View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10085_low_9 (Length: 283)
Name: NF10085_low_9
Description: NF10085
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10085_low_9 |
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Alignment Details
Target: chr3 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 11 - 267
Target Start/End: Original strand, 26891328 - 26891583
Alignment:
| Q |
11 |
caaaggcaattgacactctagaatggtccttcctgctaaaacctcttagaagttttggggttcaatgatgctttttgtaactagattcatttgattctaa |
110 |
Q |
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| T |
26891328 |
caaaggcaattgacactctagaatggtccttcctgctaaa-cttcttagaagttttggggttcaatgatgctttttgtaactagattcatttgattctaa |
26891426 |
T |
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| Q |
111 |
aatcctatttcctctcagtttatatcaatggaaaatcacatggatacttcaatgctaatcgaagagtcaggtagggatatcctctctcccttatcctatt |
210 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| |
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| T |
26891427 |
aatcctatttcctctcagtttatatcaatggaaaatcacatggatacttcaatgctaatcgaagagtcaggcagggagatcctctctcccttatcctatt |
26891526 |
T |
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| Q |
211 |
atgcctagctgaggatgttcttagtaaaagcatttcaaagcttgtggatgaaggaaa |
267 |
Q |
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|||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
26891527 |
atgcctagctgaggatgttcttggtaaaagcatttcaaagcttgtggatgaaggaaa |
26891583 |
T |
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