View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10092A_low_238 (Length: 243)
Name: NF10092A_low_238
Description: NF10092A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10092A_low_238 |
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Alignment Details
Target: chr7 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 41429608 - 41429854
Alignment:
| Q |
1 |
atagaggtagatatgtatgacaatatttaaggtttgggcaaggaggtaattatagtactcatcatcat------------tctcattttcattctagaag |
88 |
Q |
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||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| |||||||||||| |
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| T |
41429608 |
atagaggtagatatgtatgacaatatttaaggtttggacaaggaggtaattatagtactcatcatcattctcattctcattctcattctcattctagaag |
41429707 |
T |
|
| Q |
89 |
gtagacagtattcgtatgtgggtggcagcttcaaatttgtacacatacatgtttgatacaaggtacatatacttgtacattacttactttaactgaaata |
188 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
41429708 |
gtagacagtattcgtatgtgggtggcagcttcaaatttgtacacatacatgtttgatacaaggtacatatacttgtacactacttactttaactgaaata |
41429807 |
T |
|
| Q |
189 |
aataggttagcaacaaatacaactgttacatcttcataatatttttc |
235 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41429808 |
aataggttagcaacaaatacaactgttacatcttcataatatttttc |
41429854 |
T |
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