View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10089_low_2 (Length: 527)

Name: NF10089_low_2
Description: NF10089
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10089_low_2
NF10089_low_2
[»] chr2 (37 HSPs)
chr2 (272-441)||(4579551-4579720)
chr2 (272-441)||(25193063-25193231)
chr2 (16-214)||(4579776-4579950)
chr2 (105-203)||(18298080-18298176)
chr2 (104-203)||(20709773-20709870)
chr2 (105-193)||(25192892-25192978)
chr2 (106-204)||(14551287-14551382)
chr2 (272-337)||(18297940-18298005)
chr2 (279-322)||(20709981-20710024)
chr2 (16-65)||(16126671-16126720)
chr2 (16-65)||(19228442-19228491)
chr2 (16-65)||(22705471-22705520)
chr2 (16-65)||(27665156-27665205)
chr2 (16-65)||(39904160-39904209)
chr2 (131-194)||(4281766-4281827)
chr2 (131-194)||(25995313-25995374)
chr2 (455-514)||(4579483-4579542)
chr2 (16-66)||(15411734-15411784)
chr2 (111-141)||(19246663-19246693)
chr2 (28-66)||(36731208-36731246)
chr2 (112-141)||(1292073-1292102)
chr2 (112-141)||(7487148-7487177)
chr2 (16-65)||(12016683-12016732)
chr2 (112-141)||(12449056-12449085)
chr2 (16-65)||(14377441-14377490)
chr2 (16-65)||(16123295-16123344)
chr2 (112-141)||(20661398-20661427)
chr2 (112-141)||(24183610-24183639)
chr2 (112-141)||(31783795-31783824)
chr2 (112-141)||(31783998-31784027)
chr2 (112-141)||(34726606-34726635)
chr2 (112-141)||(39355178-39355207)
chr2 (112-141)||(41345089-41345118)
chr2 (115-147)||(8149968-8150000)
chr2 (115-147)||(8154592-8154624)
chr2 (112-140)||(25575325-25575353)
chr2 (16-56)||(26229974-26230014)
[»] chr8 (56 HSPs)
chr8 (272-441)||(39658268-39658437)
chr8 (272-440)||(4836427-4836595)
chr8 (272-440)||(4841872-4842040)
chr8 (272-441)||(2750198-2750365)
chr8 (272-440)||(1208870-1209039)
chr8 (272-441)||(8550675-8550838)
chr8 (272-441)||(7058285-7058443)
chr8 (104-212)||(1208708-1208814)
chr8 (103-203)||(32987414-32987512)
chr8 (105-180)||(39021975-39022050)
chr8 (105-194)||(7058114-7058201)
chr8 (109-194)||(4836679-4836762)
chr8 (109-194)||(4842124-4842207)
chr8 (105-170)||(42433701-42433766)
chr8 (105-172)||(40012180-40012247)
chr8 (105-181)||(15260840-15260917)
chr8 (281-321)||(39022186-39022226)
chr8 (130-203)||(7614093-7614164)
chr8 (131-203)||(8550530-8550600)
chr8 (279-319)||(15260667-15260707)
chr8 (131-197)||(15181817-15181881)
chr8 (16-65)||(10129120-10129169)
chr8 (16-65)||(35678387-35678436)
chr8 (17-65)||(4080506-4080554)
chr8 (17-65)||(4084655-4084703)
chr8 (17-65)||(4102962-4103010)
chr8 (283-323)||(32987260-32987299)
chr8 (112-147)||(185883-185918)
chr8 (112-147)||(17656620-17656655)
chr8 (112-147)||(23397450-23397485)
chr8 (112-147)||(23567488-23567523)
chr8 (105-170)||(15227030-15227096)
chr8 (111-141)||(18161289-18161319)
chr8 (111-141)||(27506707-27506737)
chr8 (112-142)||(40022390-40022420)
chr8 (112-141)||(1149917-1149946)
chr8 (112-141)||(1672944-1672973)
chr8 (112-141)||(4835520-4835549)
chr8 (16-65)||(7140571-7140620)
chr8 (112-141)||(10237497-10237526)
chr8 (16-65)||(13328053-13328102)
chr8 (112-141)||(15227173-15227202)
chr8 (112-141)||(15809853-15809882)
chr8 (112-141)||(17792905-17792934)
chr8 (16-65)||(19343949-19343998)
chr8 (112-141)||(24473257-24473286)
chr8 (112-141)||(34633215-34633244)
chr8 (112-141)||(34647173-34647202)
chr8 (112-141)||(35301631-35301660)
chr8 (112-141)||(35448623-35448652)
chr8 (16-65)||(38527837-38527886)
chr8 (112-141)||(39657710-39657739)
chr8 (16-65)||(39701915-39701964)
chr8 (113-141)||(1209799-1209827)
chr8 (16-64)||(3306168-3306216)
chr8 (25-65)||(8140593-8140633)
[»] chr7 (60 HSPs)
chr7 (272-441)||(48691155-48691324)
chr7 (272-441)||(48305399-48305566)
chr7 (273-441)||(15974662-15974829)
chr7 (275-361)||(28396888-28396974)
chr7 (103-203)||(30428871-30428969)
chr7 (103-202)||(15974906-15975003)
chr7 (105-211)||(48690895-48690999)
chr7 (103-194)||(46024025-46024114)
chr7 (105-178)||(12279745-12279818)
chr7 (104-181)||(48305236-48305312)
chr7 (105-212)||(28396722-28396827)
chr7 (105-170)||(25778837-25778902)
chr7 (279-337)||(46024236-46024294)
chr7 (272-318)||(46573348-46573394)
chr7 (16-65)||(39757222-39757271)
chr7 (131-194)||(5757413-5757474)
chr7 (105-181)||(12279641-12279717)
chr7 (279-321)||(30429080-30429122)
chr7 (151-212)||(48691038-48691097)
chr7 (16-65)||(9331978-9332027)
chr7 (16-65)||(19889357-19889406)
chr7 (16-65)||(24250330-24250379)
chr7 (16-81)||(32117831-32117896)
chr7 (16-65)||(36548572-36548621)
chr7 (16-65)||(47120306-47120355)
chr7 (105-203)||(46573469-46573563)
chr7 (112-147)||(763834-763869)
chr7 (112-147)||(6620621-6620656)
chr7 (112-147)||(15973862-15973897)
chr7 (112-147)||(46572576-46572611)
chr7 (16-66)||(19868130-19868180)
chr7 (16-65)||(3561990-3562039)
chr7 (16-65)||(5909394-5909443)
chr7 (112-141)||(11732044-11732073)
chr7 (112-141)||(16933137-16933166)
chr7 (112-141)||(16938520-16938549)
chr7 (16-65)||(23982868-23982917)
chr7 (112-141)||(26945727-26945756)
chr7 (112-141)||(30884116-30884145)
chr7 (112-141)||(31660212-31660241)
chr7 (112-141)||(33798746-33798775)
chr7 (112-141)||(35737091-35737120)
chr7 (112-141)||(38837742-38837771)
chr7 (16-65)||(39869139-39869188)
chr7 (112-141)||(41911006-41911035)
chr7 (112-141)||(44426600-44426629)
chr7 (112-141)||(46004548-46004577)
chr7 (112-141)||(46358663-46358692)
chr7 (112-141)||(47340290-47340319)
chr7 (112-141)||(48692063-48692092)
chr7 (112-141)||(48830612-48830641)
chr7 (112-140)||(7845111-7845139)
chr7 (17-65)||(12086043-12086091)
chr7 (17-65)||(24463067-24463115)
chr7 (112-140)||(31365273-31365301)
chr7 (398-438)||(33534773-33534813)
chr7 (112-140)||(34227678-34227706)
chr7 (112-140)||(43742251-43742279)
chr7 (131-194)||(44141229-44141290)
chr7 (111-147)||(46004342-46004378)
[»] chr5 (50 HSPs)
chr5 (272-441)||(34329286-34329455)
chr5 (272-441)||(2826791-2826963)
chr5 (107-193)||(25017196-25017280)
chr5 (105-194)||(28070131-28070218)
chr5 (107-203)||(13362772-13362866)
chr5 (104-203)||(23335676-23335773)
chr5 (105-181)||(34329127-34329203)
chr5 (272-321)||(28070008-28070057)
chr5 (279-337)||(23335502-23335560)
chr5 (16-65)||(5958236-5958285)
chr5 (17-81)||(13516022-13516086)
chr5 (131-203)||(16668763-16668833)
chr5 (16-81)||(32020081-32020146)
chr5 (144-203)||(2827036-2827093)
chr5 (279-319)||(25017050-25017090)
chr5 (144-197)||(18465531-18465582)
chr5 (111-145)||(39086715-39086749)
chr5 (16-65)||(2795540-2795589)
chr5 (16-65)||(11636748-11636797)
chr5 (16-65)||(12642105-12642154)
chr5 (16-65)||(34578028-34578077)
chr5 (17-65)||(9184225-9184273)
chr5 (283-323)||(13362991-13363030)
chr5 (105-177)||(42512200-42512271)
chr5 (100-170)||(13552978-13553049)
chr5 (112-147)||(15559051-15559086)
chr5 (112-147)||(20134406-20134441)
chr5 (112-147)||(37456817-37456852)
chr5 (111-141)||(22830801-22830831)
chr5 (111-140)||(703731-703760)
chr5 (112-141)||(3340592-3340621)
chr5 (112-145)||(3340788-3340821)
chr5 (112-141)||(3883929-3883958)
chr5 (16-65)||(4047429-4047478)
chr5 (16-65)||(11375976-11376025)
chr5 (112-141)||(11660795-11660824)
chr5 (112-141)||(11660995-11661024)
chr5 (112-141)||(13553126-13553155)
chr5 (112-141)||(14394611-14394640)
chr5 (112-141)||(14940250-14940279)
chr5 (16-65)||(15190889-15190938)
chr5 (112-141)||(22695553-22695582)
chr5 (112-141)||(23155527-23155556)
chr5 (112-141)||(25545585-25545614)
chr5 (112-141)||(26637731-26637760)
chr5 (112-141)||(35662069-35662098)
chr5 (112-141)||(39861793-39861822)
chr5 (17-65)||(10665077-10665125)
chr5 (112-140)||(20134201-20134229)
chr5 (112-140)||(22672011-22672039)
[»] chr4 (72 HSPs)
chr4 (273-440)||(26447138-26447305)
chr4 (272-440)||(638023-638190)
chr4 (103-203)||(27764238-27764336)
chr4 (109-203)||(36621670-36621762)
chr4 (105-193)||(26447391-26447477)
chr4 (272-336)||(51836920-51836984)
chr4 (105-194)||(45255975-45256062)
chr4 (108-194)||(22181223-22181307)
chr4 (272-337)||(45256148-45256213)
chr4 (104-170)||(50643742-50643808)
chr4 (276-321)||(27764451-27764496)
chr4 (279-323)||(21097349-21097393)
chr4 (279-320)||(4168567-4168608)
chr4 (105-193)||(21097140-21097226)
chr4 (279-323)||(18923466-18923510)
chr4 (107-170)||(29826606-29826669)
chr4 (283-337)||(38485470-38485524)
chr4 (101-203)||(38485643-38485739)
chr4 (131-194)||(4168384-4168445)
chr4 (283-337)||(22181044-22181098)
chr4 (16-81)||(27756578-27756643)
chr4 (16-65)||(29190928-29190977)
chr4 (105-193)||(50563708-50563794)
chr4 (16-68)||(9326979-9327031)
chr4 (16-68)||(9373701-9373753)
chr4 (16-68)||(9382013-9382065)
chr4 (134-180)||(637883-637929)
chr4 (108-181)||(1729604-1729678)
chr4 (111-141)||(8157302-8157332)
chr4 (111-141)||(49492405-49492435)
chr4 (105-170)||(55765481-55765547)
chr4 (112-141)||(1492674-1492703)
chr4 (112-141)||(2124346-2124375)
chr4 (112-141)||(6841823-6841852)
chr4 (16-65)||(7349705-7349754)
chr4 (112-141)||(8165764-8165793)
chr4 (112-141)||(10473661-10473690)
chr4 (112-141)||(11786117-11786146)
chr4 (112-141)||(11798284-11798313)
chr4 (112-141)||(12722739-12722768)
chr4 (112-141)||(13635619-13635648)
chr4 (112-141)||(15051030-15051059)
chr4 (112-141)||(17109931-17109960)
chr4 (112-141)||(21995672-21995701)
chr4 (112-141)||(22180208-22180237)
chr4 (112-141)||(25715645-25715674)
chr4 (112-141)||(26577263-26577292)
chr4 (112-141)||(30358850-30358879)
chr4 (112-141)||(30597842-30597871)
chr4 (112-141)||(30779345-30779374)
chr4 (112-141)||(31763121-31763150)
chr4 (112-141)||(33819693-33819722)
chr4 (112-141)||(33883296-33883325)
chr4 (28-65)||(35911143-35911180)
chr4 (112-141)||(36924243-36924272)
chr4 (112-141)||(37059713-37059742)
chr4 (112-141)||(45256908-45256937)
chr4 (16-65)||(49228373-49228422)
chr4 (16-69)||(49332349-49332402)
chr4 (112-141)||(49425951-49425980)
chr4 (112-141)||(50644683-50644712)
chr4 (112-141)||(53441463-53441492)
chr4 (112-141)||(53865256-53865285)
chr4 (112-141)||(54895596-54895625)
chr4 (113-141)||(639007-639035)
chr4 (16-64)||(10658557-10658605)
chr4 (16-64)||(10872702-10872750)
chr4 (103-170)||(30597697-30597765)
chr4 (112-140)||(31762931-31762959)
chr4 (113-141)||(36309419-36309447)
chr4 (16-64)||(39876847-39876895)
chr4 (105-141)||(48077874-48077910)
[»] chr1 (58 HSPs)
chr1 (272-441)||(179779-179948)
chr1 (272-440)||(8402035-8402203)
chr1 (272-440)||(22348210-22348376)
chr1 (105-203)||(18056784-18056880)
chr1 (105-203)||(22348039-22348135)
chr1 (105-203)||(45889596-45889692)
chr1 (105-194)||(16115851-16115938)
chr1 (279-337)||(23319883-23319941)
chr1 (105-194)||(23320063-23320158)
chr1 (279-337)||(45889805-45889863)
chr1 (279-320)||(18056991-18057032)
chr1 (131-193)||(37639368-37639428)
chr1 (16-65)||(313766-313815)
chr1 (105-170)||(23921898-23921963)
chr1 (16-81)||(38539103-38539168)
chr1 (16-81)||(38561321-38561386)
chr1 (16-65)||(39150439-39150488)
chr1 (16-65)||(51382388-51382437)
chr1 (131-194)||(35198159-35198220)
chr1 (144-194)||(179647-179695)
chr1 (112-147)||(1395358-1395393)
chr1 (112-151)||(19897654-19897693)
chr1 (112-147)||(29945423-29945458)
chr1 (149-203)||(30802440-30802492)
chr1 (112-147)||(32143776-32143811)
chr1 (103-194)||(8402289-8402371)
chr1 (16-66)||(39627683-39627733)
chr1 (112-141)||(6314259-6314288)
chr1 (16-65)||(8062221-8062270)
chr1 (112-141)||(9041064-9041093)
chr1 (112-141)||(9628612-9628641)
chr1 (112-141)||(10974635-10974664)
chr1 (112-141)||(14229174-14229203)
chr1 (112-141)||(16976098-16976127)
chr1 (112-141)||(17811296-17811325)
chr1 (112-141)||(17893074-17893103)
chr1 (112-141)||(17893286-17893315)
chr1 (16-65)||(17919470-17919519)
chr1 (112-141)||(23817453-23817482)
chr1 (112-141)||(24636069-24636098)
chr1 (112-141)||(31763986-31764015)
chr1 (112-141)||(32595296-32595325)
chr1 (16-65)||(32716275-32716324)
chr1 (112-141)||(33156994-33157023)
chr1 (112-141)||(42134146-42134175)
chr1 (112-141)||(43452685-43452714)
chr1 (16-65)||(44918041-44918090)
chr1 (112-141)||(48762225-48762254)
chr1 (112-141)||(49936831-49936860)
chr1 (112-141)||(49992520-49992549)
chr1 (104-167)||(4097911-4097975)
chr1 (455-508)||(8401973-8402026)
chr1 (112-140)||(11422584-11422612)
chr1 (112-140)||(23920973-23921001)
chr1 (105-141)||(41033262-41033298)
chr1 (112-140)||(42133946-42133974)
chr1 (113-141)||(45849111-45849139)
chr1 (103-170)||(49936937-49937005)
[»] chr3 (52 HSPs)
chr3 (272-440)||(52987376-52987544)
chr3 (272-441)||(50754175-50754344)
chr3 (272-440)||(31852277-31852445)
chr3 (105-203)||(51362407-51362503)
chr3 (105-193)||(19385294-19385380)
chr3 (107-203)||(50754008-50754102)
chr3 (105-203)||(7045269-7045365)
chr3 (105-180)||(8718101-8718176)
chr3 (105-180)||(9069988-9070063)
chr3 (109-203)||(16277383-16277475)
chr3 (118-203)||(52987619-52987702)
chr3 (272-323)||(19385162-19385213)
chr3 (272-319)||(51362286-51362333)
chr3 (272-321)||(7045146-7045195)
chr3 (279-323)||(8718318-8718362)
chr3 (279-323)||(9070205-9070249)
chr3 (16-65)||(3863346-3863395)
chr3 (16-65)||(11610931-11610980)
chr3 (16-65)||(32553383-32553432)
chr3 (16-65)||(51339296-51339345)
chr3 (104-170)||(9106266-9106333)
chr3 (112-147)||(26662432-26662467)
chr3 (144-193)||(17627210-17627257)
chr3 (111-141)||(27446226-27446256)
chr3 (16-66)||(35094972-35095022)
chr3 (105-203)||(39099189-39099293)
chr3 (111-141)||(47924379-47924409)
chr3 (111-141)||(50755205-50755235)
chr3 (112-141)||(3475301-3475330)
chr3 (112-141)||(6097578-6097607)
chr3 (112-141)||(8036802-8036831)
chr3 (112-141)||(8719150-8719179)
chr3 (112-141)||(9071037-9071066)
chr3 (112-141)||(9106410-9106439)
chr3 (112-141)||(9595874-9595903)
chr3 (112-141)||(10986495-10986524)
chr3 (112-141)||(12974014-12974043)
chr3 (112-141)||(12974203-12974232)
chr3 (24-65)||(13495318-13495359)
chr3 (112-141)||(17620738-17620767)
chr3 (112-141)||(19284814-19284843)
chr3 (112-141)||(27068534-27068563)
chr3 (112-141)||(30947805-30947834)
chr3 (112-141)||(34562401-34562430)
chr3 (112-141)||(36185918-36185947)
chr3 (112-141)||(50416482-50416511)
chr3 (112-141)||(50416577-50416606)
chr3 (112-141)||(51361525-51361554)
chr3 (112-141)||(54379305-54379334)
chr3 (113-141)||(2941821-2941849)
chr3 (112-140)||(36185728-36185756)
chr3 (16-64)||(37444163-37444211)
[»] chr6 (33 HSPs)
chr6 (272-441)||(24737415-24737587)
chr6 (285-438)||(877387-877540)
chr6 (272-441)||(33346097-33346265)
chr6 (105-193)||(33346350-33346436)
chr6 (105-193)||(29157226-29157312)
chr6 (105-203)||(34399641-34399737)
chr6 (105-180)||(15034965-15035040)
chr6 (105-180)||(35119239-35119310)
chr6 (108-163)||(12394387-12394442)
chr6 (134-203)||(18611218-18611285)
chr6 (105-138)||(2759826-2759859)
chr6 (16-65)||(5363005-5363054)
chr6 (16-65)||(12454082-12454131)
chr6 (135-203)||(24737660-24737726)
chr6 (16-65)||(26602543-26602592)
chr6 (16-64)||(2086949-2086997)
chr6 (16-66)||(31791027-31791078)
chr6 (19-65)||(2830793-2830839)
chr6 (19-65)||(22974685-22974731)
chr6 (19-65)||(23813670-23813716)
chr6 (112-141)||(6900946-6900975)
chr6 (112-141)||(7765417-7765446)
chr6 (112-141)||(10588966-10588995)
chr6 (112-141)||(14237780-14237809)
chr6 (112-141)||(15493317-15493346)
chr6 (112-141)||(18755665-18755694)
chr6 (112-141)||(19284373-19284402)
chr6 (112-141)||(20522861-20522890)
chr6 (112-141)||(21385002-21385031)
chr6 (112-141)||(22857490-22857519)
chr6 (112-141)||(34869957-34869986)
chr6 (317-361)||(5995689-5995733)
chr6 (112-140)||(25119484-25119512)
[»] scaffold0097 (2 HSPs)
scaffold0097 (104-203)||(13612-13709)
scaffold0097 (279-322)||(13820-13863)
[»] scaffold0238 (2 HSPs)
scaffold0238 (103-197)||(25207-25299)
scaffold0238 (272-323)||(25068-25119)
[»] scaffold0544 (1 HSPs)
scaffold0544 (106-177)||(10668-10739)
[»] scaffold0337 (1 HSPs)
scaffold0337 (108-194)||(7020-7104)
[»] scaffold0189 (1 HSPs)
scaffold0189 (105-167)||(11193-11255)
[»] scaffold0194 (2 HSPs)
scaffold0194 (279-323)||(27816-27860)
scaffold0194 (105-193)||(27607-27693)
[»] scaffold0061 (1 HSPs)
scaffold0061 (16-65)||(52891-52940)
[»] scaffold0017 (1 HSPs)
scaffold0017 (16-65)||(145694-145743)
[»] scaffold0011 (1 HSPs)
scaffold0011 (16-65)||(13102-13151)
[»] scaffold0338 (1 HSPs)
scaffold0338 (111-147)||(6520-6556)
[»] scaffold0206 (1 HSPs)
scaffold0206 (317-408)||(19467-19557)
[»] scaffold0581 (1 HSPs)
scaffold0581 (105-170)||(8421-8487)
[»] scaffold0571 (1 HSPs)
scaffold0571 (112-141)||(547-576)
[»] scaffold0516 (1 HSPs)
scaffold0516 (112-141)||(1261-1290)
[»] scaffold0249 (2 HSPs)
scaffold0249 (112-141)||(23546-23575)
scaffold0249 (113-141)||(23748-23776)
[»] scaffold0129 (1 HSPs)
scaffold0129 (112-141)||(20133-20162)
[»] scaffold0102 (1 HSPs)
scaffold0102 (112-141)||(33618-33647)
[»] scaffold0074 (1 HSPs)
scaffold0074 (112-141)||(24417-24446)
[»] scaffold1450 (1 HSPs)
scaffold1450 (112-140)||(752-780)
[»] scaffold0009 (1 HSPs)
scaffold0009 (113-141)||(51908-51936)


Alignment Details
Target: chr2 (Bit Score: 154; Significance: 2e-81; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 272 - 441
Target Start/End: Complemental strand, 4579720 - 4579551
Alignment:
Q  272 ctacaattcagatgagtcttcatctcttccggccacacatgatgattccggcacggcggccgccggtggcaccaccgcgccggatttcaatactccatcc 371  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| ||||||||||| |||    
T  4579720 ctacaattcagatgagtcttcatctcttccggccacacatgatgattccggcacgacggccgccggtggcaccaccgcgctggagttcaatactccgtcc 4579621  T
Q  372 aaatcaaaaagttttcacggttttagacatccttttttgtgttgattccaaatatcgccttagatttctc 441  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4579620 aaatcaaaaagttttcacggttttagacatccttttttgtgttgattccaaatatcgccttagatttctc 4579551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 272 - 441
Target Start/End: Original strand, 25193063 - 25193231
Alignment:
Q  272 ctacaattcagatgagtcttcatctcttccggccacacatgatgattccggcacggcggccgccggtggcaccaccgcgccggatttcaatactccatcc 371  Q
    |||||||||| | |||||||||||||||||||||||||||||||||||  || | | |||||  |||||||||||||||||||| ||||| | |||||||    
T  25193063 ctacaattcatacgagtcttcatctcttccggccacacatgatgattctagcgcagtggccggtggtggcaccaccgcgccggagttcaaaattccatcc 25193162  T
Q  372 aaatcaaaaagttttcacggttttagacatccttttttgtgttgattccaaatatcgccttagatttctc 441  Q
    ||||||||||   | |||||||||||||||||||||||||||||||| || |||||||||||||||||||    
T  25193163 aaatcaaaaaaaat-cacggttttagacatccttttttgtgttgatttcatatatcgccttagatttctc 25193231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 16 - 214
Target Start/End: Complemental strand, 4579950 - 4579776
Alignment:
Q  16 caatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaaatatcgattattattataatgaagctgggctgcactgttggcaaaagtta 115  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||||||| | | |||||||||||||||||||| |||||||||                  
T  4579950 caatattacacatgttaaggaaactaaatatagtaacttttcattgaaaaacaccaattattattataatgaagctcggctgcact-------------- 4579865  T
Q  116 tggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatcttatgcttcatttctacact 214  Q
            |||||||||||||||||| ||||| |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  4579864 --------aaggaaatccttatgcaccatgcataaacactttacaaccatcagatctagtgt--acacgtgtaataatcttatgcttcatttctacact 4579776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 105 - 203
Target Start/End: Complemental strand, 18298176 - 18298080
Alignment:
Q  105 ggcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatcttatgcttc 203  Q
    |||||||||||||||||||||||||||||||||||||  |||| |||||||| ||||||||||||||||||||  ||||||||||||||| || |||||    
T  18298176 ggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaaccatcagatctagtgt--acacgtgtaataatcctaggcttc 18298080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 104 - 203
Target Start/End: Original strand, 20709773 - 20709870
Alignment:
Q  104 tggcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatcttatgcttc 203  Q
    |||||||||||||||||||||||||||||||||| |||  |||| |||||||| |||||||||||||||||||||||||  |||||||||| || |||||    
T  20709773 tggcaaaagttatggtgcataaggaaatccttatccaccgtgcataaacacttcacaaccatcagatctagtgtacaca--tgtaataatcctacgcttc 20709870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 105 - 193
Target Start/End: Original strand, 25192892 - 25192978
Alignment:
Q  105 ggcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataat 193  Q
    |||||||||||||||||||||||||||||||||||||  |||| |||||||| |||||||| |||||||||||  ||||||||||||||    
T  25192892 ggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaaccattagatctagtgt--acacgtgtaataat 25192978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 106 - 204
Target Start/End: Complemental strand, 14551382 - 14551287
Alignment:
Q  106 gcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatcttatgcttca 204  Q
    |||||||||||||||||||||||||| |||||||||  |||| |||||||| ||||||||||||||||||||  ||| ||||||||||| || ||||||    
T  14551382 gcaaaagttatggtgcataaggaaattcttatgcac-gtgcataaacacttcacaaccatcagatctagtgt--acatgtgtaataatcctaggcttca 14551287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 272 - 337
Target Start/End: Complemental strand, 18298005 - 18297940
Alignment:
Q  272 ctacaattcagatgagtcttcatctcttccggccacacatgatgattccggcacggcggccgccgg 337  Q
    |||||||| |||||||||||||||||||||| |||||||||||||||||||| ||| || ||||||    
T  18298005 ctacaatttagatgagtcttcatctcttccgaccacacatgatgattccggcgcggtggtcgccgg 18297940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 279 - 322
Target Start/End: Original strand, 20709981 - 20710024
Alignment:
Q  279 tcagatgagtcttcatctcttccggccacacatgatgattccgg 322  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    
T  20709981 tcagatgagtcttcatctcttccggtcacacatgatgattccgg 20710024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 16126720 - 16126671
Alignment:
Q  16 caatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 65  Q
    ||||||| |||||||||||| ||||||| |||||||||||||||||||||    
T  16126720 caatattgcacatgttaaggtaactaaaagtagtaatttttcattgaaaa 16126671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 19228442 - 19228491
Alignment:
Q  16 caatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 65  Q
    ||||||| |||||||||||| ||||||| ||||||| |||||||||||||    
T  19228442 caatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaa 19228491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 22705471 - 22705520
Alignment:
Q  16 caatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 65  Q
    ||||||| |||||||||||| ||||||| ||||||| |||||||||||||    
T  22705471 caatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaa 22705520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 27665205 - 27665156
Alignment:
Q  16 caatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 65  Q
    ||||||| |||||||||||| ||||||| ||||||| |||||||||||||    
T  27665205 caatattgcacatgttaaggcaactaaaagtagtaacttttcattgaaaa 27665156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 39904209 - 39904160
Alignment:
Q  16 caatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 65  Q
    ||||||| |||||||||||| ||||||| ||||||| |||||||||||||    
T  39904209 caatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaa 39904160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 131 - 194
Target Start/End: Complemental strand, 4281827 - 4281766
Alignment:
Q  131 tccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatc 194  Q
    |||||||| ||| || | |||||||| ||||||||||||||||||||  |||||||||||||||    
T  4281827 tccttatgtactctgtataaacacttcacaaccatcagatctagtgt--acacgtgtaataatc 4281766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 131 - 194
Target Start/End: Original strand, 25995313 - 25995374
Alignment:
Q  131 tccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatc 194  Q
    |||||||||||| |||| ||| |||| ||||||||||||| ||||||  |||||||||||||||    
T  25995313 tccttatgcactctgcataaatacttcacaaccatcagatttagtgt--acacgtgtaataatc 25995374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 455 - 514
Target Start/End: Complemental strand, 4579542 - 4579483
Alignment:
Q  455 ctcacacgagcgcagatctacgagtnnnnnnncggaacaaaaagagaaaataaactacct 514  Q
    |||||||||||| |||||||| |||       ||||||||||||||||||||||||||||    
T  4579542 ctcacacgagcgtagatctacaagtaaaaaaacggaacaaaaagagaaaataaactacct 4579483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 16 - 66
Target Start/End: Complemental strand, 15411784 - 15411734
Alignment:
Q  16 caatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaaa 66  Q
    ||||||| |||||||||| | ||||||| |||||||||||| |||||||||    
T  15411784 caatattgcacatgttaaagtaactaaaagtagtaattttttattgaaaaa 15411734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 111 - 141
Target Start/End: Original strand, 19246663 - 19246693
Alignment:
Q  111 agttatggtgcataaggaaatccttatgcac 141  Q
    |||||||||||||||||||||||||||||||    
T  19246663 agttatggtgcataaggaaatccttatgcac 19246693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 28 - 66
Target Start/End: Original strand, 36731208 - 36731246
Alignment:
Q  28 tgttaaggaaactaaatgtagtaatttttcattgaaaaa 66  Q
    ||||||| |||||||||||||||| ||||||||||||||    
T  36731208 tgttaagaaaactaaatgtagtaacttttcattgaaaaa 36731246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Original strand, 1292073 - 1292102
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  1292073 gttatggtgcataaggaaatccttatgcac 1292102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Original strand, 7487148 - 7487177
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  7487148 gttatggtgcataaggaaatccttatgcac 7487177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 12016683 - 12016732
Alignment:
Q  16 caatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 65  Q
    ||||||| |||||||||||| ||||||| ||||||| |||| ||||||||    
T  12016683 caatattgcacatgttaaggtaactaaaagtagtaactttttattgaaaa 12016732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Original strand, 12449056 - 12449085
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  12449056 gttatggtgcataaggaaatccttatgcac 12449085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 14377441 - 14377490
Alignment:
Q  16 caatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 65  Q
    ||||||| |||||||||||| ||||||| ||||||| |||| ||||||||    
T  14377441 caatattgcacatgttaaggcaactaaaagtagtaactttttattgaaaa 14377490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 16123295 - 16123344
Alignment:
Q  16 caatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 65  Q
    ||||||| |||||||||||| ||||||| | ||||| |||||||||||||    
T  16123295 caatattgcacatgttaaggtaactaaaagaagtaacttttcattgaaaa 16123344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Original strand, 20661398 - 20661427
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  20661398 gttatggtgcataaggaaatccttatgcac 20661427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Complemental strand, 24183639 - 24183610
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  24183639 gttatggtgcataaggaaatccttatgcac 24183610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Original strand, 31783795 - 31783824
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  31783795 gttatggtgcataaggaaatccttatgcac 31783824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Complemental strand, 31784027 - 31783998
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  31784027 gttatggtgcataaggaaatccttatgcac 31783998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Original strand, 34726606 - 34726635
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  34726606 gttatggtgcataaggaaatccttatgcac 34726635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Complemental strand, 39355207 - 39355178
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  39355207 gttatggtgcataaggaaatccttatgcac 39355178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Original strand, 41345089 - 41345118
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  41345089 gttatggtgcataaggaaatccttatgcac 41345118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 115 - 147
Target Start/End: Complemental strand, 8150000 - 8149968
Alignment:
Q  115 atggtgcataaggaaatccttatgcactatgca 147  Q
    ||||||||||||||||||||||||||| |||||    
T  8150000 atggtgcataaggaaatccttatgcaccatgca 8149968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 115 - 147
Target Start/End: Complemental strand, 8154624 - 8154592
Alignment:
Q  115 atggtgcataaggaaatccttatgcactatgca 147  Q
    ||||||||||||||||||||||||||| |||||    
T  8154624 atggtgcataaggaaatccttatgcaccatgca 8154592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Original strand, 25575325 - 25575353
Alignment:
Q  112 gttatggtgcataaggaaatccttatgca 140  Q
    |||||||||||||||||||||||||||||    
T  25575325 gttatggtgcataaggaaatccttatgca 25575353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 26230014 - 26229974
Alignment:
Q  16 caatattacacatgttaaggaaactaaatgtagtaattttt 56  Q
    ||||||| |||||||||||| ||||||| ||||||||||||    
T  26230014 caatattgcacatgttaaggtaactaaaagtagtaattttt 26229974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 146; Significance: 1e-76; HSPs: 56)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 272 - 441
Target Start/End: Complemental strand, 39658437 - 39658268
Alignment:
Q  272 ctacaattcagatgagtcttcatctcttccggccacacatgatgattccggcacggcggccgccggtggcaccaccgcgccggatttcaatactccatcc 371  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||| |||    
T  39658437 ctacaattcaaatgagtcttcatctcttccggccacacatgatgattccggcacggcggccgccggtgtcaccaccgcgccggagttcaaaactccgtcc 39658338  T
Q  372 aaatcaaaaagttttcacggttttagacatccttttttgtgttgattccaaatatcgccttagatttctc 441  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39658337 gaatcaaaaagttttcacggttttagacatccttttttgtgttgattccaaatatcgccttagatttctc 39658268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 272 - 440
Target Start/End: Complemental strand, 4836595 - 4836427
Alignment:
Q  272 ctacaattcagatgagtcttcatctcttccggccacacatgatgattccggcacggcggccgccggtggcaccaccgcgccggatttcaatactccatcc 371  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  || |||||  |||||||||||||||||||| ||||| ||||| |||    
T  4836595 ctacaattcagatgagtcttcatctcttccggccacacatgatgattccggcgtggtggccggtggtggcaccaccgcgccggagttcaaaactccgtcc 4836496  T
Q  372 aaatcaaaaagttttcacggttttagacatccttttttgtgttgattccaaatatcgccttagatttct 440  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| ||||||    
T  4836495 aaatcaaaaagttttcacggttttagacatccttttttgcgttgattccaaatattgccttaaatttct 4836427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 272 - 440
Target Start/End: Complemental strand, 4842040 - 4841872
Alignment:
Q  272 ctacaattcagatgagtcttcatctcttccggccacacatgatgattccggcacggcggccgccggtggcaccaccgcgccggatttcaatactccatcc 371  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  || |||||  |||||||||||||||||||| ||||| ||||| |||    
T  4842040 ctacaattcagatgagtcttcatctcttccggccacacatgatgattccggcgtggtggccggtggtggcaccaccgcgccggagttcaaaactccgtcc 4841941  T
Q  372 aaatcaaaaagttttcacggttttagacatccttttttgtgttgattccaaatatcgccttagatttct 440  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| ||||||    
T  4841940 aaatcaaaaagttttcacggttttagacatccttttttgcgttgattccaaatattgccttaaatttct 4841872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 272 - 441
Target Start/End: Original strand, 2750198 - 2750365
Alignment:
Q  272 ctacaattcagatgagtcttcatctcttccggccacacatgatgattccggcacggcggccgccggtggcaccaccgcgccggatttcaatactccatcc 371  Q
    |||||||||||||||||||||||||||||||||||||| |  ||||||| || ||| |||||  ||||| |||||||||||||| ||||| ||||| |||    
T  2750198 ctacaattcagatgagtcttcatctcttccggccacacgt--tgattccagcgcggtggccggtggtggaaccaccgcgccggagttcaaaactccgtcc 2750295  T
Q  372 aaatcaaaaagttttcacggttttagacatccttttttgtgttgattccaaatatcgccttagatttctc 441  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2750296 aaatcaaaaagttttcatggttttagacatccttttttgtgttgattccaaatatcgccttagatttctc 2750365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 272 - 440
Target Start/End: Original strand, 1208870 - 1209039
Alignment:
Q  272 ctacaattcagatgagtcttcatctcttccggccacacatgatgattccggcacggcggccgccggtggcaccaccgcgccggatttcaatactccatcc 371  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| || | ||| ||||| ||||| |||    
T  1208870 ctacaattcagatgagtcttcatctcttgcggccacacatgatgattccagcacggcggccgccggtggcaccactgctctggagttcaaaactccgtcc 1208969  T
Q  372 aaatcaaaaagtt-ttcacggttttagacatccttttttgtgttgattccaaatatcgccttagatttct 440  Q
    |||| |||||    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1208970 aaataaaaaaaaaattcatggttttagacatccttttttgtgttgattccaaatatcgccttagatttct 1209039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 272 - 441
Target Start/End: Original strand, 8550675 - 8550838
Alignment:
Q  272 ctacaattcagatgagtcttcatctcttccggccacacatgatgattccggcacggcggccgccggtggcaccaccgcgccggatttcaatactccatcc 371  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||| ||       ||| |||||||||||||| ||||| ||||| |||    
T  8550675 ctacaattcagatgagtcttcatctcttacggccacacatgatgattctggcgcggtgg-------tggtaccaccgcgccggagttcaaaactccgtcc 8550767  T
Q  372 aaatcaaaaagtt-ttcacggttttagacatccttttttgtgttgattccaaatatcgccttagatttctc 441  Q
    |||| |||||    |||||||||||||||||| |||||||||||||||||||||||| |||||||||||||    
T  8550768 aaataaaaaaaaaattcacggttttagacatctttttttgtgttgattccaaatatcaccttagatttctc 8550838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 272 - 441
Target Start/End: Original strand, 7058285 - 7058443
Alignment:
Q  272 ctacaattcagatgagtcttcatctcttccggccacacatgatgattccggcacggcggccgccggtggcaccaccgcgccggatttcaatactccatcc 371  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| ||| | |          ||||| |||||||||||| ||||| ||||| |||    
T  7058285 ctacaattcagatgagtcttcatctctttcggccacacatgatgattctggcgcag----------tggcatcaccgcgccggagttcaaaactccgtcc 7058374  T
Q  372 aaatcaaaaagttttcacggttttagacatccttttttgtgttgattccaaatatcgccttagatttctc 441  Q
    |||| |||||   | |||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7058375 aaataaaaaaaaat-cacgattttagacatccttttttgtgttgattccaaatatcgccttagatttctc 7058443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 104 - 212
Target Start/End: Original strand, 1208708 - 1208814
Alignment:
Q  104 tggcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatcttatgcttc 203  Q
    ||||||||||||||||||||||||||||||||||||||  |||| ||||||||||||||||| |||||||||||  ||||||||||||||| || |||||    
T  1208708 tggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaacactttacaaccataagatctagtgt--acacgtgtaataatcctaggcttc 1208805  T
Q  204 atttctaca 212  Q
    || ||||||    
T  1208806 atctctaca 1208814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 103 - 203
Target Start/End: Complemental strand, 32987512 - 32987414
Alignment:
Q  103 ttggcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatcttatgctt 202  Q
    |||||||||||||||||||||||||||||||||||||||  |||| |||||||| ||||||||||||||||||||  ||||||||||||||| || ||||    
T  32987512 ttggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaaccatcagatctagtgt--acacgtgtaataatcctaggctt 32987415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 105 - 180
Target Start/End: Original strand, 39021975 - 39022050
Alignment:
Q  105 ggcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtaca 180  Q
    |||||||||||||||||||||||||||||||||||||  |||| |||||||| |||| ||||||||||||||||||    
T  39021975 ggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaatcatcagatctagtgtaca 39022050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 105 - 194
Target Start/End: Original strand, 7058114 - 7058201
Alignment:
Q  105 ggcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatc 194  Q
    ||||||||||||||||||||||||||| |||||||||  |||| |||||||| ||||||||| ||||||||||  |||||||||||||||    
T  7058114 ggcaaaagttatggtgcataaggaaatacttatgcaccgtgcataaacacttcacaaccatccgatctagtgt--acacgtgtaataatc 7058201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 109 - 194
Target Start/End: Complemental strand, 4836762 - 4836679
Alignment:
Q  109 aaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatc 194  Q
    ||||||||||||||||| ||||| |||||||||  |||| |||||||| ||||||||||||||||||||  |||||||||||||||    
T  4836762 aaagttatggtgcataaagaaatgcttatgcaccgtgcataaacacttcacaaccatcagatctagtgt--acacgtgtaataatc 4836679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 109 - 194
Target Start/End: Complemental strand, 4842207 - 4842124
Alignment:
Q  109 aaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatc 194  Q
    ||||||||||||||||| ||||| |||||||||  |||| |||||||| ||||||||||||||||||||  |||||||||||||||    
T  4842207 aaagttatggtgcataaagaaatgcttatgcaccgtgcataaacacttcacaaccatcagatctagtgt--acacgtgtaataatc 4842124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 105 - 170
Target Start/End: Original strand, 42433701 - 42433766
Alignment:
Q  105 ggcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagat 170  Q
    |||||||||||||||||||||||||||||||||||||  |||| || ||||| |||||||||||||    
T  42433701 ggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataagcacttcacaaccatcagat 42433766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 105 - 172
Target Start/End: Complemental strand, 40012247 - 40012180
Alignment:
Q  105 ggcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatct 172  Q
    ||||||||||||||||||||||||  ||||||||||| ||||| ||| |||||||||||||| |||||    
T  40012247 ggcaaaagttatggtgcataaggatttccttatgcaccatgcataaagactttacaaccatcggatct 40012180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 105 - 181
Target Start/End: Complemental strand, 15260917 - 15260840
Alignment:
Q  105 ggcaaaagttatggtgcataaggaaat-ccttatgcactatgcagaaacactttacaaccatcagatctagtgtacac 181  Q
    ||||||||||||||||||||||||  | ||||||||||  |||| |||||||| |||||||||| |||||||||||||    
T  15260917 ggcaaaagttatggtgcataaggattttccttatgcaccgtgcataaacacttcacaaccatcaaatctagtgtacac 15260840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 281 - 321
Target Start/End: Original strand, 39022186 - 39022226
Alignment:
Q  281 agatgagtcttcatctcttccggccacacatgatgattccg 321  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  39022186 agatgagtcttcatctcttccggccacacatgatgattccg 39022226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 130 - 203
Target Start/End: Original strand, 7614093 - 7614164
Alignment:
Q  130 atccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatcttatgcttc 203  Q
    |||||||||||| ||||| |||||||| |||||||||||||||| |||  ||||||||||||||| || |||||    
T  7614093 atccttatgcaccatgcataaacacttcacaaccatcagatctaatgt--acacgtgtaataatcataggcttc 7614164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 131 - 203
Target Start/End: Original strand, 8550530 - 8550600
Alignment:
Q  131 tccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatcttatgcttc 203  Q
    |||||||||||  |||| |||||||| ||||||||||||||||||||  ||||||||||||||| || |||||    
T  8550530 tccttatgcaccgtgcataaacacttcacaaccatcagatctagtgt--acacgtgtaataatcataagcttc 8550600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 279 - 319
Target Start/End: Complemental strand, 15260707 - 15260667
Alignment:
Q  279 tcagatgagtcttcatctcttccggccacacatgatgattc 319  Q
    |||||||||||||||||||||||||||||| ||||||||||    
T  15260707 tcagatgagtcttcatctcttccggccacatatgatgattc 15260667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 131 - 197
Target Start/End: Original strand, 15181817 - 15181881
Alignment:
Q  131 tccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatctta 197  Q
    |||||||||||  |||| |||||||| |||| |||||||||||||||  ||||||||||||||||||    
T  15181817 tccttatgcaccctgcataaacacttcacaagcatcagatctagtgt--acacgtgtaataatctta 15181881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 10129120 - 10129169
Alignment:
Q  16 caatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 65  Q
    ||||||| |||||||||||| |||||||  ||||||||||||||||||||    
T  10129120 caatattgcacatgttaaggtaactaaaattagtaatttttcattgaaaa 10129169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 35678436 - 35678387
Alignment:
Q  16 caatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 65  Q
    ||||||| |||||||||| ||||||||| ||||||| |||||||||||||    
T  35678436 caatattgcacatgttaaagaaactaaaagtagtaacttttcattgaaaa 35678387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 65
Target Start/End: Complemental strand, 4080554 - 4080506
Alignment:
Q  17 aatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 65  Q
    |||||| ||||||||||||||| |||| ||||||| |||||||||||||    
T  4080554 aatattgcacatgttaaggaaagtaaaagtagtaacttttcattgaaaa 4080506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 65
Target Start/End: Complemental strand, 4084703 - 4084655
Alignment:
Q  17 aatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 65  Q
    |||||| ||||||||||||||| |||| ||||||| |||||||||||||    
T  4084703 aatattgcacatgttaaggaaagtaaaagtagtaacttttcattgaaaa 4084655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 65
Target Start/End: Complemental strand, 4103010 - 4102962
Alignment:
Q  17 aatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 65  Q
    |||||| ||||||||||||||| |||| ||||||| |||||||||||||    
T  4103010 aatattgcacatgttaaggaaagtaaaagtagtaacttttcattgaaaa 4102962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 283 - 323
Target Start/End: Complemental strand, 32987299 - 32987260
Alignment:
Q  283 atgagtcttcatctcttccggccacacatgatgattccggc 323  Q
    |||||||||||||| ||||||||||||||||||||||||||    
T  32987299 atgagtcttcatct-ttccggccacacatgatgattccggc 32987260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 147
Target Start/End: Original strand, 185883 - 185918
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcactatgca 147  Q
    ||||||||||||||||||||||||||||||| ||||    
T  185883 gttatggtgcataaggaaatccttatgcactctgca 185918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 147
Target Start/End: Original strand, 17656620 - 17656655
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcactatgca 147  Q
    ||||||||||||||||||||||||||||||| ||||    
T  17656620 gttatggtgcataaggaaatccttatgcactctgca 17656655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 147
Target Start/End: Complemental strand, 23397485 - 23397450
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcactatgca 147  Q
    |||||||||||||||||||||||||||||| |||||    
T  23397485 gttatggtgcataaggaaatccttatgcaccatgca 23397450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 147
Target Start/End: Original strand, 23567488 - 23567523
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcactatgca 147  Q
    ||||||||||||||||||||||||||||||| ||||    
T  23567488 gttatggtgcataaggaaatccttatgcactctgca 23567523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 105 - 170
Target Start/End: Original strand, 15227030 - 15227096
Alignment:
Q  105 ggcaaaagttatggtgcataaggaaat-ccttatgcactatgcagaaacactttacaaccatcagat 170  Q
    ||||||||||||||||||||||  | | ||||||||||  |||| |||||| |||||||||||||||    
T  15227030 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacattacaaccatcagat 15227096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 111 - 141
Target Start/End: Original strand, 18161289 - 18161319
Alignment:
Q  111 agttatggtgcataaggaaatccttatgcac 141  Q
    |||||||||||||||||||||||||||||||    
T  18161289 agttatggtgcataaggaaatccttatgcac 18161319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 111 - 141
Target Start/End: Original strand, 27506707 - 27506737
Alignment:
Q  111 agttatggtgcataaggaaatccttatgcac 141  Q
    |||||||||||||||||||||||||||||||    
T  27506707 agttatggtgcataaggaaatccttatgcac 27506737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 112 - 142
Target Start/End: Original strand, 40022390 - 40022420
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcact 142  Q
    |||||||||||||||||||||||||||||||    
T  40022390 gttatggtgcataaggaaatccttatgcact 40022420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Original strand, 1149917 - 1149946
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  1149917 gttatggtgcataaggaaatccttatgcac 1149946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Complemental strand, 1672973 - 1672944
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  1672973 gttatggtgcataaggaaatccttatgcac 1672944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Original strand, 4835520 - 4835549
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  4835520 gttatggtgcataaggaaatccttatgcac 4835549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 7140620 - 7140571
Alignment:
Q  16 caatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 65  Q
    ||||||| |||||||||||| ||||||| ||||||| |||| ||||||||    
T  7140620 caatattgcacatgttaaggtaactaaaagtagtaactttttattgaaaa 7140571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Complemental strand, 10237526 - 10237497
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  10237526 gttatggtgcataaggaaatccttatgcac 10237497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 13328102 - 13328053
Alignment:
Q  16 caatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 65  Q
    ||||||| || ||||||||| ||||||| ||||||| |||||||||||||    
T  13328102 caatattgcatatgttaaggtaactaaaagtagtaacttttcattgaaaa 13328053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Complemental strand, 15227202 - 15227173
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  15227202 gttatggtgcataaggaaatccttatgcac 15227173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Complemental strand, 15809882 - 15809853
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  15809882 gttatggtgcataaggaaatccttatgcac 15809853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Complemental strand, 17792934 - 17792905
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  17792934 gttatggtgcataaggaaatccttatgcac 17792905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 19343998 - 19343949
Alignment:
Q  16 caatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 65  Q
    ||||||| |||||||||||| ||| ||| ||||||| |||||||||||||    
T  19343998 caatattgcacatgttaaggtaaccaaaagtagtaacttttcattgaaaa 19343949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Complemental strand, 24473286 - 24473257
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  24473286 gttatggtgcataaggaaatccttatgcac 24473257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Original strand, 34633215 - 34633244
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  34633215 gttatggtgcataaggaaatccttatgcac 34633244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Original strand, 34647173 - 34647202
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  34647173 gttatggtgcataaggaaatccttatgcac 34647202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Original strand, 35301631 - 35301660
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  35301631 gttatggtgcataaggaaatccttatgcac 35301660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Complemental strand, 35448652 - 35448623
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  35448652 gttatggtgcataaggaaatccttatgcac 35448623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 38527837 - 38527886
Alignment:
Q  16 caatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 65  Q
    ||||||| |||||||||||| ||||||| ||| ||| |||||||||||||    
T  38527837 caatattgcacatgttaaggcaactaaaagtaataacttttcattgaaaa 38527886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Original strand, 39657710 - 39657739
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  39657710 gttatggtgcataaggaaatccttatgcac 39657739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 39701964 - 39701915
Alignment:
Q  16 caatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 65  Q
    ||||||| |||||||||||| ||||||| ||||||| ||||| |||||||    
T  39701964 caatattgcacatgttaaggtaactaaaagtagtaacttttcgttgaaaa 39701915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 113 - 141
Target Start/End: Complemental strand, 1209827 - 1209799
Alignment:
Q  113 ttatggtgcataaggaaatccttatgcac 141  Q
    |||||||||||||||||||||||||||||    
T  1209827 ttatggtgcataaggaaatccttatgcac 1209799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 64
Target Start/End: Complemental strand, 3306216 - 3306168
Alignment:
Q  16 caatattacacatgttaaggaaactaaatgtagtaatttttcattgaaa 64  Q
    ||||||| |||||||||||| ||||||| ||||||| |||| |||||||    
T  3306216 caatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaa 3306168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 65
Target Start/End: Original strand, 8140593 - 8140633
Alignment:
Q  25 acatgttaaggaaactaaatgtagtaatttttcattgaaaa 65  Q
    ||||||||||| ||||||| ||||| |||||||||||||||    
T  8140593 acatgttaaggcaactaaaagtagtgatttttcattgaaaa 8140633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 142; Significance: 3e-74; HSPs: 60)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 272 - 441
Target Start/End: Original strand, 48691155 - 48691324
Alignment:
Q  272 ctacaattcagatgagtcttcatctcttccggccacacatgatgattccggcacggcggccgccggtggcaccaccgcgccggatttcaatactccatcc 371  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |  |||||||| ||||| | |    
T  48691155 ctacaattcagatgagtcttcatctcttccggccacacatgatgattccggcacggcggccgccggtggcaccaccgcactagatttcaaaactccgttc 48691254  T
Q  372 aaatcaaaaagttttcacggttttagacatccttttttgtgttgattccaaatatcgccttagatttctc 441  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  48691255 aaatcaaaaagttttcacggttttagacatccttttttgtgttgatttcaaatatcgccttagatttctc 48691324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 272 - 441
Target Start/End: Original strand, 48305399 - 48305566
Alignment:
Q  272 ctacaattcagatgagtcttcatctcttccggccacacatgatgattccggcacggcggccgccggtggcaccaccgcgccggatttcaatactccatcc 371  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||| |||    
T  48305399 ctacaattcagatgagtcttcatcacttccggccacacatgatgattccggcacggcggccgtcggtggcaccaccgcgccggagttcaaaactccgtcc 48305498  T
Q  372 aaatcaaaaagttttcacggttttagacatccttttttgtgttgattccaaatatcgccttagatttctc 441  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| ||||||||||||    
T  48305499 aaatcaaaaagttttcacggttttagacatcc--ttttgtgttgattccaaatatcgtcttagatttctc 48305566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 273 - 441
Target Start/End: Complemental strand, 15974829 - 15974662
Alignment:
Q  273 tacaattcagatgagtcttcatctcttccggccacacatgatgattccggcacggcggccgccggtggcaccaccgcgccggatttcaatactccatcca 372  Q
    ||||| ||||||||||||||||||||||||  ||||||||||||||||||| ||| |||||  |||||||||||||||||||| ||||| ||||| ||||    
T  15974829 tacaagtcagatgagtcttcatctcttccgatcacacatgatgattccggcgcggtggccggtggtggcaccaccgcgccggagttcaaaactccgtcca 15974730  T
Q  373 aatcaaaaagttttcacggttttagacatccttttttgtgttgattccaaatatcgccttagatttctc 441  Q
    ||| |||||   || ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15974729 aataaaaaaaaatt-acggttttagacatccttttttgtgttgattccaaatatcgccttagatttctc 15974662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 275 - 361
Target Start/End: Original strand, 28396888 - 28396974
Alignment:
Q  275 caattcagatgagtcttcatctcttccggccacacatgatgattccggcacggcggccgccggtggcaccaccgcgccggatttcaa 361  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  28396888 caattcagatgagtcttcatctcttccggccacacatgatgattccggcacggcggccgccggtggcaccaccgcgccggagttcaa 28396974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 103 - 203
Target Start/End: Original strand, 30428871 - 30428969
Alignment:
Q  103 ttggcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatcttatgctt 202  Q
    |||||||||||||||||||||||||||||||||||||||  |||| ||||| || ||||||||||||||||||||  ||||||||||||||| || ||||    
T  30428871 ttggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaacatttcacaaccatcagatctagtgt--acacgtgtaataatcctaggctt 30428968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 103 - 202
Target Start/End: Complemental strand, 15975003 - 15974906
Alignment:
Q  103 ttggcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatcttatgctt 202  Q
    |||||||||||||||||||||||||||||||||||||||  |||| |||||||| |||||||||| || |||||||||||  ||||||||||||| ||||    
T  15975003 ttggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaaccatcatatttagtgtacaca--tgtaataatcttaggctt 15974906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 105 - 211
Target Start/End: Original strand, 48690895 - 48690999
Alignment:
Q  105 ggcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatcttatgcttca 204  Q
    ||||||||||||||||||||| |||||||||||||||  |||| ||||| || |||||||||| |||||||||  ||||||||||||||| || ||||||    
T  48690895 ggcaaaagttatggtgcataaagaaatccttatgcaccgtgcataaacagttcacaaccatcaaatctagtgt--acacgtgtaataatcataggcttca 48690992  T
Q  205 tttctac 211  Q
    | |||||    
T  48690993 tctctac 48690999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 103 - 194
Target Start/End: Original strand, 46024025 - 46024114
Alignment:
Q  103 ttggcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatc 194  Q
    |||||||||||||||||||| ||| ||||||||||||||  |||| |||||||| ||||||||||||| ||||||  |||||||||||||||    
T  46024025 ttggcaaaagttatggtgcacaagaaaatccttatgcaccgtgcataaacacttcacaaccatcagatatagtgt--acacgtgtaataatc 46024114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 105 - 178
Target Start/End: Original strand, 12279745 - 12279818
Alignment:
Q  105 ggcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgta 178  Q
    |||||||||||||||||||||||||||| ||||||||  |||| ||| |||| |||||||| ||||||||||||    
T  12279745 ggcaaaagttatggtgcataaggaaatctttatgcaccgtgcataaagacttcacaaccattagatctagtgta 12279818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 104 - 181
Target Start/End: Original strand, 48305236 - 48305312
Alignment:
Q  104 tggcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtacac 181  Q
    |||||||||||||||||||||||||  |||||||||||  |||| ||||||||||||| |||| ||||||||||||||    
T  48305236 tggcaaaagttatggtgcataaggat-tccttatgcaccgtgcataaacactttacaaacatcggatctagtgtacac 48305312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 105 - 212
Target Start/End: Original strand, 28396722 - 28396827
Alignment:
Q  105 ggcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatcttatgcttca 204  Q
    ||||||||||| | |||||||||||||||||||||||  |||| ||||| || |||| |||||||||||||||  ||| | ||||||||| || ||||||    
T  28396722 ggcaaaagttacgatgcataaggaaatccttatgcaccgtgcataaacatttcacaatcatcagatctagtgt--acaagagtaataatcctaggcttca 28396819  T
Q  205 tttctaca 212  Q
    | ||||||    
T  28396820 tctctaca 28396827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 105 - 170
Target Start/End: Original strand, 25778837 - 25778902
Alignment:
Q  105 ggcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagat 170  Q
    |||||||||||||||||||||| |||| |||||||||| |||| || ||||| |||||||||||||    
T  25778837 ggcaaaagttatggtgcataagaaaattcttatgcactgtgcataagcacttcacaaccatcagat 25778902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 279 - 337
Target Start/End: Original strand, 46024236 - 46024294
Alignment:
Q  279 tcagatgagtcttcatctcttccggccacacatgatgattccggcacggcggccgccgg 337  Q
    |||||| ||||||||||||||||| |||||||||||||||||||| ||| || ||||||    
T  46024236 tcagattagtcttcatctcttccgaccacacatgatgattccggcgcggtggtcgccgg 46024294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 272 - 318
Target Start/End: Complemental strand, 46573394 - 46573348
Alignment:
Q  272 ctacaattcagatgagtcttcatctcttccggccacacatgatgatt 318  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||    
T  46573394 ctacaattcagatgagtcttcatctcttcagggcacacatgatgatt 46573348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 39757271 - 39757222
Alignment:
Q  16 caatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 65  Q
    ||||||| |||||||||||| ||||||| |||||||||||||||||||||    
T  39757271 caatattgcacatgttaaggtaactaaaagtagtaatttttcattgaaaa 39757222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 131 - 194
Target Start/End: Original strand, 5757413 - 5757474
Alignment:
Q  131 tccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatc 194  Q
    |||||||||||  |||| |||||||| ||||||||||||||||||||  |||||||||||||||    
T  5757413 tccttatgcaccgtgcataaacacttcacaaccatcagatctagtgt--acacgtgtaataatc 5757474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 105 - 181
Target Start/End: Original strand, 12279641 - 12279717
Alignment:
Q  105 ggcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtacac 181  Q
    ||||||||||||||| |||||||||||| ||||||||  || | ||| |||| |||||||| ||||| |||||||||    
T  12279641 ggcaaaagttatggtacataaggaaatcattatgcaccgtgtataaagacttcacaaccattagatccagtgtacac 12279717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 279 - 321
Target Start/End: Original strand, 30429080 - 30429122
Alignment:
Q  279 tcagatgagtcttcatctcttccggccacacatgatgattccg 321  Q
    ||||| |||||||||||||||||||||| ||||||||||||||    
T  30429080 tcagacgagtcttcatctcttccggccatacatgatgattccg 30429122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 151 - 212
Target Start/End: Original strand, 48691038 - 48691097
Alignment:
Q  151 acactttacaaccatcagatctagtgtacacacgtgtaataatcttatgcttcatttctaca 212  Q
    |||||| ||||||||||||||||||||  ||||||||||||||| || ||||||| ||||||    
T  48691038 acacttcacaaccatcagatctagtgt--acacgtgtaataatcctaggcttcatctctaca 48691097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 9331978 - 9332027
Alignment:
Q  16 caatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 65  Q
    ||||||| |||||||||||| ||||||| ||||||| |||||||||||||    
T  9331978 caatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaa 9332027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 19889357 - 19889406
Alignment:
Q  16 caatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 65  Q
    ||||||| |||||||||||| ||||||| ||||||| |||||||||||||    
T  19889357 caatattgcacatgttaaggcaactaaaagtagtaacttttcattgaaaa 19889406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 24250330 - 24250379
Alignment:
Q  16 caatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 65  Q
    ||||||| |||||||||||||||||||| ||| ||| |||||||||||||    
T  24250330 caatattgcacatgttaaggaaactaaaagtattaacttttcattgaaaa 24250379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 16 - 81
Target Start/End: Original strand, 32117831 - 32117896
Alignment:
Q  16 caatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaaatatcgattattatta 81  Q
    ||||||| ||||||||||||||||||||||||| || ||| ||||| |||| | | ||||||||||    
T  32117831 caatattgcacatgttaaggaaactaaatgtagcaactttgcattggaaaacaccaattattatta 32117896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 36548621 - 36548572
Alignment:
Q  16 caatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 65  Q
    ||||||| |||||||||||| ||||||| |||||||||||| ||||||||    
T  36548621 caatattgcacatgttaagggaactaaaagtagtaattttttattgaaaa 36548572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 47120355 - 47120306
Alignment:
Q  16 caatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 65  Q
    ||||||| ||||||||| || ||||||| |||||||||||||||||||||    
T  47120355 caatattgcacatgttatggtaactaaaagtagtaatttttcattgaaaa 47120306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 105 - 203
Target Start/End: Complemental strand, 46573563 - 46573469
Alignment:
Q  105 ggcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatcttatgcttc 203  Q
    ||||||||||||| |||||||||   | |||||||||  |  | |||||||| ||||||||||||||||||||  ||||||||||||||| || |||||    
T  46573563 ggcaaaagttatgatgcataaggt--ttcttatgcaccgtatataaacacttcacaaccatcagatctagtgt--acacgtgtaataatcctaggcttc 46573469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 147
Target Start/End: Complemental strand, 763869 - 763834
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcactatgca 147  Q
    ||||||||||||||||||||||||||||||| ||||    
T  763869 gttatggtgcataaggaaatccttatgcactgtgca 763834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 147
Target Start/End: Original strand, 6620621 - 6620656
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcactatgca 147  Q
    |||||||||||||| |||||||||||||||||||||    
T  6620621 gttatggtgcataacgaaatccttatgcactatgca 6620656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 147
Target Start/End: Original strand, 15973862 - 15973897
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcactatgca 147  Q
    |||||||||||||||||||||||||||||| |||||    
T  15973862 gttatggtgcataaggaaatccttatgcaccatgca 15973897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 147
Target Start/End: Original strand, 46572576 - 46572611
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcactatgca 147  Q
    |||||||||||||||||||||||||||||| |||||    
T  46572576 gttatggtgcataaggaaatccttatgcaccatgca 46572611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 16 - 66
Target Start/End: Original strand, 19868130 - 19868180
Alignment:
Q  16 caatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaaa 66  Q
    ||||||| |||||||||||  ||||||| ||||||| ||||||||||||||    
T  19868130 caatattgcacatgttaagacaactaaaagtagtaaattttcattgaaaaa 19868180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 3562039 - 3561990
Alignment:
Q  16 caatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 65  Q
    ||||||| |||||||||||| ||||||| | ||||| |||||||||||||    
T  3562039 caatattgcacatgttaaggtaactaaaagcagtaacttttcattgaaaa 3561990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 5909443 - 5909394
Alignment:
Q  16 caatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 65  Q
    ||||||| |||||||||||| ||||||| | ||||| |||||||||||||    
T  5909443 caatattgcacatgttaaggcaactaaaagcagtaacttttcattgaaaa 5909394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Original strand, 11732044 - 11732073
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  11732044 gttatggtgcataaggaaatccttatgcac 11732073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Original strand, 16933137 - 16933166
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  16933137 gttatggtgcataaggaaatccttatgcac 16933166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Original strand, 16938520 - 16938549
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  16938520 gttatggtgcataaggaaatccttatgcac 16938549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 23982917 - 23982868
Alignment:
Q  16 caatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 65  Q
    |||||||| ||||||||||| ||||||| ||||||| |||||||| ||||    
T  23982917 caatattatacatgttaaggcaactaaaagtagtaacttttcattcaaaa 23982868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Complemental strand, 26945756 - 26945727
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  26945756 gttatggtgcataaggaaatccttatgcac 26945727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Original strand, 30884116 - 30884145
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  30884116 gttatggtgcataaggaaatccttatgcac 30884145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Complemental strand, 31660241 - 31660212
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  31660241 gttatggtgcataaggaaatccttatgcac 31660212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Complemental strand, 33798775 - 33798746
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  33798775 gttatggtgcataaggaaatccttatgcac 33798746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Complemental strand, 35737120 - 35737091
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  35737120 gttatggtgcataaggaaatccttatgcac 35737091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Complemental strand, 38837771 - 38837742
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  38837771 gttatggtgcataaggaaatccttatgcac 38837742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 39869139 - 39869188
Alignment:
Q  16 caatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 65  Q
    ||||||| |||||||||| |||||||||  |||||| |||||||||||||    
T  39869139 caatattgcacatgttaaagaaactaaaaatagtaacttttcattgaaaa 39869188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Original strand, 41911006 - 41911035
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  41911006 gttatggtgcataaggaaatccttatgcac 41911035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Original strand, 44426600 - 44426629
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  44426600 gttatggtgcataaggaaatccttatgcac 44426629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Complemental strand, 46004577 - 46004548
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  46004577 gttatggtgcataaggaaatccttatgcac 46004548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Complemental strand, 46358692 - 46358663
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  46358692 gttatggtgcataaggaaatccttatgcac 46358663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Complemental strand, 47340319 - 47340290
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  47340319 gttatggtgcataaggaaatccttatgcac 47340290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Complemental strand, 48692092 - 48692063
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  48692092 gttatggtgcataaggaaatccttatgcac 48692063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Complemental strand, 48830641 - 48830612
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  48830641 gttatggtgcataaggaaatccttatgcac 48830612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Complemental strand, 7845139 - 7845111
Alignment:
Q  112 gttatggtgcataaggaaatccttatgca 140  Q
    |||||||||||||||||||||||||||||    
T  7845139 gttatggtgcataaggaaatccttatgca 7845111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 17 - 65
Target Start/End: Complemental strand, 12086091 - 12086043
Alignment:
Q  17 aatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 65  Q
    |||||| |||||||||||| ||||||| ||||||| ||||| |||||||    
T  12086091 aatattgcacatgttaaggcaactaaaagtagtaacttttcgttgaaaa 12086043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 17 - 65
Target Start/End: Complemental strand, 24463115 - 24463067
Alignment:
Q  17 aatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 65  Q
    |||||| |||||||||||| ||||||| |||||||||| | ||||||||    
T  24463115 aatatttcacatgttaaggcaactaaaagtagtaatttcttattgaaaa 24463067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Original strand, 31365273 - 31365301
Alignment:
Q  112 gttatggtgcataaggaaatccttatgca 140  Q
    |||||||||||||||||||||||||||||    
T  31365273 gttatggtgcataaggaaatccttatgca 31365301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 398 - 438
Target Start/End: Original strand, 33534773 - 33534813
Alignment:
Q  398 acatccttttttgtgttgattccaaatatcgccttagattt 438  Q
    ||||||||||||||||||||| || ||||| ||||||||||    
T  33534773 acatccttttttgtgttgatttcatatatcaccttagattt 33534813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Original strand, 34227678 - 34227706
Alignment:
Q  112 gttatggtgcataaggaaatccttatgca 140  Q
    |||||||||||||||||||||||||||||    
T  34227678 gttatggtgcataaggaaatccttatgca 34227706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Original strand, 43742251 - 43742279
Alignment:
Q  112 gttatggtgcataaggaaatccttatgca 140  Q
    |||||||||||||||||||||||||||||    
T  43742251 gttatggtgcataaggaaatccttatgca 43742279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 131 - 194
Target Start/End: Complemental strand, 44141290 - 44141229
Alignment:
Q  131 tccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatc 194  Q
    |||||||||||  |||| |||||||| ||||||||| ||| ||||||  |||||||||||||||    
T  44141290 tccttatgcaccctgcataaacacttcacaaccatctgatttagtgt--acacgtgtaataatc 44141229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 111 - 147
Target Start/End: Original strand, 46004342 - 46004378
Alignment:
Q  111 agttatggtgcataaggaaatccttatgcactatgca 147  Q
    ||||||||||||||| |||||||||||||||| ||||    
T  46004342 agttatggtgcataacgaaatccttatgcactctgca 46004378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 134; Significance: 2e-69; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 272 - 441
Target Start/End: Original strand, 34329286 - 34329455
Alignment:
Q  272 ctacaattcagatgagtcttcatctcttccggccacacatgatgattccggcacggcggccgccggtggcaccaccgcgccggatttcaatactccatcc 371  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| ||||| ||||| |||    
T  34329286 ctacaattcagatgggtcttcatctcttccggccacacatgatgatttcggcacggcggccgccggtggtaccaccgcgccggagttcaaaactccgtcc 34329385  T
Q  372 aaatcaaaaagttttcacggttttagacatccttttttgtgttgattccaaatatcgccttagatttctc 441  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| ||||||||||||    
T  34329386 aaatcaaaaagttttcacggtttcaaacatccttttttgtgttgattccaaatatcgtcttagatttctc 34329455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 272 - 441
Target Start/End: Complemental strand, 2826963 - 2826791
Alignment:
Q  272 ctacaattcagatgagtcttcatctcttccggc---cacacatgatgattccggcacggcggccgccggtggcaccaccgcgccggatttcaatactcca 368  Q
    |||||||||| ||||||||||||||||||||||   || |||||||||||||| | | | |||||  |||||||||||||||||||| ||||| |||||     
T  2826963 ctacaattcaaatgagtcttcatctcttccggcggccatacatgatgattccgacgcagtggccggtggtggcaccaccgcgccggagttcaaaactccg 2826864  T
Q  369 tccaaatcaaaaagttttcacggttttagacatccttttttgtgttgattccaaatatcgccttagatttctc 441  Q
    |||||||||||||    | ||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  2826863 tccaaatcaaaaaaaaattacggttttagacatccttttttgtgttgatttcaaatatcgccttagatttctc 2826791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 107 - 193
Target Start/End: Complemental strand, 25017280 - 25017196
Alignment:
Q  107 caaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataat 193  Q
    |||||||||||||||||||||||||||||||||||  |||| |||||||| ||||||||||||||||||||  ||||||||||||||    
T  25017280 caaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaaccatcagatctagtgt--acacgtgtaataat 25017196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 105 - 194
Target Start/End: Complemental strand, 28070218 - 28070131
Alignment:
Q  105 ggcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatc 194  Q
    |||||||||||||||||||||||||||||||||||||  |||| |||||||| ||||| ||||||||||||||  |||||||||||||||    
T  28070218 ggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaactatcagatctagtgt--acacgtgtaataatc 28070131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 107 - 203
Target Start/End: Original strand, 13362772 - 13362866
Alignment:
Q  107 caaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatcttatgcttc 203  Q
    |||||||||||||||||||||||||||||||||||  |||| |||||||| ||||||||||||||||||||  | ||||||||||||| || |||||    
T  13362772 caaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaaccatcagatctagtgt--atacgtgtaataatcataggcttc 13362866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 104 - 203
Target Start/End: Complemental strand, 23335773 - 23335676
Alignment:
Q  104 tggcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatcttatgcttc 203  Q
    |||||||||||||||||||||||||||||| |||||||  |||| ||||| || ||||||||||||||||||||  ||||||||||||||| || |||||    
T  23335773 tggcaaaagttatggtgcataaggaaatccgtatgcaccgtgcataaacatttcacaaccatcagatctagtgt--acacgtgtaataatcataggcttc 23335676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 105 - 181
Target Start/End: Original strand, 34329127 - 34329203
Alignment:
Q  105 ggcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtacac 181  Q
    |||||||||||||||||||||||||||| ||||||||  |||| |||||||| ||||||||||||||||||||||||    
T  34329127 ggcaaaagttatggtgcataaggaaatctttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacac 34329203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 272 - 321
Target Start/End: Complemental strand, 28070057 - 28070008
Alignment:
Q  272 ctacaattcagatgagtcttcatctcttccggccacacatgatgattccg 321  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28070057 ctacaattcagatgagtcttcatctcttccggccacacatgatgattccg 28070008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 279 - 337
Target Start/End: Complemental strand, 23335560 - 23335502
Alignment:
Q  279 tcagatgagtcttcatctcttccggccacacatgatgattccggcacggcggccgccgg 337  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| ||| || ||||||    
T  23335560 tcagatgagtcttcatctcttccagccacacatgatgattccggcgcggtggtcgccgg 23335502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 5958285 - 5958236
Alignment:
Q  16 caatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 65  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  5958285 caatattacacatgttaaagaaactaaaagtagtaatttttcattgaaaa 5958236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 13516086 - 13516022
Alignment:
Q  17 aatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaaatatcgattattatta 81  Q
    |||||| ||||||||||||||||||||||||| || ||| ||||| |||||||| ||||||||||    
T  13516086 aatattgcacatgttaaggaaactaaatgtagcaactttgcattggaaaatatcaattattatta 13516022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 131 - 203
Target Start/End: Complemental strand, 16668833 - 16668763
Alignment:
Q  131 tccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatcttatgcttc 203  Q
    |||||||||||  |||| |||||||| ||||||||||||||||||||  ||||||||||||||| || |||||    
T  16668833 tccttatgcaccctgcataaacacttcacaaccatcagatctagtgt--acacgtgtaataatcctaggcttc 16668763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 32020146 - 32020081
Alignment:
Q  16 caatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaaatatcgattattatta 81  Q
    ||||||| ||| ||||||||||||||||| |||||| ||||| |||||||| | ||||||||||||    
T  32020146 caatattgcacttgttaaggaaactaaatctagtaacttttctttgaaaaacaccgattattatta 32020081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 144 - 203
Target Start/End: Complemental strand, 2827093 - 2827036
Alignment:
Q  144 tgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatcttatgcttc 203  Q
    |||| |||||||||||||||||||||||||||||  ||||||||||| |||||| |||||    
T  2827093 tgcataaacactttacaaccatcagatctagtgt--acacgtgtaattatcttaggcttc 2827036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 279 - 319
Target Start/End: Complemental strand, 25017090 - 25017050
Alignment:
Q  279 tcagatgagtcttcatctcttccggccacacatgatgattc 319  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  25017090 tcagatgagtcttcatctcttccggcaacacatgatgattc 25017050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 144 - 197
Target Start/End: Complemental strand, 18465582 - 18465531
Alignment:
Q  144 tgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatctta 197  Q
    |||| |||||||| ||||||||||||||||||||  ||||||||||||||||||    
T  18465582 tgcataaacacttcacaaccatcagatctagtgt--acacgtgtaataatctta 18465531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 111 - 145
Target Start/End: Complemental strand, 39086749 - 39086715
Alignment:
Q  111 agttatggtgcataaggaaatccttatgcactatg 145  Q
    |||||||||||||||||||||||||||||||||||    
T  39086749 agttatggtgcataaggaaatccttatgcactatg 39086715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 2795540 - 2795589
Alignment:
Q  16 caatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 65  Q
    ||||||| |||||||||||| ||||||| ||||||| |||||||||||||    
T  2795540 caatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaa 2795589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 11636748 - 11636797
Alignment:
Q  16 caatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 65  Q
    ||||||| |||||||||| ||||||||| ||||||| |||||||||||||    
T  11636748 caatattgcacatgttaaagaaactaaaagtagtaacttttcattgaaaa 11636797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 12642154 - 12642105
Alignment:
Q  16 caatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 65  Q
    |||||||  ||||||||||| ||||||| |||||||||||||||||||||    
T  12642154 caatattgtacatgttaaggcaactaaaagtagtaatttttcattgaaaa 12642105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 34578028 - 34578077
Alignment:
Q  16 caatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 65  Q
    ||||||| |||||||||||| ||||||| ||| |||||||||||||||||    
T  34578028 caatattccacatgttaaggtaactaaaagtaataatttttcattgaaaa 34578077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 65
Target Start/End: Original strand, 9184225 - 9184273
Alignment:
Q  17 aatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 65  Q
    |||||| |||||||||||| ||||||| ||||||| |||||||||||||    
T  9184225 aatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaa 9184273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 283 - 323
Target Start/End: Original strand, 13362991 - 13363030
Alignment:
Q  283 atgagtcttcatctcttccggccacacatgatgattccggc 323  Q
    ||||||||| |||||||||||||||||||||||||||||||    
T  13362991 atgagtctt-atctcttccggccacacatgatgattccggc 13363030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 105 - 177
Target Start/End: Original strand, 42512200 - 42512271
Alignment:
Q  105 ggcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgt 177  Q
    |||||||||||||||  | || ||||||||||| |||  |||| |||||||| ||||||||||||||||||||    
T  42512200 ggcaaaagttatggtt-agaaagaaatccttatccaccgtgcataaacacttcacaaccatcagatctagtgt 42512271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 100 - 170
Target Start/End: Original strand, 13552978 - 13553049
Alignment:
Q  100 ctgttggcaaaagttatggtgcataag-gaaatccttatgcactatgcagaaacactttacaaccatcagat 170  Q
    |||||||||||||||||||||||||||  |  |||||||||||  |||| |||||| | |||||||||||||    
T  13552978 ctgttggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagat 13553049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 147
Target Start/End: Original strand, 15559051 - 15559086
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcactatgca 147  Q
    |||||||||||||||||||||||||||||| |||||    
T  15559051 gttatggtgcataaggaaatccttatgcaccatgca 15559086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 147
Target Start/End: Complemental strand, 20134441 - 20134406
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcactatgca 147  Q
    ||||||||||||||||||||||||||||||| ||||    
T  20134441 gttatggtgcataaggaaatccttatgcactctgca 20134406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 147
Target Start/End: Complemental strand, 37456852 - 37456817
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcactatgca 147  Q
    |||||||||||||||||||||||||||||| |||||    
T  37456852 gttatggtgcataaggaaatccttatgcaccatgca 37456817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 111 - 141
Target Start/End: Complemental strand, 22830831 - 22830801
Alignment:
Q  111 agttatggtgcataaggaaatccttatgcac 141  Q
    |||||||||||||||||||||||||||||||    
T  22830831 agttatggtgcataaggaaatccttatgcac 22830801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 111 - 140
Target Start/End: Original strand, 703731 - 703760
Alignment:
Q  111 agttatggtgcataaggaaatccttatgca 140  Q
    ||||||||||||||||||||||||||||||    
T  703731 agttatggtgcataaggaaatccttatgca 703760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Original strand, 3340592 - 3340621
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  3340592 gttatggtgcataaggaaatccttatgcac 3340621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 145
Target Start/End: Complemental strand, 3340821 - 3340788
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcactatg 145  Q
    |||||||||| |||||||||||||||||||||||    
T  3340821 gttatggtgcgtaaggaaatccttatgcactatg 3340788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Original strand, 3883929 - 3883958
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  3883929 gttatggtgcataaggaaatccttatgcac 3883958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 4047429 - 4047478
Alignment:
Q  16 caatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 65  Q
    ||||||| || ||||||||| ||||||| ||||||| |||||||||||||    
T  4047429 caatattgcatatgttaaggtaactaaaagtagtaacttttcattgaaaa 4047478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 11375976 - 11376025
Alignment:
Q  16 caatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 65  Q
    ||||||| |||||||||| | ||||||| ||||||| |||||||||||||    
T  11375976 caatattgcacatgttaaagcaactaaaagtagtaacttttcattgaaaa 11376025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Original strand, 11660795 - 11660824
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  11660795 gttatggtgcataaggaaatccttatgcac 11660824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Complemental strand, 11661024 - 11660995
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  11661024 gttatggtgcataaggaaatccttatgcac 11660995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Complemental strand, 13553155 - 13553126
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  13553155 gttatggtgcataaggaaatccttatgcac 13553126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Complemental strand, 14394640 - 14394611
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  14394640 gttatggtgcataaggaaatccttatgcac 14394611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Original strand, 14940250 - 14940279
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  14940250 gttatggtgcataaggaaatccttatgcac 14940279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 15190889 - 15190938
Alignment:
Q  16 caatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 65  Q
    ||||||| || ||||||||| || |||| |||||||||||||||||||||    
T  15190889 caatattgcatatgttaaggtaagtaaaagtagtaatttttcattgaaaa 15190938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Complemental strand, 22695582 - 22695553
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  22695582 gttatggtgcataaggaaatccttatgcac 22695553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Original strand, 23155527 - 23155556
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  23155527 gttatggtgcataaggaaatccttatgcac 23155556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Complemental strand, 25545614 - 25545585
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  25545614 gttatggtgcataaggaaatccttatgcac 25545585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Original strand, 26637731 - 26637760
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  26637731 gttatggtgcataaggaaatccttatgcac 26637760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Original strand, 35662069 - 35662098
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  35662069 gttatggtgcataaggaaatccttatgcac 35662098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Complemental strand, 39861822 - 39861793
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  39861822 gttatggtgcataaggaaatccttatgcac 39861793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 17 - 65
Target Start/End: Complemental strand, 10665125 - 10665077
Alignment:
Q  17 aatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 65  Q
    |||||| |||||||||||| ||||||| ||| ||| |||||||||||||    
T  10665125 aatattgcacatgttaaggtaactaaaagtaataacttttcattgaaaa 10665077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Original strand, 20134201 - 20134229
Alignment:
Q  112 gttatggtgcataaggaaatccttatgca 140  Q
    |||||||||||||||||||||||||||||    
T  20134201 gttatggtgcataaggaaatccttatgca 20134229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Complemental strand, 22672039 - 22672011
Alignment:
Q  112 gttatggtgcataaggaaatccttatgca 140  Q
    |||||||||||||||||||||||||||||    
T  22672039 gttatggtgcataaggaaatccttatgca 22672011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 128; Significance: 6e-66; HSPs: 72)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 273 - 440
Target Start/End: Complemental strand, 26447305 - 26447138
Alignment:
Q  273 tacaattcagatgagtcttcatctcttccggccacacatgatgattccggcacggcggccgccggtggcaccaccgcgccggatttcaatactccatcca 372  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| || ||| |||||  ||||||||||||| |||||| ||||| ||||| ||||    
T  26447305 tacaattcagatgagtcctcatctcttccggccacacatgatgattccagcgcggtggccgatggtggcaccaccgtgccggagttcaaaactccgtcca 26447206  T
Q  373 aatcaaaaagttttcacggttttagacatccttttttgtgttgattccaaatatcgccttagatttct 440  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26447205 aatcaaaaagttttcacggttttagacatccttttttgtgttgattccaaatatcgccttagatttct 26447138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 272 - 440
Target Start/End: Original strand, 638023 - 638190
Alignment:
Q  272 ctacaattcagatgagtcttcatctcttccggccacacatgatgattccggcacggcggccgccggtggcaccaccgcgccggatttcaatactccatcc 371  Q
    |||||||| |||||||||||||||||||||||||||||| |||||||||| ||||| |||||  |||||||||||||||||||| ||||| ||||| |||    
T  638023 ctacaatttagatgagtcttcatctcttccggccacacacgatgattccgacacggtggccggtggtggcaccaccgcgccggagttcaaaactccgtcc 638122  T
Q  372 aaatcaaaaagttttcacggttttagacatccttttttgtgttgattccaaatatcgccttagatttct 440  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  638123 aaatcaaaaagttttcacggttttagacatcc-tttttgtgttgattccaaatatcgccttagatttct 638190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 103 - 203
Target Start/End: Original strand, 27764238 - 27764336
Alignment:
Q  103 ttggcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatcttatgctt 202  Q
    |||||||||||||||||||||||||||||||||||||||  |||| ||||||||  |||||||||||||||||||  ||||||||||||||| || ||||    
T  27764238 ttggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcgcaaccatcagatctagtgt--acacgtgtaataatcctacgctt 27764335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 109 - 203
Target Start/End: Complemental strand, 36621762 - 36621670
Alignment:
Q  109 aaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatcttatgcttc 203  Q
    |||||||||||||||||||||||||||||||||  |||| |||||||| |||||||||||||||| |||  ||||||||||||||| ||||||||    
T  36621762 aaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaaccatcagatctaatgt--acacgtgtaataatcctatgcttc 36621670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 105 - 193
Target Start/End: Complemental strand, 26447477 - 26447391
Alignment:
Q  105 ggcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataat 193  Q
    ||||||||| |||||||||||||||||||||||||||  |||| |||||||| ||||||||||||||||||||  ||||||||||||||    
T  26447477 ggcaaaagtaatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaaccatcagatctagtgt--acacgtgtaataat 26447391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 272 - 336
Target Start/End: Complemental strand, 51836984 - 51836920
Alignment:
Q  272 ctacaattcagatgagtcttcatctcttccggccacacatgatgattccggcacggcggccgccg 336  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||    
T  51836984 ctacaattcagatgagtcttcatctcttccggccacacatgatgattccggcacggtggtcgccg 51836920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 105 - 194
Target Start/End: Original strand, 45255975 - 45256062
Alignment:
Q  105 ggcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatc 194  Q
    |||||||||||||||||||||||||||||||||||||  |||| |||||||| ||||| ||||||| ||||||  |||||||||||||||    
T  45255975 ggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaactatcagatatagtgt--acacgtgtaataatc 45256062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 108 - 194
Target Start/End: Complemental strand, 22181307 - 22181223
Alignment:
Q  108 aaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatc 194  Q
    ||||||||||||||||||||||||||||||||||  |||| ||| |||| ||||||||||||| ||||||  |||||||||||||||    
T  22181307 aaaagttatggtgcataaggaaatccttatgcaccgtgcataaaaacttcacaaccatcagatttagtgt--acacgtgtaataatc 22181223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 272 - 337
Target Start/End: Original strand, 45256148 - 45256213
Alignment:
Q  272 ctacaattcagatgagtcttcatctcttccggccacacatgatgattccggcacggcggccgccgg 337  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| || ||||||    
T  45256148 ctacaattcagatgagtcttcatctcttccggccacacaggatgattccggcgcggtggtcgccgg 45256213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 104 - 170
Target Start/End: Original strand, 50643742 - 50643808
Alignment:
Q  104 tggcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagat 170  Q
    ||||||||||||||||||||||||||||||||||||||  |||| |||||||| | |||||||||||    
T  50643742 tggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcataaccatcagat 50643808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 276 - 321
Target Start/End: Original strand, 27764451 - 27764496
Alignment:
Q  276 aattcagatgagtcttcatctcttccggccacacatgatgattccg 321  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  27764451 aattcagatgagtcttcatctcttccggccacacatgatgattccg 27764496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 279 - 323
Target Start/End: Original strand, 21097349 - 21097393
Alignment:
Q  279 tcagatgagtcttcatctcttccggccacacatgatgattccggc 323  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  21097349 tcagatgagtcttcatctcttccggccacacatgatgattccggc 21097393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 279 - 320
Target Start/End: Original strand, 4168567 - 4168608
Alignment:
Q  279 tcagatgagtcttcatctcttccggccacacatgatgattcc 320  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  4168567 tcagatgagtcttcatctcttccggccacacatgatgattcc 4168608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 105 - 193
Target Start/End: Original strand, 21097140 - 21097226
Alignment:
Q  105 ggcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataat 193  Q
    |||||||||||  ||||||||||||||||||||||||  || | |||||||| |||||||| ||||||||| |  ||||||||||||||    
T  21097140 ggcaaaagttaccgtgcataaggaaatccttatgcaccgtgtataaacacttcacaaccattagatctagttt--acacgtgtaataat 21097226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 279 - 323
Target Start/End: Original strand, 18923466 - 18923510
Alignment:
Q  279 tcagatgagtcttcatctcttccggccacacatgatgattccggc 323  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  18923466 tcagatgagtcttcatctcttccgaccacacatgatgattccggc 18923510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 107 - 170
Target Start/End: Complemental strand, 29826669 - 29826606
Alignment:
Q  107 caaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagat 170  Q
    ||||||||||||| |||||||||||||||||||||  |||| || ||||| |||||||||||||    
T  29826669 caaaagttatggtacataaggaaatccttatgcaccgtgcataagcacttcacaaccatcagat 29826606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 283 - 337
Target Start/End: Complemental strand, 38485524 - 38485470
Alignment:
Q  283 atgagtcttcatctcttccggccacacatgatgattccggcacggcggccgccgg 337  Q
    ||||||||||||||||||||||||||||| || |||||||||||| || ||||||    
T  38485524 atgagtcttcatctcttccggccacacataataattccggcacggtggtcgccgg 38485470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 101 - 203
Target Start/End: Complemental strand, 38485739 - 38485643
Alignment:
Q  101 tgttggcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatcttatgc 200  Q
    ||||| |||||||||||||||||||||||    ||||||||  |||| |||| ||| |||||||||||||||| |||  ||||||||||||||| || ||    
T  38485739 tgttgtcaaaagttatggtgcataaggaa----ttatgcaccgtgcataaacgcttcacaaccatcagatctaatgt--acacgtgtaataatcctaggc 38485646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 131 - 194
Target Start/End: Original strand, 4168384 - 4168445
Alignment:
Q  131 tccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatc 194  Q
    |||||||||||  |||| |||||||| |||||||||||||||||||||||||  ||||||||||    
T  4168384 tccttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacaca--tgtaataatc 4168445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 283 - 337
Target Start/End: Complemental strand, 22181098 - 22181044
Alignment:
Q  283 atgagtcttcatctcttccggccacacatgatgattccggcacggcggccgccgg 337  Q
    |||||| |||||||||||||||||||||||||||||| ||| ||| || ||||||    
T  22181098 atgagttttcatctcttccggccacacatgatgattctggcgcggtggtcgccgg 22181044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 16 - 81
Target Start/End: Original strand, 27756578 - 27756643
Alignment:
Q  16 caatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaaatatcgattattatta 81  Q
    ||||||| ||||||||||||||||||||||||| || ||| ||||| |||| | | ||||||||||    
T  27756578 caatattgcacatgttaaggaaactaaatgtagcaactttgcattggaaaacaccaattattatta 27756643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 29190977 - 29190928
Alignment:
Q  16 caatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 65  Q
    ||||||| || ||||||||| ||||||| |||||||||||||||||||||    
T  29190977 caatattgcatatgttaaggtaactaaaagtagtaatttttcattgaaaa 29190928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 105 - 193
Target Start/End: Complemental strand, 50563794 - 50563708
Alignment:
Q  105 ggcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataat 193  Q
    ||||||||||||  ||||||||  | | | |||||||  |||| |||||||| ||||||||||||||||||||  ||||||||||||||    
T  50563794 ggcaaaagttattatgcataagatatttcatatgcaccctgcataaacacttcacaaccatcagatctagtgt--acacgtgtaataat 50563708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 9327031 - 9326979
Alignment:
Q  16 caatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaaata 68  Q
    ||||||| || ||||||| |||||||| |||||||| ||||||||||||||||    
T  9327031 caatattgcatatgttaaagaaactaattgtagtaacttttcattgaaaaata 9326979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 9373753 - 9373701
Alignment:
Q  16 caatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaaata 68  Q
    ||||||| || ||||||| |||||||| |||||||| ||||||||||||||||    
T  9373753 caatattgcatatgttaaagaaactaattgtagtaacttttcattgaaaaata 9373701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 9382065 - 9382013
Alignment:
Q  16 caatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaaata 68  Q
    ||||||| || ||||||| |||||||| |||||||| ||||||||||||||||    
T  9382065 caatattgcatatgttaaagaaactaattgtagtaacttttcattgaaaaata 9382013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 637883 - 637929
Alignment:
Q  134 ttatgcactatgcagaaacactttacaaccatcagatctagtgtaca 180  Q
    ||||||||  |||| |||||||| |||||||||||||||||||||||    
T  637883 ttatgcaccgtgcataaacacttcacaaccatcagatctagtgtaca 637929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 108 - 181
Target Start/End: Complemental strand, 1729678 - 1729604
Alignment:
Q  108 aaaagttatggtgcataaggaaatcctt-atgcactatgcagaaacactttacaaccatcagatctagtgtacac 181  Q
    |||||||||||||||||||  | | ||| || |||  |||| |||||||| ||||||||||||||||||||||||    
T  1729678 aaaagttatggtgcataagtcatttctttatacaccgtgcataaacacttcacaaccatcagatctagtgtacac 1729604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 111 - 141
Target Start/End: Complemental strand, 8157332 - 8157302
Alignment:
Q  111 agttatggtgcataaggaaatccttatgcac 141  Q
    |||||||||||||||||||||||||||||||    
T  8157332 agttatggtgcataaggaaatccttatgcac 8157302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 111 - 141
Target Start/End: Original strand, 49492405 - 49492435
Alignment:
Q  111 agttatggtgcataaggaaatccttatgcac 141  Q
    |||||||||||||||||||||||||||||||    
T  49492405 agttatggtgcataaggaaatccttatgcac 49492435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 105 - 170
Target Start/End: Original strand, 55765481 - 55765547
Alignment:
Q  105 ggcaaaagttatggtgcataaggaaat-ccttatgcactatgcagaaacactttacaaccatcagat 170  Q
    ||||||||||||||||||||||  | | ||||||||||  |||| |||||| |||||||||||||||    
T  55765481 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacattacaaccatcagat 55765547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Original strand, 1492674 - 1492703
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  1492674 gttatggtgcataaggaaatccttatgcac 1492703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Original strand, 2124346 - 2124375
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  2124346 gttatggtgcataaggaaatccttatgcac 2124375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Original strand, 6841823 - 6841852
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  6841823 gttatggtgcataaggaaatccttatgcac 6841852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 7349705 - 7349754
Alignment:
Q  16 caatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 65  Q
    ||||||| |||||||||||| ||||||| ||| ||| |||||||||||||    
T  7349705 caatattgcacatgttaaggcaactaaaagtaataacttttcattgaaaa 7349754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Original strand, 8165764 - 8165793
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  8165764 gttatggtgcataaggaaatccttatgcac 8165793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Complemental strand, 10473690 - 10473661
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  10473690 gttatggtgcataaggaaatccttatgcac 10473661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Complemental strand, 11786146 - 11786117
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  11786146 gttatggtgcataaggaaatccttatgcac 11786117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Complemental strand, 11798313 - 11798284
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  11798313 gttatggtgcataaggaaatccttatgcac 11798284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Original strand, 12722739 - 12722768
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  12722739 gttatggtgcataaggaaatccttatgcac 12722768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Original strand, 13635619 - 13635648
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  13635619 gttatggtgcataaggaaatccttatgcac 13635648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Original strand, 15051030 - 15051059
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  15051030 gttatggtgcataaggaaatccttatgcac 15051059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Complemental strand, 17109960 - 17109931
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  17109960 gttatggtgcataaggaaatccttatgcac 17109931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Original strand, 21995672 - 21995701
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  21995672 gttatggtgcataaggaaatccttatgcac 21995701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Original strand, 22180208 - 22180237
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  22180208 gttatggtgcataaggaaatccttatgcac 22180237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Original strand, 25715645 - 25715674
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  25715645 gttatggtgcataaggaaatccttatgcac 25715674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Original strand, 26577263 - 26577292
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  26577263 gttatggtgcataaggaaatccttatgcac 26577292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Complemental strand, 30358879 - 30358850
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  30358879 gttatggtgcataaggaaatccttatgcac 30358850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Complemental strand, 30597871 - 30597842
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  30597871 gttatggtgcataaggaaatccttatgcac 30597842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Original strand, 30779345 - 30779374
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  30779345 gttatggtgcataaggaaatccttatgcac 30779374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Complemental strand, 31763150 - 31763121
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  31763150 gttatggtgcataaggaaatccttatgcac 31763121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Original strand, 33819693 - 33819722
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  33819693 gttatggtgcataaggaaatccttatgcac 33819722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Original strand, 33883296 - 33883325
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  33883296 gttatggtgcataaggaaatccttatgcac 33883325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 65
Target Start/End: Original strand, 35911143 - 35911180
Alignment:
Q  28 tgttaaggaaactaaatgtagtaatttttcattgaaaa 65  Q
    |||||||||||||||| ||||||||||| |||||||||    
T  35911143 tgttaaggaaactaaaagtagtaattttgcattgaaaa 35911180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Original strand, 36924243 - 36924272
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  36924243 gttatggtgcataaggaaatccttatgcac 36924272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Original strand, 37059713 - 37059742
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  37059713 gttatggtgcataaggaaatccttatgcac 37059742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Complemental strand, 45256937 - 45256908
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  45256937 gttatggtgcataaggaaatccttatgcac 45256908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 49228373 - 49228422
Alignment:
Q  16 caatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 65  Q
    ||||||| || ||||||||| ||||||| ||||||| |||||||||||||    
T  49228373 caatattgcatatgttaaggtaactaaaagtagtaacttttcattgaaaa 49228422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 49332349 - 49332402
Alignment:
Q  16 caatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaaatat 69  Q
    ||||||| |||||||||||| || |||| ||| ||| |||||||||||||||||    
T  49332349 caatatttcacatgttaaggtaattaaaagtaataacttttcattgaaaaatat 49332402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Original strand, 49425951 - 49425980
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  49425951 gttatggtgcataaggaaatccttatgcac 49425980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Complemental strand, 50644712 - 50644683
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  50644712 gttatggtgcataaggaaatccttatgcac 50644683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Complemental strand, 53441492 - 53441463
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  53441492 gttatggtgcataaggaaatccttatgcac 53441463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Complemental strand, 53865285 - 53865256
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  53865285 gttatggtgcataaggaaatccttatgcac 53865256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Complemental strand, 54895625 - 54895596
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  54895625 gttatggtgcataaggaaatccttatgcac 54895596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 113 - 141
Target Start/End: Complemental strand, 639035 - 639007
Alignment:
Q  113 ttatggtgcataaggaaatccttatgcac 141  Q
    |||||||||||||||||||||||||||||    
T  639035 ttatggtgcataaggaaatccttatgcac 639007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 64
Target Start/End: Complemental strand, 10658605 - 10658557
Alignment:
Q  16 caatattacacatgttaaggaaactaaatgtagtaatttttcattgaaa 64  Q
    |||||||||||||||||||| ||||||| |||| || |||| |||||||    
T  10658605 caatattacacatgttaaggtaactaaaagtagcaagtttttattgaaa 10658557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 64
Target Start/End: Complemental strand, 10872750 - 10872702
Alignment:
Q  16 caatattacacatgttaaggaaactaaatgtagtaatttttcattgaaa 64  Q
    |||||||||||||||||||| ||||||| |||| || |||| |||||||    
T  10872750 caatattacacatgttaaggtaactaaaagtagcaagtttttattgaaa 10872702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 103 - 170
Target Start/End: Original strand, 30597697 - 30597765
Alignment:
Q  103 ttggcaaaagttatggtgcataag-gaaatccttatgcactatgcagaaacactttacaaccatcagat 170  Q
    ||||||||||||||||||||||||  |  |||||||||||  |||| |||||| | |||||||||||||    
T  30597697 ttggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagat 30597765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Original strand, 31762931 - 31762959
Alignment:
Q  112 gttatggtgcataaggaaatccttatgca 140  Q
    |||||||||||||||||||||||||||||    
T  31762931 gttatggtgcataaggaaatccttatgca 31762959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 113 - 141
Target Start/End: Original strand, 36309419 - 36309447
Alignment:
Q  113 ttatggtgcataaggaaatccttatgcac 141  Q
    |||||||||||||||||||||||||||||    
T  36309419 ttatggtgcataaggaaatccttatgcac 36309447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 64
Target Start/End: Original strand, 39876847 - 39876895
Alignment:
Q  16 caatattacacatgttaaggaaactaaatgtagtaatttttcattgaaa 64  Q
    ||||||| |||||||||||| ||||||| ||||||| |||| |||||||    
T  39876847 caatattgcacatgttaaggtaactaaaagtagtaagtttttattgaaa 39876895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 105 - 141
Target Start/End: Complemental strand, 48077910 - 48077874
Alignment:
Q  105 ggcaaaagttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||  |||||||||||||||||||||||    
T  48077910 ggcaaaagttatcatgcataaggaaatccttatgcac 48077874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 126; Significance: 1e-64; HSPs: 58)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 272 - 441
Target Start/End: Original strand, 179779 - 179948
Alignment:
Q  272 ctacaattcagatgagtcttcatctcttccggccacacatgatgattccggcacggcggccgccggtggcaccaccgcgccggatttcaatactccatcc 371  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| |||| ||  |||||  |||||||||||||||||||| ||||| |||||||||    
T  179779 ctacaattcagatgagtcttcatctctttcggccacacatgatgatttcggcgcgatggccggtggtggcaccaccgcgccggagttcaaaactccatcc 179878  T
Q  372 aaatcaaaaagttttcacggttttagacatccttttttgtgttgattccaaatatcgccttagatttctc 441  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  179879 aaatcaaaaagttttcacggttttagacatccttttttgtgttgatttcaaatatcgtcttagatttctc 179948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 272 - 440
Target Start/End: Complemental strand, 8402203 - 8402035
Alignment:
Q  272 ctacaattcagatgagtcttcatctcttccggccacacatgatgattccggcacggcggccgccggtggcaccaccgcgccggatttcaatactccatcc 371  Q
    ||||||||||||||||||||||||| ||||||||| |||||||||||||||| ||| |||||  |||||||||||| | ||||| ||||| ||| |||||    
T  8402203 ctacaattcagatgagtcttcatcttttccggccaaacatgatgattccggcgcggtggccggtggtggcaccaccacaccggagttcaaaacttcatcc 8402104  T
Q  372 aaatcaaaaagttttcacggttttagacatccttttttgtgttgattccaaatatcgccttagatttct 440  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  8402103 aaatcaaaaagttttcacggttttaggcatccttttttgtgttgattccaaatattgccttagatttct 8402035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 272 - 440
Target Start/End: Original strand, 22348210 - 22348376
Alignment:
Q  272 ctacaattcagatgagtcttcatctcttccggccacacatgatgattccggcacggcggccgccggtggcaccaccgcgccggatttcaatactccatcc 371  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||  | ||| |||||  ||||||||||| ||| |||| ||||| ||||| |||    
T  22348210 ctacaattcatatgagtcttcatctcttccggccacacatgatgattccaccgcggtggccggtggtggcaccactgcgtcggagttcaaaactccgtcc 22348309  T
Q  372 aaatcaaaaagttttcacggttttagacatccttttttgtgttgattccaaatatcgccttagatttct 440  Q
    ||||||||| |||||||||||||||||||||   ||||||||  |||||||||||||||||||||||||    
T  22348310 aaatcaaaatgttttcacggttttagacatc--attttgtgtcaattccaaatatcgccttagatttct 22348376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 105 - 203
Target Start/End: Original strand, 18056784 - 18056880
Alignment:
Q  105 ggcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatcttatgcttc 203  Q
    |||||||||||||||||||||||||||||||||||||  |||| |||||||| ||||||||||||||||||||  ||||||||||||||| || |||||    
T  18056784 ggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaaccatcagatctagtgt--acacgtgtaataatcctaggcttc 18056880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 105 - 203
Target Start/End: Original strand, 22348039 - 22348135
Alignment:
Q  105 ggcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatcttatgcttc 203  Q
    |||||||||||||||||||||||||||||||||||||   ||| |||||||| |||||||||| |||||||||  ||||||||||||||| || |||||    
T  22348039 ggcaaaagttatggtgcataaggaaatccttatgcaccgcgcataaacacttcacaaccatcatatctagtgt--acacgtgtaataatcctaggcttc 22348135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 105 - 203
Target Start/End: Original strand, 45889596 - 45889692
Alignment:
Q  105 ggcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatcttatgcttc 203  Q
    |||||||| |||||||||||||||||| ||||| |||  |||| ||||| |||||||||||||||||||  ||| ||| |||||||||||||| |||||    
T  45889596 ggcaaaaggtatggtgcataaggaaattcttatccaccgtgcataaacattttacaaccatcagatcta--gtatacatgtgtaataatcttaggcttc 45889692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 105 - 194
Target Start/End: Original strand, 16115851 - 16115938
Alignment:
Q  105 ggcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatc 194  Q
    ||||||||||||  |||||||||||||||||||||||  |||| |||||||| |||||||||| ||||| |||  |||||||||||||||    
T  16115851 ggcaaaagttatcatgcataaggaaatccttatgcaccgtgcataaacacttcacaaccatcaaatctaatgt--acacgtgtaataatc 16115938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 279 - 337
Target Start/End: Complemental strand, 23319941 - 23319883
Alignment:
Q  279 tcagatgagtcttcatctcttccggccacacatgatgattccggcacggcggccgccgg 337  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||| || ||||||    
T  23319941 tcagatgagtcttcatctcttccggccacacatgatgattccggcgcggtggtcgccgg 23319883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 105 - 194
Target Start/End: Complemental strand, 23320158 - 23320063
Alignment:
Q  105 ggcaaaagttatggtgcataaggaaatccttatgcact--------atgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatc 194  Q
    ||||||||||||||||||||||||||||||||||| ||        ||||| |||||||| ||||||||||||||||||||  |||||||||||||||    
T  23320158 ggcaaaagttatggtgcataaggaaatccttatgctcttaggtatcatgcataaacacttcacaaccatcagatctagtgt--acacgtgtaataatc 23320063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 279 - 337
Target Start/End: Original strand, 45889805 - 45889863
Alignment:
Q  279 tcagatgagtcttcatctcttccggccacacatgatgattccggcacggcggccgccgg 337  Q
    |||||||||||||||||||||||||||||| ||||||||| |||| ||| || ||||||    
T  45889805 tcagatgagtcttcatctcttccggccacaaatgatgatttcggcgcggtggtcgccgg 45889863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 279 - 320
Target Start/End: Original strand, 18056991 - 18057032
Alignment:
Q  279 tcagatgagtcttcatctcttccggccacacatgatgattcc 320  Q
    ||||||||||||| ||||||||||||||||||||||||||||    
T  18056991 tcagatgagtctttatctcttccggccacacatgatgattcc 18057032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 131 - 193
Target Start/End: Original strand, 37639368 - 37639428
Alignment:
Q  131 tccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataat 193  Q
    |||||||||||  |||| |||||||| ||||||||||||||||||||  ||||||||||||||    
T  37639368 tccttatgcaccctgcataaacacttcacaaccatcagatctagtgt--acacgtgtaataat 37639428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 313766 - 313815
Alignment:
Q  16 caatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 65  Q
    ||||||| |||||||||||| ||||||| |||||||||||| ||||||||    
T  313766 caatattgcacatgttaaggtaactaaaagtagtaatttttgattgaaaa 313815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 105 - 170
Target Start/End: Complemental strand, 23921963 - 23921898
Alignment:
Q  105 ggcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagat 170  Q
    |||||||||||| |||||||||||||||||||||||   |||| || ||||| | |||||||||||    
T  23921963 ggcaaaagttattgtgcataaggaaatccttatgcatcgtgcataagcacttcataaccatcagat 23921898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 16 - 81
Target Start/End: Original strand, 38539103 - 38539168
Alignment:
Q  16 caatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaaatatcgattattatta 81  Q
    ||||||| ||||||||||||||||||||||||| || ||| ||||| |||| | | ||||||||||    
T  38539103 caatattgcacatgttaaggaaactaaatgtagcaactttgcattggaaaacaccaattattatta 38539168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 16 - 81
Target Start/End: Original strand, 38561321 - 38561386
Alignment:
Q  16 caatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaaatatcgattattatta 81  Q
    ||||||| ||||||||||||||||||||||||| || ||| ||||| |||| | | ||||||||||    
T  38561321 caatattgcacatgttaaggaaactaaatgtagcaactttgcattggaaaacaccaattattatta 38561386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 39150488 - 39150439
Alignment:
Q  16 caatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 65  Q
    ||||||| |||||||||||| ||||||| ||||||| |||||||||||||    
T  39150488 caatattgcacatgttaaggcaactaaaagtagtaacttttcattgaaaa 39150439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 51382388 - 51382437
Alignment:
Q  16 caatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 65  Q
    ||||||| |||||||||||| ||||||| ||||||| |||||||||||||    
T  51382388 caatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaa 51382437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 131 - 194
Target Start/End: Complemental strand, 35198220 - 35198159
Alignment:
Q  131 tccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatc 194  Q
    |||||||||||  |||| |||||||| ||| ||||||||||||||||  |||||||||||||||    
T  35198220 tccttatgcaccctgcataaacacttcacagccatcagatctagtgt--acacgtgtaataatc 35198159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 144 - 194
Target Start/End: Original strand, 179647 - 179695
Alignment:
Q  144 tgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatc 194  Q
    |||| |||||||| ||||||||||||||||||||  |||||||||||||||    
T  179647 tgcataaacacttcacaaccatcagatctagtgt--acacgtgtaataatc 179695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 147
Target Start/End: Complemental strand, 1395393 - 1395358
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcactatgca 147  Q
    |||||||||||||||||||||||||||||| |||||    
T  1395393 gttatggtgcataaggaaatccttatgcaccatgca 1395358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 151
Target Start/End: Original strand, 19897654 - 19897693
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcactatgcagaaa 151  Q
    ||||||||||||||||||||||||||||||  ||||||||    
T  19897654 gttatggtgcataaggaaatccttatgcaccgtgcagaaa 19897693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 147
Target Start/End: Complemental strand, 29945458 - 29945423
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcactatgca 147  Q
    ||||||||||||||||||||||||||||||| ||||    
T  29945458 gttatggtgcataaggaaatccttatgcactctgca 29945423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 203
Target Start/End: Original strand, 30802440 - 30802492
Alignment:
Q  149 aaacactttacaaccatcagatctagtgtacacacgtgtaataatcttatgcttc 203  Q
    ||||| || ||||||||||||||||||||  |||||||||||||||||| |||||    
T  30802440 aaacatttcacaaccatcagatctagtgt--acacgtgtaataatcttaggcttc 30802492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 147
Target Start/End: Complemental strand, 32143811 - 32143776
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcactatgca 147  Q
    ||||||||||||||||||||||||||||||| ||||    
T  32143811 gttatggtgcataaggaaatccttatgcactctgca 32143776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 103 - 194
Target Start/End: Complemental strand, 8402371 - 8402289
Alignment:
Q  103 ttggcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatc 194  Q
    |||||||||||||||||| ||||||||||  |||||||        |||||||| | |||||||||||||||||||||||  ||||||||||    
T  8402371 ttggcaaaagttatggtggataaggaaatttttatgcat-------aaacacttcataaccatcagatctagtgtacaca--tgtaataatc 8402289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 16 - 66
Target Start/End: Complemental strand, 39627733 - 39627683
Alignment:
Q  16 caatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaaa 66  Q
    ||||||||||||||||||||||||||||  ||| || |||| |||||||||    
T  39627733 caatattacacatgttaaggaaactaaaaatagcaacttttaattgaaaaa 39627683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Complemental strand, 6314288 - 6314259
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  6314288 gttatggtgcataaggaaatccttatgcac 6314259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 8062221 - 8062270
Alignment:
Q  16 caatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 65  Q
    |||||||  ||||||||||| ||||||| ||||||| |||||||||||||    
T  8062221 caatattgaacatgttaaggtaactaaaagtagtaacttttcattgaaaa 8062270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Complemental strand, 9041093 - 9041064
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  9041093 gttatggtgcataaggaaatccttatgcac 9041064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Complemental strand, 9628641 - 9628612
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  9628641 gttatggtgcataaggaaatccttatgcac 9628612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Original strand, 10974635 - 10974664
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  10974635 gttatggtgcataaggaaatccttatgcac 10974664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Original strand, 14229174 - 14229203
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  14229174 gttatggtgcataaggaaatccttatgcac 14229203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Complemental strand, 16976127 - 16976098
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  16976127 gttatggtgcataaggaaatccttatgcac 16976098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Complemental strand, 17811325 - 17811296
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  17811325 gttatggtgcataaggaaatccttatgcac 17811296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Original strand, 17893074 - 17893103
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  17893074 gttatggtgcataaggaaatccttatgcac 17893103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Complemental strand, 17893315 - 17893286
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  17893315 gttatggtgcataaggaaatccttatgcac 17893286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 17919470 - 17919519
Alignment:
Q  16 caatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 65  Q
    |||||||  ||||||||||| ||||||| ||||||| |||||||||||||    
T  17919470 caatattgtacatgttaaggcaactaaaagtagtaacttttcattgaaaa 17919519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Complemental strand, 23817482 - 23817453
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  23817482 gttatggtgcataaggaaatccttatgcac 23817453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Complemental strand, 24636098 - 24636069
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  24636098 gttatggtgcataaggaaatccttatgcac 24636069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Complemental strand, 31764015 - 31763986
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  31764015 gttatggtgcataaggaaatccttatgcac 31763986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Complemental strand, 32595325 - 32595296
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  32595325 gttatggtgcataaggaaatccttatgcac 32595296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 32716324 - 32716275
Alignment:
Q  16 caatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 65  Q
    ||||||| |||||||||||| ||||||||| ||||| ||||| |||||||    
T  32716324 caatattgcacatgttaaggtaactaaatgaagtaacttttcgttgaaaa 32716275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Original strand, 33156994 - 33157023
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  33156994 gttatggtgcataaggaaatccttatgcac 33157023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Complemental strand, 42134175 - 42134146
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  42134175 gttatggtgcataaggaaatccttatgcac 42134146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Complemental strand, 43452714 - 43452685
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  43452714 gttatggtgcataaggaaatccttatgcac 43452685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 44918041 - 44918090
Alignment:
Q  16 caatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 65  Q
    ||||||| |||||||||||| ||||||| ||||||| |||| ||||||||    
T  44918041 caatattgcacatgttaaggtaactaaaagtagtaaatttttattgaaaa 44918090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Original strand, 48762225 - 48762254
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  48762225 gttatggtgcataaggaaatccttatgcac 48762254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Original strand, 49936831 - 49936860
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  49936831 gttatggtgcataaggaaatccttatgcac 49936860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Original strand, 49992520 - 49992549
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  49992520 gttatggtgcataaggaaatccttatgcac 49992549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 104 - 167
Target Start/End: Complemental strand, 4097975 - 4097911
Alignment:
Q  104 tggcaaaagttatggtgcataag-gaaatccttatgcactatgcagaaacactttacaaccatca 167  Q
    |||||||||||||||||||||||  |  |||||||||||  |||| |||||||| ||||||||||    
T  4097975 tggcaaaagttatggtgcataagctatttccttatgcaccgtgcataaacacttcacaaccatca 4097911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 455 - 508
Target Start/End: Complemental strand, 8402026 - 8401973
Alignment:
Q  455 ctcacacgagcgcagatctacgagtnnnnnnncggaacaaaaagagaaaataaa 508  Q
    |||||||||||| ||||||||||||       ||||||||||||||||||||||    
T  8402026 ctcacacgagcgtagatctacgagtaaaaaaacggaacaaaaagagaaaataaa 8401973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Complemental strand, 11422612 - 11422584
Alignment:
Q  112 gttatggtgcataaggaaatccttatgca 140  Q
    |||||||||||||||||||||||||||||    
T  11422612 gttatggtgcataaggaaatccttatgca 11422584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Original strand, 23920973 - 23921001
Alignment:
Q  112 gttatggtgcataaggaaatccttatgca 140  Q
    |||||||||||||||||||||||||||||    
T  23920973 gttatggtgcataaggaaatccttatgca 23921001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 105 - 141
Target Start/End: Original strand, 41033262 - 41033298
Alignment:
Q  105 ggcaaaagttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||  |||||||||||    
T  41033262 ggcaaaagttatggtgcataaggatttccttatgcac 41033298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Original strand, 42133946 - 42133974
Alignment:
Q  112 gttatggtgcataaggaaatccttatgca 140  Q
    |||||||||||||||||||||||||||||    
T  42133946 gttatggtgcataaggaaatccttatgca 42133974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 113 - 141
Target Start/End: Original strand, 45849111 - 45849139
Alignment:
Q  113 ttatggtgcataaggaaatccttatgcac 141  Q
    |||||||||||||||||||||||||||||    
T  45849111 ttatggtgcataaggaaatccttatgcac 45849139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 103 - 170
Target Start/End: Complemental strand, 49937005 - 49936937
Alignment:
Q  103 ttggcaaaagttatggtgcataag-gaaatccttatgcactatgcagaaacactttacaaccatcagat 170  Q
    ||||||||||||||||||||||||  |  |||||||||||  |||| |||||| | |||||||||||||    
T  49937005 ttggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagat 49936937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 125; Significance: 4e-64; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 272 - 440
Target Start/End: Complemental strand, 52987544 - 52987376
Alignment:
Q  272 ctacaattcagatgagtcttcatctcttccggccacacatgatgattccggcacggcggccgccggtggcaccaccgcgccggatttcaatactccatcc 371  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| || ||  |||||||||||||||||||| ||||| ||| |||||    
T  52987544 ctacaattcagatgagtcttcatctctttcggccacacatgatgattccggcgcggtggtcggtggtggcaccaccgcgccggagttcaaaactgcatcc 52987445  T
Q  372 aaatcaaaaagttttcacggttttagacatccttttttgtgttgattccaaatatcgccttagatttct 440  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  52987444 aaatcaaaaagtttttacggttttagacatccttttttgtgttgattccaaatattgccttagatttct 52987376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 272 - 441
Target Start/End: Original strand, 50754175 - 50754344
Alignment:
Q  272 ctacaattcagatgagtcttcatctcttccggccacacatgatgattccggcacggcggccgccggtggcaccaccgcgccggatttcaatactccatcc 371  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||||| | | |||||  |||| ||||||||| ||||| ||||| ||||| |||    
T  50754175 ctacaattcagatgagtcttaatctcttccgaccacacatgatgattccggcgcagtggccggtggtgacaccaccgcaccggagttcaaaactccgtcc 50754274  T
Q  372 aaatcaaaaagttttcacggttttagacatccttttttgtgttgattccaaatatcgccttagatttctc 441  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50754275 aaatcaaaaagttttcacggttttagacatccttttttgtgttgattccaaatatcgccttagatttctc 50754344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 272 - 440
Target Start/End: Original strand, 31852277 - 31852445
Alignment:
Q  272 ctacaattcagatgagtcttcatctcttccggccacacatgatgattccggcacggcggccgccggtggcaccaccgcgccggatttcaatactccatcc 371  Q
    ||||| ||||||||||||||||||||||| || ||||||||| |||| |||| ||| |||||  ||||||||||| |||| ||| ||||| ||||| |||    
T  31852277 ctacagttcagatgagtcttcatctcttcagggcacacatgacgatttcggcgcggtggccggtggtggcaccactgcgctggagttcaaaactccgtcc 31852376  T
Q  372 aaatcaaaaagttttcacggttttagacatccttttttgtgttgattccaaatatcgccttagatttct 440  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  31852377 aaatcaaaaagttttcacggttttagacatccttttttgtgttgattccaaatatcgtcttagatttct 31852445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 105 - 203
Target Start/End: Complemental strand, 51362503 - 51362407
Alignment:
Q  105 ggcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatcttatgcttc 203  Q
    |||||||||||||||||||||||||||||||||||||  |||| |||||||| ||||||||||||| ||||||  ||||||||||||||| || |||||    
T  51362503 ggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaaccatcagatttagtgt--acacgtgtaataatcctaggcttc 51362407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 105 - 193
Target Start/End: Complemental strand, 19385380 - 19385294
Alignment:
Q  105 ggcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataat 193  Q
    |||||||||||||||||||||||||||||||||||||  |||| |||||||| ||||||||||||| ||||||  ||||||||||||||    
T  19385380 ggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaaccatcagatttagtgt--acacgtgtaataat 19385294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 107 - 203
Target Start/End: Original strand, 50754008 - 50754102
Alignment:
Q  107 caaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatcttatgcttc 203  Q
    ||||||||||||| |||||||||||||||||||||  |||| |||||||| ||||||||||||||||||||  ||||||||||||||| || |||||    
T  50754008 caaaagttatggtacataaggaaatccttatgcaccgtgcataaacacttcacaaccatcagatctagtgt--acacgtgtaataatcctaggcttc 50754102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 105 - 203
Target Start/End: Complemental strand, 7045365 - 7045269
Alignment:
Q  105 ggcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatcttatgcttc 203  Q
    ||||||||||||||||||||||||||| |||||||||  || | |||||||| ||||||||||||||||||||  ||||||||||||||| || |||||    
T  7045365 ggcaaaagttatggtgcataaggaaattcttatgcaccgtgtataaacacttcacaaccatcagatctagtgt--acacgtgtaataatcgtaggcttc 7045269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 105 - 180
Target Start/End: Original strand, 8718101 - 8718176
Alignment:
Q  105 ggcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtaca 180  Q
    |||||||||||||||||||||||||||||||||||||  | || ||| |||| |||||||||||||||||||||||    
T  8718101 ggcaaaagttatggtgcataaggaaatccttatgcaccgtacataaatacttcacaaccatcagatctagtgtaca 8718176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 105 - 180
Target Start/End: Original strand, 9069988 - 9070063
Alignment:
Q  105 ggcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtaca 180  Q
    |||||||||||||||||||||||||||||||||||||  | || ||| |||| |||||||||||||||||||||||    
T  9069988 ggcaaaagttatggtgcataaggaaatccttatgcaccgtacataaatacttcacaaccatcagatctagtgtaca 9070063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 109 - 203
Target Start/End: Complemental strand, 16277475 - 16277383
Alignment:
Q  109 aaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatcttatgcttc 203  Q
    |||||||||||||||||||||||| ||||||||  |||| |||||||| |||||||||| |||||||||  ||||||||||||||| || |||||    
T  16277475 aaagttatggtgcataaggaaatctttatgcaccgtgcataaacacttcacaaccatcatatctagtgt--acacgtgtaataatcctacgcttc 16277383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 118 - 203
Target Start/End: Complemental strand, 52987702 - 52987619
Alignment:
Q  118 gtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatcttatgcttc 203  Q
    ||||||||||||||||||||||||  |||| |||||||| ||||||||||||||||||||  ||||||||||||||| || |||||    
T  52987702 gtgcataaggaaatccttatgcaccgtgcataaacacttcacaaccatcagatctagtgt--acacgtgtaataatcctaggcttc 52987619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 272 - 323
Target Start/End: Complemental strand, 19385213 - 19385162
Alignment:
Q  272 ctacaattcagatgagtcttcatctcttccggccacacatgatgattccggc 323  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  19385213 ctacaattcagatgagtcttcatctcttccggccacagatgatgattccggc 19385162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 272 - 319
Target Start/End: Complemental strand, 51362333 - 51362286
Alignment:
Q  272 ctacaattcagatgagtcttcatctcttccggccacacatgatgattc 319  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  51362333 ctacaattcagatgagtcttcatctcttccggccacacatgatgattc 51362286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 272 - 321
Target Start/End: Complemental strand, 7045195 - 7045146
Alignment:
Q  272 ctacaattcagatgagtcttcatctcttccggccacacatgatgattccg 321  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  7045195 ctacaattcagatgagtcttcatctcttccagccacacatgatgattccg 7045146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 279 - 323
Target Start/End: Original strand, 8718318 - 8718362
Alignment:
Q  279 tcagatgagtcttcatctcttccggccacacatgatgattccggc 323  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  8718318 tcagatgagtcttcatctcttccggccacacatgatgattccggc 8718362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 279 - 323
Target Start/End: Original strand, 9070205 - 9070249
Alignment:
Q  279 tcagatgagtcttcatctcttccggccacacatgatgattccggc 323  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  9070205 tcagatgagtcttcatctcttccggccacacatgatgattccggc 9070249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 3863346 - 3863395
Alignment:
Q  16 caatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 65  Q
    ||||||| |||||||||||| ||||||| ||||||| |||||||||||||    
T  3863346 caatattgcacatgttaaggtaactaaaggtagtaacttttcattgaaaa 3863395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 11610931 - 11610980
Alignment:
Q  16 caatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 65  Q
    ||||||| |||||||||||| ||||||| ||||||| |||||||||||||    
T  11610931 caatattgcacatgttaaggcaactaaaagtagtaacttttcattgaaaa 11610980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 32553383 - 32553432
Alignment:
Q  16 caatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 65  Q
    |||||||||||||||||||| || |||| ||||||| |||||||||||||    
T  32553383 caatattacacatgttaaggtaattaaaagtagtaacttttcattgaaaa 32553432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 51339345 - 51339296
Alignment:
Q  16 caatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 65  Q
    ||||||| |||||||||||| |||||||  ||||||||||||||||||||    
T  51339345 caatattgcacatgttaaggtaactaaaaatagtaatttttcattgaaaa 51339296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 170
Target Start/End: Original strand, 9106266 - 9106333
Alignment:
Q  104 tggcaaaagttatggtgcataaggaaat-ccttatgcactatgcagaaacactttacaaccatcagat 170  Q
    |||||||||||||||||||||||  | | ||||||||||  |||| |||||| |||||||||||||||    
T  9106266 tggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacattacaaccatcagat 9106333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 147
Target Start/End: Original strand, 26662432 - 26662467
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcactatgca 147  Q
    ||||||||||||||||||||||||||||||| ||||    
T  26662432 gttatggtgcataaggaaatccttatgcactgtgca 26662467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 144 - 193
Target Start/End: Complemental strand, 17627257 - 17627210
Alignment:
Q  144 tgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataat 193  Q
    |||| |||||||| ||||||||||||||||||||  ||||||||||||||    
T  17627257 tgcataaacacttcacaaccatcagatctagtgt--acacgtgtaataat 17627210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 111 - 141
Target Start/End: Complemental strand, 27446256 - 27446226
Alignment:
Q  111 agttatggtgcataaggaaatccttatgcac 141  Q
    |||||||||||||||||||||||||||||||    
T  27446256 agttatggtgcataaggaaatccttatgcac 27446226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 16 - 66
Target Start/End: Original strand, 35094972 - 35095022
Alignment:
Q  16 caatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaaa 66  Q
    ||||||| |||||||||||| ||||||| | ||||| ||||||||||||||    
T  35094972 caatattgcacatgttaaggtaactaaaagcagtaacttttcattgaaaaa 35095022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 105 - 203
Target Start/End: Original strand, 39099189 - 39099293
Alignment:
Q  105 ggcaaaagttatggtgcataaggaaat--------ccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatctt 196  Q
    |||||||||||||||||||||| ||||        ||||||||||  |||| ||| | || ||||||||||||||||||||  ||||||||||||||| |    
T  39099189 ggcaaaagttatggtgcataagaaaattcttatttccttatgcaccgtgcataaatatttcacaaccatcagatctagtgt--acacgtgtaataatcct 39099286  T
Q  197 atgcttc 203  Q
    | |||||    
T  39099287 aggcttc 39099293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 111 - 141
Target Start/End: Complemental strand, 47924409 - 47924379
Alignment:
Q  111 agttatggtgcataaggaaatccttatgcac 141  Q
    |||||||||||||||||||||||||||||||    
T  47924409 agttatggtgcataaggaaatccttatgcac 47924379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 111 - 141
Target Start/End: Complemental strand, 50755235 - 50755205
Alignment:
Q  111 agttatggtgcataaggaaatccttatgcac 141  Q
    |||||||||||||||||||||||||||||||    
T  50755235 agttatggtgcataaggaaatccttatgcac 50755205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Original strand, 3475301 - 3475330
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  3475301 gttatggtgcataaggaaatccttatgcac 3475330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Original strand, 6097578 - 6097607
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  6097578 gttatggtgcataaggaaatccttatgcac 6097607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Original strand, 8036802 - 8036831
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  8036802 gttatggtgcataaggaaatccttatgcac 8036831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Complemental strand, 8719179 - 8719150
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  8719179 gttatggtgcataaggaaatccttatgcac 8719150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Complemental strand, 9071066 - 9071037
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  9071066 gttatggtgcataaggaaatccttatgcac 9071037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Complemental strand, 9106439 - 9106410
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  9106439 gttatggtgcataaggaaatccttatgcac 9106410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Original strand, 9595874 - 9595903
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  9595874 gttatggtgcataaggaaatccttatgcac 9595903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Complemental strand, 10986524 - 10986495
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  10986524 gttatggtgcataaggaaatccttatgcac 10986495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Original strand, 12974014 - 12974043
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  12974014 gttatggtgcataaggaaatccttatgcac 12974043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Complemental strand, 12974232 - 12974203
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  12974232 gttatggtgcataaggaaatccttatgcac 12974203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 65
Target Start/End: Original strand, 13495318 - 13495359
Alignment:
Q  24 cacatgttaaggaaactaaatgtagtaatttttcattgaaaa 65  Q
    |||||||||||| ||||||| |||||||||||| ||||||||    
T  13495318 cacatgttaaggtaactaaaagtagtaattttttattgaaaa 13495359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Original strand, 17620738 - 17620767
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  17620738 gttatggtgcataaggaaatccttatgcac 17620767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Complemental strand, 19284843 - 19284814
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  19284843 gttatggtgcataaggaaatccttatgcac 19284814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Original strand, 27068534 - 27068563
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  27068534 gttatggtgcataaggaaatccttatgcac 27068563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Original strand, 30947805 - 30947834
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  30947805 gttatggtgcataaggaaatccttatgcac 30947834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Original strand, 34562401 - 34562430
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  34562401 gttatggtgcataaggaaatccttatgcac 34562430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Complemental strand, 36185947 - 36185918
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  36185947 gttatggtgcataaggaaatccttatgcac 36185918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Original strand, 50416482 - 50416511
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  50416482 gttatggtgcataaggaaatccttatgcac 50416511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Complemental strand, 50416606 - 50416577
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  50416606 gttatggtgcataaggaaatccttatgcac 50416577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Original strand, 51361525 - 51361554
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  51361525 gttatggtgcataaggaaatccttatgcac 51361554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Complemental strand, 54379334 - 54379305
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  54379334 gttatggtgcataaggaaatccttatgcac 54379305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 113 - 141
Target Start/End: Original strand, 2941821 - 2941849
Alignment:
Q  113 ttatggtgcataaggaaatccttatgcac 141  Q
    |||||||||||||||||||||||||||||    
T  2941821 ttatggtgcataaggaaatccttatgcac 2941849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Original strand, 36185728 - 36185756
Alignment:
Q  112 gttatggtgcataaggaaatccttatgca 140  Q
    |||||||||||||||||||||||||||||    
T  36185728 gttatggtgcataaggaaatccttatgca 36185756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 64
Target Start/End: Original strand, 37444163 - 37444211
Alignment:
Q  16 caatattacacatgttaaggaaactaaatgtagtaatttttcattgaaa 64  Q
    ||||||| |||||||||||| ||||||| ||||||| |||| |||||||    
T  37444163 caatattgcacatgttaaggcaactaaaagtagtaactttttattgaaa 37444211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 123; Significance: 6e-63; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 272 - 441
Target Start/End: Complemental strand, 24737587 - 24737415
Alignment:
Q  272 ctacaattcagatgagtcttcatctcttccggccacacatgatgattccggcacggcggccgccggtgg---caccaccgcgccggatttcaatactcca 368  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| |||||   ||||||||||||||| ||||| |||||     
T  24737587 ctacaattcagatgagtcttcatctcttccggccacacatgatgattccggcacggtggtcgctggtggtggcaccaccgcgccggagttcaaaactccg 24737488  T
Q  369 tccaaatcaaaaagttttcacggttttagacatccttttttgtgttgattccaaatatcgccttagatttctc 441  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  24737487 tccaaatcaaatagttttcacggttttagacatccttttttgtgttgattcaaaatatctccttagatttctc 24737415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 285 - 438
Target Start/End: Original strand, 877387 - 877540
Alignment:
Q  285 gagtcttcatctcttccggccacacatgatgattccggcacggcggccgccggtggcaccaccgcgccggatttcaatactccatccaaatcaaaaagtt 384  Q
    |||||||||||||||| ||||||||||||||||||||||  || |||||  ||||||||||||||| |||| ||||| ||||| ||||||||||||||||    
T  877387 gagtcttcatctcttcaggccacacatgatgattccggcgtggtggccgatggtggcaccaccgcgtcggagttcaaaactccgtccaaatcaaaaagtt 877486  T
Q  385 ttcacggttttagacatccttttttgtgttgattccaaatatcgccttagattt 438  Q
    |||||  ||||||||||| |||||||||||||||||||||||||||||| ||||    
T  877487 ttcacaattttagacatcattttttgtgttgattccaaatatcgccttaaattt 877540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 272 - 441
Target Start/End: Complemental strand, 33346265 - 33346097
Alignment:
Q  272 ctacaattcagatgagtcttcatctcttccggccacacatgatgattccggcacggcggccgccggtggcaccaccgcgccggatttcaatactccatcc 371  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||  || |||||   |||||||||||||||  || ||||| ||||  |||    
T  33346265 ctacaattcagatgagtcttcatctctttcggccacacatgatgattccggcgtggtggccgatagtggcaccaccgcgctagagttcaaaactctgtcc 33346166  T
Q  372 aaatcaaaaagttttcacggttttagacatccttttttgtgttgattccaaatatcgccttagatttctc 441  Q
    |||| |||||    |||||| ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  33346165 aaat-aaaaaaaaatcacgggtttagacatccttttttgtgtcgattccaaatatcgccttagatttctc 33346097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 105 - 193
Target Start/End: Complemental strand, 33346436 - 33346350
Alignment:
Q  105 ggcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataat 193  Q
    |||||||||||||||||||||||||||||||||||||  |||| |||||||| |||||||||| |||||||||  ||||||||||||||    
T  33346436 ggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaaccatcaaatctagtgt--acacgtgtaataat 33346350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 105 - 193
Target Start/End: Original strand, 29157226 - 29157312
Alignment:
Q  105 ggcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataat 193  Q
    ||||||||||||  |||| ||||||||||||||||||  |||| |||||||||||||||||||||||||||||  ||||||||||||||    
T  29157226 ggcaaaagttatcatgcacaaggaaatccttatgcaccgtgcataaacactttacaaccatcagatctagtgt--acacgtgtaataat 29157312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 105 - 203
Target Start/End: Original strand, 34399641 - 34399737
Alignment:
Q  105 ggcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatcttatgcttc 203  Q
    |||||||||||||||||||||||||||||||||||||  |  | |||||||| |||| |||||||||||||||  ||||||||||||||| || |||||    
T  34399641 ggcaaaagttatggtgcataaggaaatccttatgcaccgtatataaacacttcacaatcatcagatctagtgt--acacgtgtaataatcctaggcttc 34399737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 105 - 180
Target Start/End: Complemental strand, 15035040 - 15034965
Alignment:
Q  105 ggcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtaca 180  Q
    |||||||||||||||||||||||||||||||||||||  |||| |||   || |||||||||||||||||||||||    
T  15035040 ggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaatcattcacaaccatcagatctagtgtaca 15034965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 105 - 180
Target Start/End: Original strand, 35119239 - 35119310
Alignment:
Q  105 ggcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtaca 180  Q
    ||||||||||||||||||||||    |||||||||||  |||| |||||||| |||||||||||||||||||||||    
T  35119239 ggcaaaagttatggtgcataag----tccttatgcaccgtgcataaacacttcacaaccatcagatctagtgtaca 35119310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 108 - 163
Target Start/End: Complemental strand, 12394442 - 12394387
Alignment:
Q  108 aaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaacc 163  Q
    ||||||||||||||||||||||||||||||||||  |||| |||||||| ||||||    
T  12394442 aaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaacc 12394387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 134 - 203
Target Start/End: Original strand, 18611218 - 18611285
Alignment:
Q  134 ttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatcttatgcttc 203  Q
    ||||||||| |||| |||||||| ||||||||||||||||||||  ||||||||||||||| || |||||    
T  18611218 ttatgcactctgcataaacacttcacaaccatcagatctagtgt--acacgtgtaataatcataggcttc 18611285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 105 - 138
Target Start/End: Original strand, 2759826 - 2759859
Alignment:
Q  105 ggcaaaagttatggtgcataaggaaatccttatg 138  Q
    ||||||||||||||||||||||||||||||||||    
T  2759826 ggcaaaagttatggtgcataaggaaatccttatg 2759859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 5363054 - 5363005
Alignment:
Q  16 caatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 65  Q
    ||||||| |||||||||||| ||||||| ||||||| |||||||||||||    
T  5363054 caatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaa 5363005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 12454082 - 12454131
Alignment:
Q  16 caatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 65  Q
    ||||||| ||||||||||| ||| ||||||||||||||||| ||||||||    
T  12454082 caatattgcacatgttaagaaaattaaatgtagtaattttttattgaaaa 12454131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 135 - 203
Target Start/End: Complemental strand, 24737726 - 24737660
Alignment:
Q  135 tatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatcttatgcttc 203  Q
    |||||||  |||| |||||||| ||||||||||||||||||||  ||||||||||||||| || |||||    
T  24737726 tatgcaccgtgcataaacacttcacaaccatcagatctagtgt--acacgtgtaataatcctaggcttc 24737660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 26602592 - 26602543
Alignment:
Q  16 caatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 65  Q
    ||||||| ||||| |||||||||||||| |||||||||||||| ||||||    
T  26602592 caatattgcacatattaaggaaactaaaagtagtaatttttcactgaaaa 26602543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 64
Target Start/End: Complemental strand, 2086997 - 2086949
Alignment:
Q  16 caatattacacatgttaaggaaactaaatgtagtaatttttcattgaaa 64  Q
    ||||||| |||||||||||| || |||| ||||||||||||||||||||    
T  2086997 caatattgcacatgttaaggtaattaaaagtagtaatttttcattgaaa 2086949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 66
Target Start/End: Complemental strand, 31791078 - 31791027
Alignment:
Q  16 caatattacacatgttaa-ggaaactaaatgtagtaatttttcattgaaaaa 66  Q
    ||||||| |||||||||| |||||||||||||||||| |||| |||||||||    
T  31791078 caatattgcacatgttaaaggaaactaaatgtagtaactttttattgaaaaa 31791027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 65
Target Start/End: Complemental strand, 2830839 - 2830793
Alignment:
Q  19 tattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 65  Q
    |||| |||||||||||| ||||||| ||||||| |||||||||||||    
T  2830839 tattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaa 2830793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 65
Target Start/End: Complemental strand, 22974731 - 22974685
Alignment:
Q  19 tattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 65  Q
    |||| |||||||||||| ||||||| ||||||| |||||||||||||    
T  22974731 tattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaa 22974685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 23813670 - 23813716
Alignment:
Q  19 tattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 65  Q
    |||| |||||||||||| ||||||| ||||||| |||||||||||||    
T  23813670 tattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaa 23813716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Complemental strand, 6900975 - 6900946
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  6900975 gttatggtgcataaggaaatccttatgcac 6900946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Complemental strand, 7765446 - 7765417
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  7765446 gttatggtgcataaggaaatccttatgcac 7765417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Complemental strand, 10588995 - 10588966
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  10588995 gttatggtgcataaggaaatccttatgcac 10588966  T

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Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Original strand, 14237780 - 14237809
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  14237780 gttatggtgcataaggaaatccttatgcac 14237809  T

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Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Complemental strand, 15493346 - 15493317
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  15493346 gttatggtgcataaggaaatccttatgcac 15493317  T

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Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Original strand, 18755665 - 18755694
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  18755665 gttatggtgcataaggaaatccttatgcac 18755694  T

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Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Original strand, 19284373 - 19284402
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  19284373 gttatggtgcataaggaaatccttatgcac 19284402  T

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Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Complemental strand, 20522890 - 20522861
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  20522890 gttatggtgcataaggaaatccttatgcac 20522861  T

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Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Complemental strand, 21385031 - 21385002
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  21385031 gttatggtgcataaggaaatccttatgcac 21385002  T

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Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Original strand, 22857490 - 22857519
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  22857490 gttatggtgcataaggaaatccttatgcac 22857519  T

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Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Original strand, 34869957 - 34869986
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  34869957 gttatggtgcataaggaaatccttatgcac 34869986  T

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Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 317 - 361
Target Start/End: Complemental strand, 5995733 - 5995689
Alignment:
Q  317 ttccggcacggcggccgccggtggcaccaccgcgccggatttcaa 361  Q
    ||||||||||| |||||  |||||||||||||||||||| |||||    
T  5995733 ttccggcacggtggccggtggtggcaccaccgcgccggagttcaa 5995689  T

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Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Complemental strand, 25119512 - 25119484
Alignment:
Q  112 gttatggtgcataaggaaatccttatgca 140  Q
    |||||||||||||||||||||||||||||    
T  25119512 gttatggtgcataaggaaatccttatgca 25119484  T

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Target: scaffold0097 (Bit Score: 61; Significance: 6e-26; HSPs: 2)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 104 - 203
Target Start/End: Original strand, 13612 - 13709
Alignment:
Q  104 tggcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatcttatgcttc 203  Q
    |||||||||||||||||||||||||||||||||| |||  |||| |||||||| |||||||||||||||||||||||||  |||||||||| || |||||    
T  13612 tggcaaaagttatggtgcataaggaaatccttatccaccgtgcataaacacttcacaaccatcagatctagtgtacaca--tgtaataatcctacgcttc 13709  T

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Target: scaffold0097; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 279 - 322
Target Start/End: Original strand, 13820 - 13863
Alignment:
Q  279 tcagatgagtcttcatctcttccggccacacatgatgattccgg 322  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    
T  13820 tcagatgagtcttcatctcttccggtcacacatgatgattccgg 13863  T

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Target: scaffold0238 (Bit Score: 60; Significance: 2e-25; HSPs: 2)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 103 - 197
Target Start/End: Complemental strand, 25299 - 25207
Alignment:
Q  103 ttggcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatctta 197  Q
    |||||||||||||||||||||||||||||||||||||||  |||| |||||||| ||||||||||||| ||||||  |||||||| |||||||||    
T  25299 ttggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaaccatcagatttagtgt--acacgtgtcataatctta 25207  T

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Target: scaffold0238; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 272 - 323
Target Start/End: Complemental strand, 25119 - 25068
Alignment:
Q  272 ctacaattcagatgagtcttcatctcttccggccacacatgatgattccggc 323  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25119 ctacaattcagatgagtcttcatctcttccggccacacatgatgattccggc 25068  T

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Target: scaffold0544 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 106 - 177
Target Start/End: Complemental strand, 10739 - 10668
Alignment:
Q  106 gcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgt 177  Q
    |||||||||||||||||||||||||||||||| |||  |||| |||||||| ||||||||||||||||||||    
T  10739 gcaaaagttatggtgcataaggaaatccttatacaccgtgcataaacacttcacaaccatcagatctagtgt 10668  T

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Target: scaffold0337 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 108 - 194
Target Start/End: Original strand, 7020 - 7104
Alignment:
Q  108 aaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataatc 194  Q
    |||||||||||||||||| |||||| |||| |||  |||| |||||||| |||||||||||||||||||||||||  ||||||||||    
T  7020 aaaagttatggtgcataacgaaatctttatacaccgtgcataaacacttcacaaccatcagatctagtgtacaca--tgtaataatc 7104  T

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Target: scaffold0189 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 105 - 167
Target Start/End: Complemental strand, 11255 - 11193
Alignment:
Q  105 ggcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatca 167  Q
    |||||||||||||||||||||||||||||||||||||| |||| || ||||| ||||||||||    
T  11255 ggcaaaagttatggtgcataaggaaatccttatgcactgtgcataagcacttcacaaccatca 11193  T

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Target: scaffold0194 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 279 - 323
Target Start/End: Original strand, 27816 - 27860
Alignment:
Q  279 tcagatgagtcttcatctcttccggccacacatgatgattccggc 323  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  27816 tcagatgagtcttcatctcttccggccacacatgatgattccggc 27860  T

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Target: scaffold0194; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 105 - 193
Target Start/End: Original strand, 27607 - 27693
Alignment:
Q  105 ggcaaaagttatggtgcataaggaaatccttatgcactatgcagaaacactttacaaccatcagatctagtgtacacacgtgtaataat 193  Q
    ||||||||||||||||||||||||||  |||||| ||  |||| |||||||| ||||| || |||||||||||  ||||||||||||||    
T  27607 ggcaaaagttatggtgcataaggaaaaacttatgtaccgtgcataaacacttcacaactataagatctagtgt--acacgtgtaataat 27693  T

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Target: scaffold0061 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 52940 - 52891
Alignment:
Q  16 caatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 65  Q
    ||||||| |||||||||||| ||||||| ||||||| |||||||||||||    
T  52940 caatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaa 52891  T

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Target: scaffold0017 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 145694 - 145743
Alignment:
Q  16 caatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 65  Q
    ||||||| |||||||||||| ||||||| ||||||| |||||||||||||    
T  145694 caatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaa 145743  T

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Target: scaffold0011 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 13102 - 13151
Alignment:
Q  16 caatattacacatgttaaggaaactaaatgtagtaatttttcattgaaaa 65  Q
    ||||||| || ||||||||| ||||||| |||||||||||||||||||||    
T  13102 caatattgcatatgttaaggtaactaaaagtagtaatttttcattgaaaa 13151  T

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Target: scaffold0338 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 111 - 147
Target Start/End: Complemental strand, 6556 - 6520
Alignment:
Q  111 agttatggtgcataaggaaatccttatgcactatgca 147  Q
    ||||||||||||||||||||||||||||||| |||||    
T  6556 agttatggtgcataaggaaatccttatgcaccatgca 6520  T

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Target: scaffold0206 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 317 - 408
Target Start/End: Complemental strand, 19557 - 19467
Alignment:
Q  317 ttccggcacggcggccgccggtggcaccaccgcgccggatttcaatactccatccaaatcaaaaagttttcacggttttagacatccttttt 408  Q
    ||||||| ||| ||||| ||||||||||||||||||||| ||| | ||||| ||| | ||||||| |||| ||  ||||| |||||||||||    
T  19557 ttccggcgcggtggccggcggtggcaccaccgcgccggagttctaaactcc-tccgattcaaaaactttttacatttttaaacatccttttt 19467  T

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Target: scaffold0581 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0581
Description:

Target: scaffold0581; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 105 - 170
Target Start/End: Complemental strand, 8487 - 8421
Alignment:
Q  105 ggcaaaagttatggtgcataaggaaat-ccttatgcactatgcagaaacactttacaaccatcagat 170  Q
    ||||||||||||||||||||||  | | ||||||||||| |||| |||||| | |||||||||||||    
T  8487 ggcaaaagttatggtgcataagccatttccttatgcactgtgcataaacacatcacaaccatcagat 8421  T

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Target: scaffold0571 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0571
Description:

Target: scaffold0571; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Original strand, 547 - 576
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  547 gttatggtgcataaggaaatccttatgcac 576  T

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Target: scaffold0516 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Complemental strand, 1290 - 1261
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  1290 gttatggtgcataaggaaatccttatgcac 1261  T

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Target: scaffold0249 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Original strand, 23546 - 23575
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  23546 gttatggtgcataaggaaatccttatgcac 23575  T

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Target: scaffold0249; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 113 - 141
Target Start/End: Complemental strand, 23776 - 23748
Alignment:
Q  113 ttatggtgcataaggaaatccttatgcac 141  Q
    |||||||||||||||||||||||||||||    
T  23776 ttatggtgcataaggaaatccttatgcac 23748  T

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Target: scaffold0129 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Complemental strand, 20162 - 20133
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  20162 gttatggtgcataaggaaatccttatgcac 20133  T

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Target: scaffold0102 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Original strand, 33618 - 33647
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  33618 gttatggtgcataaggaaatccttatgcac 33647  T

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Target: scaffold0074 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 141
Target Start/End: Complemental strand, 24446 - 24417
Alignment:
Q  112 gttatggtgcataaggaaatccttatgcac 141  Q
    ||||||||||||||||||||||||||||||    
T  24446 gttatggtgcataaggaaatccttatgcac 24417  T

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Target: scaffold1450 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold1450
Description:

Target: scaffold1450; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 140
Target Start/End: Original strand, 752 - 780
Alignment:
Q  112 gttatggtgcataaggaaatccttatgca 140  Q
    |||||||||||||||||||||||||||||    
T  752 gttatggtgcataaggaaatccttatgca 780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 113 - 141
Target Start/End: Original strand, 51908 - 51936
Alignment:
Q  113 ttatggtgcataaggaaatccttatgcac 141  Q
    |||||||||||||||||||||||||||||    
T  51908 ttatggtgcataaggaaatccttatgcac 51936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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