View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10084_low_15 (Length: 250)
Name: NF10084_low_15
Description: NF10084
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10084_low_15 |
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Alignment Details
Target: chr3 (Bit Score: 242; Significance: 1e-134; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 40307212 - 40307457
Alignment:
| Q |
1 |
ctcttgttaattagcttgactgttcaagacctggaggagatgttggctgaagatttgatttggtgggaagaccagaagactgtttttgggacctgggcct |
100 |
Q |
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| T |
40307212 |
ctcttgttaattagcttgactgttcaagacctggaggagatgttggctgaagatttgatttggtgggaagaccagaagactgtttttgggacctgggcct |
40307311 |
T |
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| Q |
101 |
ttcttctccctgcaaaggaacaagcttctcgggaccacaatttgctccttccaactcaagttctggttttctcttcgccttctttgttaagacaccgtca |
200 |
Q |
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||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40307312 |
ttcttcttcctgcaaaggaacaagcttctcgggaccacaatttgctccttccaactcaagttctggttttctcttcgccttctttgttaagacaccgtca |
40307411 |
T |
|
| Q |
201 |
gcaacacggacatcgtccatggaactgcttgaacttccctttgctt |
246 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40307412 |
gcaacacggacatcgtccatggaactgcttgaacttccctttgctt |
40307457 |
T |
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