View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10092A_low_293 (Length: 230)

Name: NF10092A_low_293
Description: NF10092A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10092A_low_293
NF10092A_low_293
[»] chr7 (1 HSPs)
chr7 (1-172)||(21469557-21469730)


Alignment Details
Target: chr7 (Bit Score: 155; Significance: 2e-82; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 21469557 - 21469730
Alignment:
Q  1 attgtgagatttgaagtaatctttcttcattactttttcttttcttgcaaactatatcaaggaggatatttaaacctttatgatctcat--tatatatgt 98  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||  |||||||||    
T  21469557 attgtgagatttgaagtaatctttcttcattactttttcttttcttgcaaactatatcaaggaggatatataaacctttatgatctcattatatatatgt 21469656  T
Q  99 aagagtgcagttagctcaagtgccaagatatatcttaacttcctaaggggtttgatccatatactatttaaatc 172  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  21469657 aagagtgcagttagctcaagtgccaagatatatcttaacttcataaggggtttgatccatatactatttaaatc 21469730  T

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