View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10088_high_12 (Length: 242)
Name: NF10088_high_12
Description: NF10088
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10088_high_12 |
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Alignment Details
Target: chr8 (Bit Score: 231; Significance: 1e-128; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 231; E-Value: 1e-128
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 30994759 - 30994997
Alignment:
| Q |
1 |
cctctaagattttttgaagcaacatactaccattaacaaagacctttatattatccaaatgaagggtgtctcctcttaacatgtttagatttgaatcatt |
100 |
Q |
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| T |
30994759 |
cctctaagattttttgaagcaacatactaccattaacaaagaccttcatattatccaaatgaagggtgtctcctcttaacatgtttagatttgaatcatt |
30994858 |
T |
|
| Q |
101 |
tgaaaatgacaaagttcctccactgttaaaaaatgcatctagtgcagaagcaagaacataaacagtgtcataggcgtataaaccaaacatgtttaaacca |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30994859 |
tgaaaatgacaaagttcctccactgttaaaaaatgcatctagtgcagaagcaagaacataaacagtgtcataggcgtataaaccaaacatgtttaaacca |
30994958 |
T |
|
| Q |
201 |
aaagaaggaccatgattatggtcatgatcagaacctatg |
239 |
Q |
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|||||||| |||||||||||||||||||||||||||||| |
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| T |
30994959 |
aaagaaggcccatgattatggtcatgatcagaacctatg |
30994997 |
T |
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