View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10092A_low_305 (Length: 229)
Name: NF10092A_low_305
Description: NF10092A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10092A_low_305 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 41786315 - 41786543
Alignment:
| Q |
1 |
atggtggcacaataggcctgattaccaaagtgataggtggatctattctcgcagaaaaaacagttagaaatgtttacaaaa-gaaatacaaacacctgca |
99 |
Q |
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| T |
41786315 |
atggtggcacaataggcctgattaccaaagtgataggtggatctattatcgcagaaaaaacagttagaaatgtttacaaaaagaaatacaaacacctgca |
41786414 |
T |
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| Q |
100 |
atgcaagcaagactcaagagccactctttatgccttttacacattcgttaaatccaaatctgcaaaacagttttaatatttccaaataatggtttataga |
199 |
Q |
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| T |
41786415 |
acgcaagcaagactcaagagccactctttat-ccttttacacattcgttaaatccaaatctgcaaaacagttttaatatttccaaataatggtttataga |
41786513 |
T |
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| Q |
200 |
atagaatagtaatacttacaactaaagtga |
229 |
Q |
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| T |
41786514 |
atagaatagtaatacttacaactaaagtga |
41786543 |
T |
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