View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10092A_low_164 (Length: 260)
Name: NF10092A_low_164
Description: NF10092A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10092A_low_164 |
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Alignment Details
Target: chr4 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 24 - 229
Target Start/End: Original strand, 27299199 - 27299404
Alignment:
| Q |
24 |
gtttgttctaatttgccgtcgaatttaacttcaaagtgaaaaatcgctatcaacacacgtataataaataatgacatatggtctccaataaatctccatc |
123 |
Q |
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| T |
27299199 |
gtttgttctaatttgccgtcgaatttaacttcaaagttaaaaatcgctatcaacacacgtataataaataatgacatatggtctccaataaatctccatc |
27299298 |
T |
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| Q |
124 |
ttcttcctactgtcttagcaccatgctagagagtttgatagtggagacaagaagtggttgtagcagactagtagacaagaattgcaattctacataaata |
223 |
Q |
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||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27299299 |
ttcttcctactgtcttagcaccatgctagagagtttgatggtggagacaagaaatggttgtagcagactagtagacaagaattgcaattctacataaata |
27299398 |
T |
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| Q |
224 |
caatga |
229 |
Q |
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|||||| |
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| T |
27299399 |
caatga |
27299404 |
T |
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