View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend |
| Query |
| Query hiting target |
| Query hiting target's complemental strand |
| Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10084_high_1 (Length: 422)
Name: NF10084_high_1
Description: NF10084
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[»] NF10084_high_1 |
 |  |
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[»] scaffold0306 (1 HSPs) |
 |  |  |
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[»] scaffold0152 (1 HSPs) |
 |  |  |
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[»] scaffold0140 (1 HSPs) |
 |  |  |
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[»] scaffold0025 (1 HSPs) |
 |  |  |
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[»] scaffold0302 (1 HSPs) |
 |  |  |
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[»] scaffold0121 (1 HSPs) |
 |  |  |
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[»] scaffold0532 (1 HSPs) |
 |  |  |
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[»] scaffold1248 (1 HSPs) |
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[»] scaffold0952 (1 HSPs) |
 |  |  |
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Alignment Details
Target: chr2 (Bit Score: 134; Significance: 1e-69; HSPs: 22)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 8 - 178
Target Start/End: Complemental strand, 6974689 - 6974519
Alignment:
Q |
8 |
gagcagagaagttattagaataaattttatagnnnnnnntgagagatttttctgaaaatgtaaagttacaaaattaaatgaccctgtttgaaatagtttt |
107 |
Q |
|
|
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
6974689 |
gagcagagaagttattagaataaattttatagaaaaacatgagagatttttctgaaaatgtaaagttacaaaattaaatgaccctgtttgaaatagtttt |
6974590 |
T |
 |
Q |
108 |
tattttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagttttagt |
178 |
Q |
|
|
| ||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||||||||||| |
|
|
T |
6974589 |
tgttttcagtttttgaaatatataagtgctcttctcacaatagttatcattttacatgttttagttttagt |
6974519 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 326 - 405
Target Start/End: Complemental strand, 6974362 - 6974283
Alignment:
Q |
326 |
ggcaatataaagggttttgcaagagcttatttgaatttttctcctgacatgaatattttaaatatttagaacaacttact |
405 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
6974362 |
ggcaatataaagggttttgcaagagcttatttgaatttttctcctgacatgaatattttaaatatttagaacaacttact |
6974283 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 97 - 178
Target Start/End: Original strand, 4382213 - 4382294
Alignment:
Q |
97 |
gaaatagtttttattttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagttttagt |
178 |
Q |
|
|
|||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
T |
4382213 |
gaaatagtttttgttttcagtttttgaaatatacaagttctcttctcacaatagttatcattttacatgttttagttttagt |
4382294 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 37060169 - 37060079
Alignment:
Q |
90 |
cctgtttgaaatagtttttattttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagttttagttc |
180 |
Q |
|
|
||||||||||||||||||| ||||||||||||||||||| || | ||| |||||||||||||||| |||||||||||||||||||||||| |
|
|
T |
37060169 |
cctgtttgaaatagtttttgttttcagtttttgaaatatacaaatcctcttctcacaatagttatccttttacatgttttagttttagttc |
37060079 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 90 - 178
Target Start/End: Original strand, 21423364 - 21423452
Alignment:
Q |
90 |
cctgtttgaaatagtttttattttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagttttagt |
178 |
Q |
|
|
||||||||||||||||||| ||||||||||||||||||| |||| ||||||||||||||||||| | |||||||||||||||||||| |
|
|
T |
21423364 |
cctgtttgaaatagtttttgttttcagtttttgaaatatacaagtcttcatctcacaatagttatcctattacatgttttagttttagt |
21423452 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 92 - 178
Target Start/End: Original strand, 27004450 - 27004536
Alignment:
Q |
92 |
tgtttgaaatagtttttattttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagttttagt |
178 |
Q |
|
|
||||||||||||||||| |||||| |||||||||||| ||||| ||| |||||||||||||||| ||||| |||||||||||||||| |
|
|
T |
27004450 |
tgtttgaaatagtttttgttttcaatttttgaaatatataagtcctcttctcacaatagttatccttttatatgttttagttttagt |
27004536 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 90 - 178
Target Start/End: Original strand, 5958965 - 5959053
Alignment:
Q |
90 |
cctgtttgaaatagtttttattttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagttttagt |
178 |
Q |
|
|
||||||||||||||||||| ||||||||||||||||||| |||| ||| |||| |||||||||| |||||||||||||||||||||| |
|
|
T |
5958965 |
cctgtttgaaatagtttttgttttcagtttttgaaatatacaagtcctcttctcgtaatagttatccttttacatgttttagttttagt |
5959053 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 93 - 178
Target Start/End: Complemental strand, 30609773 - 30609688
Alignment:
Q |
93 |
gtttgaaatagtttttattttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagttttagt |
178 |
Q |
|
|
||||||||| |||||| ||||||||| ||||||||| |||| || ||||||||||||||||||||||||||||||||||||||| |
|
|
T |
30609773 |
gtttgaaatcgtttttgttttcagttattgaaatatacaagtcttcttctcacaatagttatcattttacatgttttagttttagt |
30609688 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 92 - 180
Target Start/End: Complemental strand, 10217443 - 10217355
Alignment:
Q |
92 |
tgtttgaaatagtttttattttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagttttagttc |
180 |
Q |
|
|
||||||||||||||||||||||||||||||||||||| |||||| | | | | ||||||||| |||||||||||||||||||||||| |
|
|
T |
10217443 |
tgtttgaaatagtttttattttcagtttttgaaatatacaagttccctttttagaatagttattcttttacatgttttagttttagttc |
10217355 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 90 - 178
Target Start/End: Original strand, 13274200 - 13274287
Alignment:
Q |
90 |
cctgtttgaaatagtttttattttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagttttagt |
178 |
Q |
|
|
||||||||||||||||||| |||| | |||||||||||| |||| ||| |||||||||||||||| |||||||||||||||||||||| |
|
|
T |
13274200 |
cctgtttgaaatagtttttgtttttaatttttgaaatatacaagtcctcttctcacaatagttatc-ttttacatgttttagttttagt |
13274287 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 90 - 176
Target Start/End: Complemental strand, 24476022 - 24475936
Alignment:
Q |
90 |
cctgtttgaaatagtttttattttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagtttta |
176 |
Q |
|
|
||||||||||||||||||| ||||||||||||||||||| || | || | |||||||||||||| |||||||||||||||||||| |
|
|
T |
24476022 |
cctgtttgaaatagtttttgttttcagtttttgaaatatacaaatcttcttatcacaatagttatctttttacatgttttagtttta |
24475936 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 90 - 176
Target Start/End: Complemental strand, 28107578 - 28107492
Alignment:
Q |
90 |
cctgtttgaaatagtttttattttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagtttta |
176 |
Q |
|
|
||||||||||| | ||||| ||||||||||||||||||| || | ||| |||||||||||||||| |||||||||||||||||||| |
|
|
T |
28107578 |
cctgtttgaaacaatttttgttttcagtttttgaaatatacaaatcctcttctcacaatagttatccttttacatgttttagtttta |
28107492 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 95 - 178
Target Start/End: Complemental strand, 15070475 - 15070392
Alignment:
Q |
95 |
ttgaaatagtttttattttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagttttagt |
178 |
Q |
|
|
|||||||||||||| ||||||||||||||||||| || | ||| |||||||||||||||| ||||| ||||||| |||||||| |
|
|
T |
15070475 |
ttgaaatagtttttgttttcagtttttgaaatatacaaatcctcttctcacaatagttatccttttatatgtttttgttttagt |
15070392 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 90 - 178
Target Start/End: Complemental strand, 37140224 - 37140129
Alignment:
Q |
90 |
cctgtttgaaatagtttttattttcagtttttgaaatatgtaagttctcatctcacaatagtt-------atcattttacatgttttagttttagt |
178 |
Q |
|
|
||||||||||||||||||| ||||||||||||||||||| |||| ||| |||| |||||||| |||||||||||||||||||||||||| |
|
|
T |
37140224 |
cctgtttgaaatagtttttgttttcagtttttgaaatatacaagtcctcttctcgcaatagttatcacttatcattttacatgttttagttttagt |
37140129 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 92 - 175
Target Start/End: Complemental strand, 30393680 - 30393597
Alignment:
Q |
92 |
tgtttgaaatagtttttattttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagtttt |
175 |
Q |
|
|
||||||||||||||||| ||||||||||||||||||| |||| ||| | | | ||| |||||| ||||||||||||||||||| |
|
|
T |
30393680 |
tgtttgaaatagtttttgttttcagtttttgaaatatacaagtcctcttttgataatggttatccttttacatgttttagtttt |
30393597 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 91 - 178
Target Start/End: Complemental strand, 37802925 - 37802838
Alignment:
Q |
91 |
ctgtttgaaatagtttttattttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagttttagt |
178 |
Q |
|
|
|||||||||||||||||| |||| | |||||||||||| |||| || ||||| |||| ||||| |||||||||||||||||||||| |
|
|
T |
37802925 |
ctgtttgaaatagtttttgttttaaatttttgaaatatacaagtcttcttctcataatatttatctttttacatgttttagttttagt |
37802838 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 92 - 178
Target Start/End: Complemental strand, 5807407 - 5807322
Alignment:
Q |
92 |
tgtttgaaatagtttttattttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagttttagt |
178 |
Q |
|
|
||||||||||||||||| ||| ||||||||||||||| || ||| | | |||||||||||||| ||||| |||||||||||||||| |
|
|
T |
5807407 |
tgtttgaaatagtttttgttt-cagtttttgaaatatacaaattcccttttcacaatagttatccttttatatgttttagttttagt |
5807322 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 178
Target Start/End: Original strand, 14786239 - 14786321
Alignment:
Q |
90 |
cctgtttgaaatagtttttattttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagttttagt |
178 |
Q |
|
|
||||||||||||||||||| ||||| |||||||| |||| ||| |||||||||||||||| | |||||||||||||||||||| |
|
|
T |
14786239 |
cctgtttgaaatagtttttgttttc------tgaaatatacaagtcctcttctcacaatagttatcctattacatgttttagttttagt |
14786321 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 92 - 172
Target Start/End: Complemental strand, 22194371 - 22194291
Alignment:
Q |
92 |
tgtttgaaatagtttttattttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagt |
172 |
Q |
|
|
||||||||||||||||| |||| ||||||||||||| |||| || | | | ||||||||||||||||||||||||||| |
|
|
T |
22194371 |
tgtttgaaatagtttttgtttttggtttttgaaatatacaagtcctttttttataatagttatcattttacatgttttagt |
22194291 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 115 - 179
Target Start/End: Original strand, 27969511 - 27969575
Alignment:
Q |
115 |
agtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagttttagtt |
179 |
Q |
|
|
|||||||||||||| |||||| | |||||||||||||||| ||||| |||||||| |||||||| |
|
|
T |
27969511 |
agtttttgaaatatacaagttcacttctcacaatagttatccttttatatgttttaattttagtt |
27969575 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 119 - 178
Target Start/End: Complemental strand, 7748006 - 7747947
Alignment:
Q |
119 |
tttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagttttagt |
178 |
Q |
|
|
|||||||||| |||| ||| ||| |||| |||||||||||||||||||||||||||||| |
|
|
T |
7748006 |
tttgaaatatacaagtcctcttcttacaagagttatcattttacatgttttagttttagt |
7747947 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 131 - 178
Target Start/End: Complemental strand, 30757233 - 30757186
Alignment:
Q |
131 |
aagttctcatctcacaatagttatcattttacatgttttagttttagt |
178 |
Q |
|
|
|||| ||| |||||||||||||||| |||||||||||||||||||||| |
|
|
T |
30757233 |
aagtcctcttctcacaatagttatccttttacatgttttagttttagt |
30757186 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 69; Significance: 8e-31; HSPs: 14)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 90 - 178
Target Start/End: Original strand, 35929706 - 35929794
Alignment:
Q |
90 |
cctgtttgaaatagtttttattttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagttttagt |
178 |
Q |
|
|
||||||||||||||||||| ||||||||||||||||||| ||||| ||| |||||||||||||||||||||| |||||||||||||||| |
|
|
T |
35929706 |
cctgtttgaaatagtttttgttttcagtttttgaaatatataagtcctcttctcacaatagttatcattttatatgttttagttttagt |
35929794 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 93 - 178
Target Start/End: Original strand, 21555382 - 21555467
Alignment:
Q |
93 |
gtttgaaatagtttttattttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagttttagt |
178 |
Q |
|
|
|||||||||||||||| ||||||||||||||||||| ||||| || |||||||||||||||| |||||||||||||||||||||| |
|
|
T |
21555382 |
gtttgaaatagtttttgttttcagtttttgaaatatataagtcttcttctcacaatagttatccttttacatgttttagttttagt |
21555467 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 92 - 174
Target Start/End: Complemental strand, 56100226 - 56100144
Alignment:
Q |
92 |
tgtttgaaatagtttttattttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagttt |
174 |
Q |
|
|
||||||||||||||||| ||||||||||||||||||| |||| ||| |||| ||||||||||| |||||||||||||||||| |
|
|
T |
56100226 |
tgtttgaaatagtttttgttttcagtttttgaaatatacaagtcctcttctcgcaatagttatccttttacatgttttagttt |
56100144 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 90 - 178
Target Start/End: Complemental strand, 36609504 - 36609415
Alignment:
Q |
90 |
cctgtttgaaatagtttttatttt-cagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagttttagt |
178 |
Q |
|
|
||||||||||||||||||| |||| ||||||||||||||| || | ||| |||||||||||||||| |||||||||||||||||||||| |
|
|
T |
36609504 |
cctgtttgaaatagtttttgtttttcagtttttgaaatatacaaatcctcttctcacaatagttatccttttacatgttttagttttagt |
36609415 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 93 - 178
Target Start/End: Original strand, 12701040 - 12701125
Alignment:
Q |
93 |
gtttgaaatagtttttattttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagttttagt |
178 |
Q |
|
|
|||||||||||||||| ||||||||||||||||||| |||| || ||| ||||||||||| |||||||||||||||||||||| |
|
|
T |
12701040 |
gtttgaaatagtttttgttttcagtttttgaaatatacaagtcttcttcttacaatagttattcttttacatgttttagttttagt |
12701125 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 102 - 178
Target Start/End: Original strand, 827840 - 827916
Alignment:
Q |
102 |
agtttttattttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagttttagt |
178 |
Q |
|
|
||||||| ||||| ||||||||||||| |||| ||| |||||||||||||||| |||||||||||||||||||||| |
|
|
T |
827840 |
agtttttgttttcggtttttgaaatatacaagtcctcttctcacaatagttatctttttacatgttttagttttagt |
827916 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 90 - 178
Target Start/End: Original strand, 23249469 - 23249557
Alignment:
Q |
90 |
cctgtttgaaatagtttttattttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagttttagt |
178 |
Q |
|
|
||||||||||| | ||||| ||||| ||||||||||||| ||| ||| |||||||||||||||| |||||||||||||||||||||| |
|
|
T |
23249469 |
cctgtttgaaacaatttttgttttcggtttttgaaatatacaagccctcttctcacaatagttatccttttacatgttttagttttagt |
23249557 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 91 - 178
Target Start/End: Original strand, 19598367 - 19598454
Alignment:
Q |
91 |
ctgtttgaaatagtttttattttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagttttagt |
178 |
Q |
|
|
|||||||||||||||||| ||||||||||| ||||||| |||| | ||||| ||||||| || |||||||||||||||||||||| |
|
|
T |
19598367 |
ctgtttgaaatagtttttgttttcagttttcgaaatatacaagtcattttctcaaaatagttttctttttacatgttttagttttagt |
19598454 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 91 - 178
Target Start/End: Original strand, 35749385 - 35749472
Alignment:
Q |
91 |
ctgtttgaaatagtttttattttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagttttagt |
178 |
Q |
|
|
|||||||||||| |||||||||||| |||||||||||| |||| || ||||| |||| ||||| ||||| |||||||||||||||| |
|
|
T |
35749385 |
ctgtttgaaataatttttattttcaatttttgaaatatacaagtcatcttctcataataattatctttttatatgttttagttttagt |
35749472 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 92 - 175
Target Start/End: Original strand, 41842789 - 41842871
Alignment:
Q |
92 |
tgtttgaaatagtttttattttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagtttt |
175 |
Q |
|
|
||||||||||||||||| ||||| ||||||||||||| || | || ||||||||| |||||| ||||||||||||||||||| |
|
|
T |
41842789 |
tgtttgaaatagtttttgttttcggtttttgaaatatacaaatccttttctcacaattgttatc-ttttacatgttttagtttt |
41842871 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 116 - 178
Target Start/End: Original strand, 27733401 - 27733463
Alignment:
Q |
116 |
gtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagttttagt |
178 |
Q |
|
|
||||||||||||| ||| ||| |||||||||||||||| |||||||||||||||||||||| |
|
|
T |
27733401 |
gtttttgaaatatacaagacctcttctcacaatagttatccttttacatgttttagttttagt |
27733463 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 90 - 178
Target Start/End: Complemental strand, 44243786 - 44243698
Alignment:
Q |
90 |
cctgtttgaaatagtttttattttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagttttagt |
178 |
Q |
|
|
||||||||||||| |||| |||| |||||||||||||| |||| || ||| |||||||||||| ||||| |||||||| ||||||| |
|
|
T |
44243786 |
cctgtttgaaataaattttgtttttagtttttgaaatatacaagtcatcttcttacaatagttatccttttatatgttttaattttagt |
44243698 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 128
Target Start/End: Complemental strand, 53584654 - 53584618
Alignment:
Q |
92 |
tgtttgaaatagtttttattttcagtttttgaaatat |
128 |
Q |
|
|
||||||||||||||||| ||||||||||||||||||| |
|
|
T |
53584654 |
tgtttgaaatagtttttgttttcagtttttgaaatat |
53584618 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 140 - 178
Target Start/End: Complemental strand, 53583511 - 53583473
Alignment:
Q |
140 |
tctcacaatagttatcattttacatgttttagttttagt |
178 |
Q |
|
|
|||||||||||| ||| |||||||||||||||||||||| |
|
|
T |
53583511 |
tctcacaatagtaatccttttacatgttttagttttagt |
53583473 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0306 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0306
Description:
Target: scaffold0306; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 90 - 178
Target Start/End: Complemental strand, 13146 - 13058
Alignment:
Q |
90 |
cctgtttgaaatagtttttattttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagttttagt |
178 |
Q |
|
|
||||||||||||||||||| ||||||||||||||||||| |||| ||| |||||||||||||||| |||||||||||||||||||||| |
|
|
T |
13146 |
cctgtttgaaatagtttttgttttcagtttttgaaatatacaagtcctcttctcacaatagttatccttttacatgttttagttttagt |
13058 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0152 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0152
Description:
Target: scaffold0152; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 90 - 178
Target Start/End: Original strand, 22181 - 22269
Alignment:
Q |
90 |
cctgtttgaaatagtttttattttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagttttagt |
178 |
Q |
|
|
||||||||||||||||||| ||||||||||||||||||| |||| ||| |||||||||||||||| |||||||||||||||||||||| |
|
|
T |
22181 |
cctgtttgaaatagtttttgttttcagtttttgaaatatacaagtcctcttctcacaatagttatccttttacatgttttagttttagt |
22269 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 65; Significance: 2e-28; HSPs: 11)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 94 - 178
Target Start/End: Complemental strand, 2814976 - 2814892
Alignment:
Q |
94 |
tttgaaatagtttttattttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagttttagt |
178 |
Q |
|
|
||||||||||||||| ||||||||||||||||||| |||| ||| ||||||||||||||||||||||||||||||||||||||| |
|
|
T |
2814976 |
tttgaaatagtttttgttttcagtttttgaaatatacaagtcctcttctcacaatagttatcattttacatgttttagttttagt |
2814892 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 90 - 178
Target Start/End: Complemental strand, 6200252 - 6200164
Alignment:
Q |
90 |
cctgtttgaaatagtttttattttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagttttagt |
178 |
Q |
|
|
||||||||||||| ||||| ||||||||||||||||||| || ||||| |||||||||||||||| |||||||| ||||||||||||| |
|
|
T |
6200252 |
cctgtttgaaatattttttgttttcagtttttgaaatatacaaattctcttctcacaatagttatccttttacatattttagttttagt |
6200164 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 92 - 178
Target Start/End: Original strand, 444522 - 444608
Alignment:
Q |
92 |
tgtttgaaatagtttttattttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagttttagt |
178 |
Q |
|
|
||||| ||||||||||| ||||||||||||||||||| |||| ||| |||||||||||||||| | |||||||||||||||||||| |
|
|
T |
444522 |
tgtttaaaatagtttttgttttcagtttttgaaatatacaagtcctcttctcacaatagttatcctattacatgttttagttttagt |
444608 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 91 - 176
Target Start/End: Original strand, 23774069 - 23774154
Alignment:
Q |
91 |
ctgtttgaaatagtttttattttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagtttta |
176 |
Q |
|
|
||||||||||||||||||||||| | |||||||||||| |||||||| ||||| |||||||||| ||||| |||||||||||||| |
|
|
T |
23774069 |
ctgtttgaaatagtttttatttttaatttttgaaatatacaagttctcttctcataatagttatccttttatatgttttagtttta |
23774154 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 94 - 178
Target Start/End: Complemental strand, 24640438 - 24640354
Alignment:
Q |
94 |
tttgaaatagtttttattttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagttttagt |
178 |
Q |
|
|
||||||||||||||| |||||||||||||||||||| |||| ||| ||||| |||||||||| || || |||||||||||||||| |
|
|
T |
24640438 |
tttgaaatagtttttgttttcagtttttgaaatatgcaagtcctcttctcataatagttatccttctatatgttttagttttagt |
24640354 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 92 - 178
Target Start/End: Original strand, 1067801 - 1067888
Alignment:
Q |
92 |
tgtttgaaatagtttttattttcagtttttgaaatatgtaagttctcatctcacaatagtta-tcattttacatgttttagttttagt |
178 |
Q |
|
|
||||||||||||||||| ||||||||||||||||||| |||||||| |||||||||||||| | ||||| |||||||||||||||| |
|
|
T |
1067801 |
tgtttgaaatagtttttgttttcagtttttgaaatatacaagttctcttctcacaatagttaccctttttatatgttttagttttagt |
1067888 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 94 - 178
Target Start/End: Complemental strand, 26394075 - 26393991
Alignment:
Q |
94 |
tttgaaatagtttttattttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagttttagt |
178 |
Q |
|
|
||||||||||||||| ||||||||||||||||||| || | || |||| ||||| |||||||||||||||||||||||||||| |
|
|
T |
26394075 |
tttgaaatagtttttgttttcagtttttgaaatataaaaatcttcttctcgcaatatttatcattttacatgttttagttttagt |
26393991 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 109 - 172
Target Start/End: Complemental strand, 2993655 - 2993592
Alignment:
Q |
109 |
attttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagt |
172 |
Q |
|
|
||||| |||||||||||||| |||||||| |||||||||||||||| ||||| || ||||||| |
|
|
T |
2993655 |
atttttagtttttgaaatatacaagttctcttctcacaatagttatccttttatatcttttagt |
2993592 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 115 - 178
Target Start/End: Original strand, 34710135 - 34710198
Alignment:
Q |
115 |
agtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagttttagt |
178 |
Q |
|
|
|||||||||||||| |||||||| ||||||| ||||||| ||||| |||||||||||||||| |
|
|
T |
34710135 |
agtttttgaaatatacaagttctcttctcacagtagttattcttttatatgttttagttttagt |
34710198 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 140 - 178
Target Start/End: Complemental strand, 4032367 - 4032329
Alignment:
Q |
140 |
tctcacaatagttatcattttacatgttttagttttagt |
178 |
Q |
|
|
|||||||||||||||| ||||| |||||||||||||||| |
|
|
T |
4032367 |
tctcacaatagttatctttttatatgttttagttttagt |
4032329 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 90 - 128
Target Start/End: Original strand, 12324171 - 12324209
Alignment:
Q |
90 |
cctgtttgaaatagtttttattttcagtttttgaaatat |
128 |
Q |
|
|
|||||||||| |||||||| ||||||||||||||||||| |
|
|
T |
12324171 |
cctgtttgaagtagtttttgttttcagtttttgaaatat |
12324209 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 65; Significance: 2e-28; HSPs: 18)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 90 - 178
Target Start/End: Original strand, 41929340 - 41929428
Alignment:
Q |
90 |
cctgtttgaaatagtttttattttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagttttagt |
178 |
Q |
|
|
||||||||||||||||||| |||||||||||||||||||| |||||||| | || ||||||||||| |||||||||||||||||||||| |
|
|
T |
41929340 |
cctgtttgaaatagtttttgttttcagtttttgaaatatgcaagttctcttttcgcaatagttatccttttacatgttttagttttagt |
41929428 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 90 - 178
Target Start/End: Complemental strand, 3729423 - 3729335
Alignment:
Q |
90 |
cctgtttgaaatagtttttattttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagttttagt |
178 |
Q |
|
|
||||||||||||||||||| ||||||||||||||||||| |||| ||| |||||||||| ||||| |||||||||||||||||||||| |
|
|
T |
3729423 |
cctgtttgaaatagtttttgttttcagtttttgaaatatacaagtcctcttctcacaataattatccttttacatgttttagttttagt |
3729335 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 92 - 176
Target Start/End: Original strand, 9913803 - 9913887
Alignment:
Q |
92 |
tgtttgaaatagtttttattttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagtttta |
176 |
Q |
|
|
||||||||||||||||| |||| |||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||| |
|
|
T |
9913803 |
tgtttgaaatagtttttgtttttagtttttgaaatatacaagttctcatctcataatagttatctttttacatgttttagtttta |
9913887 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 92 - 178
Target Start/End: Complemental strand, 20736246 - 20736160
Alignment:
Q |
92 |
tgtttgaaatagtttttattttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagttttagt |
178 |
Q |
|
|
||||||||||||||||| |||||| ||||||||| || ||||| ||| | ||||||||||||||||||||||||||||||||||||| |
|
|
T |
20736246 |
tgtttgaaatagtttttgttttcaatttttgaaaaatataagtcctcctttcacaatagttatcattttacatgttttagttttagt |
20736160 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 90 - 178
Target Start/End: Complemental strand, 34766974 - 34766886
Alignment:
Q |
90 |
cctgtttgaaatagtttttattttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagttttagt |
178 |
Q |
|
|
||||||||||||||||||| |||||| |||||||||||| |||| ||| ||||||||||||||| |||||||||||||||||||||| |
|
|
T |
34766974 |
cctgtttgaaatagtttttgttttcaatttttgaaatatacaagtcctcttctcacaatagttattcttttacatgttttagttttagt |
34766886 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 91 - 178
Target Start/End: Complemental strand, 8159159 - 8159072
Alignment:
Q |
91 |
ctgtttgaaatagtttttattttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagttttagt |
178 |
Q |
|
|
|||||||||||||||||| |||||| |||||||||||| |||| ||| |||||||||| ||||| |||||||||||||||||||||| |
|
|
T |
8159159 |
ctgtttgaaatagtttttgttttcaatttttgaaatatacaagtcctcttctcacaataattatccttttacatgttttagttttagt |
8159072 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 95 - 178
Target Start/End: Original strand, 21583853 - 21583936
Alignment:
Q |
95 |
ttgaaatagtttttattttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagttttagt |
178 |
Q |
|
|
|||||||||||||| ||||||||||||||||||| |||| || ||||| |||||||||| |||||||||||||||||||||| |
|
|
T |
21583853 |
ttgaaatagtttttgttttcagtttttgaaatatacaagtcatcttctcataatagttatctttttacatgttttagttttagt |
21583936 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 92 - 178
Target Start/End: Complemental strand, 39508404 - 39508318
Alignment:
Q |
92 |
tgtttgaaatagtttttattttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagttttagt |
178 |
Q |
|
|
||||||||||||||||| ||||||||||||||||||| |||| | ||||||||||||||| |||||||||||||||||||||| |
|
|
T |
39508404 |
tgtttgaaatagtttttgttttcagtttttgaaatatacaagtctttttctcacaatagttattcttttacatgttttagttttagt |
39508318 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 94 - 178
Target Start/End: Original strand, 21020686 - 21020770
Alignment:
Q |
94 |
tttgaaatagtttttattttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagttttagt |
178 |
Q |
|
|
||||||||||||||| ||||||||||||||||||| ||||| || |||| ||||||||||| ||||| ||| |||||||||||| |
|
|
T |
21020686 |
tttgaaatagtttttgttttcagtttttgaaatatataagtcttcttctcgcaatagttatccttttatatgatttagttttagt |
21020770 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 93 - 178
Target Start/End: Complemental strand, 9793722 - 9793637
Alignment:
Q |
93 |
gtttgaaatagtttttattttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagttttagt |
178 |
Q |
|
|
|||||||||||||||| ||||||||||||||||||| || | | | | | |||||||||||| |||||||||||||||||||||| |
|
|
T |
9793722 |
gtttgaaatagtttttgttttcagtttttgaaatatacaaatcccctttttacaatagttatccttttacatgttttagttttagt |
9793637 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 90 - 178
Target Start/End: Complemental strand, 9793822 - 9793734
Alignment:
Q |
90 |
cctgtttgaaatagtttttattttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagttttagt |
178 |
Q |
|
|
||||||||||||||||||| ||||||||||||||||||| || | | | | | |||||||||||| |||||| ||||||||||||||| |
|
|
T |
9793822 |
cctgtttgaaatagtttttgttttcagtttttgaaatatacaaatcccctttttacaatagttatccttttacttgttttagttttagt |
9793734 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 92 - 176
Target Start/End: Original strand, 3711183 - 3711271
Alignment:
Q |
92 |
tgtttgaaatagtttttattttcagtttttgaaatatgt----aagttctcatctcacaatagttatcattttacatgttttagtttta |
176 |
Q |
|
|
||||||||||||||||| ||||||||||||||||||| | ||||||| | |||||||||||||| ||||||||||||||| |||| |
|
|
T |
3711183 |
tgtttgaaatagtttttgttttcagtttttgaaatatatatacaagttctattttcacaatagttatctttttacatgttttagattta |
3711271 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 90 - 169
Target Start/End: Original strand, 25081766 - 25081845
Alignment:
Q |
90 |
cctgtttgaaatagtttttattttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgtttt |
169 |
Q |
|
|
||||||||||||||||||| ||||||| ||||||||||| ||| || |||||||||||||||||||||| ||||||| |
|
|
T |
25081766 |
cctgtttgaaatagtttttgttttcaggttttgaaatatacaagccatcttctcacaatagttatcattttatatgtttt |
25081845 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 90 - 169
Target Start/End: Original strand, 25139735 - 25139814
Alignment:
Q |
90 |
cctgtttgaaatagtttttattttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgtttt |
169 |
Q |
|
|
||||||||||||||||||| ||||||| ||||||||||| ||| || |||||||||||||||||||||| ||||||| |
|
|
T |
25139735 |
cctgtttgaaatagtttttgttttcaggttttgaaatatacaagccatcttctcacaatagttatcattttatatgtttt |
25139814 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 91 - 178
Target Start/End: Original strand, 2068963 - 2069046
Alignment:
Q |
91 |
ctgtttgaaatagtttttattttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagttttagt |
178 |
Q |
|
|
|||||||||||||||||| |||||||||||||||||| ||||| || |||||||||| ||||| |||| |||||||||||||||| |
|
|
T |
2068963 |
ctgtttgaaatagtttttgttttcagtttttgaaata--taagtcttcttctcacaatatttatcttttt--atgttttagttttagt |
2069046 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 98 - 174
Target Start/End: Original strand, 20815677 - 20815753
Alignment:
Q |
98 |
aaatagtttttattttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagttt |
174 |
Q |
|
|
||||||||||| |||||||||||| |||||| |||| || |||||||||||||||||||||| ||||||| |||| |
|
|
T |
20815677 |
aaatagtttttgttttcagtttttaaaatatacaagtccttttctcacaatagttatcattttatatgtttttgttt |
20815753 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 117 - 178
Target Start/End: Complemental strand, 41910281 - 41910220
Alignment:
Q |
117 |
tttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagttttagt |
178 |
Q |
|
|
||||| |||||| |||| ||| | ||||||||||||||||||||||||||||||||||||| |
|
|
T |
41910281 |
tttttaaaatatacaagtcctcttttcacaatagttatcattttacatgttttagttttagt |
41910220 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 140 - 178
Target Start/End: Complemental strand, 38451079 - 38451041
Alignment:
Q |
140 |
tctcacaatagttatcattttacatgttttagttttagt |
178 |
Q |
|
|
|||||||||||||||| |||||||||||||||||||||| |
|
|
T |
38451079 |
tctcacaatagttatccttttacatgttttagttttagt |
38451041 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 64; Significance: 8e-28; HSPs: 18)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 91 - 178
Target Start/End: Complemental strand, 4623939 - 4623852
Alignment:
Q |
91 |
ctgtttgaaatagtttttattttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagttttagt |
178 |
Q |
|
|
|||||||||||||||||| ||||||||||||||||||| ||||| || |||||||||||||||| |||||||||||||||||||||| |
|
|
T |
4623939 |
ctgtttgaaatagtttttgttttcagtttttgaaatatataagtcatcttctcacaatagttatccttttacatgttttagttttagt |
4623852 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 91 - 175
Target Start/End: Complemental strand, 3001466 - 3001382
Alignment:
Q |
91 |
ctgtttgaaatagtttttattttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagtttt |
175 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||| |||| ||| ||||||||| |||||| ||||||||||||||||||| |
|
|
T |
3001466 |
ctgtttgaaatagtttttattttcagtttttgaaatatacaagtcctcttctcacaatggttatctttttacatgttttagtttt |
3001382 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 94 - 175
Target Start/End: Original strand, 23403601 - 23403682
Alignment:
Q |
94 |
tttgaaatagtttttattttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagtttt |
175 |
Q |
|
|
||||||||||||||| ||||||||||||||||||| |||| ||| |||||||||||||||| ||||||||||||||||||| |
|
|
T |
23403601 |
tttgaaatagtttttgttttcagtttttgaaatatacaagtcctcttctcacaatagttatccttttacatgttttagtttt |
23403682 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 90 - 178
Target Start/End: Original strand, 16655977 - 16656065
Alignment:
Q |
90 |
cctgtttgaaatagtttttattttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagttttagt |
178 |
Q |
|
|
||||||||||||||||||| |||||||||||| |||||| ||| || ||||||||||||||||||||||||||||||||||||||| |
|
|
T |
16655977 |
cctgtttgaaatagtttttgttttcagtttttaaaatatacaagccttcttctcacaatagttatcattttacatgttttagttttagt |
16656065 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 94 - 178
Target Start/End: Complemental strand, 30204734 - 30204650
Alignment:
Q |
94 |
tttgaaatagtttttattttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagttttagt |
178 |
Q |
|
|
||||||||||||||| ||||||||||||||||||| |||| || |||||||||||||||| |||||||||||||||||||||| |
|
|
T |
30204734 |
tttgaaatagtttttgttttcagtttttgaaatatacaagtcatcttctcacaatagttatccttttacatgttttagttttagt |
30204650 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 92 - 178
Target Start/End: Original strand, 41787497 - 41787583
Alignment:
Q |
92 |
tgtttgaaatagtttttattttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagttttagt |
178 |
Q |
|
|
||||| ||||||||||| |||||||||||| |||||| ||| ||||| ||| |||||||||||| |||||||||||||||||||||| |
|
|
T |
41787497 |
tgtttaaaatagtttttgttttcagtttttaaaatatataaattctcttcttacaatagttatctttttacatgttttagttttagt |
41787583 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 92 - 176
Target Start/End: Original strand, 14842309 - 14842393
Alignment:
Q |
92 |
tgtttgaaatagtttttattttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagtttta |
176 |
Q |
|
|
||||||||||| ||||| ||||||||||||||||||| |||| ||| | ||||||||||||||||||||||| ||||||||||| |
|
|
T |
14842309 |
tgtttgaaataatttttgttttcagtttttgaaatatacaagtcctcttttcacaatagttatcattttacatattttagtttta |
14842393 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 90 - 178
Target Start/End: Original strand, 37630001 - 37630089
Alignment:
Q |
90 |
cctgtttgaaatagtttttattttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagttttagt |
178 |
Q |
|
|
||||||||||||||||||| |||||||||||| |||||| |||| ||| |||| ||||||||| | |||||||||||||||||||||| |
|
|
T |
37630001 |
cctgtttgaaatagtttttgttttcagttttttaaatatataagccctcttctcgcaatagttagccttttacatgttttagttttagt |
37630089 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 91 - 178
Target Start/End: Original strand, 21567707 - 21567794
Alignment:
Q |
91 |
ctgtttgaaatagtttttattttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagttttagt |
178 |
Q |
|
|
|||||||||||||||||| ||||||||||| ||||||| || | ||| ||| |||||||||||| |||||||||||||||||||||| |
|
|
T |
21567707 |
ctgtttgaaatagtttttgttttcagttttagaaatatacaaatcctcttcttacaatagttatctttttacatgttttagttttagt |
21567794 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 90 - 163
Target Start/End: Original strand, 22798540 - 22798613
Alignment:
Q |
90 |
cctgtttgaaatagtttttattttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttaca |
163 |
Q |
|
|
||||||||||||||||||| ||||||||||||||||||| |||| ||| |||||||||||||||| ||||||| |
|
|
T |
22798540 |
cctgtttgaaatagtttttgttttcagtttttgaaatatacaagtcctcttctcacaatagttatccttttaca |
22798613 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 94 - 178
Target Start/End: Complemental strand, 36470222 - 36470137
Alignment:
Q |
94 |
tttgaaatagtttttatttt-cagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagttttagt |
178 |
Q |
|
|
||||||||| ||||| |||| ||||||||||||||| |||| || |||||||||||||||| |||||||||||||||||||||| |
|
|
T |
36470222 |
tttgaaataatttttgtttttcagtttttgaaatatacaagtcatcttctcacaatagttatccttttacatgttttagttttagt |
36470137 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 90 - 174
Target Start/End: Original strand, 4234177 - 4234261
Alignment:
Q |
90 |
cctgtttgaaatagtttttattttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagttt |
174 |
Q |
|
|
||||||| ||||||||||| ||||||||||||||||||| |||| || |||| ||||||||| | |||||||||||||||||| |
|
|
T |
4234177 |
cctgtttaaaatagtttttgttttcagtttttgaaatatacaagtcatcttctcgcaatagttagccttttacatgttttagttt |
4234261 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 94 - 178
Target Start/End: Original strand, 39436844 - 39436928
Alignment:
Q |
94 |
tttgaaatagtttttattttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagttttagt |
178 |
Q |
|
|
||||||||| ||||| |||||| |||||||||||| |||| ||| ||||||||||||||| ||||| |||||||||||||||| |
|
|
T |
39436844 |
tttgaaataatttttgttttcaatttttgaaatatacaagtcctcttctcacaatagttatttttttatatgttttagttttagt |
39436928 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 98 - 176
Target Start/End: Complemental strand, 29958596 - 29958518
Alignment:
Q |
98 |
aaatagtttttattttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagtttta |
176 |
Q |
|
|
||||| ||||| ||||||||||||||||||| |||| || | | |||||||||||| |||||||||||||||||||| |
|
|
T |
29958596 |
aaataatttttgttttcagtttttgaaatatacaagtcatcttattacaatagttatccttttacatgttttagtttta |
29958518 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 94 - 175
Target Start/End: Complemental strand, 23275613 - 23275532
Alignment:
Q |
94 |
tttgaaatagtttttattttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagtttt |
175 |
Q |
|
|
||||||||||||||| ||||||||||||||||||| |||| ||| | | || ||||||| ||||||||||||||||||| |
|
|
T |
23275613 |
tttgaaatagtttttgttttcagtttttgaaatatacaagtcctctttttacggtagttattcttttacatgttttagtttt |
23275532 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 94 - 176
Target Start/End: Complemental strand, 36046614 - 36046533
Alignment:
Q |
94 |
tttgaaatagtttttattttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagtttta |
176 |
Q |
|
|
||||||||||||||| ||| ||||||||||||||| || | | | |||||||||||||| |||||||||||||||||||| |
|
|
T |
36046614 |
tttgaaatagtttttgttt-cagtttttgaaatatacaaatctccttttcacaatagttatccttttacatgttttagtttta |
36046533 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 91 - 128
Target Start/End: Original strand, 4414226 - 4414263
Alignment:
Q |
91 |
ctgtttgaaatagtttttattttcagtttttgaaatat |
128 |
Q |
|
|
|||||||||||||||||| ||||||||||||||||||| |
|
|
T |
4414226 |
ctgtttgaaatagtttttgttttcagtttttgaaatat |
4414263 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 92 - 175
Target Start/End: Complemental strand, 45310103 - 45310021
Alignment:
Q |
92 |
tgtttgaaatagtttttattttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagtttt |
175 |
Q |
|
|
||||||||||||||||| |||||| |||||||||||| |||||||| | ||| ||| ||||| ||||||||||||| |||| |
|
|
T |
45310103 |
tgtttgaaatagtttttgttttcaatttttgaaatatacaagttctcttttcataatggttat-tctttacatgttttattttt |
45310021 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 64; Significance: 8e-28; HSPs: 6)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 91 - 178
Target Start/End: Complemental strand, 8163732 - 8163645
Alignment:
Q |
91 |
ctgtttgaaatagtttttattttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagttttagt |
178 |
Q |
|
|
|||||||||||||||||| ||||| ||||||||||||| |||||||| |||||||||||||||| |||||||||||||||||||||| |
|
|
T |
8163732 |
ctgtttgaaatagtttttgttttctgtttttgaaatatacaagttctcttctcacaatagttatctttttacatgttttagttttagt |
8163645 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 91 - 178
Target Start/End: Complemental strand, 40337155 - 40337068
Alignment:
Q |
91 |
ctgtttgaaatagtttttattttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagttttagt |
178 |
Q |
|
|
|||||||||||||||||| ||||||||||| |||||||| |||| || ||||||||||||||||||||||||||||||||||||||| |
|
|
T |
40337155 |
ctgtttgaaatagtttttgttttcagttttcgaaatatgcaagtcatcttctcacaatagttatcattttacatgttttagttttagt |
40337068 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 92 - 178
Target Start/End: Original strand, 41326042 - 41326128
Alignment:
Q |
92 |
tgtttgaaatagtttttattttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagttttagt |
178 |
Q |
|
|
||||||||||||||||| |||| |||||||||||||| ||| | || |||||||||||||||| |||||||||||||||||||||| |
|
|
T |
41326042 |
tgtttgaaatagtttttgttttgagtttttgaaatatataaatcttcttctcacaatagttatccttttacatgttttagttttagt |
41326128 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 110 - 178
Target Start/End: Original strand, 28089153 - 28089221
Alignment:
Q |
110 |
ttttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagttttagt |
178 |
Q |
|
|
||||||||||||||||||| || | || ||| ||||||||||||||||||||||||||||||||||| |
|
|
T |
28089153 |
ttttcagtttttgaaatatacaaatcatcttcttacaatagttatcattttacatgttttagttttagt |
28089221 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 91 - 178
Target Start/End: Complemental strand, 2362471 - 2362384
Alignment:
Q |
91 |
ctgtttgaaatagtttttattttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagttttagt |
178 |
Q |
|
|
|||||||||| | ||||| |||||||||||| |||||| || | || ||||||||||||||||||||||| | ||||||||||||| |
|
|
T |
2362471 |
ctgtttgaaacaatttttgttttcagtttttaaaatatacaaatcttcttctcacaatagttatcattttacttattttagttttagt |
2362384 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 93 - 175
Target Start/End: Complemental strand, 35589494 - 35589412
Alignment:
Q |
93 |
gtttgaaatagtttttattttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagtttt |
175 |
Q |
|
|
|||||||||||||||| ||||| |||||||||||| |||| ||| | ||| |||||||||| ||||| || |||||||||| |
|
|
T |
35589494 |
gtttgaaatagtttttgttttcgatttttgaaatatacaagtcctcttttcataatagttatccttttatatattttagtttt |
35589412 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 61; Significance: 5e-26; HSPs: 15)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 94 - 178
Target Start/End: Complemental strand, 36404308 - 36404224
Alignment:
Q |
94 |
tttgaaatagtttttattttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagttttagt |
178 |
Q |
|
|
||||||||||||||| ||||||||||||||||||| |||| ||| |||||||||||||||| |||||||||||||||||||||| |
|
|
T |
36404308 |
tttgaaatagtttttgttttcagtttttgaaatatacaagtcctcttctcacaatagttatccttttacatgttttagttttagt |
36404224 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 90 - 178
Target Start/End: Complemental strand, 37115977 - 37115889
Alignment:
Q |
90 |
cctgtttgaaatagtttttattttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagttttagt |
178 |
Q |
|
|
||||||||||||||||||| ||||||||||||||||||| ||||| || |||| ||||||||||||||||| |||||||||||||||| |
|
|
T |
37115977 |
cctgtttgaaatagtttttgttttcagtttttgaaatatataagtcatcttctcgcaatagttatcattttatatgttttagttttagt |
37115889 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 90 - 178
Target Start/End: Original strand, 46487269 - 46487356
Alignment:
Q |
90 |
cctgtttgaaatagtttttattttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagttttagt |
178 |
Q |
|
|
||||||||||||||||||| ||||||||||||||||||| ||||| || |||||||||||||||||||||| |||||||||||||||| |
|
|
T |
46487269 |
cctgtttgaaatagttttt-ttttcagtttttgaaatatataagtcttcttctcacaatagttatcattttatatgttttagttttagt |
46487356 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 89 - 180
Target Start/End: Original strand, 35534480 - 35534571
Alignment:
Q |
89 |
ccctgtttgaaatagtttttattttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagttttagttc |
180 |
Q |
|
|
|||||||| ||||||||||| ||||||||||||||||||| |||| || |||||||||||||||||||||| |||||||||||||||||| |
|
|
T |
35534480 |
ccctgtttaaaatagtttttgttttcagtttttgaaatatacaagtcttcttctcacaatagttatcattttatatgttttagttttagttc |
35534571 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 92 - 178
Target Start/End: Original strand, 39391958 - 39392044
Alignment:
Q |
92 |
tgtttgaaatagtttttattttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagttttagt |
178 |
Q |
|
|
||||||||||||||||| ||||||||||||||||||| ||||| || | |||||||||||||| |||||||||||||||||||||| |
|
|
T |
39391958 |
tgtttgaaatagtttttgttttcagtttttgaaatatacaagttttcttttcacaatagttatccttttacatgttttagttttagt |
39392044 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 91 - 178
Target Start/End: Original strand, 45602984 - 45603071
Alignment:
Q |
91 |
ctgtttgaaatagtttttattttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagttttagt |
178 |
Q |
|
|
|||||||||||||||||| ||||||||||||||||||| |||| || | |||||||||||||| |||||||||||||||||||||| |
|
|
T |
45602984 |
ctgtttgaaatagtttttgttttcagtttttgaaatatacaagtcatcttatcacaatagttatccttttacatgttttagttttagt |
45603071 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 90 - 178
Target Start/End: Original strand, 29360481 - 29360569
Alignment:
Q |
90 |
cctgtttgaaatagtttttattttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagttttagt |
178 |
Q |
|
|
||||||||||| | ||||| ||||||||||||||||||| |||| ||| ||||||| |||||||| |||||||||||||||||||||| |
|
|
T |
29360481 |
cctgtttgaaacaatttttcttttcagtttttgaaatatacaagtcctcttctcacagtagttatccttttacatgttttagttttagt |
29360569 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 90 - 176
Target Start/End: Original strand, 52742351 - 52742437
Alignment:
Q |
90 |
cctgtttgaaatagtttttattttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagtttta |
176 |
Q |
|
|
||||||||||||||||||| ||| ||||||||||||||| || ||||| | || |||||||||||||||||||| ||||||||||| |
|
|
T |
52742351 |
cctgtttgaaatagtttttgtttccagtttttgaaatatacaaattctcttatcgcaatagttatcattttacatattttagtttta |
52742437 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 90 - 174
Target Start/End: Original strand, 14201716 - 14201798
Alignment:
Q |
90 |
cctgtttgaaatagtttttattttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagttt |
174 |
Q |
|
|
||||||||||||||||||| |||||||||||||||||| ||||| ||| | ||||||||||||| |||||||||||||||||| |
|
|
T |
14201716 |
cctgtttgaaatagtttttgttttcagtttttgaaata--taagtcctcttttcacaatagttattcttttacatgttttagttt |
14201798 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 94 - 178
Target Start/End: Complemental strand, 48944191 - 48944107
Alignment:
Q |
94 |
tttgaaatagtttttattttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagttttagt |
178 |
Q |
|
|
||||||||||||||| |||| || ||||||||||| |||| ||| ||| |||||||||||||||||||||||||| |||||||| |
|
|
T |
48944191 |
tttgaaatagtttttctttttagcttttgaaatatacaagtcctcttcttacaatagttatcattttacatgtttttgttttagt |
48944107 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 103 - 175
Target Start/End: Complemental strand, 16353566 - 16353494
Alignment:
Q |
103 |
gtttttattttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagtttt |
175 |
Q |
|
|
|||||| ||||||||||||||||||| |||| ||| | |||||||||||||| ||||||||||||||||||| |
|
|
T |
16353566 |
gtttttgttttcagtttttgaaatatacaagtcctcttttcacaatagttatccttttacatgttttagtttt |
16353494 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 105 - 178
Target Start/End: Complemental strand, 3618415 - 3618342
Alignment:
Q |
105 |
ttttattttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagttttagt |
178 |
Q |
|
|
|||| |||||||||| |||||||| ||||| || |||||||||| ||||| |||||||||||||||||||||| |
|
|
T |
3618415 |
ttttgttttcagtttctgaaatatacaagttttcttctcacaatatttatctttttacatgttttagttttagt |
3618342 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 110 - 179
Target Start/End: Original strand, 48644540 - 48644609
Alignment:
Q |
110 |
ttttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagttttagtt |
179 |
Q |
|
|
|||||| |||||||||||| || | || |||||||||| ||||||||||||||||||||||||||||| |
|
|
T |
48644540 |
ttttcaatttttgaaatatacaaatcatcttctcacaatatttatcattttacatgttttagttttagtt |
48644609 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 110 - 178
Target Start/End: Complemental strand, 54883062 - 54882994
Alignment:
Q |
110 |
ttttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagttttagt |
178 |
Q |
|
|
||||| ||||||||||||| |||| ||| |||||||||| ||||| |||||| ||||||||||||||| |
|
|
T |
54883062 |
ttttcggtttttgaaatatagaagtcctcttctcacaatatttatccttttacgtgttttagttttagt |
54882994 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 140 - 178
Target Start/End: Original strand, 47599413 - 47599451
Alignment:
Q |
140 |
tctcacaatagttatcattttacatgttttagttttagt |
178 |
Q |
|
|
|||||||||||||||| |||||||||||||||||||||| |
|
|
T |
47599413 |
tctcacaatagttatccttttacatgttttagttttagt |
47599451 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 59; Significance: 7e-25; HSPs: 16)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 24909598 - 24909508
Alignment:
Q |
90 |
cctgtttgaaatagtttttattttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagttttagttc |
180 |
Q |
|
|
|||||||||||||||||||||||||||||||| |||||| ||||||| |||||||||||||||| |||||||| |||| |||||||||| |
|
|
T |
24909598 |
cctgtttgaaatagtttttattttcagtttttaaaatatactagttctcttctcacaatagttatccttttacatattttcgttttagttc |
24909508 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 94 - 175
Target Start/End: Original strand, 571650 - 571731
Alignment:
Q |
94 |
tttgaaatagtttttattttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagtttt |
175 |
Q |
|
|
||||||||||||||| ||||||||||||||||||| || || ||| ||||| |||||||||||||||||||||||||||||| |
|
|
T |
571650 |
tttgaaatagtttttgttttcagtttttgaaatatatacgtcctcttctcataatagttatcattttacatgttttagtttt |
571731 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 90 - 178
Target Start/End: Original strand, 3695405 - 3695493
Alignment:
Q |
90 |
cctgtttgaaatagtttttattttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagttttagt |
178 |
Q |
|
|
||||||||||||||||||| ||||| ||||||||||||| |||| | | | ||| ||||||||||||||||||||||||||||||||| |
|
|
T |
3695405 |
cctgtttgaaatagtttttgttttcggtttttgaaatatacaagtccccttttcataatagttatcattttacatgttttagttttagt |
3695493 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 90 - 178
Target Start/End: Original strand, 11121856 - 11121944
Alignment:
Q |
90 |
cctgtttgaaatagtttttattttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagttttagt |
178 |
Q |
|
|
||||||| |||||||||| ||||||||||||||||||| |||| || || |||||||||||||||||||||||||||||||||||| |
|
|
T |
11121856 |
cctgtttataatagtttttgttttcagtttttgaaatatacaagtcatcttcgcacaatagttatcattttacatgttttagttttagt |
11121944 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 90 - 178
Target Start/End: Original strand, 39001946 - 39002034
Alignment:
Q |
90 |
cctgtttgaaatagtttttattttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagttttagt |
178 |
Q |
|
|
||||||||||||||||||| ||||||||||||||||||| |||| ||| | | ||||||||||| |||||||||||||||||||||| |
|
|
T |
39001946 |
cctgtttgaaatagtttttgttttcagtttttgaaatatacaagtcctctttttgcaatagttatccttttacatgttttagttttagt |
39002034 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 90 - 178
Target Start/End: Complemental strand, 6750400 - 6750312
Alignment:
Q |
90 |
cctgtttgaaatagtttttattttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagttttagt |
178 |
Q |
|
|
||||||||||||||||||| ||||||||||||||||||| || | | | |||||||||||||| |||||||||||||||||||||| |
|
|
T |
6750400 |
cctgtttgaaatagtttttgttttcagtttttgaaatatacaaatccctttttcacaatagttatctttttacatgttttagttttagt |
6750312 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 90 - 178
Target Start/End: Complemental strand, 41998969 - 41998881
Alignment:
Q |
90 |
cctgtttgaaatagtttttattttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagttttagt |
178 |
Q |
|
|
||||||||||||||||||| |||||| |||||||||||| |||| || |||||||||| ||||| ||||| |||||||||||||||| |
|
|
T |
41998969 |
cctgtttgaaatagtttttgttttcattttttgaaatatacaagtcttcttctcacaatatttatctttttatatgttttagttttagt |
41998881 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 92 - 175
Target Start/End: Original strand, 794914 - 794997
Alignment:
Q |
92 |
tgtttgaaatagtttttattttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagtttt |
175 |
Q |
|
|
||||||||||| ||||| ||||||||||||||||||| | || || |||||||||||||||| ||||||||||||||||||| |
|
|
T |
794914 |
tgtttgaaatattttttgttttcagtttttgaaatatacaggtcttcttctcacaatagttatccttttacatgttttagtttt |
794997 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 112 - 178
Target Start/End: Original strand, 36290612 - 36290678
Alignment:
Q |
112 |
ttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagttttagt |
178 |
Q |
|
|
||||||||||||||||| |||| ||| ||| ||||||||||||||||||||||||||||||||||| |
|
|
T |
36290612 |
ttcagtttttgaaatatacaagtcctcttctgacaatagttatcattttacatgttttagttttagt |
36290678 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 90 - 175
Target Start/End: Complemental strand, 26654030 - 26653945
Alignment:
Q |
90 |
cctgtttgaaatagtttttattttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagtttt |
175 |
Q |
|
|
||||||||||||||||||| |||||| |||||||||||| | || ||| ||||||||| |||||| |||||||||||||| |||| |
|
|
T |
26654030 |
cctgtttgaaatagtttttgttttcaatttttgaaatatacaggtcctcttctcacaatggttatccttttacatgttttaatttt |
26653945 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 94 - 178
Target Start/End: Original strand, 18808781 - 18808865
Alignment:
Q |
94 |
tttgaaatagtttttattttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagttttagt |
178 |
Q |
|
|
||||||||| ||||| |||||||||| |||||||| |||| || |||||||||||||||| ||||| |||||||||||||||| |
|
|
T |
18808781 |
tttgaaataatttttgttttcagtttatgaaatatacaagtcttcttctcacaatagttatccttttatatgttttagttttagt |
18808865 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 92 - 175
Target Start/End: Complemental strand, 44272446 - 44272362
Alignment:
Q |
92 |
tgtttgaaatagtttttattttcagttttt-gaaatatgtaagttctcatctcacaatagttatcattttacatgttttagtttt |
175 |
Q |
|
|
||||||||||||||||| |||||||||||| ||||||| |||||||| | ||| ||| ||||| |||||||||||||||||||| |
|
|
T |
44272446 |
tgtttgaaatagtttttgttttcagttttttgaaatatacaagttctcttttcataatggttattattttacatgttttagtttt |
44272362 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 90 - 155
Target Start/End: Complemental strand, 4792658 - 4792593
Alignment:
Q |
90 |
cctgtttgaaatagtttttattttcagtttttgaaatatgtaagttctcatctcacaatagttatc |
155 |
Q |
|
|
||||||| ||||||||||| |||| |||||||||||||| |||||||| |||||||||||||||| |
|
|
T |
4792658 |
cctgtttaaaatagtttttgtttttagtttttgaaatatacaagttctcttctcacaatagttatc |
4792593 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 90 - 169
Target Start/End: Original strand, 1585859 - 1585938
Alignment:
Q |
90 |
cctgtttgaaatagtttttattttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgtttt |
169 |
Q |
|
|
||||||||||||||||| | |||| |||||||||||||| |||| || ||| |||||||||||| ||||||||||||| |
|
|
T |
1585859 |
cctgtttgaaatagtttatgtttttagtttttgaaatatacaagtcttcttcttacaatagttatccttttacatgtttt |
1585938 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 118 - 178
Target Start/End: Complemental strand, 7409885 - 7409825
Alignment:
Q |
118 |
ttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagttttagt |
178 |
Q |
|
|
||||||||||| ||||||| ||||| |||||||||| |||||||||||||||||||||| |
|
|
T |
7409885 |
ttttgaaatataatagttctcttctcataatagttatccttttacatgttttagttttagt |
7409825 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 92 - 127
Target Start/End: Complemental strand, 9224912 - 9224877
Alignment:
Q |
92 |
tgtttgaaatagtttttattttcagtttttgaaata |
127 |
Q |
|
|
||||||||||||||||| |||||||||||||||||| |
|
|
T |
9224912 |
tgtttgaaatagtttttgttttcagtttttgaaata |
9224877 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0140 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0140
Description:
Target: scaffold0140; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 90 - 178
Target Start/End: Original strand, 21475 - 21563
Alignment:
Q |
90 |
cctgtttgaaatagtttttattttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagttttagt |
178 |
Q |
|
|
||||||||||| ||||||| ||||||||||||||||||| ||| | || ||||||||||||||| ||||||||||||||||||||||| |
|
|
T |
21475 |
cctgtttgaaacagtttttgttttcagtttttgaaatatataaatcatcttctcacaatagttattattttacatgttttagttttagt |
21563 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0025 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0025
Description:
Target: scaffold0025; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 85 - 179
Target Start/End: Original strand, 67866 - 67960
Alignment:
Q |
85 |
atgaccctgtttgaaatagtttttattttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagttttagtt |
179 |
Q |
|
|
|||| ||||||||||||| ||||| |||||||||||| |||||| |||| ||| ||| |||||||||||| ||||||||||||||||||||||| |
|
|
T |
67866 |
atgagcctgtttgaaataatttttgttttcagtttttaaaatatacaagtcctcttctaacaatagttatccttttacatgttttagttttagtt |
67960 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0302 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0302
Description:
Target: scaffold0302; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 90 - 178
Target Start/End: Complemental strand, 18593 - 18505
Alignment:
Q |
90 |
cctgtttgaaatagtttttattttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagttttagt |
178 |
Q |
|
|
||||||||||||||||||| ||| |||||||||||||| |||| || |||||||||||||||| |||||||||||||||||||||| |
|
|
T |
18593 |
cctgtttgaaatagtttttggttttagtttttgaaatatacaagtcatcttctcacaatagttatccttttacatgttttagttttagt |
18505 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0121 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0121
Description:
Target: scaffold0121; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 94 - 178
Target Start/End: Complemental strand, 37489 - 37405
Alignment:
Q |
94 |
tttgaaatagtttttattttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagttttagt |
178 |
Q |
|
|
||||||||||| ||| ||||| ||||||||||||| |||| ||| |||| |||||||||||||||||||| ||||||||||||| |
|
|
T |
37489 |
tttgaaatagtgtttgttttcggtttttgaaatatacaagtcctcttctcgcaatagttatcattttacatattttagttttagt |
37405 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0532 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0532
Description:
Target: scaffold0532; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 92 - 178
Target Start/End: Original strand, 11320 - 11406
Alignment:
Q |
92 |
tgtttgaaatagtttttattttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagttttagt |
178 |
Q |
|
|
||||||||||||||||| ||||||||||||||||||| |||| ||| ||||| | |||||||| ||| ||||||||| |||||||| |
|
|
T |
11320 |
tgtttgaaatagtttttgttttcagtttttgaaatatacaagtcctcttctcagagtagttatcctttaacatgtttttgttttagt |
11406 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1248 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold1248
Description:
Target: scaffold1248; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 93 - 178
Target Start/End: Original strand, 970 - 1055
Alignment:
Q |
93 |
gtttgaaatagtttttattttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagttttagt |
178 |
Q |
|
|
|||||||||||||||| |||||||||||| |||||| |||| | |||| ||||||||| ||||| |||||||||||||||| |
|
|
T |
970 |
gtttgaaatagtttttgttttcagtttttaaaatatacaagtctttttctcgtaatagttattcttttatatgttttagttttagt |
1055 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0952 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0952
Description:
Target: scaffold0952; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 93 - 178
Target Start/End: Complemental strand, 1343 - 1258
Alignment:
Q |
93 |
gtttgaaatagtttttattttcagtttttgaaatatgtaagttctcatctcacaatagttatcattttacatgttttagttttagt |
178 |
Q |
|
|
|||||||||||||||| |||||||||||| |||||| |||| | |||| ||||||||| ||||| |||||||||||||||| |
|
|
T |
1343 |
gtttgaaatagtttttgttttcagtttttaaaatatacaagtctttttctcgtaatagttattcttttatatgttttagttttagt |
1258 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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