View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10092A_low_181 (Length: 254)
Name: NF10092A_low_181
Description: NF10092A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10092A_low_181 |
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Alignment Details
Target: chr7 (Bit Score: 173; Significance: 4e-93; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 19 - 195
Target Start/End: Original strand, 3185232 - 3185408
Alignment:
| Q |
19 |
agtttgaaatacatcttgatattctgcaaagtacaaagaaacattaatatatttaattaagtaatattaaaaactaatgttttaagaatctcaactaaat |
118 |
Q |
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| T |
3185232 |
agtttgaaatacatcttgatattctgcaaagtacaaagaaacattaatatatttaattaaataatattaaaaactaatgttttaagaatctcaactaaat |
3185331 |
T |
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| Q |
119 |
ataccttgagtccttgatttggatatagctctgcatcttttctcttgtttgtctttagcaactaaggacacagcacc |
195 |
Q |
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| T |
3185332 |
ataccttgagtccttgatttggatatagctctgcatcttttctcttgtttgtctttagcaactaaggacacagcacc |
3185408 |
T |
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