View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10083_low_2 (Length: 319)
Name: NF10083_low_2
Description: NF10083
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10083_low_2 |
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Alignment Details
Target: chr7 (Bit Score: 282; Significance: 1e-158; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 1 - 318
Target Start/End: Complemental strand, 43709392 - 43709076
Alignment:
| Q |
1 |
tagcgttggacatggagaggcttaatatcaaattggctactcttgaggtagctcttaacatagcaagagacttgttgatggaagaaggcttcaatgggat |
100 |
Q |
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| T |
43709392 |
tagcgttggaaatggagaggcttaagacaaaattggctactcttgaggtagatcttaacatagcaagagacttgttgatggaagaaggcttcaatgggat |
43709293 |
T |
|
| Q |
101 |
agatttgaatgttgaactaggatatgggataccatagacctctttctctacattaacatgcatgtttatatggatggatttttaatgtcttgaataaatt |
200 |
Q |
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| T |
43709292 |
agatttgaatgttgaactaggatatgggataccatagacctctttctctacattaatatgcatgtttatatggatggatttttaatgtcttgaataaatt |
43709193 |
T |
|
| Q |
201 |
gtgactgcttgtctatctctctaataatacaatgttattgcagattcatctgttgacaaccgtaagtctttttattatatatattcaactattgttcatt |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| |
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| T |
43709192 |
gtgactgcttgtctatctctctaataatacaatgttattgcagattcatctgttgacaactg-aagtctttttattatatatattcaactattgttcatt |
43709094 |
T |
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| Q |
301 |
gttcaatgcgtattgttg |
318 |
Q |
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|||||||||||||||||| |
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| T |
43709093 |
gttcaatgcgtattgttg |
43709076 |
T |
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