View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10095_low_3 (Length: 302)
Name: NF10095_low_3
Description: NF10095
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10095_low_3 |
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Alignment Details
Target: chr8 (Bit Score: 267; Significance: 1e-149; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 1 - 287
Target Start/End: Complemental strand, 45520841 - 45520555
Alignment:
| Q |
1 |
catacaggtggcctcttaggattggatgaaaaggtcgatcagatgggttcctttgaagggaattggcaacgaatggatgttaatgaatctgttcccaggc |
100 |
Q |
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| T |
45520841 |
catacaggtggcctcttaggattgtatgacaaggtcgatcagctgggttcctttgtagggaattggcaacgaatggatgttaatgaatctgttcccaggc |
45520742 |
T |
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| Q |
101 |
aagatggaattggaaagatgttctagagaaagaaagtaaaacccttattgtttgcatttatgtctgtataaatatatcttgctccaaataagttatactt |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
45520741 |
aagatggaattggaaagatgttctagagaaagaaagtaaaacccttattgtttgcatgtatgtctgtataaatatatcttgctccaaataagttatactt |
45520642 |
T |
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| Q |
201 |
ttattgcagtgcttacacactgaatcctgatgttgacataatgataataaaaatgcccaaaaagaaaacgacgtctagggtggagat |
287 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45520641 |
ttattgcagtgcttacacactgaatcctgatgttgacataatgataataaaaatgcccaaaaagaaaacgacgtctagggtggagat |
45520555 |
T |
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