View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10089_low_11 (Length: 249)
Name: NF10089_low_11
Description: NF10089
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10089_low_11 |
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Alignment Details
Target: chr5 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 3003004 - 3002766
Alignment:
| Q |
1 |
aaagtagagcaatcaactcctcatcttgcaaacgaattctatgaagcggcacgttatgacacactcaccaaattaaattcttcactttcgatggaacttt |
100 |
Q |
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| T |
3003004 |
aaaggagagcaatcaactcctcatcttgcaaacgaattctatgaagcggcacgttatgacacactcaccaaattaaattcttcactttcgatggaacttt |
3002905 |
T |
|
| Q |
101 |
caaacaccaaatgcaatcccaattccctaccacacctttcattttcaaatgaccgacattaatcaactcattgatgcacaacttataagcactttgcatt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3002904 |
caaacaccaaatgcaatcccaattccctaccacacctttcattttcaaatgaccgacattaatcaactcattgatgcacaacttataagcactttgcatt |
3002805 |
T |
|
| Q |
201 |
gaataattcccatggtttccaccttccatatgtgtctgt |
239 |
Q |
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||||||||||||||||||||||||||||||||||||||| |
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| T |
3002804 |
gaataattcccatggtttccaccttccatatgtgtctgt |
3002766 |
T |
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