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggtagaaaatattggaataaaaattctagattcttcaatggccttgatgagtgatg 127  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||| ||||||||||  |||   |    
T  26048969 atgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaatcctagattcttccatggccttgacaagtttgg 26048870  T
Q  128 gtgtgatttcgcttcctcttggaagatgattatcatcaatgaaggtgtggattcccttgttagtaagagccttgtagagatt 209  Q
    ||||||||||   |||||||  ||||| ||||||||||||||| ||    |||||||||| | | |||||||| ||||||||    
T  26048869 gtgtgatttcatctcctctttcaagatcattatcatcaatgaaagtacaaattcccttgtcaatgagagccttatagagatt 26048788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 28 - 209
Target Start/End: Complemental strand, 26070138 - 26069957
Alignment:
Q  28 atgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggtagaaaatattggaataaaaattctagattcttcaatggccttgatgagtgatg 127  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||| ||||||||||  |||   |    
T  26070138 atgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggcagaaaatatgggaataaaaatcctagattcttccatggccttgacaagtttgg 26070039  T
Q  128 gtgtgatttcgcttcctcttggaagatgattatcatcaatgaaggtgtggattcccttgttagtaagagccttgtagagatt 209  Q
    ||||||||||   |||||||  ||||| ||||||||||||||| ||    |||||||||| | | |||||||| ||||||||    
T  26070038 gtgtgatttcatctcctctttcaagatcattatcatcaatgaaagtacaaattcccttgtcaatgagagccttatagagatt 26069957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 28 - 209
Target Start/End: Original strand, 27604768 - 27604949
Alignment:
Q  28 atgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggtagaaaatattggaataaaaattctagattcttcaatggccttgatgagtgatg 127  Q
    ||||| |||||||| ||||||||||| |||||||| ||||| ||| ||||||| |  ||||||||||| || ||||| |||||||||||||  |||| ||    
T  27604768 atgtgaacaagttcatccaaacaaaaggaagaagaggcatatttgatagaaaacacaggaataaaaatcctggattcatcaatggccttgagaagtgctg 27604867  T
Q  128 gtgtgatttcgcttcctcttggaagatgattatcatcaatgaaggtgtggattcccttgttagtaagagccttgtagagatt 209  Q
    ||||||||||   ||||||| |||||| ||| |||||||||||||| || |||||||||| |||||||||||||||||||||    
T  27604868 gtgtgatttcatctcctcttcgaagatcattttcatcaatgaaggtatgaattcccttgtcagtaagagccttgtagagatt 27604949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 28 - 221
Target Start/End: Original strand, 27706465 - 27706658
Alignment:
Q  28 atgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggtagaaaatattggaataaaaattctagattcttcaatggccttgatgagtgatg 127  Q
    ||||||||||||||||||||||||||||||||||| |||||| || ||||||| |  ||||||||||| ||||| ||||||||||||||||  |||||||    
T  27706465 atgtggacaagttcgtccaaacaaaatgaagaagaggcataggtgatagaaaacacaggaataaaaatcctagactcttcaatggccttgagaagtgatg 27706564  T
Q  128 gtgtgatttcgcttcctcttggaagatgattatcatcaatgaaggtgtggattcccttgttagtaagagccttgtagagatttccagtgaaacc 221  Q
    ||||||||||    | |||| |||| | || ||  ||||||||||||||||||||||||| |  || ||||||||||||||| || ||||||||    
T  27706565 gtgtgatttcatcccttctttgaagttcatgattgtcaatgaaggtgtggattcccttgtcatcaaaagccttgtagagattgcctgtgaaacc 27706658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 28 - 221
Target Start/End: Complemental strand, 28786402 - 28786209
Alignment:
Q  28 atgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggtagaaaatattggaataaaaattctagattcttcaatggccttgatgagtgatg 127  Q
    ||||| |||||||||||||| ||||||   || |  || |||||| ||||||| |  ||||||||||| ||||||||||| |||||||||| ||||||||    
T  28786402 atgtgaacaagttcgtccaagcaaaattttgatgtggcgtagttgatagaaaacacaggaataaaaatcctagattcttcgatggccttgaggagtgatg 28786303  T
Q  128 gtgtgatttcgcttcctcttggaagatgattatcatcaatgaaggtgtggattcccttgttagtaagagccttgtagagatttccagtgaaacc 221  Q
    ||||||||||   ||||||| |||||| ||| |||||||||||||| | ||||||||||| |||||||||||||||||||||||| || |||||    
T  28786302 gtgtgatttcatctcctctttgaagatcattgtcatcaatgaaggttttgattcccttgtcagtaagagccttgtagagatttccggtaaaacc 28786209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 28 - 221
Target Start/End: Complemental strand, 28792523 - 28792330
Alignment:
Q  28 atgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggtagaaaatattggaataaaaattctagattcttcaatggccttgatgagtgatg 127  Q
    ||||| |||||||||||||| ||||||   || |  || |||||| ||||||| |  ||||||||||| ||||||||||| |||||||||| ||||||||    
T  28792523 atgtgaacaagttcgtccaagcaaaattttgatgtggcgtagttgatagaaaacacaggaataaaaatcctagattcttcgatggccttgaggagtgatg 28792424  T
Q  128 gtgtgatttcgcttcctcttggaagatgattatcatcaatgaaggtgtggattcccttgttagtaagagccttgtagagatttccagtgaaacc 221  Q
    ||||||||||   ||||||| |||||| ||| |||||||||||||| | ||||||||||| |||||||||||||||||||||||| || |||||    
T  28792423 gtgtgatttcatctcctctttgaagatcattgtcatcaatgaaggttttgattcccttgtcagtaagagccttgtagagatttccggtaaaacc 28792330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 28 - 209
Target Start/End: Complemental strand, 26823964 - 26823783
Alignment:
Q  28 atgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggtagaaaatattggaataaaaattctagattcttcaatggccttgatgagtgatg 127  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| |||||| |  ||||||||||| ||||| ||||||||||| ||  ||||||||     
T  26823964 atgtggacaagttcgtccaaacaaaatgaagaagaggcatagttggcagaaaacacaggaataaaaatcctagactcttcaatggcattattgagtgatt 26823865  T
Q  128 gtgtgatttcgcttcctcttggaagatgattatcatcaatgaaggtgtggattcccttgttagtaagagccttgtagagatt 209  Q
    ||  |||||     |||||| |||| | |  ||||||||  |||||||||||||||||||  ||||||||||||||||||||    
T  26823864 gttcgattttatcccctctttgaagttcacgatcatcaaaaaaggtgtggattcccttgtctgtaagagccttgtagagatt 26823783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 31 - 209
Target Start/End: Complemental strand, 26861737 - 26861559
Alignment:
Q  31 tggacaagttcgtccaaacaaaatgaagaagatgcatagttggtagaaaatattggaataaaaattctagattcttcaatggccttgatgagtgatggtg 130  Q
    ||||||||||| |||||||||||||| ||||| |||||||||| |||||| |  ||||| ||||||||||| ||||||||||| |||  |||||||  |     
T  26861737 tggacaagttcatccaaacaaaatgacgaagaggcatagttggcagaaaacacaggaatgaaaattctagactcttcaatggcattgtcgagtgatcttt 26861638  T
Q  131 tgatttcgcttcctcttggaagatgattatcatcaatgaaggtgtggattcccttgttagtaagagccttgtagagatt 209  Q
    |||||||    |||||| |||| | |  |||||| ||||||||||| |||||||||| |||||||||||||||||||||    
T  26861637 tgatttcatcccctctttgaagttcacgatcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagatt 26861559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 28 - 138
Target Start/End: Complemental strand, 28150061 - 28149952
Alignment:
Q  28 atgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggtagaaaatattggaataaaaattctagattcttcaatggccttgatgagtgatg 127  Q
    ||||||||||||||||||||||||||||||||||| | ||||||| |||| || |||||||| ||||| || || |||||||||||||||| ||||||||    
T  28150061 atgtggacaagttcgtccaaacaaaatgaagaagaagtatagttgatagagaagattggaatgaaaatcctggactcttcaatggccttga-gagtgatg 28149963  T
Q  128 gtgtgatttcg 138  Q
    |||||||||||    
T  28149962 gtgtgatttcg 28149952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 28 - 221
Target Start/End: Complemental strand, 28242928 - 28242735
Alignment:
Q  28 atgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggtagaaaatattggaataaaaattctagattcttcaatggccttgatgagtgatg 127  Q
    |||||||||||||||||||| |||||||||||||| ||||| ||| |||| || |  ||||| ||||| ||||| ||||||||||||||||  |||||||    
T  28242928 atgtggacaagttcgtccaagcaaaatgaagaagaagcataattgatagacaagacaggaatgaaaatcctagactcttcaatggccttgaaaagtgatg 28242829  T
Q  128 gtgtgatttcgcttcctcttggaagatgattatcatcaatgaaggtgtggattcccttgttagtaagagccttgtagagatttccagtgaaacc 221  Q
    |||| |||| |   |||| |||||| |   | ||||||||||||||| | |||||||| |||  |||| | ||||||||||||||||| |||||    
T  28242828 gtgttattttgtcacctcctggaagttctctgtcatcaatgaaggtgcgaattcccttcttacaaagatctttgtagagatttccagtaaaacc 28242735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 28 - 187
Target Start/End: Complemental strand, 28234688 - 28234529
Alignment:
Q  28 atgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggtagaaaatattggaataaaaattctagattcttcaatggccttgatgagtgatg 127  Q
    |||||||||||||||||||| |||||||||||||| ||||| ||| |||| || |  ||||| ||||| ||||| ||||||||||||||||  |||||||    
T  28234688 atgtggacaagttcgtccaagcaaaatgaagaagaagcataattgatagacaagacaggaatgaaaatcctagactcttcaatggccttgaaaagtgatg 28234589  T
Q  128 gtgtgatttcgcttcctcttggaagatgattatcatcaatgaaggtgtggattcccttgt 187  Q
    |||| |||||   ||||| | |||| |   | ||||||||||||||||||||||||||||    
T  28234588 gtgttatttcatctcctccttgaagctccctgtcatcaatgaaggtgtggattcccttgt 28234529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 28 - 221
Target Start/End: Complemental strand, 28139665 - 28139472
Alignment:
Q  28 atgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggtagaaaatattggaataaaaattctagattcttcaatggccttgatgagtgatg 127  Q
    |||||||||||||||||||| ||||| |||||||| ||||||||| | ||||| |  || || ||||| ||||||||||||||||| || | |||||| |    
T  28139665 atgtggacaagttcgtccaagcaaaacgaagaagaggcatagttgatggaaaacacagggatgaaaatcctagattcttcaatggcttttacgagtgacg 28139566  T
Q  128 gtgtgatttcgcttcctcttggaagatgattatcatcaatgaaggtgtggattcccttgttagtaagagccttgtagagatttccagtgaaacc 221  Q
    |||  ||||||   |||| | |||| |   |||||||||| || |||||||||||   || |  |||||| |||||||||||||||||||||||    
T  28139565 gtgatatttcgtcacctccttgaagctccctatcatcaataaaagtgtggattccacagtcacgaagagctttgtagagatttccagtgaaacc 28139472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 28 - 221
Target Start/End: Complemental strand, 28227074 - 28226881
Alignment:
Q  28 atgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggtagaaaatattggaataaaaattctagattcttcaatggccttgatgagtgatg 127  Q
    |||||||||||||||||||| |||||||||||||| ||||| ||| |||| || |  ||||| ||||| ||||||||||||||| ||||||  |||||||    
T  28227074 atgtggacaagttcgtccaagcaaaatgaagaagaagcataattgatagacaagacaggaatgaaaatcctagattcttcaatgaccttgaaaagtgatg 28226975  T
Q  128 gtgtgatttcgcttcctcttggaagatgattatcatcaatgaaggtgtggattcccttgttagtaagagccttgtagagatttccagtgaaacc 221  Q
     ||| |||||    |||| | |||| |   ||||||||| ||| ||||| |||||||| |||  |||| |  |||||||||||||||| |||||    
T  28226974 atgttatttcatcacctccttgaagctctctatcatcaaagaatgtgtgaattcccttcttacaaagatcactgtagagatttccagtaaaacc 28226881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 28 - 136
Target Start/End: Original strand, 26341997 - 26342105
Alignment:
Q  28 atgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggtagaaaatattggaataaaaattctagattcttcaatggccttgatgagtgatg 127  Q
    |||||||||||||||||||||||||| |||||||| ||||||||| | || || |||||||| ||||| || || ||||||||||| ||||  ||||||     
T  26341997 atgtggacaagttcgtccaaacaaaacgaagaagaagcatagttgattgagaaaattggaatgaaaatcctggactcttcaatggctttgacaagtgatt 26342096  T
Q  128 gtgtgattt 136  Q
    |||||||||    
T  26342097 gtgtgattt 26342105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 28 - 110
Target Start/End: Original strand, 27427669 - 27427751
Alignment:
Q  28 atgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggtagaaaatattggaataaaaattctagattcttcaat 110  Q
    ||||||||||||  |||||||||| ||||||||||||||||||||| ||||||||| ||||| ||||| || |||||||||||    
T  27427669 atgtggacaagtgtgtccaaacaagatgaagaagatgcatagttggcagaaaatatgggaatcaaaatcctggattcttcaat 27427751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 28 - 137
Target Start/End: Complemental strand, 28181238 - 28181129
Alignment:
Q  28 atgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggtagaaaatattggaataaaaattctagattcttcaatggccttgatgagtgatg 127  Q
    |||||||||||||||||||| |||||||||||||| ||||| ||| |||| || |  ||||| ||||| ||||| ||||||||||||||||  |||||||    
T  28181238 atgtggacaagttcgtccaagcaaaatgaagaagaagcataattgatagacaagacgggaatgaaaatcctagactcttcaatggccttgaaaagtgatg 28181139  T
Q  128 gtgtgatttc 137  Q
     ||| |||||    
T  28181138 atgttatttc 28181129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 28 - 137
Target Start/End: Complemental strand, 28185490 - 28185381
Alignment:
Q  28 atgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggtagaaaatattggaataaaaattctagattcttcaatggccttgatgagtgatg 127  Q
    |||||||||||||||||||| |||||||||||||| ||||| ||| |||| || |  ||||| ||||| ||||| ||||||||||||||||  |||||||    
T  28185490 atgtggacaagttcgtccaagcaaaatgaagaagaagcataattgatagacaagacgggaatgaaaatcctagactcttcaatggccttgaaaagtgatg 28185391  T
Q  128 gtgtgatttc 137  Q
     ||| |||||    
T  28185390 atgttatttc 28185381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 28 - 221
Target Start/End: Complemental strand, 28325605 - 28325412
Alignment:
Q  28 atgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggtagaaaatattggaataaaaattctagattcttcaatggccttgatgagtgatg 127  Q
    |||||||||||||| ||||| ||||| |||||||| ||||| ||| |||| || || ||||| ||||| ||||| ||||||||||||||||  ||||| |    
T  28325605 atgtggacaagttcatccaagcaaaaggaagaagaagcataattgatagacaaaataggaatgaaaatcctagactcttcaatggccttgaaaagtgacg 28325506  T
Q  128 gtgtgatttcgcttcctcttggaagatgattatcatcaatgaaggtgtggattcccttgttagtaagagccttgtagagatttccagtgaaacc 221  Q
    |||| ||||||   |||| | |||| |  || ||||||||||||||  | |||| |||  ||  |||| | ||||||||||||||||| |||||    
T  28325505 gtgttatttcgtcacctcgttgaaggtctttgtcatcaatgaaggtacgaattctcttcctacaaagatctttgtagagatttccagtaaaacc 28325412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 28 - 138
Target Start/End: Original strand, 28297776 - 28297886
Alignment:
Q  28 atgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggtagaaaatattggaataaaaattctagattcttcaatggccttgatgagtgatg 127  Q
    |||||||||||||||||||| |||||||||||||| ||||| |||||||| || |  ||||| ||||| ||||  |||||||||  |||||  |||||||    
T  28297776 atgtggacaagttcgtccaagcaaaatgaagaagaagcataattggtagataagacaggaatgaaaatcctagtctcttcaatgtgcttgaaaagtgatg 28297875  T
Q  128 gtgtgatttcg 138  Q
    |||| ||||||    
T  28297876 gtgttatttcg 28297886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 28 - 138
Target Start/End: Complemental strand, 28514297 - 28514187
Alignment:
Q  28 atgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggtagaaaatattggaataaaaattctagattcttcaatggccttgatgagtgatg 127  Q
    |||||||||||||||||||| |||||||||||||| ||||| |||||||| || |  ||||| ||||| ||||  |||||||||  |||||  |||||||    
T  28514297 atgtggacaagttcgtccaagcaaaatgaagaagaagcataattggtagataagacaggaatgaaaatcctagtctcttcaatgtgcttgaaaagtgatg 28514198  T
Q  128 gtgtgatttcg 138  Q
    |||| ||||||    
T  28514197 gtgttatttcg 28514187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 28 - 221
Target Start/End: Original strand, 27665180 - 27665373
Alignment:
Q  28 atgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggtagaaaatattggaataaaaattctagattcttcaatggccttgatgagtgatg 127  Q
    |||||||||||||| || ||||||||||||||||  ||||||||  |||| |||||   |||   ||| || ||||||||||||  |||   |||||| |    
T  27665180 atgtggacaagttcatctaaacaaaatgaagaagtagcatagttcttagagaatataataatggcaatcctcgattcttcaatgctcttccggagtgaag 27665279  T
Q  128 gtgtgatttcgcttcctcttggaagatgattatcatcaatgaaggtgtggattcccttgttagtaagagccttgtagagatttccagtgaaacc 221  Q
    |||||||||||   ||  ||||||| |  || ||||||||||||||||||||||| |||| || ||||||||| ||||| || || ||||||||    
T  27665280 gtgtgatttcgtcaccagttggaagctccttgtcatcaatgaaggtgtggattcctttgtcagaaagagccttatagaggttaccggtgaaacc 27665373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 34 - 137
Target Start/End: Original strand, 25506978 - 25507081
Alignment:
Q  34 acaagttcgtccaaacaaaatgaagaagatgcatagttggtagaaaatattggaataaaaattctagattcttcaatggccttgatgagtgatggtgtga 133  Q
    |||||||| ||||||||||||   ||||| ||||||||| ||||||  |  ||||||||||| |||||||||||||||||  ||| || |||||||||||    
T  25506978 acaagttcctccaaacaaaattttgaagaggcatagttgatagaaagaaccggaataaaaatcctagattcttcaatggcgatgacgactgatggtgtga 25507077  T
Q  134 tttc 137  Q
    ||||    
T  25507078 tttc 25507081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 137
Target Start/End: Complemental strand, 2184412 - 2184303
Alignment:
Q  28 atgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggtagaaaatattggaataaaaattctagattcttcaatggccttgatgagtgatg 127  Q
    ||||||||||||||||||||||||||||||||||| ||||||||  | || || |  || || |||||||| || ||||||||||| || || |||||||    
T  2184412 atgtggacaagttcgtccaaacaaaatgaagaagaagcatagttctttgagaaaacagggatgaaaattctggactcttcaatggctttcataagtgatg 2184313  T
Q  128 gtgtgatttc 137  Q
     ||| |||||    
T  2184312 ctgttatttc 2184303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 137
Target Start/End: Complemental strand, 26937218 - 26937109
Alignment:
Q  28 atgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggtagaaaatattggaataaaaattctagattcttcaatggccttgatgagtgatg 127  Q
    ||||||||||||||||||||||||||||||||||  ||||||||| |||| ||||  || ||   ||| |  || |||||||| |||||||  |||||||    
T  26937218 atgtggacaagttcgtccaaacaaaatgaagaagtggcatagttgatagagaatacaggtatggcaatcccggaatcttcaattgccttgacaagtgatg 26937119  T
Q  128 gtgtgatttc 137  Q
    ||||||||||    
T  26937118 gtgtgatttc 26937109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 31 - 221
Target Start/End: Complemental strand, 26949782 - 26949592
Alignment:
Q  31 tggacaagttcgtccaaacaaaatgaagaagatgcatagttggtagaaaatattggaataaaaattctagattcttcaatggccttgatgagtgatggtg 130  Q
    |||||||||||||| ||||||||||||||||| ||||| |   ||||||| |    |||   |||||| |||||||||||   ||||| |||||| ||||    
T  26949782 tggacaagttcgtctaaacaaaatgaagaagaagcatattccttagaaaagacgataatggcaattctcgattcttcaattctcttgaggagtgaaggtg 26949683  T
Q  131 tgatttcgcttcctcttggaagatgattatcatcaatgaaggtgtggattcccttgttagtaagagccttgtagagatttccagtgaaacc 221  Q
    ||||||||   ||| |  |||| |  |||||||||||||||||  |||||||||||| ||  ||||| || |||||||| || ||||||||    
T  26949682 tgatttcgtcacctttctgaagctccttatcatcaatgaaggttcggattcccttgtcagagagagctttatagagattaccggtgaaacc 26949592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 28 - 70
Target Start/End: Complemental strand, 26975176 - 26975134
Alignment:
Q  28 atgtggacaagttcgtccaaacaaaatgaagaagatgcatagt 70  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  26975176 atgtggacaagttcgtccaaacaaaatgaagaagaagcatagt 26975134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 28 - 220
Target Start/End: Complemental strand, 26848784 - 26848592
Alignment:
Q  28 atgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggtagaaaatattggaataaaaattctagattcttcaatggccttgatgagtgatg 127  Q
    |||||||||||||||||||||||||| |||||||  ||||||||   ||| ||||   ||||  |||| || || |||||||||  ||||| ||| || |    
T  26848784 atgtggacaagttcgtccaaacaaaacgaagaagtggcatagttctcagagaatacaagaatggaaatcctcgagtcttcaatgttcttgaggagcgaag 26848685  T
Q  128 gtgtgatttcgcttcctcttggaagatgattatcatcaatgaaggtgtggattcccttgttagtaagagccttgtagagatttccagtgaaac 220  Q
    ||||||| ||    || ||  ||||||  || ||||||||||||||  ||||||| |||| || |||||| || |||||||| ||||||||||    
T  26848684 gtgtgatctcatcaccactctgaagatccttgtcatcaatgaaggttcggattccattgtcagaaagagctttatagagattaccagtgaaac 26848592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 70
Target Start/End: Complemental strand, 2185019 - 2184980
Alignment:
Q  31 tggacaagttcgtccaaacaaaatgaagaagatgcatagt 70  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  2185019 tggacaagttcgtccaaacaaaatgaagaagaagcatagt 2184980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 71
Target Start/End: Complemental strand, 27214541 - 27214498
Alignment:
Q  28 atgtggacaagttcgtccaaacaaaatgaagaagatgcatagtt 71  Q
    ||||||||||||||||||||||||||||||||||  ||||||||    
T  27214541 atgtggacaagttcgtccaaacaaaatgaagaagtagcatagtt 27214498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 71
Target Start/End: Original strand, 27234687 - 27234730
Alignment:
Q  28 atgtggacaagttcgtccaaacaaaatgaagaagatgcatagtt 71  Q
    ||||||||||||||||||||||||||||||||||  ||||||||    
T  27234687 atgtggacaagttcgtccaaacaaaatgaagaagtagcatagtt 27234730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 209
Target Start/End: Complemental strand, 29826145 - 29825970
Alignment:
Q  34 acaagttcgtccaaacaaaatgaagaagatgcatagttggtagaaaatattggaataaaaattctagattcttcaatggccttgatgagtgatggtgtga 133  Q
    |||||||| || || ||||| |||||||| ||||| |||||||| || || |||||    || |||||||||| ||| ||||| |  ||||| |||||||    
T  29826145 acaagttcatctaagcaaaacgaagaagaagcataattggtagagaaaataggaatggctatcctagattcttgaattgccttcacaagtgagggtgtga 29826046  T
Q  134 tttcgcttcctcttggaagatgattatcatcaatgaaggtgtggattcccttgttagtaagagccttgtagagatt 209  Q
    |||||   |||||| |||| |  || ||||||||||||||| | |||  ||||| ||| ||||| |||||||||||    
T  29826045 tttcgtcccctctttgaagctctttgtcatcaatgaaggtgcgaattttcttgtcagttagagctttgtagagatt 29825970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 28 - 70
Target Start/End: Complemental strand, 25071783 - 25071741
Alignment:
Q  28 atgtggacaagttcgtccaaacaaaatgaagaagatgcatagt 70  Q
    ||||||||||||||||| ||||||||||||||||| |||||||    
T  25071783 atgtggacaagttcgtctaaacaaaatgaagaagaagcatagt 25071741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 135
Target Start/End: Original strand, 28098432 - 28098539
Alignment:
Q  28 atgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggtagaaaatattggaataaaaattctagattcttcaatggccttgatgagtgatg 127  Q
    |||||||||||||| |||||||||||  ||||||| ||||||||  |||| || |  ||||| ||||| || || ||||| ||||||||||  || |||     
T  28098432 atgtggacaagttcatccaaacaaaacaaagaagaagcatagttcttagagaagaccggaattaaaatcctggactcttcgatggccttgacaagggatt 28098531  T
Q  128 gtgtgatt 135  Q
    ||||||||    
T  28098532 gtgtgatt 28098539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 137
Target Start/End: Original strand, 28491660 - 28491692
Alignment:
Q  105 ttcaatggccttgatgagtgatggtgtgatttc 137  Q
    ||||||||| |||||||||||||||||||||||    
T  28491660 ttcaatggctttgatgagtgatggtgtgatttc 28491692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 137
Target Start/End: Original strand, 29804070 - 29804102
Alignment:
Q  105 ttcaatggccttgatgagtgatggtgtgatttc 137  Q
    ||||||||| |||||||||||||||||||||||    
T  29804070 ttcaatggctttgatgagtgatggtgtgatttc 29804102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 115; Significance: 2e-58; HSPs: 2)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 28 - 221
Target Start/End: Original strand, 3484 - 3678
Alignment:
Q  28 atgtggacaagttcgtccaaacaaaatgaagaagatgcatag-ttggtagaaaatattggaataaaaattctagattcttcaatggccttgatgagtgat 126  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||| ||||||| |  ||||||||||| |||||||| ||||||||||||| |||||||    
T  3484 atgtggacaagttcgtccaaacaaaatgaagaagaggcataggttgatagaaaacacaggaataaaaatcctagattcatcaatggccttgaggagtgat 3583  T
Q  127 ggtgtgatttcgcttcctcttggaagatgattatcatcaatgaaggtgtggattcccttgttagtaagagccttgtagagatttccagtgaaacc 221  Q
    |||||||||||   ||||||| |||||| ||| |||||||||||||| ||||||||||||| |||||||||||||||||||||||| || |||||    
T  3584 ggtgtgatttcatctcctctttgaagatcattgtcatcaatgaaggtatggattcccttgtcagtaagagccttgtagagatttccggtaaaacc 3678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #2
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 28 - 221
Target Start/End: Original strand, 14419 - 14611
Alignment:
Q  28 atgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggtagaaaatattggaataaaaattctagattcttcaatggccttgatgagtgatg 127  Q
    |||||||||||||||||||||||||| |||||| | ||||||||| ||||||| |  ||||||||||| |||||||| ||||||||||||| ||||||||    
T  14419 atgtggacaagttcgtccaaacaaaacgaagaa-aggcatagttgatagaaaacacaggaataaaaatcctagattcatcaatggccttgaggagtgatg 14517  T
Q  128 gtgtgatttcgcttcctcttggaagatgattatcatcaatgaaggtgtggattcccttgttagtaagagccttgtagagatttccagtgaaacc 221  Q
    ||||||||||   ||||||| |||||| ||| |||||||||||||| ||||||||||||| |||||||||||||||||||||||| || |||||    
T  14518 gtgtgatttcatctcctctttgaagatcattgtcatcaatgaaggtatggattcccttgtcagtaagagccttgtagagatttccggtaaaacc 14611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 97; Significance: 8e-48; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 28 - 208
Target Start/End: Original strand, 268407 - 268587
Alignment:
Q  28 atgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggtagaaaatattggaataaaaattctagattcttcaatggccttgatgagtgatg 127  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| ||||||| |  ||||||||||| ||||| ||||||||||| |||  ||||||||    
T  268407 atgtggacaagttcgtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaataaaaatcctagactcttcaatggcattgtcgagtgatg 268506  T
Q  128 gtgtgatttcgcttcctcttggaagatgattatcatcaatgaaggtgtggattcccttgttagtaagagccttgtagagat 208  Q
    || |||||||    |||||| |||| | |  ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  268507 gtttgatttcatcccctctttgaagttcacgatcatcaatgaaggtgtggattcccttgtcagtaagagccttgtagagat 268587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 28 - 221
Target Start/End: Original strand, 28127729 - 28127923
Alignment:
Q  28 atgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggtagaaaatattggaataaaaattctagattcttcaatggccttgatgagtgatg 127  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||||||||| |  ||||| |    
T  28127729 atgtgcacaagttcgtccaaacaaaatgaagaagaggcatagttggtagaaaatacaggaataaaaattctagattcttcaatggcctttaaaagtgacg 28127828  T
Q  128 gtgtgatttcgct-tcctcttggaagatgattatcatcaatgaaggtgtggattcccttgttagtaagagccttgtagagatttccagtgaaacc 221  Q
    |||||||||   | ||||||   ||||| |  |||||||||||| |||||||||||||||| |  ||| |||||||||||||  |||||||||||    
T  28127829 gtgtgatttttttctcctctctcaagattacaatcatcaatgaatgtgtggattcccttgtcataaagggccttgtagagatggccagtgaaacc 28127923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 28 - 221
Target Start/End: Original strand, 28164412 - 28164605
Alignment:
Q  28 atgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggtagaaaatattggaataaaaattctagattcttcaatggccttgatgagtgatg 127  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| |||| || |  ||||||||||||| ||||| ||||||||||||||||| ||| |    
T  28164412 atgtggacaagttcgtccaaacaaaatgaagaagaggcatagttgatagataacacaggaataaaaattcaagatttttcaatggccttgatgaatgacg 28164511  T
Q  128 gtgtgatttcgcttcctcttggaagatgattatcatcaatgaaggtgtggattcccttgttagtaagagccttgtagagatttccagtgaaacc 221  Q
    ||||||||||   ||||||   ||||| |  |||||||||||| ||||| ||||||||||    ||| ||||| |||||||  |||||||||||    
T  28164512 gtgtgatttcttctcctctctcaagatcacaatcatcaatgaatgtgtgaattcccttgtcgtcaagggccttatagagatggccagtgaaacc 28164605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277 (Bit Score: 94; Significance: 5e-46; HSPs: 2)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 28 - 221
Target Start/End: Original strand, 4734 - 4927
Alignment:
Q  28 atgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggtagaaaatattggaataaaaattctagattcttcaatggccttgatgagtgatg 127  Q
    |||||||||||||||||||||||||| |||||| | ||||||  | ||||||| |  ||||||||||| |||||||| ||||||||||||  ||| ||||    
T  4734 atgtggacaagttcgtccaaacaaaacgaagaaaaggcatagaagatagaaaacacaggaataaaaatcctagattcatcaatggccttgcggagggatg 4833  T
Q  128 gtgtgatttcgcttcctcttggaagatgattatcatcaatgaaggtgtggattcccttgttagtaagagccttgtagagatttccagtgaaacc 221  Q
    ||||||||||   ||||||| |||||| ||| |||||||||||||| | ||||||||||| |||||||||||||||||||||||| || |||||    
T  4834 gtgtgatttcatctcctctttgaagatcattgtcatcaatgaaggttttgattcccttgtcagtaagagccttgtagagatttccggtaaaacc 4927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 28 - 209
Target Start/End: Original strand, 13695 - 13876
Alignment:
Q  28 atgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggtagaaaatattggaataaaaattctagattcttcaatggccttgatgagtgatg 127  Q
    ||||| |||||||||||||| ||||||   ||||  || |||||| ||||||| |  ||||||||||| ||||||||||| |||||||||| ||||||||    
T  13695 atgtgaacaagttcgtccaagcaaaattttgaagtggcgtagttgatagaaaacacaggaataaaaatcctagattcttcgatggccttgaggagtgatg 13794  T
Q  128 gtgtgatttcgcttcctcttggaagatgattatcatcaatgaaggtgtggattcccttgttagtaagagccttgtagagatt 209  Q
    ||||||||||   ||||||| |||||| ||| |||||||||||||| | ||||||||||| |||||||||||||||||||||    
T  13795 gtgtgatttcatctcctctttgaagatcattgtcatcaatgaaggttttgattcccttgtcagtaagagccttgtagagatt 13876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 89; Significance: 5e-43; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 28 - 208
Target Start/End: Original strand, 29273833 - 29274013
Alignment:
Q  28 atgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggtagaaaatattggaataaaaattctagattcttcaatggccttgatgagtgatg 127  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| ||||||| |  ||||||||||||||||| ||||||||| | |||  ||||||||    
T  29273833 atgtggacaagttcgtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaataaaaattctagactcttcaatgacattgtcgagtgatg 29273932  T
Q  128 gtgtgatttcgcttcctcttggaagatgattatcatcaatgaaggtgtggattcccttgttagtaagagccttgtagagat 208  Q
     | |||||||    |||||| |||| | |  ||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  29273933 atttgatttcatcccctctttgaagttcacgatcatcaatgaaggtgtggattcccttgtcagtaagagtcttgtagagat 29274013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 121 - 221
Target Start/End: Complemental strand, 31903882 - 31903782
Alignment:
Q  121 agtgatggtgtgatttcgcttcctcttggaagatgattatcatcaatgaaggtgtggattcccttgttagtaagagccttgtagagatttccagtgaaac 220  Q
    |||||||||||||||||   ||||||| |||| |  | ||| ||||| ||||||||||||||||| | |  |||||| ||||||||||||||||| ||||    
T  31903882 agtgatggtgtgatttcatgtcctctttgaagttcttcatcgtcaataaaggtgtggattcccttatcataaagagctttgtagagatttccagtaaaac 31903783  T
Q  221 c 221  Q
    |    
T  31903782 c 31903782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 28 - 209
Target Start/End: Complemental strand, 7649 - 7468
Alignment:
Q  28 atgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggtagaaaatattggaataaaaattctagattcttcaatggccttgatgagtgatg 127  Q
    ||||| |||||||||||||| ||||||   ||||  || |||||| ||||||| |  ||||||||||| ||||||||||| |||||||||| ||||||||    
T  7649 atgtgaacaagttcgtccaagcaaaattttgaagtggcgtagttgatagaaaacacaggaataaaaatcctagattcttcgatggccttgaggagtgatg 7550  T
Q  128 gtgtgatttcgcttcctcttggaagatgattatcatcaatgaaggtgtggattcccttgttagtaagagccttgtagagatt 209  Q
    ||||||||||   ||||||| |||||| ||| |||||||||||||| | ||||||||||| |||||||||||||||||||||    
T  7549 gtgtgatttcatctcctctttgaagatcattgtcatcaatgaaggttttgattcccttgtcagtaagagccttgtagagatt 7468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1254 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold1254
Description:

Target: scaffold1254; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 67 - 209
Target Start/End: Original strand, 19 - 161
Alignment:
Q  67 tagttggtagaaaatattggaataaaaattctagattcttcaatggccttgatgagtgatggtgtgatttcgcttcctcttggaagatgattatcatcaa 166  Q
    |||||| ||||||| |  ||||||||||| ||||||||||| |||||||||| ||||||||||||||||||   ||||||| |||||| ||| |||||||    
T  19 tagttgatagaaaacacaggaataaaaatcctagattcttcgatggccttgaggagtgatggtgtgatttcatctcctctttgaagatcattgtcatcaa 118  T
Q  167 tgaaggtgtggattcccttgttagtaagagccttgtagagatt 209  Q
    ||||||| | ||||||||||| |||||||||||||||||||||    
T  119 tgaaggttttgattcccttgtcagtaagagccttgtagagatt 161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 78; Significance: 2e-36; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 28 - 221
Target Start/End: Original strand, 18679617 - 18679810
Alignment:
Q  28 atgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggtagaaaatattggaataaaaattctagattcttcaatggccttgatgagtgatg 127  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| ||||||| |  ||||| || || ||||| ||||||||||| |||  ||||||||    
T  18679617 atgtggacaagttcgtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaatgaagatcctagactcttcaatggcattgtcgagtgatg 18679716  T
Q  128 gtgtgatttcgcttcctcttggaagatgattatcatcaatgaaggtgtggattcccttgttagtaagagccttgtagagatttccagtgaaacc 221  Q
    || |||||||    |||||| | || | |   ||||||||||||||||||||||| |||| ||||||||||||||||||||  ||||| |||||    
T  18679717 gtttgatttcatcccctctttgcaggtcacggtcatcaatgaaggtgtggattcctttgtcagtaagagccttgtagagatgaccagtaaaacc 18679810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 28 - 221
Target Start/End: Original strand, 18724135 - 18724328
Alignment:
Q  28 atgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggtagaaaatattggaataaaaattctagattcttcaatggccttgatgagtgatg 127  Q
    |||||||||||||||| |||||||||||||||||| ||||||||| ||||||| |  ||||| || || ||||| ||||||||||| |||  ||||||||    
T  18724135 atgtggacaagttcgttcaaacaaaatgaagaagaggcatagttgatagaaaacacaggaatgaagatcctagactcttcaatggcattgtcgagtgatg 18724234  T
Q  128 gtgtgatttcgcttcctcttggaagatgattatcatcaatgaaggtgtggattcccttgttagtaagagccttgtagagatttccagtgaaacc 221  Q
    || |||||||    |||||| | || | |   |||||||||||||||||||||||||||| ||||||||||||||||||||  ||||| |||||    
T  18724235 gtttgatttcatcccctctttgcaggtcacggtcatcaatgaaggtgtggattcccttgtcagtaagagccttgtagagatgaccagtaaaacc 18724328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 28 - 221
Target Start/End: Original strand, 18731554 - 18731747
Alignment:
Q  28 atgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggtagaaaatattggaataaaaattctagattcttcaatggccttgatgagtgatg 127  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| ||||||| |  ||||| || || ||||| ||||||||||| |||  ||||||||    
T  18731554 atgtggacaagttcgtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaatgaagatcctagactcttcaatggcattgtcgagtgatg 18731653  T
Q  128 gtgtgatttcgcttcctcttggaagatgattatcatcaatgaaggtgtggattcccttgttagtaagagccttgtagagatttccagtgaaacc 221  Q
    || |||||||    |||||| | || | |   |||||||||||||||||||||||||||| |||||||||  |||||||||  ||||| |||||    
T  18731654 gtttgatttcatcccctctttgcaggtcacggtcatcaatgaaggtgtggattcccttgtcagtaagagctctgtagagatggccagtaaaacc 18731747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 32 - 221
Target Start/End: Original strand, 18655531 - 18655720
Alignment:
Q  32 ggacaagttcgtccaaacaaaatgaagaagatgcatagttggtagaaaatattggaataaaaattctagattcttcaatggccttgatgagtgatggtgt 131  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||||| |  |||||||| || ||||| |||| |||||| |||  |||||||||| |    
T  18655531 ggacaagttcgtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaataaagatcctagactcttgaatggcattgtcgagtgatggttt 18655630  T
Q  132 gatttcgcttcctcttggaagatgattatcatcaatgaaggtgtggattcccttgttagtaagagccttgtagagatttccagtgaaacc 221  Q
    ||||||    || ||| | || | |   |||||||||||||||||||||||||||| ||||||||| ||||||||||  ||||| |||||    
T  18655631 gatttcatccccactttgcagctcacggtcatcaatgaaggtgtggattcccttgtcagtaagagctttgtagagatgcccagtaaaacc 18655720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 28 - 221
Target Start/End: Original strand, 18699450 - 18699643
Alignment:
Q  28 atgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggtagaaaatattggaataaaaattctagattcttcaatggccttgatgagtgatg 127  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||| ||||||| |  ||||| || || ||||| ||||||||||| |||  ||||||||    
T  18699450 atgtgaacaagttcgtccaaacaaaatgaagaagaggcatagttgatagaaaacacaggaatgaagatcctagactcttcaatggcattgtcgagtgatg 18699549  T
Q  128 gtgtgatttcgcttcctcttggaagatgattatcatcaatgaaggtgtggattcccttgttagtaagagccttgtagagatttccagtgaaacc 221  Q
    || |||||||    || ||| | || | |   |||||||||||||||||||||||||||| ||||||||| ||||||||||  ||||| |||||    
T  18699550 gtttgatttcatccccactttgcaggtcacggtcatcaatgaaggtgtggattcccttgtcagtaagagctttgtagagatggccagtaaaacc 18699643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 28 - 110
Target Start/End: Original strand, 17989103 - 17989185
Alignment:
Q  28 atgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggtagaaaatattggaataaaaattctagattcttcaat 110  Q
    ||||||||||||  |||||||||| ||||||||||||||||||||| ||||||||| ||||| ||||| || |||||||||||    
T  17989103 atgtggacaagtgtgtccaaacaagatgaagaagatgcatagttggcagaaaatatgggaatcaaaatcctggattcttcaat 17989185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 28 - 110
Target Start/End: Complemental strand, 18073886 - 18073804
Alignment:
Q  28 atgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggtagaaaatattggaataaaaattctagattcttcaat 110  Q
    ||||||||||||  |||||||||| ||||||||||||||||||||| ||||||||| ||||| ||||| || |||||||||||    
T  18073886 atgtggacaagtgtgtccaaacaagatgaagaagatgcatagttggcagaaaatatgggaatcaaaatcctggattcttcaat 18073804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 66; Significance: 3e-29; HSPs: 4)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 28 - 221
Target Start/End: Complemental strand, 43090 - 42897
Alignment:
Q  28 atgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggtagaaaatattggaataaaaattctagattcttcaatggccttgatgagtgatg 127  Q
    |||||||||||||||||||| |||||||||||||| ||||| ||| |||| || |  ||||| ||||| ||||| ||||||||||||||||  |||||||    
T  43090 atgtggacaagttcgtccaagcaaaatgaagaagaagcataattgatagacaagacaggaatgaaaatcctagactcttcaatggccttgaaaagtgatg 42991  T
Q  128 gtgtgatttcgcttcctcttggaagatgattatcatcaatgaaggtgtggattcccttgttagtaagagccttgtagagatttccagtgaaacc 221  Q
    |||| |||| |   |||| |||||| |   | ||||||||||||||| | |||||||| |||  |||| | ||||||||||||||||| |||||    
T  42990 gtgttattttgtcacctcctggaagttctctgtcatcaatgaaggtgcgaattcccttcttacaaagatctttgtagagatttccagtaaaacc 42897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 28 - 187
Target Start/End: Complemental strand, 34849 - 34690
Alignment:
Q  28 atgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggtagaaaatattggaataaaaattctagattcttcaatggccttgatgagtgatg 127  Q
    |||||||||||||||||||| |||||||||||||| ||||| ||| |||| || |  ||||| ||||| ||||| ||||||||||||||||  |||||||    
T  34849 atgtggacaagttcgtccaagcaaaatgaagaagaagcataattgatagacaagacaggaatgaaaatcctagactcttcaatggccttgaaaagtgatg 34750  T
Q  128 gtgtgatttcgcttcctcttggaagatgattatcatcaatgaaggtgtggattcccttgt 187  Q
    |||| |||||   ||||| | |||| |   | ||||||||||||||||||||||||||||    
T  34749 gtgttatttcatctcctccttgaagctccctgtcatcaatgaaggtgtggattcccttgt 34690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 28 - 221
Target Start/End: Complemental strand, 27572 - 27379
Alignment:
Q  28 atgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggtagaaaatattggaataaaaattctagattcttcaatggccttgatgagtgatg 127  Q
    |||||||||||||||||||| |||||||||||||| ||||| ||| |||| || |  ||||| ||||| ||||||||||||||| ||||||  |||||||    
T  27572 atgtggacaagttcgtccaagcaaaatgaagaagaagcataattgatagacaagacaggaatgaaaatcctagattcttcaatgaccttgaaaagtgatg 27473  T
Q  128 gtgtgatttcgcttcctcttggaagatgattatcatcaatgaaggtgtggattcccttgttagtaagagccttgtagagatttccagtgaaacc 221  Q
     ||| |||||    |||| | |||| |   ||||||||| ||| ||||| |||||||| |||  |||| |  |||||||||||||||| |||||    
T  27472 atgttatttcatcacctccttgaagctctctatcatcaaagaatgtgtgaattcccttcttacaaagatcactgtagagatttccagtaaaacc 27379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #4
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 28 - 221
Target Start/End: Complemental strand, 116920 - 116727
Alignment:
Q  28 atgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggtagaaaatattggaataaaaattctagattcttcaatggccttgatgagtgatg 127  Q
    |||||||||||||| ||||| ||||| |||||||| ||||| ||| |||| || || ||||| ||||| ||||| ||||||||||||||||  ||||| |    
T  116920 atgtggacaagttcatccaagcaaaaggaagaagaagcataattgatagacaaaataggaatgaaaatcctagactcttcaatggccttgaaaagtgacg 116821  T
Q  128 gtgtgatttcgcttcctcttggaagatgattatcatcaatgaaggtgtggattcccttgttagtaagagccttgtagagatttccagtgaaacc 221  Q
    |||| ||||||   |||| | |||| |  || ||||||||||||||  | |||| |||  ||  |||| | ||||||||||||||||| |||||    
T  116820 gtgttatttcgtcacctcgttgaaggtctttgtcatcaatgaaggtacgaattctcttcctacaaagatctttgtagagatttccagtaaaacc 116727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 28 - 221
Target Start/End: Original strand, 58345 - 58538
Alignment:
Q  28 atgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggtagaaaatattggaataaaaattctagattcttcaatggccttgatgagtgatg 127  Q
    |||||||||||||||| ||| |||||||||||||| ||||||||| |||| || |  ||||| ||||| ||||| |||| |||||||||||  |||||||    
T  58345 atgtggacaagttcgttcaagcaaaatgaagaagaagcatagttgatagacaagacgggaatgaaaatcctagactctttaatggccttgaaaagtgatg 58444  T
Q  128 gtgtgatttcgcttcctcttggaagatgattatcatcaatgaaggtgtggattcccttgttagtaagagccttgtagagatttccagtgaaacc 221  Q
    |||| ||||||   |||| | |||| |   | ||||| ||||||||  |||||||||||| |  ||||||  |||||||||||||||| |||||    
T  58445 gtgttatttcgtcacctccttgaagctctctgtcatccatgaaggttcggattcccttgtcacaaagagctctgtagagatttccagtaaaacc 58538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 28 - 110
Target Start/End: Complemental strand, 59694 - 59612
Alignment:
Q  28 atgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggtagaaaatattggaataaaaattctagattcttcaat 110  Q
    ||||||||||||  |||||||||| ||||||||||||||||||||| ||||||||| ||||| ||||| || |||||||||||    
T  59694 atgtggacaagtgtgtccaaacaagatgaagaagatgcatagttggcagaaaatatgggaatcaaaatcctggattcttcaat 59612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 28 - 137
Target Start/End: Complemental strand, 3279812 - 3279703
Alignment:
Q  28 atgtggacaagttcgtccaaacaaaatgaagaagatgcatagttggtagaaaatattggaataaaaattctagattcttcaatggccttgatgagtgatg 127  Q
    |||||||||||||||||||||||||||  |||||| ||||||||| |||| || |  |||||||||||  | || ||||| ||||||||||  ||||||     
T  3279812 atgtggacaagttcgtccaaacaaaatatagaagaagcatagttgatagagaagaccggaataaaaatcatggactcttcgatggccttgacaagtgatt 3279713  T
Q  128 gtgtgatttc 137  Q
    ||||||||||    
T  3279712 gtgtgatttc 3279703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 28 - 70
Target Start/End: Original strand, 17993747 - 17993789
Alignment:
Q  28 atgtggacaagttcgtccaaacaaaatgaagaagatgcatagt 70  Q
    ||||||||||||||||| ||||||||||||||||| |||||||    
T  17993747 atgtggacaagttcgtctaaacaaaatgaagaagaagcatagt 17993789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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