View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10094_high_5 (Length: 209)
Name: NF10094_high_5
Description: NF10094
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10094_high_5 |
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Alignment Details
Target: chr5 (Bit Score: 86; Significance: 3e-41; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 96 - 185
Target Start/End: Original strand, 25487228 - 25487317
Alignment:
| Q |
96 |
tgggatagagaggtaagtggcagacgtgagagaaatgaagagttggagaaggagatctgttaatagaacacacttgaaaagggttgtcta |
185 |
Q |
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| T |
25487228 |
tgggatagagaggtaagtggcagacgtgagagaaatgaagagttggagaaggaggtctgttaatagaacacacttgaaaagggttgtcta |
25487317 |
T |
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Target: chr5; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 25487112 - 25487166
Alignment:
| Q |
12 |
aagcagagaaaaaggtttgggaacaaaccgatacataaaaatagaaatgaatagg |
66 |
Q |
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| T |
25487112 |
aagcagagaaaaaggtttgggaacaaaccgatacataaaaatggaaatgaatagg |
25487166 |
T |
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