View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10085_high_9 (Length: 281)
Name: NF10085_high_9
Description: NF10085
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10085_high_9 |
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Alignment Details
Target: chr5 (Bit Score: 242; Significance: 1e-134; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 1 - 264
Target Start/End: Original strand, 39794693 - 39794953
Alignment:
| Q |
1 |
atacattatatgctactcttcaccaatgtataggaccacaatagcatgtaacgttattgctgggaaattagttgcattgttggactcagtctagagctta |
100 |
Q |
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| T |
39794693 |
atacattatatgctactcttcaccaatgtataggaccacaatagcatgtaacgttattg---ggaaattagttgcattgttggactcagtctagagctta |
39794789 |
T |
|
| Q |
101 |
aaataatggcagtaagagcttcaatgatataatcgcagtaagaacttgaaagttaaaatccaattacatatataaataatatgaaaagcaattgattaca |
200 |
Q |
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| T |
39794790 |
aaataatggcagtaagagcatcaatgatataatcgcagtaagaacttgaaagttaaaatccaattacatatataaataatatgaaaagcaattgattaca |
39794889 |
T |
|
| Q |
201 |
aaatttacaagctttgtgtacccacatgtacaatgttatttatttacgagaaacccacaaaaac |
264 |
Q |
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|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39794890 |
aaatttacaagctttgtgtaaccacatgtacaatgttatttatttacgagaaacccacaaaaac |
39794953 |
T |
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