View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10090_low_3 (Length: 327)

Name: NF10090_low_3
Description: NF10090
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10090_low_3
NF10090_low_3
[»] chr4 (14 HSPs)
chr4 (9-312)||(41074807-41075116)
chr4 (91-184)||(14320962-14321055)
chr4 (91-184)||(14322132-14322225)
chr4 (98-184)||(14321708-14321794)
chr4 (98-184)||(14320540-14320626)
chr4 (186-236)||(46020667-46020717)
chr4 (186-229)||(46015435-46015478)
chr4 (194-236)||(46021346-46021388)
chr4 (193-231)||(46304201-46304239)
chr4 (186-231)||(46246221-46246266)
chr4 (195-236)||(46303770-46303811)
chr4 (186-230)||(46015982-46016026)
chr4 (129-189)||(46027955-46028014)
chr4 (129-189)||(46428272-46428332)
[»] scaffold0384 (4 HSPs)
scaffold0384 (91-189)||(5609-5708)
scaffold0384 (14-131)||(4509-4626)
scaffold0384 (189-236)||(4145-4192)
scaffold0384 (147-189)||(4206-4248)
[»] chr1 (9 HSPs)
chr1 (24-236)||(50668398-50668626)
chr1 (61-189)||(50667974-50668102)
chr1 (184-233)||(3802615-3802664)
chr1 (126-184)||(3801754-3801812)
chr1 (115-189)||(50667366-50667440)
chr1 (193-234)||(3804059-3804100)
chr1 (191-236)||(50668119-50668164)
chr1 (184-236)||(3802173-3802225)
chr1 (192-236)||(50669344-50669388)
[»] scaffold0079 (4 HSPs)
scaffold0079 (14-131)||(7027-7144)
scaffold0079 (189-236)||(6706-6753)
scaffold0079 (103-155)||(7857-7909)
scaffold0079 (147-189)||(6767-6809)
[»] chr5 (1 HSPs)
chr5 (29-124)||(8185984-8186079)
[»] chr8 (3 HSPs)
chr8 (201-232)||(4525277-4525308)
chr8 (186-232)||(4522904-4522950)
chr8 (145-183)||(39328272-39328310)
[»] chr7 (1 HSPs)
chr7 (29-124)||(715259-715350)


Alignment Details
Target: chr4 (Bit Score: 234; Significance: 1e-129; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 9 - 312
Target Start/End: Original strand, 41074807 - 41075116
Alignment:
Q  9 agcagagaggaaaattctcatgtgacaaccaacccgtttcttgatgagatgcaagaagtagaaagtaagttttactcaacactgtattaatatattcttt 108  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41074807 agcatagaggaaaattctcatgtgacaaccaacccgtttcttgatgagatgcaagaagtagaaagtaagttttactcaacactgtattaatatattcttt 41074906  T
Q  109 gcggttgaattaatttacatttcgtccatttgttatgatttagattttgacggtagaaccatgggaagatacaattattttgtgaaaatgctagctcttg 208  Q
    | |||||||||||||| ||| |||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||    
T  41074907 gtggttgaattaatttgcatctcgtccatttgttatgatttagattttgacggtaaaaccatgggaagatgcaattattttgtgaaaatgctagctcttg 41075006  T
Q  209 attgagtgttaatatgcacataagttggnnnnnnnggctgttatatttgtcttctattatgtttttgccttgtccttttc------aactttcagccata 302  Q
    |||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||| |||||      ||||||||||||||    
T  41075007 attgagtgttaatatgcacataagttgatttttttggctgttatatttgtcttctattatgtttttgccttgtctttttcttttttaactttcagccata 41075106  T
Q  303 ttgaaatatc 312  Q
    ||||||||||    
T  41075107 ttgaaatatc 41075116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 91 - 184
Target Start/End: Original strand, 14320962 - 14321055
Alignment:
Q  91 tgtattaatatattctttgcggttgaattaatttacatttcgtccatttgttatgatttagattttgacggtagaaccatgggaagatacaatt 184  Q
    ||||||||||| |||||| | |||||||||||||||| ||| |||||||||| ||||||||||||||||   ||||||||| ||||||||||||    
T  14320962 tgtattaatatgttctttacagttgaattaatttacacttcatccatttgttgtgatttagattttgacataagaaccatgtgaagatacaatt 14321055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 91 - 184
Target Start/End: Original strand, 14322132 - 14322225
Alignment:
Q  91 tgtattaatatattctttgcggttgaattaatttacatttcgtccatttgttatgatttagattttgacggtagaaccatgggaagatacaatt 184  Q
    ||||||||||| |||||| | ||||||||||||| || ||| |||||||||| ||||||||||||||||   ||||||||| ||||||||||||    
T  14322132 tgtattaatatgttctttacagttgaattaatttgcacttcatccatttgttgtgatttagattttgacataagaaccatgtgaagatacaatt 14322225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 98 - 184
Target Start/End: Original strand, 14321708 - 14321794
Alignment:
Q  98 atatattctttgcggttgaattaatttacatttcgtccatttgttatgatttagattttgacggtagaaccatgggaagatacaatt 184  Q
    |||| |||||||  ||||||||||| | || ||| ||||||||| ||||||||||| || || ||||||||||||||||||||||||    
T  14321708 atatgttctttggagttgaattaatctgcacttcatccatttgtcatgatttagatattaactgtagaaccatgggaagatacaatt 14321794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 98 - 184
Target Start/End: Original strand, 14320540 - 14320626
Alignment:
Q  98 atatattctttgcggttgaattaatttacatttcgtccatttgttatgatttagattttgacggtagaaccatgggaagatacaatt 184  Q
    |||| |||||||  ||||||||||| | || ||| ||||||||| ||||||||||| || || ||||||||||| ||||||||||||    
T  14320540 atatgttctttggagttgaattaatctgcacttcatccatttgtcatgatttagatattaactgtagaaccatgtgaagatacaatt 14320626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 236
Target Start/End: Original strand, 46020667 - 46020717
Alignment:
Q  186 ttttgtgaaaatgctagctcttgattgagtgttaatatgcacataagttgg 236  Q
    |||| ||||||||| | ||||||||||||||||||||||||||||| ||||    
T  46020667 ttttatgaaaatgcaacctcttgattgagtgttaatatgcacataatttgg 46020717  T

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Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 186 - 229
Target Start/End: Original strand, 46015435 - 46015478
Alignment:
Q  186 ttttgtgaaaatgctagctcttgattgagtgttaatatgcacat 229  Q
    |||| ||||||||| | |||||||||||||||||||||||||||    
T  46015435 ttttatgaaaatgcaacctcttgattgagtgttaatatgcacat 46015478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 236
Target Start/End: Original strand, 46021346 - 46021388
Alignment:
Q  194 aaatgctagctcttgattgagtgttaatatgcacataagttgg 236  Q
    |||||| | ||||||||||| ||||||||||||||||||||||    
T  46021346 aaatgcaacctcttgattgaatgttaatatgcacataagttgg 46021388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 231
Target Start/End: Complemental strand, 46304239 - 46304201
Alignment:
Q  193 aaaatgctagctcttgattgagtgttaatatgcacataa 231  Q
    ||||||| |||||||| ||||||||||||||||||||||    
T  46304239 aaaatgcaagctcttgtttgagtgttaatatgcacataa 46304201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 231
Target Start/End: Complemental strand, 46246266 - 46246221
Alignment:
Q  186 ttttgtgaaaatgctagctcttgattgagtgttaatatgcacataa 231  Q
    |||| ||||||||| | ||||||||||| |||||||||||||||||    
T  46246266 ttttatgaaaatgcaacctcttgattgaatgttaatatgcacataa 46246221  T

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Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 236
Target Start/End: Complemental strand, 46303811 - 46303770
Alignment:
Q  195 aatgctagctcttgattgagtgttaatatgcacataagttgg 236  Q
    ||||| |||||||||||  |||||||||||||||||||||||    
T  46303811 aatgcaagctcttgattttgtgttaatatgcacataagttgg 46303770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 230
Target Start/End: Original strand, 46015982 - 46016026
Alignment:
Q  186 ttttgtgaaaatgctagctcttgattgagtgttaatatgcacata 230  Q
    |||| ||||||||| || |||||||||||||||||||| ||||||    
T  46015982 ttttatgaaaatgcaagttcttgattgagtgttaatatacacata 46016026  T

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Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 189
Target Start/End: Original strand, 46027955 - 46028014
Alignment:
Q  129 ttcgtccatttgttatgatttagattttgacggtagaaccatgggaagatacaattatttt 189  Q
    ||||||||| |||||||||||| ||||||||  || ||| ||| |||||||||||||||||    
T  46027955 ttcgtccatctgttatgatttaaattttgacttta-aactatgtgaagatacaattatttt 46028014  T

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Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 189
Target Start/End: Original strand, 46428272 - 46428332
Alignment:
Q  129 ttcgtccatttgttatgatttagattttgacggtagaaccatgggaagatacaattatttt 189  Q
    ||||||||  |||||||||||| ||||||||  || ||| ||| |||||||||||||||||    
T  46428272 ttcgtccaactgttatgatttacattttgactttaaaactatgcgaagatacaattatttt 46428332  T

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Target: scaffold0384 (Bit Score: 64; Significance: 6e-28; HSPs: 4)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 91 - 189
Target Start/End: Complemental strand, 5708 - 5609
Alignment:
Q  91 tgtattaatatatt-ctttgcggttgaattaatttacatttcgtccatttgttatgatttagattttgacggtagaaccatgggaagatacaattatttt 189  Q
    |||||||||||||| |||||||||||||||||||| |||||| ||||| | |||||||||||||||| || |||||||||||||||||||||||| ||||    
T  5708 tgtattaatatatttctttgcggttgaattaatttgcatttcatccatctattatgatttagatttttaccgtagaaccatgggaagatacaattctttt 5609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 14 - 131
Target Start/End: Complemental strand, 4626 - 4509
Alignment:
Q  14 agaggaaaattctcatgtgacaaccaacccgtttcttgatgagatgcaagaagtagaaagtaagttttactcaacactgtattaatatattctttgcggt 113  Q
    |||||||||  ||| |||||||| ||||||| |||||   ||||| ||||||| |||||||||||||||||||    ||||||||||| |||||||||||    
T  4626 agaggaaaagcctcgtgtgacaatcaacccgattcttctcgagatacaagaagcagaaagtaagttttactcagtcttgtattaatatgttctttgcggt 4527  T
Q  114 tgaattaatttacatttc 131  Q
    ||||||||||| ||||||    
T  4526 tgaattaatttgcatttc 4509  T

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Target: scaffold0384; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 189 - 236
Target Start/End: Complemental strand, 4192 - 4145
Alignment:
Q  189 tgtgaaaatgctagctcttgattgagtgttaatatgcacataagttgg 236  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||    
T  4192 tgtgaaaatgctagctctagattgagtgttaatatgcacataagttgg 4145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 147 - 189
Target Start/End: Complemental strand, 4248 - 4206
Alignment:
Q  147 tttagattttgacggtagaaccatgggaagatacaattatttt 189  Q
    |||| |||||||||||||||||||||||| |||||||| ||||    
T  4248 tttaaattttgacggtagaaccatgggaaaatacaattctttt 4206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 59; Significance: 6e-25; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 24 - 236
Target Start/End: Original strand, 50668398 - 50668626
Alignment:
Q  24 tctcatgtgacaaccaacccgtttcttgatgagatgcaagaagtagaaagtaagttttactcaacac--tgtattaatatattctttgcggttgaattaa 121  Q
    |||| |||||| ||||| |||||| ||| |||||  ||||||||||||||||||||||||||   |   ||||||||||| |||||||| ||||||||||    
T  50668398 tctcttgtgacgaccaaaccgtttgttgctgagaaacaagaagtagaaagtaagttttactcttgatgttgtattaatatgttctttgcagttgaattaa 50668497  T
Q  122 tttacatttcgtccatttgttatgatttagattttgacggtagaaccatgggaagatacaattat--------------tttgtgaaaatgctagctctt 207  Q
    | | || ||| ||||||||| |||||||||||||||||  ||||| |||| ||| ||| |||| |              ||| ||||||||| |||||||    
T  50668498 tctgcacttcatccatttgtcatgatttagattttgactttagaagcatgtgaaaatagaattctttttgctttactgctttatgaaaatgcaagctctt 50668597  T
Q  208 gattgagtgttaatatgcacataagttgg 236  Q
    ||| |||||||||||||||||||||||||    
T  50668598 gatcgagtgttaatatgcacataagttgg 50668626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 61 - 189
Target Start/End: Original strand, 50667974 - 50668102
Alignment:
Q  61 aagaagtagaaagtaagttttactcaacactgtattaatatattctttgcggttgaattaatttacatttcgtccatttgttatgatttagattttgacg 160  Q
    |||||||||||||||||||| |||| |   |||| | |||| |||||||| ||||||||| ||| || ||||||||| ||| |||||||| ||||||||     
T  50667974 aagaagtagaaagtaagtttcactcgatgttgtaatcatatgttctttgcagttgaattagtttgcacttcgtccatatgtcatgatttaaattttgact 50668073  T
Q  161 gtagaaccatgggaagatacaattatttt 189  Q
     |||||||||| |||||||||||| ||||    
T  50668074 ttagaaccatgtgaagatacaattttttt 50668102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 233
Target Start/End: Complemental strand, 3802664 - 3802615
Alignment:
Q  184 tattttgtgaaaatgctagctcttgattgagtgttaatatgcacataagt 233  Q
    |||||| ||||||||| | |||||||||||||||||||||||||||||||    
T  3802664 tattttatgaaaatgcaacctcttgattgagtgttaatatgcacataagt 3802615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 3801812 - 3801754
Alignment:
Q  126 catttcgtccatttgttatgatttagattttgacggtagaaccatgggaagatacaatt 184  Q
    |||||| ||||| |||||||||||||||||||||  || ||||||| ||||| ||||||    
T  3801812 catttcatccatctgttatgatttagattttgactttaaaaccatgtgaagacacaatt 3801754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 115 - 189
Target Start/End: Original strand, 50667366 - 50667440
Alignment:
Q  115 gaattaatttacatttcgtccatttgttatgatttagattttgacggtagaaccatgggaagatacaattatttt 189  Q
    |||||||||| || ||| ||| ||||| |||||||||||||||||  ||||||||||  ||||| ||||| ||||    
T  50667366 gaattaattttcacttcatccttttgtcatgatttagattttgactttagaaccatgtcaagatgcaattctttt 50667440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 234
Target Start/End: Complemental strand, 3804100 - 3804059
Alignment:
Q  193 aaaatgctagctcttgattgagtgttaatatgcacataagtt 234  Q
    ||||||| ||||||||||||||||||||||||  ||||||||    
T  3804100 aaaatgcaagctcttgattgagtgttaatatgtgcataagtt 3804059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 236
Target Start/End: Original strand, 50668119 - 50668164
Alignment:
Q  191 tgaaaatgctagctcttgattgagtgttaatatgcacataagttgg 236  Q
    ||||||||| ||||||| ||||| ||||||||||||| ||||||||    
T  50668119 tgaaaatgcaagctcttaattgaatgttaatatgcacgtaagttgg 50668164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 3802225 - 3802173
Alignment:
Q  184 tattttgtgaaaatgctagctcttgattgagtgttaatatgcacataagttgg 236  Q
    |||||| ||||||| | | |||||| ||||||||||||||||||||| |||||    
T  3802225 tattttatgaaaatacaacctcttgtttgagtgttaatatgcacataggttgg 3802173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 236
Target Start/End: Original strand, 50669344 - 50669388
Alignment:
Q  192 gaaaatgctagctcttgattgagtgttaatatgcacataagttgg 236  Q
    |||||||||||||  ||||| |||||||||| |||||||||||||    
T  50669344 gaaaatgctagctactgattcagtgttaatacgcacataagttgg 50669388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 50; Significance: 1e-19; HSPs: 4)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 14 - 131
Target Start/End: Complemental strand, 7144 - 7027
Alignment:
Q  14 agaggaaaattctcatgtgacaaccaacccgtttcttgatgagatgcaagaagtagaaagtaagttttactcaacactgtattaatatattctttgcggt 113  Q
    |||||||||  ||| |||||||| ||||||| |||||   ||||| ||||||| ||| |||||||||||||||    ||||||||||| |||||||||||    
T  7144 agaggaaaagcctcgtgtgacaatcaacccgattcttcccgagatacaagaagcagagagtaagttttactcagtcttgtattaatatgttctttgcggt 7045  T
Q  114 tgaattaatttacatttc 131  Q
    ||||||||||| ||||||    
T  7044 tgaattaatttgcatttc 7027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 189 - 236
Target Start/End: Complemental strand, 6753 - 6706
Alignment:
Q  189 tgtgaaaatgctagctcttgattgagtgttaatatgcacataagttgg 236  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  6753 tgtgaaaatgctagctcttgattgagtgttaatatgcacataagttgg 6706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 103 - 155
Target Start/End: Complemental strand, 7909 - 7857
Alignment:
Q  103 ttctttgcggttgaattaatttacatttcgtccatttgttatgatttagattt 155  Q
    |||||||||||||||||||||| |||||| ||||| | |||||||||||||||    
T  7909 ttctttgcggttgaattaatttgcatttcatccatctattatgatttagattt 7857  T

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Target: scaffold0079; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 147 - 189
Target Start/End: Complemental strand, 6809 - 6767
Alignment:
Q  147 tttagattttgacggtagaaccatgggaagatacaattatttt 189  Q
    |||| |||||||||||||||||||||||| |||||||| ||||    
T  6809 tttaaattttgacggtagaaccatgggaaaatacaattctttt 6767  T

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Target: chr5 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 29 - 124
Target Start/End: Original strand, 8185984 - 8186079
Alignment:
Q  29 tgtgacaaccaacccgtttcttgatgagatgcaagaagtagaaagtaagttttactcaacactgtattaatatattctttgcggttgaattaattt 124  Q
    |||||| ||||||| |||| |||  |||| |||||| ||||||||||||||||||||||   ||||||||||| |||||||| |||||||||||||    
T  8185984 tgtgacgaccaacctgttttttgccgagaagcaagatgtagaaagtaagttttactcaatgttgtattaatatgttctttgcagttgaattaattt 8186079  T

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Target: chr8 (Bit Score: 32; Significance: 0.000000007; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 201 - 232
Target Start/End: Complemental strand, 4525308 - 4525277
Alignment:
Q  201 agctcttgattgagtgttaatatgcacataag 232  Q
    ||||||||||||||||||||||||||||||||    
T  4525308 agctcttgattgagtgttaatatgcacataag 4525277  T

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Target: chr8; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 232
Target Start/End: Complemental strand, 4522950 - 4522904
Alignment:
Q  186 ttttgtgaaaatgctagctcttgattgagtgttaatatgcacataag 232  Q
    |||| ||||||| | |||||||||||||||||||| |||||||||||    
T  4522950 ttttatgaaaattcaagctcttgattgagtgttaaaatgcacataag 4522904  T

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Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 183
Target Start/End: Original strand, 39328272 - 39328310
Alignment:
Q  145 gatttagattttgacggtagaaccatgggaagatacaat 183  Q
    ||||||||||||||| ||||||||||| |||||||||||    
T  39328272 gatttagattttgactgtagaaccatgtgaagatacaat 39328310  T

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Target: chr7 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 124
Target Start/End: Original strand, 715259 - 715350
Alignment:
Q  29 tgtgacaaccaacccgtttcttgatgagatgcaagaagtagaaagtaagttttactcaacactgtattaatatattctttgcggttgaattaattt 124  Q
    |||||||| | | |||||||||  | ||| ||||||||||||||||    |||||||||   ||||||||||| ||||||| ||||||||||||||    
T  715259 tgtgacaagcgaaccgtttctttcttagaagcaagaagtagaaagt----tttactcaatgttgtattaatatgttctttgtggttgaattaattt 715350  T

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