View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10092A_low_344 (Length: 216)

Name: NF10092A_low_344
Description: NF10092A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10092A_low_344
NF10092A_low_344
[»] chr4 (34 HSPs)
chr4 (29-96)||(56335552-56335619)
chr4 (157-195)||(4455060-4455098)
chr4 (154-195)||(45097164-45097205)
chr4 (157-195)||(15241480-15241518)
chr4 (154-195)||(45742805-45742846)
chr4 (156-195)||(4035824-4035863)
chr4 (164-195)||(4549888-4549919)
chr4 (157-195)||(5375556-5375594)
chr4 (157-195)||(9328239-9328277)
chr4 (55-112)||(16972780-16972838)
chr4 (157-195)||(30771528-30771566)
chr4 (157-195)||(32032992-32033030)
chr4 (157-195)||(34273218-34273256)
chr4 (157-195)||(44294789-44294827)
chr4 (164-198)||(46949999-46950033)
chr4 (157-195)||(47806860-47806898)
chr4 (157-195)||(52977982-52978020)
chr4 (157-194)||(5743659-5743696)
chr4 (154-195)||(6807426-6807467)
chr4 (64-97)||(27059422-27059455)
chr4 (157-194)||(30868801-30868838)
chr4 (157-194)||(33413518-33413555)
chr4 (154-195)||(36391851-36391892)
chr4 (164-193)||(37639888-37639917)
chr4 (154-195)||(48030310-48030351)
chr4 (154-195)||(49793088-49793129)
chr4 (162-195)||(55876385-55876418)
chr4 (154-195)||(56432515-56432556)
chr4 (155-195)||(17610019-17610059)
chr4 (154-190)||(20747434-20747470)
chr4 (157-193)||(26626003-26626039)
chr4 (155-191)||(30050087-30050123)
chr4 (66-98)||(38943150-38943182)
chr4 (157-193)||(49490169-49490205)
[»] chr5 (19 HSPs)
chr5 (155-195)||(16153254-16153294)
chr5 (156-195)||(3686753-3686792)
chr5 (156-195)||(15190814-15190853)
chr5 (154-195)||(16127256-16127297)
chr5 (155-190)||(3497538-3497573)
chr5 (156-195)||(6673227-6673266)
chr5 (156-195)||(14913647-14913686)
chr5 (156-195)||(22527691-22527730)
chr5 (156-195)||(26894872-26894911)
chr5 (156-195)||(40004408-40004447)
chr5 (157-195)||(1265949-1265987)
chr5 (157-195)||(9828393-9828431)
chr5 (156-190)||(16127523-16127557)
chr5 (153-194)||(8949808-8949849)
chr5 (154-191)||(9020691-9020728)
chr5 (156-193)||(34662203-34662240)
chr5 (157-193)||(7951562-7951598)
chr5 (155-191)||(24857554-24857590)
chr5 (155-191)||(31657683-31657719)
[»] chr3 (41 HSPs)
chr3 (150-198)||(37728706-37728754)
chr3 (156-195)||(20862195-20862234)
chr3 (156-195)||(26221287-26221326)
chr3 (157-195)||(36098966-36099004)
chr3 (154-195)||(12050391-12050432)
chr3 (154-195)||(25149121-25149162)
chr3 (155-195)||(22103928-22103968)
chr3 (34-113)||(30603444-30603524)
chr3 (155-195)||(44543780-44543820)
chr3 (155-195)||(51284061-51284101)
chr3 (155-194)||(7181348-7181387)
chr3 (156-195)||(22832606-22832645)
chr3 (156-195)||(32568996-32569035)
chr3 (156-195)||(35868082-35868121)
chr3 (156-195)||(43868102-43868141)
chr3 (157-195)||(9499496-9499534)
chr3 (157-195)||(10220933-10220971)
chr3 (157-195)||(21756486-21756524)
chr3 (157-195)||(26593764-26593802)
chr3 (157-195)||(30041016-30041054)
chr3 (157-195)||(45252773-45252811)
chr3 (164-198)||(47066941-47066975)
chr3 (157-191)||(53361594-53361628)
chr3 (166-195)||(1450251-1450280)
chr3 (157-194)||(14428610-14428647)
chr3 (154-195)||(24087334-24087375)
chr3 (157-194)||(46049986-46050023)
chr3 (162-195)||(46862365-46862398)
chr3 (157-193)||(4024052-4024088)
chr3 (155-195)||(4759350-4759390)
chr3 (155-195)||(7051719-7051759)
chr3 (154-190)||(14428873-14428909)
chr3 (151-195)||(25148453-25148497)
chr3 (155-195)||(26306606-26306646)
chr3 (151-195)||(28673293-28673337)
chr3 (34-97)||(29582893-29582957)
chr3 (155-195)||(41392879-41392919)
chr3 (155-191)||(45745776-45745812)
chr3 (167-195)||(52059244-52059272)
chr3 (146-190)||(53271855-53271899)
chr3 (155-195)||(53361854-53361894)
[»] chr1 (37 HSPs)
chr1 (155-195)||(41855472-41855512)
chr1 (157-198)||(46075863-46075904)
chr1 (154-190)||(7784258-7784294)
chr1 (155-195)||(11741395-11741435)
chr1 (155-191)||(16576095-16576131)
chr1 (155-195)||(18237092-18237132)
chr1 (155-195)||(37951948-37951988)
chr1 (155-195)||(39497431-39497471)
chr1 (155-195)||(50007973-50008013)
chr1 (156-195)||(4102713-4102752)
chr1 (164-195)||(5858262-5858293)
chr1 (164-195)||(9202504-9202535)
chr1 (155-190)||(30289600-30289635)
chr1 (64-126)||(42293642-42293704)
chr1 (156-195)||(45039411-45039450)
chr1 (155-190)||(47069052-47069087)
chr1 (156-195)||(52431173-52431212)
chr1 (157-195)||(943636-943674)
chr1 (157-195)||(1039380-1039418)
chr1 (157-195)||(1046286-1046324)
chr1 (164-198)||(13343780-13343814)
chr1 (156-190)||(15810971-15811005)
chr1 (157-195)||(15811231-15811269)
chr1 (157-195)||(23541979-23542017)
chr1 (157-195)||(36694854-36694892)
chr1 (157-195)||(36710955-36710993)
chr1 (157-195)||(39363193-39363231)
chr1 (157-195)||(44649629-44649667)
chr1 (164-194)||(45285810-45285840)
chr1 (157-195)||(49907021-49907059)
chr1 (157-194)||(897200-897237)
chr1 (150-195)||(14171535-14171580)
chr1 (158-195)||(30289861-30289898)
chr1 (157-194)||(30290265-30290302)
chr1 (166-195)||(37584963-37584992)
chr1 (155-195)||(7763748-7763788)
chr1 (154-190)||(35984399-35984435)
[»] chr8 (25 HSPs)
chr8 (155-190)||(4631291-4631326)
chr8 (152-195)||(36177102-36177145)
chr8 (156-195)||(43654202-43654241)
chr8 (157-195)||(8948350-8948388)
chr8 (157-198)||(7758905-7758946)
chr8 (155-195)||(5774046-5774086)
chr8 (155-195)||(13153926-13153966)
chr8 (155-195)||(28572044-28572084)
chr8 (155-195)||(28579637-28579677)
chr8 (155-195)||(34568488-34568528)
chr8 (155-194)||(4631555-4631594)
chr8 (156-195)||(5593420-5593459)
chr8 (156-195)||(8251932-8251971)
chr8 (156-195)||(18754143-18754182)
chr8 (157-195)||(51094-51132)
chr8 (157-195)||(1774342-1774380)
chr8 (157-195)||(2944271-2944309)
chr8 (157-195)||(8951427-8951465)
chr8 (157-195)||(28192174-28192212)
chr8 (156-194)||(32675757-32675795)
chr8 (164-194)||(37023284-37023314)
chr8 (164-194)||(38798329-38798359)
chr8 (157-194)||(39029178-39029215)
chr8 (155-191)||(35179598-35179634)
chr8 (154-190)||(44250856-44250892)
[»] chr7 (31 HSPs)
chr7 (156-195)||(34979076-34979115)
chr7 (157-195)||(25247689-25247727)
chr7 (66-112)||(35375788-35375834)
chr7 (154-195)||(6387322-6387363)
chr7 (155-195)||(32814431-32814471)
chr7 (155-195)||(33858865-33858905)
chr7 (160-195)||(11647833-11647868)
chr7 (155-194)||(12930316-12930355)
chr7 (164-195)||(18751981-18752012)
chr7 (156-195)||(29286036-29286075)
chr7 (156-195)||(36698130-36698169)
chr7 (156-195)||(38858297-38858336)
chr7 (155-194)||(39871613-39871652)
chr7 (157-191)||(2345546-2345580)
chr7 (149-195)||(7449262-7449308)
chr7 (157-195)||(19920563-19920601)
chr7 (157-195)||(21295151-21295189)
chr7 (157-195)||(26255096-26255134)
chr7 (157-195)||(28060717-28060755)
chr7 (156-198)||(29177248-29177290)
chr7 (157-195)||(32872374-32872412)
chr7 (157-195)||(39197718-39197756)
chr7 (157-195)||(41026095-41026133)
chr7 (157-195)||(41252360-41252398)
chr7 (157-195)||(48521029-48521067)
chr7 (157-198)||(20074889-20074930)
chr7 (154-195)||(31200363-31200404)
chr7 (154-195)||(36646636-36646677)
chr7 (64-96)||(5747896-5747928)
chr7 (155-195)||(34012516-34012556)
chr7 (157-193)||(40300230-40300266)
[»] chr2 (30 HSPs)
chr2 (156-195)||(34113530-34113569)
chr2 (156-195)||(40680726-40680765)
chr2 (153-195)||(13197644-13197686)
chr2 (154-195)||(11201680-11201721)
chr2 (154-195)||(34883847-34883888)
chr2 (164-195)||(11865288-11865319)
chr2 (156-195)||(20252209-20252248)
chr2 (164-195)||(26334844-26334875)
chr2 (156-195)||(34062664-34062703)
chr2 (156-195)||(41450515-41450554)
chr2 (156-190)||(1360055-1360089)
chr2 (157-195)||(2438225-2438263)
chr2 (157-195)||(7491844-7491882)
chr2 (157-195)||(8716891-8716929)
chr2 (155-189)||(8841395-8841429)
chr2 (157-195)||(16108474-16108512)
chr2 (157-195)||(17408293-17408331)
chr2 (157-195)||(36131027-36131065)
chr2 (156-194)||(40607701-40607739)
chr2 (154-195)||(1859544-1859585)
chr2 (157-190)||(17408034-17408067)
chr2 (154-195)||(22897388-22897429)
chr2 (154-191)||(24974064-24974101)
chr2 (154-195)||(25624730-25624771)
chr2 (157-194)||(27560206-27560243)
chr2 (157-190)||(29239333-29239366)
chr2 (155-195)||(5664636-5664676)
chr2 (155-195)||(15228148-15228188)
chr2 (155-195)||(19631188-19631228)
chr2 (155-195)||(19828089-19828129)
[»] scaffold0008 (1 HSPs)
scaffold0008 (149-195)||(259121-259167)
[»] chr6 (12 HSPs)
chr6 (155-195)||(7772174-7772214)
chr6 (156-195)||(4844399-4844438)
chr6 (156-195)||(30248646-30248685)
chr6 (157-195)||(231104-231142)
chr6 (157-195)||(1147266-1147304)
chr6 (157-195)||(8743188-8743226)
chr6 (157-195)||(34301831-34301869)
chr6 (154-195)||(34915542-34915583)
chr6 (155-195)||(15498627-15498667)
chr6 (155-195)||(19097800-19097840)
chr6 (155-195)||(25045642-25045682)
chr6 (154-194)||(25197149-25197189)
[»] scaffold0122 (1 HSPs)
scaffold0122 (156-195)||(12064-12103)
[»] scaffold0029 (1 HSPs)
scaffold0029 (156-195)||(51681-51720)
[»] scaffold0012 (1 HSPs)
scaffold0012 (156-195)||(47639-47678)
[»] scaffold0604 (1 HSPs)
scaffold0604 (157-195)||(3781-3819)
[»] scaffold0025 (1 HSPs)
scaffold0025 (154-195)||(65636-65677)


Alignment Details
Target: chr4 (Bit Score: 64; Significance: 4e-28; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 29 - 96
Target Start/End: Complemental strand, 56335619 - 56335552
Alignment:
Q  29 atgcgccgacaatttatgtgatttacgacgcacataacttctataaatttgtgtgtttggttcatttg 96  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  56335619 atgcgccgacaatttatgtgatttacaacgcacataacttctataaatttgtgtgtttggttcatttg 56335552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 157 - 195
Target Start/End: Original strand, 4455060 - 4455098
Alignment:
Q  157 tactccatccgtccctaattataagactcttttgagaat 195  Q
    |||||||||||||||||||||||||||||||||||||||    
T  4455060 tactccatccgtccctaattataagactcttttgagaat 4455098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 195
Target Start/End: Complemental strand, 45097205 - 45097164
Alignment:
Q  154 aaatactccatccgtccctaattataagactcttttgagaat 195  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  45097205 aaatactccatccgtccctaattataagacccttttgagaat 45097164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 157 - 195
Target Start/End: Original strand, 15241480 - 15241518
Alignment:
Q  157 tactccatccgtccctaattataagactcttttgagaat 195  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  15241480 tactccctccgtccctaattataagactcttttgagaat 15241518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 195
Target Start/End: Complemental strand, 45742846 - 45742805
Alignment:
Q  154 aaatactccatccgtccctaattataagactcttttgagaat 195  Q
    ||||||||| |||||||||||||||||||| |||||||||||    
T  45742846 aaatactccctccgtccctaattataagacccttttgagaat 45742805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 195
Target Start/End: Original strand, 4035824 - 4035863
Alignment:
Q  156 atactccatccgtccctaattataagactcttttgagaat 195  Q
    ||||||| |||||||||||||||||||| |||||||||||    
T  4035824 atactccctccgtccctaattataagacccttttgagaat 4035863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 195
Target Start/End: Complemental strand, 4549919 - 4549888
Alignment:
Q  164 tccgtccctaattataagactcttttgagaat 195  Q
    ||||||||||||||||||||||||||||||||    
T  4549919 tccgtccctaattataagactcttttgagaat 4549888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 195
Target Start/End: Complemental strand, 5375594 - 5375556
Alignment:
Q  157 tactccatccgtccctaattataagactcttttgagaat 195  Q
    |||||| |||||||||||||||||||| |||||||||||    
T  5375594 tactccctccgtccctaattataagacccttttgagaat 5375556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 195
Target Start/End: Complemental strand, 9328277 - 9328239
Alignment:
Q  157 tactccatccgtccctaattataagactcttttgagaat 195  Q
    |||||| |||||||||||||||||||| |||||||||||    
T  9328277 tactccctccgtccctaattataagacccttttgagaat 9328239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 112
Target Start/End: Complemental strand, 16972838 - 16972780
Alignment:
Q  55 gacgcacataa-cttctataaatttgtgtgtttggttcatttgcactccacaccacaaa 112  Q
    ||||||||||| ||| |||| ||| ||||||||||||||||||||  ||||||||||||    
T  16972838 gacgcacataaacttatatatattggtgtgtttggttcatttgcaaaccacaccacaaa 16972780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 195
Target Start/End: Original strand, 30771528 - 30771566
Alignment:
Q  157 tactccatccgtccctaattataagactcttttgagaat 195  Q
    |||||| |||||||||||||||||||| |||||||||||    
T  30771528 tactccctccgtccctaattataagacccttttgagaat 30771566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 195
Target Start/End: Complemental strand, 32033030 - 32032992
Alignment:
Q  157 tactccatccgtccctaattataagactcttttgagaat 195  Q
    |||||| |||||||||||||||||||| |||||||||||    
T  32033030 tactccctccgtccctaattataagacccttttgagaat 32032992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 195
Target Start/End: Complemental strand, 34273256 - 34273218
Alignment:
Q  157 tactccatccgtccctaattataagactcttttgagaat 195  Q
    |||||| |||||||||||||||||||| |||||||||||    
T  34273256 tactccctccgtccctaattataagacccttttgagaat 34273218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 195
Target Start/End: Original strand, 44294789 - 44294827
Alignment:
Q  157 tactccatccgtccctaattataagactcttttgagaat 195  Q
    |||||| |||||||||||||||||||| |||||||||||    
T  44294789 tactccctccgtccctaattataagacccttttgagaat 44294827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 198
Target Start/End: Original strand, 46949999 - 46950033
Alignment:
Q  164 tccgtccctaattataagactcttttgagaatatt 198  Q
    |||||||||||||||||||| ||||||||||||||    
T  46949999 tccgtccctaattataagacccttttgagaatatt 46950033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 195
Target Start/End: Original strand, 47806860 - 47806898
Alignment:
Q  157 tactccatccgtccctaattataagactcttttgagaat 195  Q
    |||||| |||||||||||||||||||| |||||||||||    
T  47806860 tactccctccgtccctaattataagacccttttgagaat 47806898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 195
Target Start/End: Original strand, 52977982 - 52978020
Alignment:
Q  157 tactccatccgtccctaattataagactcttttgagaat 195  Q
    |||||| |||||||||||||||||||| |||||||||||    
T  52977982 tactccctccgtccctaattataagacccttttgagaat 52978020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 157 - 194
Target Start/End: Complemental strand, 5743696 - 5743659
Alignment:
Q  157 tactccatccgtccctaattataagactcttttgagaa 194  Q
    |||||| |||||||||||||||||||| ||||||||||    
T  5743696 tactccctccgtccctaattataagacccttttgagaa 5743659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 154 - 195
Target Start/End: Original strand, 6807426 - 6807467
Alignment:
Q  154 aaatactccatccgtccctaattataagactcttttgagaat 195  Q
    ||||||||| || ||||||||||||||||| |||||||||||    
T  6807426 aaatactccctctgtccctaattataagacccttttgagaat 6807467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 64 - 97
Target Start/End: Original strand, 27059422 - 27059455
Alignment:
Q  64 aacttctataaatttgtgtgtttggttcatttgc 97  Q
    |||||||||||||| |||||||||||||||||||    
T  27059422 aacttctataaattggtgtgtttggttcatttgc 27059455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 157 - 194
Target Start/End: Complemental strand, 30868838 - 30868801
Alignment:
Q  157 tactccatccgtccctaattataagactcttttgagaa 194  Q
    |||| |||||||||||||||||||||| ||||||||||    
T  30868838 tactacatccgtccctaattataagacccttttgagaa 30868801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 157 - 194
Target Start/End: Original strand, 33413518 - 33413555
Alignment:
Q  157 tactccatccgtccctaattataagactcttttgagaa 194  Q
    |||||| |||||||||||||||||||| ||||||||||    
T  33413518 tactccctccgtccctaattataagacccttttgagaa 33413555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 154 - 195
Target Start/End: Original strand, 36391851 - 36391892
Alignment:
Q  154 aaatactccatccgtccctaattataagactcttttgagaat 195  Q
    ||||||||| ||||||| |||||||||||| |||||||||||    
T  36391851 aaatactccctccgtccttaattataagacccttttgagaat 36391892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 164 - 193
Target Start/End: Complemental strand, 37639917 - 37639888
Alignment:
Q  164 tccgtccctaattataagactcttttgaga 193  Q
    ||||||||||||||||||||||||||||||    
T  37639917 tccgtccctaattataagactcttttgaga 37639888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 154 - 195
Target Start/End: Original strand, 48030310 - 48030351
Alignment:
Q  154 aaatactccatccgtccctaattataagactcttttgagaat 195  Q
    ||||||||| ||| |||||||||||||||| |||||||||||    
T  48030310 aaatactccctccatccctaattataagacccttttgagaat 48030351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 154 - 195
Target Start/End: Original strand, 49793088 - 49793129
Alignment:
Q  154 aaatactccatccgtccctaattataagactcttttgagaat 195  Q
    ||||||| | |||||||||||||||||||| |||||||||||    
T  49793088 aaatactacctccgtccctaattataagacccttttgagaat 49793129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 162 - 195
Target Start/End: Original strand, 55876385 - 55876418
Alignment:
Q  162 catccgtccctaattataagactcttttgagaat 195  Q
    |||||||||||||||||||||| |||||||||||    
T  55876385 catccgtccctaattataagacccttttgagaat 55876418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 154 - 195
Target Start/End: Original strand, 56432515 - 56432556
Alignment:
Q  154 aaatactccatccgtccctaattataagactcttttgagaat 195  Q
    ||||||| | |||||||||||||||||||| |||||||||||    
T  56432515 aaatactacctccgtccctaattataagacccttttgagaat 56432556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 195
Target Start/End: Complemental strand, 17610059 - 17610019
Alignment:
Q  155 aatactccatccgtccctaattataagactcttttgagaat 195  Q
    |||||||| |||||||||||||||||||  |||||||||||    
T  17610059 aatactccctccgtccctaattataagatccttttgagaat 17610019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 190
Target Start/End: Complemental strand, 20747470 - 20747434
Alignment:
Q  154 aaatactccatccgtccctaattataagactcttttg 190  Q
    ||||||||| |||||||||||||||||||| ||||||    
T  20747470 aaatactccctccgtccctaattataagacccttttg 20747434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 193
Target Start/End: Complemental strand, 26626039 - 26626003
Alignment:
Q  157 tactccatccgtccctaattataagactcttttgaga 193  Q
    |||||| |||||||||||||||||||| |||||||||    
T  26626039 tactccctccgtccctaattataagacccttttgaga 26626003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 191
Target Start/End: Complemental strand, 30050123 - 30050087
Alignment:
Q  155 aatactccatccgtccctaattataagactcttttga 191  Q
    |||||| | ||||||||||||||||||||||||||||    
T  30050123 aatactacctccgtccctaattataagactcttttga 30050087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 98
Target Start/End: Complemental strand, 38943182 - 38943150
Alignment:
Q  66 cttctataaatttgtgtgtttggttcatttgca 98  Q
    |||||||||||| ||||||||||||||||||||    
T  38943182 cttctataaattggtgtgtttggttcatttgca 38943150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 193
Target Start/End: Complemental strand, 49490205 - 49490169
Alignment:
Q  157 tactccatccgtccctaattataagactcttttgaga 193  Q
    |||| ||||||||||||||||||||| ||||||||||    
T  49490205 tactacatccgtccctaattataagattcttttgaga 49490169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 37; Significance: 0.000000000005; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 155 - 195
Target Start/End: Complemental strand, 16153294 - 16153254
Alignment:
Q  155 aatactccatccgtccctaattataagactcttttgagaat 195  Q
    ||||||||||||||||||||||||||||| |||||||||||    
T  16153294 aatactccatccgtccctaattataagacccttttgagaat 16153254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 195
Target Start/End: Complemental strand, 3686792 - 3686753
Alignment:
Q  156 atactccatccgtccctaattataagactcttttgagaat 195  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  3686792 atactccttccgtccctaattataagactcttttgagaat 3686753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 195
Target Start/End: Complemental strand, 15190853 - 15190814
Alignment:
Q  156 atactccatccgtccctaattataagactcttttgagaat 195  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  15190853 atactccctccgtccctaattataagactcttttgagaat 15190814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 195
Target Start/End: Original strand, 16127256 - 16127297
Alignment:
Q  154 aaatactccatccgtccctaattataagactcttttgagaat 195  Q
    ||||||||| |||||||||||||||||||| |||||||||||    
T  16127256 aaatactccctccgtccctaattataagacccttttgagaat 16127297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 190
Target Start/End: Original strand, 3497538 - 3497573
Alignment:
Q  155 aatactccatccgtccctaattataagactcttttg 190  Q
    ||||||||||||||||||||||||||||| ||||||    
T  3497538 aatactccatccgtccctaattataagacccttttg 3497573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 195
Target Start/End: Complemental strand, 6673266 - 6673227
Alignment:
Q  156 atactccatccgtccctaattataagactcttttgagaat 195  Q
    ||||||| |||||||||||||||||||| |||||||||||    
T  6673266 atactccctccgtccctaattataagacccttttgagaat 6673227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 195
Target Start/End: Original strand, 14913647 - 14913686
Alignment:
Q  156 atactccatccgtccctaattataagactcttttgagaat 195  Q
    ||||||| |||||||||||||||||||| |||||||||||    
T  14913647 atactccctccgtccctaattataagacccttttgagaat 14913686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 195
Target Start/End: Original strand, 22527691 - 22527730
Alignment:
Q  156 atactccatccgtccctaattataagactcttttgagaat 195  Q
    ||||||| |||||||||||||||||||| |||||||||||    
T  22527691 atactccctccgtccctaattataagacccttttgagaat 22527730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 195
Target Start/End: Complemental strand, 26894911 - 26894872
Alignment:
Q  156 atactccatccgtccctaattataagactcttttgagaat 195  Q
    ||||||| |||||||||||||||||||| |||||||||||    
T  26894911 atactccctccgtccctaattataagacccttttgagaat 26894872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 195
Target Start/End: Complemental strand, 40004447 - 40004408
Alignment:
Q  156 atactccatccgtccctaattataagactcttttgagaat 195  Q
    ||||||| |||||||||||||||||||| |||||||||||    
T  40004447 atactccctccgtccctaattataagacccttttgagaat 40004408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 195
Target Start/End: Original strand, 1265949 - 1265987
Alignment:
Q  157 tactccatccgtccctaattataagactcttttgagaat 195  Q
    |||||| |||||||||||||||||||| |||||||||||    
T  1265949 tactccctccgtccctaattataagacccttttgagaat 1265987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 195
Target Start/End: Original strand, 9828393 - 9828431
Alignment:
Q  157 tactccatccgtccctaattataagactcttttgagaat 195  Q
    |||||| |||||||||||||||||||| |||||||||||    
T  9828393 tactccctccgtccctaattataagacccttttgagaat 9828431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 190
Target Start/End: Complemental strand, 16127557 - 16127523
Alignment:
Q  156 atactccatccgtccctaattataagactcttttg 190  Q
    |||||||||||||||||||||||||||| ||||||    
T  16127557 atactccatccgtccctaattataagacccttttg 16127523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 153 - 194
Target Start/End: Original strand, 8949808 - 8949849
Alignment:
Q  153 gaaatactccatccgtccctaattataagactcttttgagaa 194  Q
    |||||||| | |||||||||||||||||||| ||||||||||    
T  8949808 gaaatactacctccgtccctaattataagacccttttgagaa 8949849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 154 - 191
Target Start/End: Original strand, 9020691 - 9020728
Alignment:
Q  154 aaatactccatccgtccctaattataagactcttttga 191  Q
    ||||||||| |||||||||||||||||||| |||||||    
T  9020691 aaatactccctccgtccctaattataagacccttttga 9020728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 156 - 193
Target Start/End: Original strand, 34662203 - 34662240
Alignment:
Q  156 atactccatccgtccctaattataagactcttttgaga 193  Q
    ||||||| |||||||||||||||||||| |||||||||    
T  34662203 atactccctccgtccctaattataagacccttttgaga 34662240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 193
Target Start/End: Original strand, 7951562 - 7951598
Alignment:
Q  157 tactccatccgtccctaattataagactcttttgaga 193  Q
    |||||| |||||||||||||||||||| |||||||||    
T  7951562 tactccctccgtccctaattataagacccttttgaga 7951598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 191
Target Start/End: Original strand, 24857554 - 24857590
Alignment:
Q  155 aatactccatccgtccctaattataagactcttttga 191  Q
    |||||| | ||||||||||||||||||||||||||||    
T  24857554 aatactacctccgtccctaattataagactcttttga 24857590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 191
Target Start/End: Original strand, 31657683 - 31657719
Alignment:
Q  155 aatactccatccgtccctaattataagactcttttga 191  Q
    |||||| |||||||||||||||||||||| |||||||    
T  31657683 aatactacatccgtccctaattataagacccttttga 31657719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 37; Significance: 0.000000000005; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 150 - 198
Target Start/End: Original strand, 37728706 - 37728754
Alignment:
Q  150 taagaaatactccatccgtccctaattataagactcttttgagaatatt 198  Q
    |||| |||||||| |||||||||||||||||||| ||||||||||||||    
T  37728706 taagtaatactccctccgtccctaattataagacccttttgagaatatt 37728754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 195
Target Start/End: Original strand, 20862195 - 20862234
Alignment:
Q  156 atactccatccgtccctaattataagactcttttgagaat 195  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  20862195 atactccatccgtccctaattataagacccttttgagaat 20862234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 195
Target Start/End: Original strand, 26221287 - 26221326
Alignment:
Q  156 atactccatccgtccctaattataagactcttttgagaat 195  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  26221287 atactccctccgtccctaattataagactcttttgagaat 26221326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 157 - 195
Target Start/End: Original strand, 36098966 - 36099004
Alignment:
Q  157 tactccatccgtccctaattataagactcttttgagaat 195  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  36098966 tactccatccgtccctaattataagacccttttgagaat 36099004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 195
Target Start/End: Complemental strand, 12050432 - 12050391
Alignment:
Q  154 aaatactccatccgtccctaattataagactcttttgagaat 195  Q
    ||||||||| |||||||||||||||||||| |||||||||||    
T  12050432 aaatactccctccgtccctaattataagacccttttgagaat 12050391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 195
Target Start/End: Complemental strand, 25149162 - 25149121
Alignment:
Q  154 aaatactccatccgtccctaattataagactcttttgagaat 195  Q
    ||||||||| |||||||||||||||||||| |||||||||||    
T  25149162 aaatactccctccgtccctaattataagacccttttgagaat 25149121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 195
Target Start/End: Complemental strand, 22103968 - 22103928
Alignment:
Q  155 aatactccatccgtccctaattataagactcttttgagaat 195  Q
    |||||||| |||||||||||||||||||| |||||||||||    
T  22103968 aatactccctccgtccctaattataagacccttttgagaat 22103928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 113
Target Start/End: Original strand, 30603444 - 30603524
Alignment:
Q  34 ccgacaatttatgtgatttacgacgcacataa-cttctataaatttgtgtgtttggttcatttgcactccacaccacaaat 113  Q
    |||||||||| |||  || || |||||||||| |||||||||||| |||||||| ||||||||| | ||||||||| ||||    
T  30603444 ccgacaatttttgttgttcacaacgcacataaacttctataaattagtgtgttttgttcatttgtaatccacaccataaat 30603524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 195
Target Start/End: Original strand, 44543780 - 44543820
Alignment:
Q  155 aatactccatccgtccctaattataagactcttttgagaat 195  Q
    |||||||| |||||||||||||||||||| |||||||||||    
T  44543780 aatactccctccgtccctaattataagacccttttgagaat 44543820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 195
Target Start/End: Complemental strand, 51284101 - 51284061
Alignment:
Q  155 aatactccatccgtccctaattataagactcttttgagaat 195  Q
    |||||||| |||||||||||||||||||| |||||||||||    
T  51284101 aatactccctccgtccctaattataagacccttttgagaat 51284061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 194
Target Start/End: Original strand, 7181348 - 7181387
Alignment:
Q  155 aatactccatccgtccctaattataagactcttttgagaa 194  Q
    |||||||| |||||||||||||||||||| ||||||||||    
T  7181348 aatactccctccgtccctaattataagacccttttgagaa 7181387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 195
Target Start/End: Complemental strand, 22832645 - 22832606
Alignment:
Q  156 atactccatccgtccctaattataagactcttttgagaat 195  Q
    ||||||| |||||||||||||||||||| |||||||||||    
T  22832645 atactccttccgtccctaattataagacccttttgagaat 22832606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 195
Target Start/End: Original strand, 32568996 - 32569035
Alignment:
Q  156 atactccatccgtccctaattataagactcttttgagaat 195  Q
    ||||||||||||||||||||||||| || |||||||||||    
T  32568996 atactccatccgtccctaattataaaacccttttgagaat 32569035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 195
Target Start/End: Complemental strand, 35868121 - 35868082
Alignment:
Q  156 atactccatccgtccctaattataagactcttttgagaat 195  Q
    ||||||| |||||||||||||||||||| |||||||||||    
T  35868121 atactccctccgtccctaattataagacccttttgagaat 35868082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 195
Target Start/End: Original strand, 43868102 - 43868141
Alignment:
Q  156 atactccatccgtccctaattataagactcttttgagaat 195  Q
    ||||||| |||||||||||||||||||| |||||||||||    
T  43868102 atactccctccgtccctaattataagacccttttgagaat 43868141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 195
Target Start/End: Complemental strand, 9499534 - 9499496
Alignment:
Q  157 tactccatccgtccctaattataagactcttttgagaat 195  Q
    |||||| |||||||||||||||||||| |||||||||||    
T  9499534 tactccctccgtccctaattataagacccttttgagaat 9499496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 195
Target Start/End: Original strand, 10220933 - 10220971
Alignment:
Q  157 tactccatccgtccctaattataagactcttttgagaat 195  Q
    |||||| |||||||||||||||||||| |||||||||||    
T  10220933 tactccctccgtccctaattataagacccttttgagaat 10220971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 195
Target Start/End: Original strand, 21756486 - 21756524
Alignment:
Q  157 tactccatccgtccctaattataagactcttttgagaat 195  Q
    |||||| |||||||||||||||||||| |||||||||||    
T  21756486 tactccctccgtccctaattataagacccttttgagaat 21756524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 195
Target Start/End: Complemental strand, 26593802 - 26593764
Alignment:
Q  157 tactccatccgtccctaattataagactcttttgagaat 195  Q
    |||||| |||||||||||||||||||| |||||||||||    
T  26593802 tactccctccgtccctaattataagacccttttgagaat 26593764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 195
Target Start/End: Complemental strand, 30041054 - 30041016
Alignment:
Q  157 tactccatccgtccctaattataagactcttttgagaat 195  Q
    |||||| ||||| ||||||||||||||||||||||||||    
T  30041054 tactccctccgttcctaattataagactcttttgagaat 30041016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 195
Target Start/End: Original strand, 45252773 - 45252811
Alignment:
Q  157 tactccatccgtccctaattataagactcttttgagaat 195  Q
    |||||| |||||||||||||||||||| |||||||||||    
T  45252773 tactccctccgtccctaattataagacccttttgagaat 45252811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 198
Target Start/End: Original strand, 47066941 - 47066975
Alignment:
Q  164 tccgtccctaattataagactcttttgagaatatt 198  Q
    |||||||||||||||||||| ||||||||||||||    
T  47066941 tccgtccctaattataagacccttttgagaatatt 47066975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 191
Target Start/End: Original strand, 53361594 - 53361628
Alignment:
Q  157 tactccatccgtccctaattataagactcttttga 191  Q
    ||||||||||||||||||||||||||| |||||||    
T  53361594 tactccatccgtccctaattataagacccttttga 53361628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 195
Target Start/End: Original strand, 1450251 - 1450280
Alignment:
Q  166 cgtccctaattataagactcttttgagaat 195  Q
    ||||||||||||||||||||||||||||||    
T  1450251 cgtccctaattataagactcttttgagaat 1450280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 157 - 194
Target Start/End: Original strand, 14428610 - 14428647
Alignment:
Q  157 tactccatccgtccctaattataagactcttttgagaa 194  Q
    |||||| |||||||||||||||||||| ||||||||||    
T  14428610 tactccctccgtccctaattataagacccttttgagaa 14428647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 154 - 195
Target Start/End: Complemental strand, 24087375 - 24087334
Alignment:
Q  154 aaatactccatccgtccctaattataagactcttttgagaat 195  Q
    ||||||| | |||||||||||||||||||| |||||||||||    
T  24087375 aaatactacctccgtccctaattataagacccttttgagaat 24087334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 157 - 194
Target Start/End: Complemental strand, 46050023 - 46049986
Alignment:
Q  157 tactccatccgtccctaattataagactcttttgagaa 194  Q
    |||||| |||||||||||||||||||| ||||||||||    
T  46050023 tactccctccgtccctaattataagacccttttgagaa 46049986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 162 - 195
Target Start/End: Complemental strand, 46862398 - 46862365
Alignment:
Q  162 catccgtccctaattataagactcttttgagaat 195  Q
    |||||||||||||||||||||| |||||||||||    
T  46862398 catccgtccctaattataagacccttttgagaat 46862365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 193
Target Start/End: Original strand, 4024052 - 4024088
Alignment:
Q  157 tactccatccgtccctaattataagactcttttgaga 193  Q
    |||||| |||||||||||||||||||| |||||||||    
T  4024052 tactccctccgtccctaattataagacccttttgaga 4024088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 195
Target Start/End: Complemental strand, 4759390 - 4759350
Alignment:
Q  155 aatactccatccgtccctaattataagactcttttgagaat 195  Q
    |||||| | |||||||||||||||||||| |||||||||||    
T  4759390 aatactacctccgtccctaattataagacccttttgagaat 4759350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 195
Target Start/End: Complemental strand, 7051759 - 7051719
Alignment:
Q  155 aatactccatccgtccctaattataagactcttttgagaat 195  Q
    |||||||| |||||||||||||||||||  |||||||||||    
T  7051759 aatactccctccgtccctaattataagatccttttgagaat 7051719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 190
Target Start/End: Complemental strand, 14428909 - 14428873
Alignment:
Q  154 aaatactccatccgtccctaattataagactcttttg 190  Q
    ||||||||| |||||||||||||||||||| ||||||    
T  14428909 aaatactccctccgtccctaattataagacccttttg 14428873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 195
Target Start/End: Original strand, 25148453 - 25148497
Alignment:
Q  151 aagaaatactccatccgtccctaattataagactcttttgagaat 195  Q
    |||| ||||||  |||||||||||||||||||| |||||||||||    
T  25148453 aagatatactcattccgtccctaattataagacccttttgagaat 25148497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 195
Target Start/End: Complemental strand, 26306646 - 26306606
Alignment:
Q  155 aatactccatccgtccctaattataagactcttttgagaat 195  Q
    |||||||| ||||| |||||||||||||| |||||||||||    
T  26306646 aatactccctccgttcctaattataagacccttttgagaat 26306606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 195
Target Start/End: Complemental strand, 28673337 - 28673293
Alignment:
Q  151 aagaaatactccatccgtccctaattataagactcttttgagaat 195  Q
    |||||||||| | |||||||||||||||||||  |||||||||||    
T  28673337 aagaaatactacctccgtccctaattataagatccttttgagaat 28673293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 97
Target Start/End: Complemental strand, 29582957 - 29582893
Alignment:
Q  34 ccgacaatttatgtgatttacgacgcacat-aacttctataaatttgtgtgtttggttcatttgc 97  Q
    ||||||||| ||||| | |||||||||||| ||||||||||||||  |||| | |||||||||||    
T  29582957 ccgacaattcatgtggtctacgacgcacataaacttctataaattactgtgctcggttcatttgc 29582893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 195
Target Start/End: Complemental strand, 41392919 - 41392879
Alignment:
Q  155 aatactccatccgtccctaattataagactcttttgagaat 195  Q
    |||||| | |||||||||||||||||||| |||||||||||    
T  41392919 aatactacctccgtccctaattataagacccttttgagaat 41392879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 191
Target Start/End: Original strand, 45745776 - 45745812
Alignment:
Q  155 aatactccatccgtccctaattataagactcttttga 191  Q
    |||||||| |||||||| |||||||||||||||||||    
T  45745776 aatactccctccgtcccaaattataagactcttttga 45745812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Complemental strand, 52059272 - 52059244
Alignment:
Q  167 gtccctaattataagactcttttgagaat 195  Q
    |||||||||||||||||||||||||||||    
T  52059272 gtccctaattataagactcttttgagaat 52059244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 190
Target Start/End: Complemental strand, 53271899 - 53271855
Alignment:
Q  146 tagataagaaatactccatccgtccctaattataagactcttttg 190  Q
    ||||||| | ||||||| ||||||||||||||||||||| |||||    
T  53271899 tagataaaatatactccctccgtccctaattataagacttttttg 53271855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 195
Target Start/End: Complemental strand, 53361894 - 53361854
Alignment:
Q  155 aatactccatccgtccctaattataagactcttttgagaat 195  Q
    |||||||| ||||||||||||||||||||  ||||||||||    
T  53361894 aatactccctccgtccctaattataagaccattttgagaat 53361854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.000000000005; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 155 - 195
Target Start/End: Complemental strand, 41855512 - 41855472
Alignment:
Q  155 aatactccatccgtccctaattataagactcttttgagaat 195  Q
    ||||||||||||||||||||||||||||| |||||||||||    
T  41855512 aatactccatccgtccctaattataagacccttttgagaat 41855472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 198
Target Start/End: Complemental strand, 46075904 - 46075863
Alignment:
Q  157 tactccatccgtccctaattataagactcttttgagaatatt 198  Q
    |||||| |||||||||||||||||||| ||||||||||||||    
T  46075904 tactccctccgtccctaattataagacccttttgagaatatt 46075863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 190
Target Start/End: Complemental strand, 7784294 - 7784258
Alignment:
Q  154 aaatactccatccgtccctaattataagactcttttg 190  Q
    ||||||||| |||||||||||||||||||||||||||    
T  7784294 aaatactccctccgtccctaattataagactcttttg 7784258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 195
Target Start/End: Original strand, 11741395 - 11741435
Alignment:
Q  155 aatactccatccgtccctaattataagactcttttgagaat 195  Q
    |||||||| |||||||||||||||||||| |||||||||||    
T  11741395 aatactccctccgtccctaattataagacccttttgagaat 11741435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 191
Target Start/End: Complemental strand, 16576131 - 16576095
Alignment:
Q  155 aatactccatccgtccctaattataagactcttttga 191  Q
    |||||||| ||||||||||||||||||||||||||||    
T  16576131 aatactccctccgtccctaattataagactcttttga 16576095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 195
Target Start/End: Original strand, 18237092 - 18237132
Alignment:
Q  155 aatactccatccgtccctaattataagactcttttgagaat 195  Q
    |||||| | ||||||||||||||||||||||||||||||||    
T  18237092 aatactacctccgtccctaattataagactcttttgagaat 18237132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 195
Target Start/End: Complemental strand, 37951988 - 37951948
Alignment:
Q  155 aatactccatccgtccctaattataagactcttttgagaat 195  Q
    |||||||| |||||||||||||||||||| |||||||||||    
T  37951988 aatactccctccgtccctaattataagacccttttgagaat 37951948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 195
Target Start/End: Original strand, 39497431 - 39497471
Alignment:
Q  155 aatactccatccgtccctaattataagactcttttgagaat 195  Q
    |||||||| |||||||||||||||||||| |||||||||||    
T  39497431 aatactccctccgtccctaattataagacccttttgagaat 39497471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 195
Target Start/End: Original strand, 50007973 - 50008013
Alignment:
Q  155 aatactccatccgtccctaattataagactcttttgagaat 195  Q
    |||||||| || |||||||||||||||||||||||||||||    
T  50007973 aatactccctctgtccctaattataagactcttttgagaat 50008013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 195
Target Start/End: Complemental strand, 4102752 - 4102713
Alignment:
Q  156 atactccatccgtccctaattataagactcttttgagaat 195  Q
    ||||||| |||||||||||||||||||| |||||||||||    
T  4102752 atactccctccgtccctaattataagacccttttgagaat 4102713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 195
Target Start/End: Original strand, 5858262 - 5858293
Alignment:
Q  164 tccgtccctaattataagactcttttgagaat 195  Q
    ||||||||||||||||||||||||||||||||    
T  5858262 tccgtccctaattataagactcttttgagaat 5858293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 195
Target Start/End: Complemental strand, 9202535 - 9202504
Alignment:
Q  164 tccgtccctaattataagactcttttgagaat 195  Q
    ||||||||||||||||||||||||||||||||    
T  9202535 tccgtccctaattataagactcttttgagaat 9202504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 190
Target Start/End: Original strand, 30289600 - 30289635
Alignment:
Q  155 aatactccatccgtccctaattataagactcttttg 190  Q
    |||||||| |||||||||||||||||||||||||||    
T  30289600 aatactccctccgtccctaattataagactcttttg 30289635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 64 - 126
Target Start/End: Original strand, 42293642 - 42293704
Alignment:
Q  64 aacttctataaatttgtgtgtttggttcatttgcactccacaccac-aaatcatgaatacttat 126  Q
    |||||||||||||| |||||||||||||||||| |  ||||||||| |||||||||||| ||||    
T  42293642 aacttctataaattggtgtgtttggttcatttg-aaaccacaccacaaaatcatgaatatttat 42293704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 195
Target Start/End: Original strand, 45039411 - 45039450
Alignment:
Q  156 atactccatccgtccctaattataagactcttttgagaat 195  Q
    ||||||| |||||||||||||||||||| |||||||||||    
T  45039411 atactccctccgtccctaattataagacccttttgagaat 45039450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 190
Target Start/End: Complemental strand, 47069087 - 47069052
Alignment:
Q  155 aatactccatccgtccctaattataagactcttttg 190  Q
    ||||||||||||||||||||||||||||| ||||||    
T  47069087 aatactccatccgtccctaattataagacccttttg 47069052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 195
Target Start/End: Complemental strand, 52431212 - 52431173
Alignment:
Q  156 atactccatccgtccctaattataagactcttttgagaat 195  Q
    ||||||| |||||||||||||||||||| |||||||||||    
T  52431212 atactccctccgtccctaattataagacccttttgagaat 52431173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 195
Target Start/End: Complemental strand, 943674 - 943636
Alignment:
Q  157 tactccatccgtccctaattataagactcttttgagaat 195  Q
    |||||| |||||||||||||||||||| |||||||||||    
T  943674 tactccctccgtccctaattataagacccttttgagaat 943636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 195
Target Start/End: Complemental strand, 1039418 - 1039380
Alignment:
Q  157 tactccatccgtccctaattataagactcttttgagaat 195  Q
    |||||| |||||||||||||||||||| |||||||||||    
T  1039418 tactccctccgtccctaattataagacccttttgagaat 1039380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 195
Target Start/End: Complemental strand, 1046324 - 1046286
Alignment:
Q  157 tactccatccgtccctaattataagactcttttgagaat 195  Q
    |||||| |||||||||||||||||||| |||||||||||    
T  1046324 tactccctccgtccctaattataagacccttttgagaat 1046286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 198
Target Start/End: Original strand, 13343780 - 13343814
Alignment:
Q  164 tccgtccctaattataagactcttttgagaatatt 198  Q
    |||||||||||||||||||| ||||||||||||||    
T  13343780 tccgtccctaattataagacccttttgagaatatt 13343814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 190
Target Start/End: Original strand, 15810971 - 15811005
Alignment:
Q  156 atactccatccgtccctaattataagactcttttg 190  Q
    |||||||||||||||||||||||||||| ||||||    
T  15810971 atactccatccgtccctaattataagacccttttg 15811005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 195
Target Start/End: Complemental strand, 15811269 - 15811231
Alignment:
Q  157 tactccatccgtccctaattataagactcttttgagaat 195  Q
    |||||| |||||||||||||||||||| |||||||||||    
T  15811269 tactccctccgtccctaattataagacccttttgagaat 15811231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 195
Target Start/End: Original strand, 23541979 - 23542017
Alignment:
Q  157 tactccatccgtccctaattataagactcttttgagaat 195  Q
    |||||| |||||||||||||||||||| |||||||||||    
T  23541979 tactccctccgtccctaattataagacccttttgagaat 23542017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 195
Target Start/End: Original strand, 36694854 - 36694892
Alignment:
Q  157 tactccatccgtccctaattataagactcttttgagaat 195  Q
    |||||| |||||||||||||||||||| |||||||||||    
T  36694854 tactccctccgtccctaattataagacccttttgagaat 36694892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 195
Target Start/End: Original strand, 36710955 - 36710993
Alignment:
Q  157 tactccatccgtccctaattataagactcttttgagaat 195  Q
    |||||| |||||||||||||||||||| |||||||||||    
T  36710955 tactccctccgtccctaattataagacccttttgagaat 36710993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 195
Target Start/End: Complemental strand, 39363231 - 39363193
Alignment:
Q  157 tactccatccgtccctaattataagactcttttgagaat 195  Q
    |||||| |||||||||||||||||||| |||||||||||    
T  39363231 tactccctccgtccctaattataagacccttttgagaat 39363193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 195
Target Start/End: Original strand, 44649629 - 44649667
Alignment:
Q  157 tactccatccgtccctaattataagactcttttgagaat 195  Q
    |||||| |||||||||||||||||||| |||||||||||    
T  44649629 tactccctccgtccctaattataagacccttttgagaat 44649667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 194
Target Start/End: Complemental strand, 45285840 - 45285810
Alignment:
Q  164 tccgtccctaattataagactcttttgagaa 194  Q
    |||||||||||||||||||||||||||||||    
T  45285840 tccgtccctaattataagactcttttgagaa 45285810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 195
Target Start/End: Original strand, 49907021 - 49907059
Alignment:
Q  157 tactccatccgtccctaattataagactcttttgagaat 195  Q
    |||||| |||||||||||||||||||| |||||||||||    
T  49907021 tactccctccgtccctaattataagacccttttgagaat 49907059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 157 - 194
Target Start/End: Complemental strand, 897237 - 897200
Alignment:
Q  157 tactccatccgtccctaattataagactcttttgagaa 194  Q
    |||| ||||||| |||||||||||||||||||||||||    
T  897237 tactacatccgttcctaattataagactcttttgagaa 897200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 195
Target Start/End: Original strand, 14171535 - 14171580
Alignment:
Q  150 taagaaatactccatccgtccctaattataagactcttttgagaat 195  Q
    |||||| |||||| |||||| ||||||||||||| |||||||||||    
T  14171535 taagaattactccctccgtctctaattataagacccttttgagaat 14171580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 158 - 195
Target Start/End: Complemental strand, 30289898 - 30289861
Alignment:
Q  158 actccatccgtccctaattataagactcttttgagaat 195  Q
    ||||| |||||||||||||||||||| |||||||||||    
T  30289898 actccctccgtccctaattataagacccttttgagaat 30289861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 157 - 194
Target Start/End: Original strand, 30290265 - 30290302
Alignment:
Q  157 tactccatccgtccctaattataagactcttttgagaa 194  Q
    |||||| |||||||||||||||||||| ||||||||||    
T  30290265 tactccctccgtccctaattataagacccttttgagaa 30290302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 195
Target Start/End: Original strand, 37584963 - 37584992
Alignment:
Q  166 cgtccctaattataagactcttttgagaat 195  Q
    ||||||||||||||||||||||||||||||    
T  37584963 cgtccctaattataagactcttttgagaat 37584992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 195
Target Start/End: Complemental strand, 7763788 - 7763748
Alignment:
Q  155 aatactccatccgtccctaattataagactcttttgagaat 195  Q
    |||||| | |||||||||||||||||||| |||||||||||    
T  7763788 aatactacctccgtccctaattataagacccttttgagaat 7763748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 190
Target Start/End: Original strand, 35984399 - 35984435
Alignment:
Q  154 aaatactccatccgtccctaattataagactcttttg 190  Q
    ||||||||| |||||||||||||||||||| ||||||    
T  35984399 aaatactccttccgtccctaattataagacccttttg 35984435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 36; Significance: 0.00000000002; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 190
Target Start/End: Original strand, 4631291 - 4631326
Alignment:
Q  155 aatactccatccgtccctaattataagactcttttg 190  Q
    ||||||||||||||||||||||||||||||||||||    
T  4631291 aatactccatccgtccctaattataagactcttttg 4631326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 195
Target Start/End: Complemental strand, 36177145 - 36177102
Alignment:
Q  152 agaaatactccatccgtccctaattataagactcttttgagaat 195  Q
    |||| |||||| ||||||||||||||||||||||||||||||||    
T  36177145 agaattactccctccgtccctaattataagactcttttgagaat 36177102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 195
Target Start/End: Complemental strand, 43654241 - 43654202
Alignment:
Q  156 atactccatccgtccctaattataagactcttttgagaat 195  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  43654241 atactccctccgtccctaattataagactcttttgagaat 43654202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 157 - 195
Target Start/End: Complemental strand, 8948388 - 8948350
Alignment:
Q  157 tactccatccgtccctaattataagactcttttgagaat 195  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  8948388 tactccatccgtccctaattataagacccttttgagaat 8948350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 198
Target Start/End: Complemental strand, 7758946 - 7758905
Alignment:
Q  157 tactccatccgtccctaattataagactcttttgagaatatt 198  Q
    |||||| |||||||||||||||||||| ||||||||||||||    
T  7758946 tactccctccgtccctaattataagacacttttgagaatatt 7758905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 195
Target Start/End: Original strand, 5774046 - 5774086
Alignment:
Q  155 aatactccatccgtccctaattataagactcttttgagaat 195  Q
    |||||| | ||||||||||||||||||||||||||||||||    
T  5774046 aatactacctccgtccctaattataagactcttttgagaat 5774086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 195
Target Start/End: Original strand, 13153926 - 13153966
Alignment:
Q  155 aatactccatccgtccctaattataagactcttttgagaat 195  Q
    |||||||| |||||||||||||||||||| |||||||||||    
T  13153926 aatactccctccgtccctaattataagacccttttgagaat 13153966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 195
Target Start/End: Original strand, 28572044 - 28572084
Alignment:
Q  155 aatactccatccgtccctaattataagactcttttgagaat 195  Q
    |||||||| |||||||||||||||||||| |||||||||||    
T  28572044 aatactccctccgtccctaattataagacccttttgagaat 28572084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 195
Target Start/End: Original strand, 28579637 - 28579677
Alignment:
Q  155 aatactccatccgtccctaattataagactcttttgagaat 195  Q
    |||||||| |||||||||||||||||||| |||||||||||    
T  28579637 aatactccctccgtccctaattataagacccttttgagaat 28579677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 195
Target Start/End: Original strand, 34568488 - 34568528
Alignment:
Q  155 aatactccatccgtccctaattataagactcttttgagaat 195  Q
    |||||||| |||||||||||||||||||| |||||||||||    
T  34568488 aatactccctccgtccctaattataagacccttttgagaat 34568528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 194
Target Start/End: Complemental strand, 4631594 - 4631555
Alignment:
Q  155 aatactccatccgtccctaattataagactcttttgagaa 194  Q
    |||||||||||||||||||||||||||||  |||||||||    
T  4631594 aatactccatccgtccctaattataagaccattttgagaa 4631555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 195
Target Start/End: Original strand, 5593420 - 5593459
Alignment:
Q  156 atactccatccgtccctaattataagactcttttgagaat 195  Q
    ||||||| |||||||||||||||||||| |||||||||||    
T  5593420 atactccttccgtccctaattataagacccttttgagaat 5593459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 195
Target Start/End: Complemental strand, 8251971 - 8251932
Alignment:
Q  156 atactccatccgtccctaattataagactcttttgagaat 195  Q
    ||||||| |||||||||||||||||||| |||||||||||    
T  8251971 atactccctccgtccctaattataagacccttttgagaat 8251932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 195
Target Start/End: Original strand, 18754143 - 18754182
Alignment:
Q  156 atactccatccgtccctaattataagactcttttgagaat 195  Q
    ||||||| |||||||||||||||||||| |||||||||||    
T  18754143 atactccctccgtccctaattataagacccttttgagaat 18754182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 195
Target Start/End: Complemental strand, 51132 - 51094
Alignment:
Q  157 tactccatccgtccctaattataagactcttttgagaat 195  Q
    |||||| |||||||||||||||||||| |||||||||||    
T  51132 tactccctccgtccctaattataagacccttttgagaat 51094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 195
Target Start/End: Original strand, 1774342 - 1774380
Alignment:
Q  157 tactccatccgtccctaattataagactcttttgagaat 195  Q
    |||||| |||||||||||||||||||| |||||||||||    
T  1774342 tactccctccgtccctaattataagacccttttgagaat 1774380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 195
Target Start/End: Complemental strand, 2944309 - 2944271
Alignment:
Q  157 tactccatccgtccctaattataagactcttttgagaat 195  Q
    |||||| |||||||||||||||||||| |||||||||||    
T  2944309 tactccctccgtccctaattataagacccttttgagaat 2944271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 195
Target Start/End: Complemental strand, 8951465 - 8951427
Alignment:
Q  157 tactccatccgtccctaattataagactcttttgagaat 195  Q
    |||||| |||||||||||||||||||| |||||||||||    
T  8951465 tactccctccgtccctaattataagacccttttgagaat 8951427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 195
Target Start/End: Complemental strand, 28192212 - 28192174
Alignment:
Q  157 tactccatccgtccctaattataagactcttttgagaat 195  Q
    |||||| |||||||||||||||||||| |||||||||||    
T  28192212 tactccctccgtccctaattataagacccttttgagaat 28192174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 194
Target Start/End: Complemental strand, 32675795 - 32675757
Alignment:
Q  156 atactccatccgtccctaattataagactcttttgagaa 194  Q
    ||||||| |||||||||||||||||||| ||||||||||    
T  32675795 atactccctccgtccctaattataagacccttttgagaa 32675757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 194
Target Start/End: Complemental strand, 37023314 - 37023284
Alignment:
Q  164 tccgtccctaattataagactcttttgagaa 194  Q
    |||||||||||||||||||||||||||||||    
T  37023314 tccgtccctaattataagactcttttgagaa 37023284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 194
Target Start/End: Complemental strand, 38798359 - 38798329
Alignment:
Q  164 tccgtccctaattataagactcttttgagaa 194  Q
    |||||||||||||||||||||||||||||||    
T  38798359 tccgtccctaattataagactcttttgagaa 38798329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 157 - 194
Target Start/End: Original strand, 39029178 - 39029215
Alignment:
Q  157 tactccatccgtccctaattataagactcttttgagaa 194  Q
    |||||| |||||||||||||||||||| ||||||||||    
T  39029178 tactccctccgtccctaattataagacccttttgagaa 39029215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 191
Target Start/End: Original strand, 35179598 - 35179634
Alignment:
Q  155 aatactccatccgtccctaattataagactcttttga 191  Q
    |||||| | ||||||||||||||||||||||||||||    
T  35179598 aatactacctccgtccctaattataagactcttttga 35179634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 190
Target Start/End: Original strand, 44250856 - 44250892
Alignment:
Q  154 aaatactccatccgtccctaattataagactcttttg 190  Q
    ||||||||| |||||||||||||||||||| ||||||    
T  44250856 aaatactccctccgtccctaattataagacccttttg 44250892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 36; Significance: 0.00000000002; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 195
Target Start/End: Complemental strand, 34979115 - 34979076
Alignment:
Q  156 atactccatccgtccctaattataagactcttttgagaat 195  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  34979115 atactccctccgtccctaattataagactcttttgagaat 34979076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 157 - 195
Target Start/End: Complemental strand, 25247727 - 25247689
Alignment:
Q  157 tactccatccgtccctaattataagactcttttgagaat 195  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  25247727 tactccctccgtccctaattataagactcttttgagaat 25247689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 66 - 112
Target Start/End: Original strand, 35375788 - 35375834
Alignment:
Q  66 cttctataaatttgtgtgtttggttcatttgcactccacaccacaaa 112  Q
    |||||||||||||||||||||||||||||||||  ||||| ||||||    
T  35375788 cttctataaatttgtgtgtttggttcatttgcaaaccacatcacaaa 35375834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 195
Target Start/End: Original strand, 6387322 - 6387363
Alignment:
Q  154 aaatactccatccgtccctaattataagactcttttgagaat 195  Q
    ||||||||| |||||| |||||||||||||||||||||||||    
T  6387322 aaatactccctccgtctctaattataagactcttttgagaat 6387363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 195
Target Start/End: Original strand, 32814431 - 32814471
Alignment:
Q  155 aatactccatccgtccctaattataagactcttttgagaat 195  Q
    |||||||| |||||||||||||||||||| |||||||||||    
T  32814431 aatactccctccgtccctaattataagacccttttgagaat 32814471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 195
Target Start/End: Complemental strand, 33858905 - 33858865
Alignment:
Q  155 aatactccatccgtccctaattataagactcttttgagaat 195  Q
    |||||||| |||||||||||||||||||| |||||||||||    
T  33858905 aatactccctccgtccctaattataagacccttttgagaat 33858865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 195
Target Start/End: Complemental strand, 11647868 - 11647833
Alignment:
Q  160 tccatccgtccctaattataagactcttttgagaat 195  Q
    |||||||||||||||||||||||| |||||||||||    
T  11647868 tccatccgtccctaattataagacccttttgagaat 11647833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 194
Target Start/End: Original strand, 12930316 - 12930355
Alignment:
Q  155 aatactccatccgtccctaattataagactcttttgagaa 194  Q
    |||||| | |||||||||||||||||||||||||||||||    
T  12930316 aatactacctccgtccctaattataagactcttttgagaa 12930355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 195
Target Start/End: Complemental strand, 18752012 - 18751981
Alignment:
Q  164 tccgtccctaattataagactcttttgagaat 195  Q
    ||||||||||||||||||||||||||||||||    
T  18752012 tccgtccctaattataagactcttttgagaat 18751981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 195
Target Start/End: Complemental strand, 29286075 - 29286036
Alignment:
Q  156 atactccatccgtccctaattataagactcttttgagaat 195  Q
    ||||||| |||||||||||||||||||| |||||||||||    
T  29286075 atactccctccgtccctaattataagacccttttgagaat 29286036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 195
Target Start/End: Complemental strand, 36698169 - 36698130
Alignment:
Q  156 atactccatccgtccctaattataagactcttttgagaat 195  Q
    ||||||| |||||||||||||||||||| |||||||||||    
T  36698169 atactccctccgtccctaattataagacccttttgagaat 36698130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 195
Target Start/End: Original strand, 38858297 - 38858336
Alignment:
Q  156 atactccatccgtccctaattataagactcttttgagaat 195  Q
    ||||||| |||||||||||||||||||| |||||||||||    
T  38858297 atactccctccgtccctaattataagacccttttgagaat 38858336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 194
Target Start/End: Complemental strand, 39871652 - 39871613
Alignment:
Q  155 aatactccatccgtccctaattataagactcttttgagaa 194  Q
    |||||||| |||||||||||||||||||| ||||||||||    
T  39871652 aatactccctccgtccctaattataagacccttttgagaa 39871613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 191
Target Start/End: Complemental strand, 2345580 - 2345546
Alignment:
Q  157 tactccatccgtccctaattataagactcttttga 191  Q
    |||| ||||||||||||||||||||||||||||||    
T  2345580 tactacatccgtccctaattataagactcttttga 2345546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 195
Target Start/End: Original strand, 7449262 - 7449308
Alignment:
Q  149 ataagaaatactccatccgtccctaattataagactcttttgagaat 195  Q
    ||||||| |||||| ||||||||||||||||||||  ||||||||||    
T  7449262 ataagaagtactccctccgtccctaattataagaccattttgagaat 7449308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 195
Target Start/End: Original strand, 19920563 - 19920601
Alignment:
Q  157 tactccatccgtccctaattataagactcttttgagaat 195  Q
    |||||| |||||||||||||||||||| |||||||||||    
T  19920563 tactccctccgtccctaattataagacccttttgagaat 19920601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 195
Target Start/End: Original strand, 21295151 - 21295189
Alignment:
Q  157 tactccatccgtccctaattataagactcttttgagaat 195  Q
    |||||| |||||||||||||||||||| |||||||||||    
T  21295151 tactccctccgtccctaattataagacccttttgagaat 21295189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 195
Target Start/End: Original strand, 26255096 - 26255134
Alignment:
Q  157 tactccatccgtccctaattataagactcttttgagaat 195  Q
    |||||| |||||||||||||||||||| |||||||||||    
T  26255096 tactccctccgtccctaattataagacccttttgagaat 26255134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 195
Target Start/End: Original strand, 28060717 - 28060755
Alignment:
Q  157 tactccatccgtccctaattataagactcttttgagaat 195  Q
    |||||||||||||| |||||||||||| |||||||||||    
T  28060717 tactccatccgtccttaattataagacccttttgagaat 28060755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 198
Target Start/End: Complemental strand, 29177290 - 29177248
Alignment:
Q  156 atactccatccgtccctaattataagactcttttgagaatatt 198  Q
    ||||||| |||||||||||||||||||  ||||||||||||||    
T  29177290 atactccctccgtccctaattataagatccttttgagaatatt 29177248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 195
Target Start/End: Complemental strand, 32872412 - 32872374
Alignment:
Q  157 tactccatccgtccctaattataagactcttttgagaat 195  Q
    |||||| |||||||||||||||||||| |||||||||||    
T  32872412 tactccctccgtccctaattataagacccttttgagaat 32872374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 195
Target Start/End: Original strand, 39197718 - 39197756
Alignment:
Q  157 tactccatccgtccctaattataagactcttttgagaat 195  Q
    |||||| |||||||||||||||||||| |||||||||||    
T  39197718 tactccctccgtccctaattataagacccttttgagaat 39197756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 195
Target Start/End: Complemental strand, 41026133 - 41026095
Alignment:
Q  157 tactccatccgtccctaattataagactcttttgagaat 195  Q
    |||||| |||||||||||||||||||| |||||||||||    
T  41026133 tactccctccgtccctaattataagacccttttgagaat 41026095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 195
Target Start/End: Complemental strand, 41252398 - 41252360
Alignment:
Q  157 tactccatccgtccctaattataagactcttttgagaat 195  Q
    |||||| |||||||||||||||||||| |||||||||||    
T  41252398 tactccctccgtccctaattataagacccttttgagaat 41252360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 195
Target Start/End: Original strand, 48521029 - 48521067
Alignment:
Q  157 tactccatccgtccctaattataagactcttttgagaat 195  Q
    |||||| |||||||||||||||||||| |||||||||||    
T  48521029 tactccctccgtccctaattataagacccttttgagaat 48521067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 157 - 198
Target Start/End: Original strand, 20074889 - 20074930
Alignment:
Q  157 tactccatccgtccctaattataagactcttttgagaatatt 198  Q
    |||||| ||||||||||||||||| | |||||||||||||||    
T  20074889 tactccctccgtccctaattataatattcttttgagaatatt 20074930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 154 - 195
Target Start/End: Complemental strand, 31200404 - 31200363
Alignment:
Q  154 aaatactccatccgtccctaattataagactcttttgagaat 195  Q
    ||||||| ||||||| |||||||||||| |||||||||||||    
T  31200404 aaatacttcatccgttcctaattataagcctcttttgagaat 31200363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 154 - 195
Target Start/End: Complemental strand, 36646677 - 36646636
Alignment:
Q  154 aaatactccatccgtccctaattataagactcttttgagaat 195  Q
    ||||||||| |||||||||||||| ||||| |||||||||||    
T  36646677 aaatactccctccgtccctaattagaagacccttttgagaat 36646636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 96
Target Start/End: Original strand, 5747896 - 5747928
Alignment:
Q  64 aacttctataaatttgtgtgtttggttcatttg 96  Q
    |||||||||||||| ||||||||||||||||||    
T  5747896 aacttctataaattggtgtgtttggttcatttg 5747928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 195
Target Start/End: Complemental strand, 34012556 - 34012516
Alignment:
Q  155 aatactccatccgtccctaattataagactcttttgagaat 195  Q
    |||||| | |||||||||||||||||||| |||||||||||    
T  34012556 aatactacctccgtccctaattataagacccttttgagaat 34012516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 193
Target Start/End: Original strand, 40300230 - 40300266
Alignment:
Q  157 tactccatccgtccctaattataagactcttttgaga 193  Q
    |||||| |||||||||||||||||||| |||||||||    
T  40300230 tactccctccgtccctaattataagacccttttgaga 40300266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 36; Significance: 0.00000000002; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 195
Target Start/End: Original strand, 34113530 - 34113569
Alignment:
Q  156 atactccatccgtccctaattataagactcttttgagaat 195  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  34113530 atactccatccgtccctaattataagacccttttgagaat 34113569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 195
Target Start/End: Original strand, 40680726 - 40680765
Alignment:
Q  156 atactccatccgtccctaattataagactcttttgagaat 195  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  40680726 atactccatccgtccctaattataagacccttttgagaat 40680765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 153 - 195
Target Start/End: Complemental strand, 13197686 - 13197644
Alignment:
Q  153 gaaatactccatccgtccctaattataagactcttttgagaat 195  Q
    |||||||||| ||||||||||||||||||| ||||||||||||    
T  13197686 gaaatactccctccgtccctaattataagattcttttgagaat 13197644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 195
Target Start/End: Original strand, 11201680 - 11201721
Alignment:
Q  154 aaatactccatccgtccctaattataagactcttttgagaat 195  Q
    ||||||||| |||||||||||||||||||| |||||||||||    
T  11201680 aaatactccctccgtccctaattataagacccttttgagaat 11201721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 195
Target Start/End: Complemental strand, 34883888 - 34883847
Alignment:
Q  154 aaatactccatccgtccctaattataagactcttttgagaat 195  Q
    ||||||||| |||||||||||||||||||| |||||||||||    
T  34883888 aaatactccctccgtccctaattataagacccttttgagaat 34883847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 195
Target Start/End: Complemental strand, 11865319 - 11865288
Alignment:
Q  164 tccgtccctaattataagactcttttgagaat 195  Q
    ||||||||||||||||||||||||||||||||    
T  11865319 tccgtccctaattataagactcttttgagaat 11865288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 195
Target Start/End: Original strand, 20252209 - 20252248
Alignment:
Q  156 atactccatccgtccctaattataagactcttttgagaat 195  Q
    ||||||| |||||||||||||||||||| |||||||||||    
T  20252209 atactccctccgtccctaattataagacccttttgagaat 20252248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 195
Target Start/End: Complemental strand, 26334875 - 26334844
Alignment:
Q  164 tccgtccctaattataagactcttttgagaat 195  Q
    ||||||||||||||||||||||||||||||||    
T  26334875 tccgtccctaattataagactcttttgagaat 26334844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 195
Target Start/End: Complemental strand, 34062703 - 34062664
Alignment:
Q  156 atactccatccgtccctaattataagactcttttgagaat 195  Q
    ||||||| |||||||||||||||||||| |||||||||||    
T  34062703 atactccctccgtccctaattataagacccttttgagaat 34062664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 195
Target Start/End: Original strand, 41450515 - 41450554
Alignment:
Q  156 atactccatccgtccctaattataagactcttttgagaat 195  Q
    ||||||| |||||||||||||||||||| |||||||||||    
T  41450515 atactccctccgtccctaattataagacccttttgagaat 41450554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 190
Target Start/End: Complemental strand, 1360089 - 1360055
Alignment:
Q  156 atactccatccgtccctaattataagactcttttg 190  Q
    ||||||| |||||||||||||||||||||||||||    
T  1360089 atactccctccgtccctaattataagactcttttg 1360055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 195
Target Start/End: Original strand, 2438225 - 2438263
Alignment:
Q  157 tactccatccgtccctaattataagactcttttgagaat 195  Q
    |||||| |||||||||||||||||||| |||||||||||    
T  2438225 tactccctccgtccctaattataagacccttttgagaat 2438263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 195
Target Start/End: Original strand, 7491844 - 7491882
Alignment:
Q  157 tactccatccgtccctaattataagactcttttgagaat 195  Q
    |||||| |||||||||||||||||||| |||||||||||    
T  7491844 tactccctccgtccctaattataagacccttttgagaat 7491882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 195
Target Start/End: Complemental strand, 8716929 - 8716891
Alignment:
Q  157 tactccatccgtccctaattataagactcttttgagaat 195  Q
    |||||| |||||||||||||||||||| |||||||||||    
T  8716929 tactccctccgtccctaattataagacccttttgagaat 8716891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 189
Target Start/End: Original strand, 8841395 - 8841429
Alignment:
Q  155 aatactccatccgtccctaattataagactctttt 189  Q
    |||||||| ||||||||||||||||||||||||||    
T  8841395 aatactccctccgtccctaattataagactctttt 8841429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 195
Target Start/End: Complemental strand, 16108512 - 16108474
Alignment:
Q  157 tactccatccgtccctaattataagactcttttgagaat 195  Q
    |||||| ||||||||||||||||||| ||||||||||||    
T  16108512 tactccctccgtccctaattataagattcttttgagaat 16108474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 195
Target Start/End: Complemental strand, 17408331 - 17408293
Alignment:
Q  157 tactccatccgtccctaattataagactcttttgagaat 195  Q
    |||||| |||||||||||||||||||| |||||||||||    
T  17408331 tactccctccgtccctaattataagacccttttgagaat 17408293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 195
Target Start/End: Complemental strand, 36131065 - 36131027
Alignment:
Q  157 tactccatccgtccctaattataagactcttttgagaat 195  Q
    |||||| |||||||||||||||||||| |||||||||||    
T  36131065 tactccctccgtccctaattataagacccttttgagaat 36131027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 194
Target Start/End: Original strand, 40607701 - 40607739
Alignment:
Q  156 atactccatccgtccctaattataagactcttttgagaa 194  Q
    ||||||| |||||||||||||||||||| ||||||||||    
T  40607701 atactccctccgtccctaattataagacccttttgagaa 40607739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 154 - 195
Target Start/End: Original strand, 1859544 - 1859585
Alignment:
Q  154 aaatactccatccgtccctaattataagactcttttgagaat 195  Q
    ||||||| ||||||||| |||||||||||| |||||||||||    
T  1859544 aaatactacatccgtccttaattataagacccttttgagaat 1859585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 157 - 190
Target Start/End: Original strand, 17408034 - 17408067
Alignment:
Q  157 tactccatccgtccctaattataagactcttttg 190  Q
    ||||||||||||||||||||||||||| ||||||    
T  17408034 tactccatccgtccctaattataagacccttttg 17408067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 154 - 195
Target Start/End: Original strand, 22897388 - 22897429
Alignment:
Q  154 aaatactccatccgtccctaattataagactcttttgagaat 195  Q
    ||||||||| |||||||||||||||||||  |||||||||||    
T  22897388 aaatactccctccgtccctaattataagatccttttgagaat 22897429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 154 - 191
Target Start/End: Complemental strand, 24974101 - 24974064
Alignment:
Q  154 aaatactccatccgtccctaattataagactcttttga 191  Q
    ||||||| |||||||||||||||| |||||||||||||    
T  24974101 aaatactacatccgtccctaattacaagactcttttga 24974064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 154 - 195
Target Start/End: Original strand, 25624730 - 25624771
Alignment:
Q  154 aaatactccatccgtccctaattataagactcttttgagaat 195  Q
    ||||||||| ||||||||||||||||||||  ||||||||||    
T  25624730 aaatactccctccgtccctaattataagacctttttgagaat 25624771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 157 - 194
Target Start/End: Original strand, 27560206 - 27560243
Alignment:
Q  157 tactccatccgtccctaattataagactcttttgagaa 194  Q
    |||||| |||||||||||||||||||| ||||||||||    
T  27560206 tactccctccgtccctaattataagacccttttgagaa 27560243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 157 - 190
Target Start/End: Original strand, 29239333 - 29239366
Alignment:
Q  157 tactccatccgtccctaattataagactcttttg 190  Q
    |||||| |||||||||||||||||||||||||||    
T  29239333 tactccctccgtccctaattataagactcttttg 29239366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 195
Target Start/End: Original strand, 5664636 - 5664676
Alignment:
Q  155 aatactccatccgtccctaattataagactcttttgagaat 195  Q
    |||||||| ||||||||||||||||||||  ||||||||||    
T  5664636 aatactccctccgtccctaattataagacctttttgagaat 5664676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 195
Target Start/End: Complemental strand, 15228188 - 15228148
Alignment:
Q  155 aatactccatccgtccctaattataagactcttttgagaat 195  Q
    |||||||| |||||||||||||||||||  |||||||||||    
T  15228188 aatactccctccgtccctaattataagatccttttgagaat 15228148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 195
Target Start/End: Complemental strand, 19631228 - 19631188
Alignment:
Q  155 aatactccatccgtccctaattataagactcttttgagaat 195  Q
    |||||| |||| |||||||||||||||| ||||||||||||    
T  19631228 aatacttcatctgtccctaattataagattcttttgagaat 19631188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 195
Target Start/End: Complemental strand, 19828129 - 19828089
Alignment:
Q  155 aatactccatccgtccctaattataagactcttttgagaat 195  Q
    |||||| |||| |||||||||||||||| ||||||||||||    
T  19828129 aatacttcatctgtccctaattataagattcttttgagaat 19828089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 149 - 195
Target Start/End: Complemental strand, 259167 - 259121
Alignment:
Q  149 ataagaaatactccatccgtccctaattataagactcttttgagaat 195  Q
    |||| ||||||||| |||||||||||||||||||| |||||||||||    
T  259167 ataacaaatactccctccgtccctaattataagacccttttgagaat 259121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 33; Significance: 0.000000001; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 195
Target Start/End: Original strand, 7772174 - 7772214
Alignment:
Q  155 aatactccatccgtccctaattataagactcttttgagaat 195  Q
    |||||| | ||||||||||||||||||||||||||||||||    
T  7772174 aatactacctccgtccctaattataagactcttttgagaat 7772214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 195
Target Start/End: Original strand, 4844399 - 4844438
Alignment:
Q  156 atactccatccgtccctaattataagactcttttgagaat 195  Q
    ||||||| |||||||||||||||||||| |||||||||||    
T  4844399 atactccctccgtccctaattataagacccttttgagaat 4844438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 195
Target Start/End: Original strand, 30248646 - 30248685
Alignment:
Q  156 atactccatccgtccctaattataagactcttttgagaat 195  Q
    ||||||| |||||||||||||||||||| |||||||||||    
T  30248646 atactccctccgtccctaattataagacccttttgagaat 30248685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 195
Target Start/End: Complemental strand, 231142 - 231104
Alignment:
Q  157 tactccatccgtccctaattataagactcttttgagaat 195  Q
    |||||| |||||||||||||||||||| |||||||||||    
T  231142 tactccctccgtccctaattataagacccttttgagaat 231104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 195
Target Start/End: Complemental strand, 1147304 - 1147266
Alignment:
Q  157 tactccatccgtccctaattataagactcttttgagaat 195  Q
    ||||||||||||||||||||||||||| ||||| |||||    
T  1147304 tactccatccgtccctaattataagacccttttaagaat 1147266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 195
Target Start/End: Original strand, 8743188 - 8743226
Alignment:
Q  157 tactccatccgtccctaattataagactcttttgagaat 195  Q
    |||||| |||||||||||||||||||| |||||||||||    
T  8743188 tactccctccgtccctaattataagacccttttgagaat 8743226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 195
Target Start/End: Complemental strand, 34301869 - 34301831
Alignment:
Q  157 tactccatccgtccctaattataagactcttttgagaat 195  Q
    |||||| |||||||||||||||||||| |||||||||||    
T  34301869 tactccctccgtccctaattataagacccttttgagaat 34301831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 154 - 195
Target Start/End: Complemental strand, 34915583 - 34915542
Alignment:
Q  154 aaatactccatccgtccctaattataagactcttttgagaat 195  Q
    ||||||| | |||||||||||||||||||| |||||||||||    
T  34915583 aaatactacctccgtccctaattataagacccttttgagaat 34915542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 195
Target Start/End: Original strand, 15498627 - 15498667
Alignment:
Q  155 aatactccatccgtccctaattataagactcttttgagaat 195  Q
    |||||| | |||||||||||||||||||| |||||||||||    
T  15498627 aatactacctccgtccctaattataagacccttttgagaat 15498667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 195
Target Start/End: Complemental strand, 19097840 - 19097800
Alignment:
Q  155 aatactccatccgtccctaattataagactcttttgagaat 195  Q
    |||||||| |||||| ||||||||||||| |||||||||||    
T  19097840 aatactccctccgtctctaattataagacccttttgagaat 19097800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 195
Target Start/End: Complemental strand, 25045682 - 25045642
Alignment:
Q  155 aatactccatccgtccctaattataagactcttttgagaat 195  Q
    |||||| | |||||||||||||||||||| |||||||||||    
T  25045682 aatactacctccgtccctaattataagacccttttgagaat 25045642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 194
Target Start/End: Original strand, 25197149 - 25197189
Alignment:
Q  154 aaatactccatccgtccctaattataagactcttttgagaa 194  Q
    ||||||||| |||||||||||||||||||  ||||||||||    
T  25197149 aaatactccctccgtccctaattataagatccttttgagaa 25197189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 195
Target Start/End: Original strand, 12064 - 12103
Alignment:
Q  156 atactccatccgtccctaattataagactcttttgagaat 195  Q
    ||||||| |||||||||||||||||||| |||||||||||    
T  12064 atactccctccgtccctaattataagacccttttgagaat 12103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 195
Target Start/End: Complemental strand, 51720 - 51681
Alignment:
Q  156 atactccatccgtccctaattataagactcttttgagaat 195  Q
    ||||||| |||||||||||||||||||| |||||||||||    
T  51720 atactccctccgtccctaattataagacccttttgagaat 51681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 195
Target Start/End: Original strand, 47639 - 47678
Alignment:
Q  156 atactccatccgtccctaattataagactcttttgagaat 195  Q
    ||||||| |||||||||||||||||||| |||||||||||    
T  47639 atactccctccgtccctaattataagacccttttgagaat 47678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0604 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0604
Description:

Target: scaffold0604; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 195
Target Start/End: Complemental strand, 3819 - 3781
Alignment:
Q  157 tactccatccgtccctaattataagactcttttgagaat 195  Q
    |||||| |||||||||||||||||||| |||||||||||    
T  3819 tactccctccgtccctaattataagacccttttgagaat 3781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 154 - 195
Target Start/End: Complemental strand, 65677 - 65636
Alignment:
Q  154 aaatactccatccgtccctaattataagactcttttgagaat 195  Q
    ||||||||| ||||||||||||||||||||  ||||||||||    
T  65677 aaatactccctccgtccctaattataagacctttttgagaat 65636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University