View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10092A_low_248 (Length: 240)
Name: NF10092A_low_248
Description: NF10092A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10092A_low_248 |
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Alignment Details
Target: chr7 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 3185696 - 3185927
Alignment:
| Q |
1 |
aaggtgtggaaaatgaagtatggttgaatttaagtnnnnnnnntaagtatatcgtgaaagttatagagccaaagtcattaagttcttaagtaaggtaagc |
100 |
Q |
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| T |
3185696 |
aaggtgtggcaaatgaagtatggatgaatttaagtaaaaaaaataagtatatggtgaaagttatagagccaaagtcattaagttcttaagtaaggtaagc |
3185795 |
T |
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| Q |
101 |
tcataattaagttggttaatttttcacttttgaataaacaaaagacagccatgtatatataaatatgcaaggagatggaaataaagtaaggttgaagtta |
200 |
Q |
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| T |
3185796 |
tcataattaagttggttaatttttcacttttgaataaacaaaagacagccatgtatatataaatatgcaaggagatggaaataaagtaaggttgaagtta |
3185895 |
T |
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| Q |
201 |
agtaacaaaaaataataattttatgatgatgt |
232 |
Q |
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|||||||||||||||||||||||||| ||||| |
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| T |
3185896 |
agtaacaaaaaataataattttatgacgatgt |
3185927 |
T |
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