View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10098_high_12 (Length: 245)
Name: NF10098_high_12
Description: NF10098
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10098_high_12 |
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Alignment Details
Target: chr3 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 2 - 242
Target Start/End: Complemental strand, 45655646 - 45655401
Alignment:
| Q |
2 |
aattaataacatctccatgaaatcaaaatatcttcattgcataatttcaaataattagcaaggtactg-----tatcctaagaaagcaataaatatatca |
96 |
Q |
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| T |
45655646 |
aattaataacatctccatgaaatcaaaatatcttcattgcataatttcaaataattagcaaggtactgaactgtatcctaagaaagcaataaacatatca |
45655547 |
T |
|
| Q |
97 |
atattagtgatagttgcattttcgttggttacttcgtaatgacatgtgtatgtagcctatctgataatttcttctttatctttactatatgggggattaa |
196 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45655546 |
atattagtgatagttgcattttcgttggttacttcgtaatgacatgtgtatgcagcctatctgataatttcttctttatctttactatatgggggattaa |
45655447 |
T |
|
| Q |
197 |
gaataagagaaattctaggggatgttccatatattttgtctgtgct |
242 |
Q |
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||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
45655446 |
gaataagagaaattctaggggatgttccatatattttgtttgtgct |
45655401 |
T |
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