View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10093_high_6 (Length: 255)
Name: NF10093_high_6
Description: NF10093
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10093_high_6 |
 | |
|
Alignment Details
Target: chr8 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 7 - 224
Target Start/End: Complemental strand, 23235189 - 23234972
Alignment:
| Q |
7 |
acactttcaggaacaccatagcagaggtgagcgaataattttccacttctattcttgttaatgatagtgttgttcaggcatgtcctataggatcccctac |
106 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
23235189 |
acactttcaggaacaccatagcagaggtgagcgaataattttccacttctattcttgttaatgatagtgttgttcaggcatgtcctataggataccctac |
23235090 |
T |
|
| Q |
107 |
atataattaatataagaaaaacacataataaaaaagggagtcatatgattttttatgctaaattatataataaatgcatttcactagcacgtgaaacaat |
206 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
23235089 |
atataattaatataagaaaaacacataataaaaaagggagtcatatgattttttatgctaaattatataataaatgcatttcacaagcacgtgaaacaat |
23234990 |
T |
|
| Q |
207 |
ctattatgatacatattt |
224 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
23234989 |
ctattatgatacatattt |
23234972 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University