View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10092A_low_355 (Length: 213)
Name: NF10092A_low_355
Description: NF10092A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10092A_low_355 |
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Alignment Details
Target: chr2 (Bit Score: 127; Significance: 9e-66; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 29 - 194
Target Start/End: Complemental strand, 41387141 - 41386973
Alignment:
| Q |
29 |
agaccagtggctgaatatcctccgcgcctgccattgcctttcaaaatctgcacaaaccatacattccttctcactgcattgaaagacaacaccaagtgca |
128 |
Q |
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| T |
41387141 |
agaccagtggctgaatatcctcggcgtctgccattgtctttcaaaatctgcacaaaccatacattccttctcagtgcattgaaagacaacaccaagtgca |
41387042 |
T |
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| Q |
129 |
attccaaacaattt---taaaaagaacatgttaaattttctcaccattacttattacatctatttctac |
194 |
Q |
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| T |
41387041 |
attccaaacaatttaaaaaaaaaaaacatcttaaattttctcaccattacttattacatctatttctac |
41386973 |
T |
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