View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10098_low_14 (Length: 401)

Name: NF10098_low_14
Description: NF10098
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10098_low_14
NF10098_low_14
[»] chr5 (34 HSPs)
chr5 (16-383)||(11160722-11161093)
chr5 (272-389)||(10927438-10927555)
chr5 (272-389)||(10926981-10927098)
chr5 (273-383)||(20039515-20039625)
chr5 (272-389)||(17445490-17445607)
chr5 (287-389)||(2193825-2193927)
chr5 (287-389)||(1821915-1822017)
chr5 (272-389)||(27646870-27646987)
chr5 (272-389)||(34867784-34867901)
chr5 (272-389)||(21886181-21886298)
chr5 (272-389)||(39146933-39147050)
chr5 (272-389)||(42788681-42788798)
chr5 (277-389)||(2473958-2474070)
chr5 (277-389)||(22556535-22556647)
chr5 (277-382)||(189067-189172)
chr5 (288-389)||(8642069-8642170)
chr5 (220-389)||(15513047-15513220)
chr5 (273-389)||(8391357-8391472)
chr5 (277-389)||(22556968-22557080)
chr5 (277-389)||(3886636-3886748)
chr5 (287-383)||(18304440-18304536)
chr5 (273-383)||(2058697-2058807)
chr5 (323-389)||(34372113-34372179)
chr5 (292-389)||(18750231-18750328)
chr5 (277-389)||(2474404-2474516)
chr5 (277-389)||(3887092-3887204)
chr5 (278-389)||(24182280-24182391)
chr5 (327-389)||(34371661-34371723)
chr5 (273-389)||(30719840-30719956)
chr5 (289-380)||(16370752-16370843)
chr5 (288-349)||(29680175-29680236)
chr5 (273-389)||(30684591-30684707)
chr5 (272-383)||(42429140-42429250)
chr5 (277-358)||(22975076-22975157)
[»] chr2 (34 HSPs)
chr2 (272-389)||(18098913-18099030)
chr2 (275-389)||(33174955-33175069)
chr2 (273-389)||(1953150-1953266)
chr2 (287-389)||(8256535-8256637)
chr2 (272-389)||(33174499-33174614)
chr2 (276-389)||(29804680-29804793)
chr2 (277-389)||(30966233-30966345)
chr2 (272-389)||(1912519-1912636)
chr2 (272-389)||(11388183-11388298)
chr2 (259-389)||(16379374-16379504)
chr2 (287-389)||(25338032-25338134)
chr2 (287-389)||(41754298-41754400)
chr2 (272-389)||(1707036-1707152)
chr2 (277-389)||(5399852-5399964)
chr2 (310-382)||(16542017-16542089)
chr2 (272-388)||(18447954-18448070)
chr2 (277-389)||(30966689-30966801)
chr2 (278-383)||(38898953-38899058)
chr2 (309-389)||(11394566-11394645)
chr2 (277-388)||(24818325-24818436)
chr2 (283-389)||(8073897-8074003)
chr2 (287-389)||(30963755-30963857)
chr2 (289-382)||(83028-83121)
chr2 (272-383)||(25434097-25434208)
chr2 (288-381)||(15619908-15620001)
chr2 (277-389)||(29259655-29259767)
chr2 (330-389)||(33771053-33771112)
chr2 (287-389)||(16378946-16379048)
chr2 (288-381)||(9909102-9909195)
chr2 (327-388)||(20502072-20502133)
chr2 (327-388)||(30963299-30963360)
chr2 (289-389)||(27882961-27883061)
chr2 (329-381)||(8181394-8181446)
chr2 (314-389)||(13191010-13191085)
[»] chr1 (36 HSPs)
chr1 (272-389)||(43057558-43057675)
chr1 (272-389)||(50002320-50002437)
chr1 (272-389)||(52250200-52250317)
chr1 (277-389)||(35760949-35761061)
chr1 (275-389)||(50002742-50002856)
chr1 (272-389)||(20054115-20054232)
chr1 (272-389)||(20054571-20054688)
chr1 (272-389)||(20055027-20055144)
chr1 (272-389)||(20055483-20055600)
chr1 (272-389)||(20055939-20056056)
chr1 (272-389)||(20056395-20056512)
chr1 (272-389)||(20057298-20057415)
chr1 (288-389)||(20061226-20061327)
chr1 (277-389)||(35759643-35759755)
chr1 (272-391)||(38340900-38341019)
chr1 (277-383)||(7548090-7548196)
chr1 (220-389)||(50003110-50003282)
chr1 (276-389)||(16451968-16452081)
chr1 (276-389)||(16461121-16461234)
chr1 (272-389)||(20845696-20845813)
chr1 (277-382)||(23180729-23180834)
chr1 (288-389)||(31822698-31822799)
chr1 (272-389)||(43057100-43057216)
chr1 (277-389)||(2328314-2328426)
chr1 (289-389)||(20057754-20057854)
chr1 (276-389)||(2634922-2635035)
chr1 (272-389)||(30872985-30873102)
chr1 (328-389)||(46693770-46693831)
chr1 (270-381)||(10820584-10820695)
chr1 (314-381)||(16907270-16907337)
chr1 (330-389)||(20056851-20056910)
chr1 (273-389)||(12727986-12728103)
chr1 (333-389)||(20060375-20060431)
chr1 (328-388)||(51372910-51372970)
chr1 (272-383)||(12883518-12883629)
chr1 (284-383)||(842974-843073)
[»] chr7 (38 HSPs)
chr7 (277-389)||(6747633-6747745)
chr7 (272-389)||(6719109-6719226)
chr7 (272-389)||(42515538-42515655)
chr7 (276-389)||(28495852-28495965)
chr7 (272-378)||(26957603-26957709)
chr7 (273-389)||(29039055-29039171)
chr7 (287-389)||(35474156-35474258)
chr7 (287-389)||(36422261-36422363)
chr7 (277-383)||(42515091-42515197)
chr7 (272-389)||(2193250-2193367)
chr7 (272-389)||(2611687-2611804)
chr7 (276-389)||(28495643-28495756)
chr7 (272-389)||(34405626-34405743)
chr7 (288-383)||(679827-679921)
chr7 (287-389)||(13125171-13125273)
chr7 (275-389)||(46425738-46425852)
chr7 (288-389)||(2941792-2941893)
chr7 (277-389)||(9124958-9125070)
chr7 (272-388)||(43233407-43233523)
chr7 (323-389)||(2465778-2465844)
chr7 (311-389)||(2465957-2466035)
chr7 (277-383)||(11517430-11517535)
chr7 (288-389)||(22529270-22529371)
chr7 (284-368)||(13124757-13124841)
chr7 (277-388)||(5406624-5406735)
chr7 (272-389)||(2189138-2189255)
chr7 (316-381)||(25182399-25182464)
chr7 (288-389)||(29357491-29357592)
chr7 (309-370)||(16811900-16811961)
chr7 (316-389)||(36015446-36015519)
chr7 (277-389)||(18833285-18833397)
chr7 (289-389)||(31743859-31743959)
chr7 (272-362)||(3305374-3305464)
chr7 (329-383)||(35527162-35527216)
chr7 (311-368)||(11372484-11372541)
chr7 (283-389)||(1628721-1628824)
chr7 (273-389)||(9623203-9623319)
chr7 (328-383)||(26421346-26421401)
[»] chr8 (36 HSPs)
chr8 (276-383)||(6464951-6465058)
chr8 (272-383)||(2044052-2044163)
chr8 (272-383)||(8080383-8080494)
chr8 (273-389)||(27819281-27819397)
chr8 (275-388)||(27022374-27022487)
chr8 (272-389)||(41659140-41659257)
chr8 (287-389)||(12827289-12827391)
chr8 (272-389)||(10844877-10844994)
chr8 (272-389)||(22026373-22026490)
chr8 (287-388)||(22705181-22705282)
chr8 (288-389)||(27021914-27022015)
chr8 (272-389)||(27925893-27926010)
chr8 (289-389)||(28375089-28375189)
chr8 (310-389)||(25147568-25147647)
chr8 (272-389)||(22549030-22549147)
chr8 (277-389)||(22840564-22840676)
chr8 (277-389)||(34308514-34308626)
chr8 (287-389)||(10844650-10844752)
chr8 (287-389)||(17103090-17103192)
chr8 (287-389)||(22548584-22548686)
chr8 (288-389)||(25144782-25144883)
chr8 (272-389)||(32292391-32292508)
chr8 (314-389)||(12100727-12100802)
chr8 (288-383)||(25147977-25148072)
chr8 (314-389)||(41913006-41913081)
chr8 (287-389)||(28453347-28453449)
chr8 (277-370)||(34308993-34309086)
chr8 (256-375)||(29971450-29971569)
chr8 (288-382)||(33852300-33852394)
chr8 (307-383)||(3744667-3744743)
chr8 (314-381)||(1297043-1297110)
chr8 (329-388)||(15568041-15568100)
chr8 (326-389)||(15819050-15819113)
chr8 (338-388)||(6466770-6466820)
chr8 (342-383)||(21316150-21316191)
chr8 (273-321)||(44041885-44041933)
[»] chr6 (40 HSPs)
chr6 (275-389)||(20896723-20896837)
chr6 (220-389)||(23986352-23986524)
chr6 (273-388)||(31821728-31821843)
chr6 (275-389)||(6330947-6331061)
chr6 (272-389)||(3652480-3652597)
chr6 (287-389)||(13492798-13492900)
chr6 (287-381)||(14771762-14771856)
chr6 (272-389)||(20850315-20850432)
chr6 (289-389)||(9352073-9352173)
chr6 (277-389)||(16519967-16520079)
chr6 (277-389)||(20126217-20126329)
chr6 (274-383)||(9440350-9440459)
chr6 (288-389)||(21311981-21312082)
chr6 (310-389)||(11062317-11062396)
chr6 (278-381)||(17027574-17027677)
chr6 (277-367)||(9440485-9440575)
chr6 (311-389)||(13191548-13191626)
chr6 (287-382)||(27334170-27334265)
chr6 (287-382)||(27394910-27395005)
chr6 (287-389)||(23776450-23776552)
chr6 (272-389)||(2681251-2681368)
chr6 (287-380)||(2720608-2720701)
chr6 (277-389)||(7911877-7911989)
chr6 (277-381)||(17731156-17731260)
chr6 (277-383)||(7912309-7912415)
chr6 (289-389)||(20735706-20735806)
chr6 (283-370)||(32292890-32292977)
chr6 (323-389)||(15929627-15929693)
chr6 (276-389)||(2890874-2890986)
chr6 (272-389)||(17850912-17851029)
chr6 (272-389)||(17851368-17851485)
chr6 (276-369)||(21311513-21311606)
chr6 (287-388)||(28065874-28065975)
chr6 (323-383)||(9440898-9440958)
chr6 (314-370)||(20732614-20732670)
chr6 (314-389)||(1991589-1991664)
chr6 (270-349)||(3652971-3653050)
chr6 (313-383)||(15929234-15929304)
chr6 (340-389)||(13492394-13492443)
chr6 (327-380)||(33775048-33775101)
[»] chr4 (46 HSPs)
chr4 (272-389)||(3169200-3169317)
chr4 (277-389)||(14572179-14572291)
chr4 (272-388)||(29628697-29628813)
chr4 (275-389)||(50398567-50398681)
chr4 (272-389)||(21220360-21220477)
chr4 (272-389)||(23942818-23942935)
chr4 (275-389)||(50399022-50399136)
chr4 (275-381)||(51331318-51331424)
chr4 (272-389)||(1645778-1645895)
chr4 (272-389)||(4127466-4127583)
chr4 (276-389)||(4127918-4128031)
chr4 (272-389)||(9423887-9424004)
chr4 (272-367)||(53854858-53854953)
chr4 (272-389)||(12692028-12692145)
chr4 (272-389)||(24629462-24629579)
chr4 (277-389)||(44471354-44471466)
chr4 (309-389)||(14571750-14571830)
chr4 (273-375)||(27578952-27579054)
chr4 (272-389)||(1464141-1464258)
chr4 (272-381)||(53996152-53996261)
chr4 (293-389)||(31817427-31817523)
chr4 (294-389)||(7678651-7678746)
chr4 (314-389)||(8467829-8467904)
chr4 (278-389)||(49998636-49998747)
chr4 (287-389)||(21067291-21067393)
chr4 (272-389)||(24629006-24629126)
chr4 (277-383)||(35871627-35871733)
chr4 (276-389)||(31817881-31817994)
chr4 (277-389)||(23350312-23350424)
chr4 (277-388)||(13266085-13266196)
chr4 (327-389)||(17628560-17628622)
chr4 (288-389)||(14351805-14351906)
chr4 (328-389)||(44470903-44470964)
chr4 (314-388)||(27026539-27026613)
chr4 (316-369)||(44831035-44831088)
chr4 (287-383)||(17029339-17029435)
chr4 (309-381)||(21067765-21067837)
chr4 (289-389)||(43928992-43929092)
chr4 (326-389)||(23943271-23943334)
chr4 (310-388)||(42838655-42838733)
chr4 (273-389)||(13613926-13614042)
chr4 (340-388)||(20306191-20306239)
chr4 (277-388)||(17028873-17028984)
chr4 (318-389)||(27029317-27029388)
chr4 (288-383)||(26200320-26200417)
chr4 (344-389)||(50814854-50814899)
[»] scaffold0005 (2 HSPs)
scaffold0005 (277-389)||(245085-245197)
scaffold0005 (309-389)||(245546-245626)
[»] chr3 (37 HSPs)
chr3 (272-383)||(25230746-25230857)
chr3 (272-383)||(25238333-25238444)
chr3 (277-389)||(31284311-31284423)
chr3 (220-389)||(39640876-39641048)
chr3 (272-389)||(14813943-14814060)
chr3 (272-381)||(25230291-25230400)
chr3 (272-381)||(25237878-25237987)
chr3 (272-389)||(30529681-30529798)
chr3 (289-389)||(20885152-20885252)
chr3 (287-389)||(11180069-11180171)
chr3 (276-389)||(16811379-16811492)
chr3 (278-381)||(7477191-7477294)
chr3 (278-389)||(7493881-7493992)
chr3 (287-389)||(28561755-28561857)
chr3 (287-389)||(50347755-50347857)
chr3 (277-389)||(41472300-41472411)
chr3 (290-389)||(25239112-25239211)
chr3 (287-389)||(13150134-13150236)
chr3 (283-389)||(25802583-25802689)
chr3 (287-389)||(32227256-32227358)
chr3 (287-389)||(32227510-32227611)
chr3 (311-389)||(32796970-32797048)
chr3 (323-389)||(13150589-13150655)
chr3 (272-389)||(37045029-37045146)
chr3 (277-388)||(8067279-8067390)
chr3 (287-389)||(39653173-39653275)
chr3 (276-389)||(16810923-16811036)
chr3 (288-389)||(29224334-29224435)
chr3 (328-389)||(32386769-32386830)
chr3 (277-389)||(25248110-25248222)
chr3 (277-389)||(27187365-27187477)
chr3 (330-389)||(4067395-4067454)
chr3 (318-389)||(25238719-25238790)
chr3 (270-370)||(25803058-25803158)
chr3 (335-388)||(14820211-14820264)
chr3 (289-381)||(41474008-41474100)
chr3 (288-383)||(2911105-2911200)
[»] scaffold0168 (1 HSPs)
scaffold0168 (276-383)||(2740-2847)
[»] scaffold0047 (2 HSPs)
scaffold0047 (272-388)||(18170-18286)
scaffold0047 (288-382)||(17640-17734)
[»] scaffold0040 (1 HSPs)
scaffold0040 (277-389)||(2245-2357)
[»] scaffold0499 (1 HSPs)
scaffold0499 (288-389)||(2086-2187)
[»] scaffold0088 (1 HSPs)
scaffold0088 (272-389)||(23667-23784)
[»] scaffold0007 (1 HSPs)
scaffold0007 (277-389)||(142309-142421)
[»] scaffold0322 (1 HSPs)
scaffold0322 (278-381)||(18966-19069)
[»] scaffold0002 (1 HSPs)
scaffold0002 (287-389)||(154766-154868)
[»] scaffold0024 (1 HSPs)
scaffold0024 (278-389)||(105720-105831)
[»] scaffold0018 (1 HSPs)
scaffold0018 (277-388)||(10299-10410)
[»] scaffold0022 (2 HSPs)
scaffold0022 (287-389)||(162713-162815)
scaffold0022 (314-388)||(69851-69925)
[»] scaffold0333 (1 HSPs)
scaffold0333 (272-389)||(4555-4672)
[»] scaffold0243 (1 HSPs)
scaffold0243 (272-389)||(1214-1331)
[»] scaffold0020 (1 HSPs)
scaffold0020 (277-389)||(107498-107610)
[»] scaffold0557 (1 HSPs)
scaffold0557 (323-389)||(2150-2216)
[»] scaffold0664 (1 HSPs)
scaffold0664 (288-389)||(4017-4118)
[»] scaffold0101 (1 HSPs)
scaffold0101 (323-391)||(45431-45499)
[»] scaffold0391 (1 HSPs)
scaffold0391 (331-383)||(14794-14846)


Alignment Details
Target: chr5 (Bit Score: 243; Significance: 1e-134; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 16 - 383
Target Start/End: Complemental strand, 11161093 - 11160722
Alignment:
Q  16 ctttgttttaattttattcatttgatatatgtgtctaaatacttttcaactgtgaccgtaaccatagaataatg----gttcttatacacaggaaggaac 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    |||||||||||||||||    |    
T  11161093 ctttgttttaattttattcatttgatatatgtgtctaaatacttttcaactgtgaccgtaaccatagaataatgaatggttcttatacacaggaa----c 11160998  T
Q  112 aagaaaaatcattctataatccatgnnnnnnntaaggcaaacaccgtgatactcaagaagcttttttg-ggtatgtattatgtaacaaacaaggctcacc 210  Q
    |||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||| |    
T  11160997 aagaaaaatcattctataatccatgaaaaaaataaggcaaacaccgtgatactcaagaagctttttttcggtatgtattatgtaacaaccaaggctcatc 11160898  T
Q  211 ggggtgggaagtggtcgtcggtgcacaagatataataatgagc---ttccgacagtttttgaatgaaccgaatcgcattggaatgagagggatcatgaag 307  Q
     ||||||||| |||||||||||||||| |||||||||||||||   |||||||| |||||  ||||||||||| |||| |||||||||||||||||||||    
T  11160897 agggtgggaactggtcgtcggtgcacaggatataataatgagcggcttccgacaatttttagatgaaccgaattgcatcggaatgagagggatcatgaag 11160798  T
Q  308 tcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgc 383  Q
    |||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  11160797 tcgtgtaggtatgacactacatagttgaaggaaggcttataataattgtttggtactatctatgtcaacaagatgc 11160722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 272 - 389
Target Start/End: Complemental strand, 10927555 - 10927438
Alignment:
Q  272 gaaccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatg 371  Q
    |||||||||| ||| ||||||||||||||| ||| | ||||||||||||| |||||||||||||||| |||||||||| ||||||||||||||||||||     
T  10927555 gaaccgaatcacatcggaatgagagggatcttgaggccgtgtaggtatgagactacatggttgaaggaaggcttataagaattgtttggtactacctata 10927456  T
Q  372 tcaacaagatgcgtcttc 389  Q
    |||||||||||| |||||    
T  10927455 tcaacaagatgcatcttc 10927438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 272 - 389
Target Start/End: Complemental strand, 10927098 - 10926981
Alignment:
Q  272 gaaccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatg 371  Q
    |||||||||| |||  |||||||||||||| ||| ||||||||||||||  |||||||||||||||| |||||||||| ||||||||||||||||||||     
T  10927098 gaaccgaatcacatcagaatgagagggatcctgaggtcgtgtaggtatgggactacatggttgaaggaaggcttataagaattgtttggtactacctata 10926999  T
Q  372 tcaacaagatgcgtcttc 389  Q
    |||||||||||| |||||    
T  10926998 tcaacaagatgcatcttc 10926981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 273 - 383
Target Start/End: Complemental strand, 20039625 - 20039515
Alignment:
Q  273 aaccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgt 372  Q
    ||||||||| ||| ||||||||||||||||||| | |||||||||||   ||||||| |||||||| |||||||||| |||||||||||||||||||| |    
T  20039625 aaccgaatcacatcggaatgagagggatcatgaggccgtgtaggtataggactacatagttgaaggaaggcttataagaattgtttggtactacctatat 20039526  T
Q  373 caacaagatgc 383  Q
    |||||||||||    
T  20039525 caacaagatgc 20039515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 272 - 389
Target Start/End: Complemental strand, 17445607 - 17445490
Alignment:
Q  272 gaaccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatg 371  Q
    |||||||||| ||| | ||||||||||||| ||| | |||||||| |||  |||||||||||||||| |||||||||| ||||||||||||||||||||     
T  17445607 gaaccgaatcacatcgaaatgagagggatcctgaggccgtgtaggcatgggactacatggttgaaggaaggcttataagaattgtttggtactacctata 17445508  T
Q  372 tcaacaagatgcgtcttc 389  Q
    |||||||||||| |||||    
T  17445507 tcaacaagatgcatcttc 17445490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 287 - 389
Target Start/End: Original strand, 2193825 - 2193927
Alignment:
Q  287 ggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgcgtc 386  Q
    ||||||||||||||||||| | | ||||||||||  |||||||||||||||| |||||||||| ||||||| |||||||||||| |||||||||||| ||    
T  2193825 ggaatgagagggatcatgaggccttgtaggtatgggactacatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatc 2193924  T
Q  387 ttc 389  Q
    |||    
T  2193925 ttc 2193927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 287 - 389
Target Start/End: Original strand, 1821915 - 1822017
Alignment:
Q  287 ggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgcgtc 386  Q
    |||||||||| |||| | | |||||| |||||||| ||| |||||||||||| |||||||||| |||||||||||||||||||| |||||||||||| ||    
T  1821915 ggaatgagagagatcttaaggtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatc 1822014  T
Q  387 ttc 389  Q
    |||    
T  1822015 ttc 1822017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 272 - 389
Target Start/End: Complemental strand, 27646987 - 27646870
Alignment:
Q  272 gaaccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatg 371  Q
    |||||||||| ||| ||||||||||||||| |   | ||||||||||||   ||||||||||||||| |||||||||| ||||||||||||||||||||     
T  27646987 gaaccgaatcacatcggaatgagagggatcctagggccgtgtaggtatggggctacatggttgaaggaaggcttataagaattgtttggtactacctata 27646888  T
Q  372 tcaacaagatgcgtcttc 389  Q
     ||||||||||| |||||    
T  27646887 acaacaagatgcatcttc 27646870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 272 - 389
Target Start/End: Original strand, 34867784 - 34867901
Alignment:
Q  272 gaaccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatg 371  Q
    |||||||||| ||  |||||||||||| || ||| | |||| |||||||  ||| |||||||||||| |||||||||| ||||||||||||||||||||     
T  34867784 gaaccgaatcacaccggaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctata 34867883  T
Q  372 tcaacaagatgcgtcttc 389  Q
    |||||||||||| |||||    
T  34867884 tcaacaagatgcatcttc 34867901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 272 - 389
Target Start/End: Complemental strand, 21886298 - 21886181
Alignment:
Q  272 gaaccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatg 371  Q
    |||||||||| ||  |||||||||||| || ||| || ||| |||||||  ||| |||||||||||| |||||||||| |||||||||||||||| |||     
T  21886298 gaaccgaatcacaccggaatgagagggttcctgaggttgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacatata 21886199  T
Q  372 tcaacaagatgcgtcttc 389  Q
    |||||||||||| |||||    
T  21886198 tcaacaagatgcatcttc 21886181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 272 - 389
Target Start/End: Original strand, 39146933 - 39147050
Alignment:
Q  272 gaaccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatg 371  Q
    |||| ||||| ||| | ||||||||||||||||| | ||||||||||||  |||||||||||||||| || ||||||| ||||||||| |||||| |||     
T  39146933 gaactgaatcacatcgaaatgagagggatcatgaggccgtgtaggtatgggactacatggttgaaggtagacttataagaattgtttgatactacttata 39147032  T
Q  372 tcaacaagatgcgtcttc 389  Q
    | |||||||||| |||||    
T  39147033 ttaacaagatgcatcttc 39147050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 272 - 389
Target Start/End: Complemental strand, 42788798 - 42788681
Alignment:
Q  272 gaaccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatg 371  Q
    |||||||||| ||  ||||||||||||||| ||| | ||||||||  ||  |||||||||||||| | || ||||||| ||||||||||||||||||||     
T  42788798 gaaccgaatcacaacggaatgagagggatcctgaggccgtgtaggattgggactacatggttgaaagaagacttataagaattgtttggtactacctata 42788699  T
Q  372 tcaacaagatgcgtcttc 389  Q
    |||||||||||| |||||    
T  42788698 tcaacaagatgcatcttc 42788681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 277 - 389
Target Start/End: Original strand, 2473958 - 2474070
Alignment:
Q  277 gaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaac 376  Q
    ||||| ||| ||||||||||||||| | | |||||  ||| |||| ||| |||||||||||| |||||||||| |||||||||||||| ||||| |||||    
T  2473958 gaatcacatcggaatgagagggatcctaaggtcgtacaggcatgagactgcatggttgaaggaaggcttataagaattgtttggtactgcctatatcaac 2474057  T
Q  377 aagatgcgtcttc 389  Q
    ||||||| |||||    
T  2474058 aagatgcatcttc 2474070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 277 - 389
Target Start/End: Original strand, 22556535 - 22556647
Alignment:
Q  277 gaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaac 376  Q
    ||||| ||| |||||||||||| || ||| | |||| |||||||  ||| |||||||||||| |||||||||  |||||||||||||||||||| |||||    
T  22556535 gaatcacatcggaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaaggaaggcttatatgaattgtttggtactacctatatcaac 22556634  T
Q  377 aagatgcgtcttc 389  Q
    ||||||| |||||    
T  22556635 aagatgcatcttc 22556647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 277 - 382
Target Start/End: Original strand, 189067 - 189172
Alignment:
Q  277 gaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaac 376  Q
    ||||| ||| ||||||||||||||| ||| | |||  | |||||  ||| |||||||||||| |||||||||| |||||||||||||||||||| |||||    
T  189067 gaatcacatcggaatgagagggatcctgaggccgtacatgtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaac 189166  T
Q  377 aagatg 382  Q
    ||||||    
T  189167 aagatg 189172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 288 - 389
Target Start/End: Complemental strand, 8642170 - 8642069
Alignment:
Q  288 gaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgcgtct 387  Q
    |||||||||||||| | | | |||| |||||||  ||| |||||||||||| |||||||||| |||| ||||||||||||||| |||||||||||| |||    
T  8642170 gaatgagagggatcctaaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattatttggtactacctatatcaacaagatgcatct 8642071  T
Q  388 tc 389  Q
    ||    
T  8642070 tc 8642069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 220 - 389
Target Start/End: Complemental strand, 15513220 - 15513047
Alignment:
Q  220 agtggtcgtcggtgcacaagatataataatgagc---ttccgacagtttttgaatgaaccgaatcgcattggaatgagagggatcatgaagtcgtgtagg 316  Q
    |||||||| |||||||||||  |  |||||||||   | ||||||||||||  | |||||||||| ||| ||||||||||||||||| | |  |||||||    
T  15513220 agtggtcgccggtgcacaaggcacgataatgagcggctcccgacagtttttagaggaaccgaatcacatcggaatgagagggatcattaggctgtgtagg 15513121  T
Q  317 tatgacactacatggttgaagg--gaggcttataataattgtttggtactacctatgtcaacaagatgcgtcttc 389  Q
    ||||  ||||||||||||||||   | |||||||| ||||| ||||||||||| || |||||||||||| |||||    
T  15513120 tatgggactacatggttgaaggaatatgcttataagaattg-ttggtactaccaatatcaacaagatgcatcttc 15513047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 273 - 389
Target Start/End: Complemental strand, 8391472 - 8391357
Alignment:
Q  273 aaccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgt 372  Q
    ||||||||| ||| ||||||||||||||  ||| | |||||||| |||| |||||||| ||||||| || ||||||| |||||||||||||| ||| | |    
T  8391472 aaccgaatcacatcggaatgagagggattctgaggccgtgtaggcatgagactacatgattgaaggaagacttataagaattgtttggtact-cctgtat 8391374  T
Q  373 caacaagatgcgtcttc 389  Q
    ||||||||||| |||||    
T  8391373 caacaagatgcatcttc 8391357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 277 - 389
Target Start/End: Original strand, 22556968 - 22557080
Alignment:
Q  277 gaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaac 376  Q
    ||||| ||| |||||||||| | |||||| | |||| |||||||  ||| |||||||||||| |||||||||  ||||||||||||||||| || |||||    
T  22556968 gaatcacatcggaatgagagagttcatgaggccgtgcaggtatgggactgcatggttgaaggaaggcttatatgaattgtttggtactaccaatatcaac 22557067  T
Q  377 aagatgcgtcttc 389  Q
    ||||||| |||||    
T  22557068 aagatgcatcttc 22557080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 277 - 389
Target Start/End: Complemental strand, 3886748 - 3886636
Alignment:
Q  277 gaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaac 376  Q
    ||||| ||| ||||||||||||||| ||| |||||  | |||||  ||| |||||| ||||| | |||||||  |||||||||||||||||||| |||||    
T  3886748 gaatcacatcggaatgagagggatcctgaggtcgtacaagtatgggactgcatggtagaaggaatgcttatatgaattgtttggtactacctatatcaac 3886649  T
Q  377 aagatgcgtcttc 389  Q
    ||||||| |||||    
T  3886648 aagatgcatcttc 3886636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 287 - 383
Target Start/End: Original strand, 18304440 - 18304536
Alignment:
Q  287 ggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgc 383  Q
    ||||||||| ||||| ||| ||||||||||||||  ||||||||| ||| |  | |||||||  |||||||||||||||||||| ||||||||||||    
T  18304440 ggaatgagaaggatcctgaggtcgtgtaggtatgggactacatggatgatgaaaagcttatataaattgtttggtactacctatatcaacaagatgc 18304536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 273 - 383
Target Start/End: Complemental strand, 2058807 - 2058697
Alignment:
Q  273 aaccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgt 372  Q
    ||||||||| ||| ||| |||||| |||| ||||||| || || ||||| |||  ||| ||||||| || ||||||  |||||||||||||||||||| |    
T  2058807 aaccgaatcacatcggattgagagagatcctgaagtcatgcagctatgagactggatgattgaaggaagacttatatgaattgtttggtactacctatat 2058708  T
Q  373 caacaagatgc 383  Q
    |||||||||||    
T  2058707 caacaagatgc 2058697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 323 - 389
Target Start/End: Original strand, 34372113 - 34372179
Alignment:
Q  323 actacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgcgtcttc 389  Q
    |||||||||||||||| | ||||| || |||||||||||||||||||| |||||||||||| |||||    
T  34372113 actacatggttgaaggaatgcttaaaagaattgtttggtactacctatatcaacaagatgcatcttc 34372179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 292 - 389
Target Start/End: Complemental strand, 18750328 - 18750231
Alignment:
Q  292 gagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgcgtcttc 389  Q
    ||||| |||| |||||||||| |||| ||  ||| |||||||||||| ||| |||||| ||||||||||||||||||||  ||| ||||||| |||||    
T  18750328 gagagagatcctgaagtcgtgcaggtttggaactgcatggttgaaggaaggattataacaattgtttggtactacctataccaaaaagatgcatcttc 18750231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 277 - 389
Target Start/End: Original strand, 2474404 - 2474516
Alignment:
Q  277 gaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaac 376  Q
    ||||| ||| |||||||||| |||| | | |||||  || ||||  ||| |||||||||||| || |||| || |||||||||||||||||||| |||||    
T  2474404 gaatcacatcggaatgagagagatcctaaggtcgtacagatatgggactgcatggttgaaggaagacttaaaagaattgtttggtactacctatatcaac 2474503  T
Q  377 aagatgcgtcttc 389  Q
    ||||||| |||||    
T  2474504 aagatgcatcttc 2474516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 277 - 389
Target Start/End: Complemental strand, 3887204 - 3887092
Alignment:
Q  277 gaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaac 376  Q
    ||||| ||| |||||||||| |||| ||| | |||  |||||||  ||| |||||||||||| || ||||||  |||| ||||||||||||||| |||||    
T  3887204 gaatcacatcggaatgagagtgatcctgaggccgtacaggtatgggactgcatggttgaaggaagacttatatgaattatttggtactacctatatcaac 3887105  T
Q  377 aagatgcgtcttc 389  Q
    ||||||| |||||    
T  3887104 aagatgcatcttc 3887092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 278 - 389
Target Start/End: Complemental strand, 24182391 - 24182280
Alignment:
Q  278 aatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaaca 377  Q
    |||| |||| |||||||||||||| |||   |||| | |||||| || | ||||||||||| |||||||||| |||| |||||||||| ||||  |||||    
T  24182391 aatcacattagaatgagagggatcttgagaacgtgcaagtatgagacgaaatggttgaaggaaggcttataagaattatttggtactatctataccaaca 24182292  T
Q  378 agatgcgtcttc 389  Q
    |||||| |||||    
T  24182291 agatgcatcttc 24182280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 327 - 389
Target Start/End: Original strand, 34371661 - 34371723
Alignment:
Q  327 catggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgcgtcttc 389  Q
    |||||||||||| | ||||| || |||||||||||||||||||| |||||||||||| |||||    
T  34371661 catggttgaaggaatgcttaaaagaattgtttggtactacctatatcaacaagatgcatcttc 34371723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 273 - 389
Target Start/End: Complemental strand, 30719956 - 30719840
Alignment:
Q  273 aaccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgt 372  Q
    ||||||||| |||  |||||||||||||| ||| || ||| | |||||  ||  ||| |||||||| |||||||||  ||||||||||||||||||||      
T  30719956 aaccgaatcacatcagaatgagagggatcctgaggttgtgcaagtatgggacatcattgttgaaggaaggcttatatgaattgtttggtactacctataa 30719857  T
Q  373 caacaagatgcgtcttc 389  Q
     |||||||||| |||||    
T  30719856 aaacaagatgcatcttc 30719840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 289 - 380
Target Start/End: Complemental strand, 16370843 - 16370752
Alignment:
Q  289 aatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaaga 380  Q
    |||||||||| || ||| | | ||||||||| | ||| |||||||||||| |  ||||||| |||||||||||||||| ||| |||||||||    
T  16370843 aatgagagggttcctgatgccatgtaggtataagactgcatggttgaaggaaaacttataagaattgtttggtactacttatatcaacaaga 16370752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 288 - 349
Target Start/End: Complemental strand, 29680236 - 29680175
Alignment:
Q  288 gaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataa 349  Q
    ||||||||| |||| ||| | ||||||||||||  |||||||||||||||| ||||||||||    
T  29680236 gaatgagagagatcttgaggccgtgtaggtatgggactacatggttgaaggaaggcttataa 29680175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 389
Target Start/End: Complemental strand, 30684707 - 30684591
Alignment:
Q  273 aaccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgt 372  Q
    |||| |||| ||| |||||||| |||||| ||| || ||| | |||||  ||  ||| ||||||||||||||||||  ||||||||||||||| ||||      
T  30684707 aaccaaatcacatcggaatgagggggatcctgaggttgtgcaagtatggaacatcattgttgaagggaggcttatatgaattgtttggtactatctataa 30684608  T
Q  373 caacaagatgcgtcttc 389  Q
     |||||||||| |||||    
T  30684607 aaacaagatgcatcttc 30684591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 272 - 383
Target Start/End: Original strand, 42429140 - 42429250
Alignment:
Q  272 gaaccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatg 371  Q
    |||||||||| ||| ||||| ||||| ||| |||   ||||||||||||  |  |||||||||||||  | ||||||| |||||||||||||||||| |     
T  42429140 gaaccgaatcacatcggaataagagg-atcctgagaccgtgtaggtatgtgaacacatggttgaaggaggacttataagaattgtttggtactaccttta 42429238  T
Q  372 tcaacaagatgc 383  Q
    ||||||| ||||    
T  42429239 tcaacaatatgc 42429250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 358
Target Start/End: Complemental strand, 22975157 - 22975076
Alignment:
Q  277 gaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgttt 358  Q
    ||||| ||| ||||||||||||||| ||| | |||| |||||||  ||| |||||||||||  | |||||||| ||||||||    
T  22975157 gaatcacatcggaatgagagggatcctgaggccgtgcaggtatgtgactgcatggttgaagaaaagcttataagaattgttt 22975076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 74; Significance: 8e-34; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 272 - 389
Target Start/End: Complemental strand, 18099030 - 18098913
Alignment:
Q  272 gaaccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatg 371  Q
    |||||||||| ||| ||||||||||| ||| ||| | ||||||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||     
T  18099030 gaaccgaatcacatcggaatgagaggaatcctgaggccgtgtaggtatgagactacatggttgaagggatgcttataagaattgtttggtactacctata 18098931  T
Q  372 tcaacaagatgcgtcttc 389  Q
    |||||||||||| |||||    
T  18098930 tcaacaagatgcatcttc 18098913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 275 - 389
Target Start/End: Original strand, 33174955 - 33175069
Alignment:
Q  275 ccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtca 374  Q
    ||||||| ||| ||||||||||||||| ||| | ||||||||||||  |||||||||||||||| |||||||||| |||||||||||||||||||| |||    
T  33174955 ccgaatcacatcggaatgagagggatcctgaggccgtgtaggtatgggactacatggttgaaggaaggcttataagaattgtttggtactacctatatca 33175054  T
Q  375 acaagatgcgtcttc 389  Q
    ||||||||| |||||    
T  33175055 acaagatgcatcttc 33175069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 273 - 389
Target Start/End: Original strand, 1953150 - 1953266
Alignment:
Q  273 aaccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgt 372  Q
    ||||||||| ||| ||||||||||||||| |||||||||| |||||||| ||| |||||||||||| || | ||||| |||||||||||||||||||| |    
T  1953150 aaccgaatcacatcggaatgagagggatcctgaagtcgtgcaggtatgagactgcatggttgaaggaagacctataagaattgtttggtactacctatat 1953249  T
Q  373 caacaagatgcgtcttc 389  Q
    |||| |||||| |||||    
T  1953250 caactagatgcatcttc 1953266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 287 - 389
Target Start/End: Original strand, 8256535 - 8256637
Alignment:
Q  287 ggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgcgtc 386  Q
    ||||||||||||||| ||||| | ||||||||||  |||||||||||||||| |||||||||| ||||||| |||||||||||| |||||||||||| ||    
T  8256535 ggaatgagagggatcttgaagccttgtaggtatgggactacatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatc 8256634  T
Q  387 ttc 389  Q
    |||    
T  8256635 ttc 8256637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 272 - 389
Target Start/End: Original strand, 33174499 - 33174614
Alignment:
Q  272 gaaccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatg 371  Q
    |||||||||| ||| ||||||||||||||| ||| | ||||||||||||  ||||||  |||||||| |||||||||| ||||||||||||||||||||     
T  33174499 gaaccgaatcacatcggaatgagagggatcctgatgccgtgtaggtatgggactaca--gttgaaggaaggcttataagaattgtttggtactacctata 33174596  T
Q  372 tcaacaagatgcgtcttc 389  Q
    |||||||||||| |||||    
T  33174597 tcaacaagatgcatcttc 33174614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 276 - 389
Target Start/End: Original strand, 29804680 - 29804793
Alignment:
Q  276 cgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaa 375  Q
    |||||| ||| ||||||||||||||| ||| | | ||||||||||  |||||||||||||||| |||||||||| ||||||| |||||||||||| ||||    
T  29804680 cgaatcacatcggaatgagagggatcctgaggccttgtaggtatgggactacatggttgaaggcaggcttataagaattgttgggtactacctatatcaa 29804779  T
Q  376 caagatgcgtcttc 389  Q
    |||||||| |||||    
T  29804780 caagatgcatcttc 29804793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 277 - 389
Target Start/End: Original strand, 30966233 - 30966345
Alignment:
Q  277 gaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaac 376  Q
    ||||||||| ||||||||||||||| ||| | |||  |||||||  ||| |||||||||||| |||||||||| |||||||||||||||||||| |||||    
T  30966233 gaatcgcatcggaatgagagggatcctgaggccgtacaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaac 30966332  T
Q  377 aagatgcgtcttc 389  Q
    ||||||| |||||    
T  30966333 aagatgcatcttc 30966345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 272 - 389
Target Start/End: Original strand, 1912519 - 1912636
Alignment:
Q  272 gaaccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatg 371  Q
    |||| ||||| ||| ||||||||||||||| ||| ||  ||||||||||| |||||||||||||| | ||  |||||| ||||||||||||||||||||     
T  1912519 gaactgaatcacatcggaatgagagggatcctgaggttatgtaggtatgagactacatggttgaaagtagatttataagaattgtttggtactacctata 1912618  T
Q  372 tcaacaagatgcgtcttc 389  Q
    |||||||||||| |||||    
T  1912619 tcaacaagatgcatcttc 1912636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 272 - 389
Target Start/End: Original strand, 11388183 - 11388298
Alignment:
Q  272 gaaccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatg 371  Q
    |||||||||| ||| ||||||||||| ||| ||| | ||||||||||||| |||||||||||||||| | ||||| || ||||||||||||||||||||     
T  11388183 gaaccgaatcacatcggaatgagagg-atcctgatgccgtgtaggtatgagactacatggttgaaggaatgcttaaaa-aattgtttggtactacctata 11388280  T
Q  372 tcaacaagatgcgtcttc 389  Q
    |||||||||||| |||||    
T  11388281 tcaacaagatgcatcttc 11388298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 259 - 389
Target Start/End: Original strand, 16379374 - 16379504
Alignment:
Q  259 acagtttttgaatgaaccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgttt 358  Q
    ||||||| | || ||||||||||  ||||||||||||||||||  || | |||| |||||||  ||| |||||||||||| || ||||||  ||||||||    
T  16379374 acagtttataaacgaaccgaatcaaattggaatgagagggatcccgaggccgtgcaggtatgggactgcatggttgaaggaagacttatacgaattgttt 16379473  T
Q  359 ggtactacctatgtcaacaagatgcgtcttc 389  Q
    |||||||||||| |||||||||||| |||||    
T  16379474 ggtactacctatatcaacaagatgcatcttc 16379504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 287 - 389
Target Start/End: Complemental strand, 25338134 - 25338032
Alignment:
Q  287 ggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgcgtc 386  Q
    |||||||||||| || ||| |||||| |||||||  ||| |||||||||||| |||||||||| ||||||| |||||||||||| |||||||||||| ||    
T  25338134 ggaatgagagggttcctgaggtcgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatc 25338035  T
Q  387 ttc 389  Q
    |||    
T  25338034 ttc 25338032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 287 - 389
Target Start/End: Original strand, 41754298 - 41754400
Alignment:
Q  287 ggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgcgtc 386  Q
    |||||||||||| || ||| | |||| |||||||| ||| |||||||||||| |||||||||| ||||||||||||||| |||| |||||||||||| ||    
T  41754298 ggaatgagagggttcttgaggccgtgcaggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactatctatatcaacaagatgcatc 41754397  T
Q  387 ttc 389  Q
    |||    
T  41754398 ttc 41754400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 272 - 389
Target Start/End: Original strand, 1707036 - 1707152
Alignment:
Q  272 gaaccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatg 371  Q
    |||||||||| ||| ||||||||||| ||| |||    |||||||||||| |||||||| ||||||| || ||||||| ||||||||||||||||||||     
T  1707036 gaaccgaatcacatcggaatgagagg-atcctgagactgtgtaggtatgagactacatgattgaaggaagacttataagaattgtttggtactacctata 1707134  T
Q  372 tcaacaagatgcgtcttc 389  Q
    |||||||||||| |||||    
T  1707135 tcaacaagatgcatcttc 1707152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 277 - 389
Target Start/End: Complemental strand, 5399964 - 5399852
Alignment:
Q  277 gaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaac 376  Q
    ||||| ||| ||||||||||||||| ||| |||||| | |||||  | |  |||||| ||||||||||||||| |||||||||||||||||||| |||||    
T  5399964 gaatcacatcggaatgagagggatcttgaggtcgtgcaagtatgggagtgtatggtttaagggaggcttataagaattgtttggtactacctatatcaac 5399865  T
Q  377 aagatgcgtcttc 389  Q
    ||||||| |||||    
T  5399864 aagatgcatcttc 5399852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 310 - 382
Target Start/End: Original strand, 16542017 - 16542089
Alignment:
Q  310 gtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatg 382  Q
    ||||||||||||| ||||||||||||||| || |||||||||||||||| ||||||||||| |||||||||||    
T  16542017 gtgtaggtatgactctacatggttgaaggaagacttataataattgttttgtactacctatatcaacaagatg 16542089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 272 - 388
Target Start/End: Complemental strand, 18448070 - 18447954
Alignment:
Q  272 gaaccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatg 371  Q
    |||||||||| ||| ||||||| ||||||| ||| | ||||||||||||  |||||||||||||||  || ||||||| |||||||||||||||| | |     
T  18448070 gaaccgaatcacatcggaatgatagggatcctgaggccgtgtaggtatgtgactacatggttgaagtaagacttataagaattgtttggtactacttgta 18447971  T
Q  372 tcaacaagatgcgtctt 388  Q
    |||||||||||| ||||    
T  18447970 tcaacaagatgcatctt 18447954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 277 - 389
Target Start/End: Original strand, 30966689 - 30966801
Alignment:
Q  277 gaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaac 376  Q
    ||||||||| ||||||||||||||| ||| | |||  | |||||  ||| |||||||||||| ||| |||||| |||||||||||||||||||| |||||    
T  30966689 gaatcgcatcggaatgagagggatcctgaggccgtacatgtatgggactgcatggttgaaggaaggattataagaattgtttggtactacctatatcaac 30966788  T
Q  377 aagatgcgtcttc 389  Q
    ||||||| |||||    
T  30966789 aagatgcatcttc 30966801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 278 - 383
Target Start/End: Complemental strand, 38899058 - 38898953
Alignment:
Q  278 aatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaaca 377  Q
    |||| ||| |||| ||||| |||| ||| | ||||||||||| | ||||||||||||||||   |||||||| |||||||||||||||||||| ||||||    
T  38899058 aatcacatcggaaggagagtgatcttgaggccgtgtaggtatcagactacatggttgaaggagagcttataagaattgtttggtactacctatatcaaca 38898959  T
Q  378 agatgc 383  Q
    ||||||    
T  38898958 agatgc 38898953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 309 - 389
Target Start/End: Original strand, 11394566 - 11394645
Alignment:
Q  309 cgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgcgtcttc 389  Q
    ||||||||||||| |||||||||||||||| | ||||| || |||||||||||||||||||| |||||||||||| |||||    
T  11394566 cgtgtaggtatgagactacatggttgaaggaatgcttaaaa-aattgtttggtactacctatatcaacaagatgcatcttc 11394645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 277 - 388
Target Start/End: Original strand, 24818325 - 24818436
Alignment:
Q  277 gaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaac 376  Q
    ||||| ||| ||||||||||||||| ||| | |||| | |||||  ||| ||||||| |||| |||||||||| |||||||| ||||||||||| |||||    
T  24818325 gaatcacatcggaatgagagggatcctgaggccgtgcatgtatgggactgcatggttcaaggaaggcttataagaattgtttagtactacctatatcaac 24818424  T
Q  377 aagatgcgtctt 388  Q
    ||||||| ||||    
T  24818425 aagatgcatctt 24818436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 283 - 389
Target Start/End: Original strand, 8073897 - 8074003
Alignment:
Q  283 cattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatg 382  Q
    |||| ||||||||||||||||||  | ||| |||||||   ||| | |||||||||||| ||||||| ||||||||||||||||||||  ||||||||||    
T  8073897 cattagaatgagagggatcatgagattgtgcaggtatgggtctataaggttgaagggagacttataagaattgtttggtactacctataccaacaagatg 8073996  T
Q  383 cgtcttc 389  Q
    | |||||    
T  8073997 catcttc 8074003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 287 - 389
Target Start/End: Complemental strand, 30963857 - 30963755
Alignment:
Q  287 ggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgcgtc 386  Q
    ||||||||||||||||||||| |||| ||||| || | | |||||||||||| |  ||||||| |||||| |||| |||||||| |||||||||||| ||    
T  30963857 ggaatgagagggatcatgaagccgtgcaggtaagagaatgcatggttgaaggaaaacttataagaattgtatggttctacctatatcaacaagatgcatc 30963758  T
Q  387 ttc 389  Q
    |||    
T  30963757 ttc 30963755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 289 - 382
Target Start/End: Original strand, 83028 - 83121
Alignment:
Q  289 aatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatg 382  Q
    ||||||||||||| |||  | ||| |||||||| |||||||||||||||| | |||||||| ||| ||||||||||||||||  ||||||||||    
T  83028 aatgagagggatcctgagattgtgcaggtatgagactacatggttgaaggtatgcttataagaatcgtttggtactacctataccaacaagatg 83121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 272 - 383
Target Start/End: Complemental strand, 25434208 - 25434097
Alignment:
Q  272 gaaccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatg 371  Q
    |||||||||| ||  ||||||||||||||| ||| | ||||  ||||||  ||| |||||||||||| |||||||||| ||||||||| ||| |||| |     
T  25434208 gaaccgaatcacaccggaatgagagggatcctgaggccgtgctggtatgggacttcatggttgaaggaaggcttataagaattgtttgatacaaccttta 25434109  T
Q  372 tcaacaagatgc 383  Q
    ||||||||||||    
T  25434108 tcaacaagatgc 25434097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 288 - 381
Target Start/End: Original strand, 15619908 - 15620001
Alignment:
Q  288 gaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagat 381  Q
    ||||||||||||||  || | |||| | |||||| ||| ||| |||||||| | |||||||| |||||||||||||||||||| ||||||||||    
T  15619908 gaatgagagggatcccgatgccgtgcaagtatgagactgcatagttgaaggcaagcttataagaattgtttggtactacctatatcaacaagat 15620001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 277 - 389
Target Start/End: Complemental strand, 29259767 - 29259655
Alignment:
Q  277 gaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaac 376  Q
    ||||| ||| ||||||||||||||| |||   |||  | |||||  ||| |||||||||||| |||||||| | |||||||||||||||| ||| |||||    
T  29259767 gaatcacatcggaatgagagggatcctgagaccgtacaagtatgggactgcatggttgaaggaaggcttattaaaattgtttggtactacatatatcaac 29259668  T
Q  377 aagatgcgtcttc 389  Q
    ||||||| |||||    
T  29259667 aagatgcatcttc 29259655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 330 - 389
Target Start/End: Original strand, 33771053 - 33771112
Alignment:
Q  330 ggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgcgtcttc 389  Q
    ||||||||  |||||||||| |||||||||||||||||||| |||||||||||| |||||    
T  33771053 ggttgaagaaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 33771112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 287 - 389
Target Start/End: Original strand, 16378946 - 16379048
Alignment:
Q  287 ggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgcgtc 386  Q
    ||||||||||||||   || | |||| | |||||| ||| |||||||||||| || ||||||  ||||||||| |||||||||| |||||||||||| ||    
T  16378946 ggaatgagagggattccgaggccgtgcaagtatgagactgcatggttgaaggaagtcttatacgaattgtttgatactacctatatcaacaagatgcatc 16379045  T
Q  387 ttc 389  Q
    |||    
T  16379046 ttc 16379048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 288 - 381
Target Start/End: Original strand, 9909102 - 9909195
Alignment:
Q  288 gaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagat 381  Q
    |||||||||||||| |||| |||| || |||||| |||| |||||||||||  || ||||||| |||  ||||||||||||||  |||||||||    
T  9909102 gaatgagagggatcctgaaatcgtataagtatgagactatatggttgaaggagggtttataatgattaattggtactacctataccaacaagat 9909195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 327 - 388
Target Start/End: Original strand, 20502072 - 20502133
Alignment:
Q  327 catggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgcgtctt 388  Q
    |||||||||||| |||||||||| ||||||||||||||  |||| |||||||||||| ||||    
T  20502072 catggttgaaggaaggcttataagaattgtttggtactttctatatcaacaagatgcttctt 20502133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 327 - 388
Target Start/End: Complemental strand, 30963360 - 30963299
Alignment:
Q  327 catggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgcgtctt 388  Q
    |||| ||||||| |||||||||| ||||||| |||||||||||| |||||||||||| ||||    
T  30963360 catgattgaaggaaggcttataagaattgttaggtactacctatatcaacaagatgcatctt 30963299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 289 - 389
Target Start/End: Complemental strand, 27883061 - 27882961
Alignment:
Q  289 aatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgcgtctt 388  Q
    ||||||||||||| ||| | |||| | |||||| ||| ||| |||||||| | |||||||| |||||||||||| || |||| |||| ||||||| ||||    
T  27883061 aatgagagggatcctgaggccgtgcatgtatgagactgcattgttgaaggaatgcttataagaattgtttggtattatctatatcaataagatgcatctt 27882962  T
Q  389 c 389  Q
    |    
T  27882961 c 27882961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 329 - 381
Target Start/End: Complemental strand, 8181446 - 8181394
Alignment:
Q  329 tggttgaagggaggcttataataattgtttggtactacctatgtcaacaagat 381  Q
    |||||||||| || ||| ||| |||||||||||||||||||| ||||||||||    
T  8181446 tggttgaaggaagacttttaagaattgtttggtactacctatatcaacaagat 8181394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 314 - 389
Target Start/End: Original strand, 13191010 - 13191085
Alignment:
Q  314 aggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgcgtcttc 389  Q
    |||||| | ||| ||||||| |||| || ||||||| |||||||||||||||| |||  ||||||||||| |||||    
T  13191010 aggtataagactgcatggttcaaggaagacttataagaattgtttggtactacatataccaacaagatgcatcttc 13191085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 74; Significance: 8e-34; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 272 - 389
Target Start/End: Complemental strand, 43057675 - 43057558
Alignment:
Q  272 gaaccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatg 371  Q
    |||||||||| ||| ||||||||||||||| ||| | ||||||||||||| |||||||||||||||| |||||||||| ||||||||||||||||||||     
T  43057675 gaaccgaatcacatcggaatgagagggatcctgaggccgtgtaggtatgagactacatggttgaaggaaggcttataagaattgtttggtactacctata 43057576  T
Q  372 tcaacaagatgcgtcttc 389  Q
    | |||||||||| |||||    
T  43057575 ttaacaagatgcatcttc 43057558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 272 - 389
Target Start/End: Complemental strand, 50002437 - 50002320
Alignment:
Q  272 gaaccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatg 371  Q
    |||||||||| ||| ||||||||||||||||||| | |||||||| |||  |||||||||||||||| |||||||||| |||||||||||||||||| |     
T  50002437 gaaccgaatcacatcggaatgagagggatcatgaggccgtgtaggcatgggactacatggttgaaggaaggcttataagaattgtttggtactaccttta 50002338  T
Q  372 tcaacaagatgcgtcttc 389  Q
    |||||||||||| |||||    
T  50002337 tcaacaagatgcatcttc 50002320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 272 - 389
Target Start/End: Original strand, 52250200 - 52250317
Alignment:
Q  272 gaaccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatg 371  Q
    |||||||||| ||  ||||||||||||||||||| | | ||||||||||  |||||||||| ||||| |||||||||| ||||||| ||||||||||||     
T  52250200 gaaccgaatcacaccggaatgagagggatcatgaggccttgtaggtatgggactacatggtcgaaggaaggcttataagaattgttgggtactacctata 52250299  T
Q  372 tcaacaagatgcgtcttc 389  Q
    |||||||||||| |||||    
T  52250300 tcaacaagatgcatcttc 52250317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 277 - 389
Target Start/End: Complemental strand, 35761061 - 35760949
Alignment:
Q  277 gaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaac 376  Q
    ||||| ||| ||||||||||||||| ||| | |||| |||||||| ||| |||||||||||| | |||||||| |||||||||||||||||||| |||||    
T  35761061 gaatcacatcggaatgagagggatcctgaggccgtgcaggtatgagactgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 35760962  T
Q  377 aagatgcgtcttc 389  Q
    ||||||| |||||    
T  35760961 aagatgcatcttc 35760949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 275 - 389
Target Start/End: Complemental strand, 50002856 - 50002742
Alignment:
Q  275 ccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtca 374  Q
    ||||||| ||| |||||||||| |||| ||| | |||||||| |||  ||| |||||||||||| |||||||||| |||||||||||||||||||| |||    
T  50002856 ccgaatcacatcggaatgagagagatcctgaggccgtgtaggcatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatca 50002757  T
Q  375 acaagatgcgtcttc 389  Q
    ||||||||| |||||    
T  50002756 acaagatgcatcttc 50002742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 272 - 389
Target Start/End: Complemental strand, 20054232 - 20054115
Alignment:
Q  272 gaaccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatg 371  Q
    |||||||||| ||  |||||||||||| || ||| | |||| |||||||  ||| |||||||||||| |||||||||| ||||||||||||||||||||     
T  20054232 gaaccgaatcacaccggaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctata 20054133  T
Q  372 tcaacaagatgcgtcttc 389  Q
    |||||||||||| |||||    
T  20054132 tcaacaagatgcatcttc 20054115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 272 - 389
Target Start/End: Complemental strand, 20054688 - 20054571
Alignment:
Q  272 gaaccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatg 371  Q
    |||||||||| ||  |||||||||||| || ||| | |||| |||||||  ||| |||||||||||| |||||||||| ||||||||||||||||||||     
T  20054688 gaaccgaatcacaccggaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctata 20054589  T
Q  372 tcaacaagatgcgtcttc 389  Q
    |||||||||||| |||||    
T  20054588 tcaacaagatgcatcttc 20054571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 272 - 389
Target Start/End: Complemental strand, 20055144 - 20055027
Alignment:
Q  272 gaaccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatg 371  Q
    |||||||||| ||  |||||||||||| || ||| | |||| |||||||  ||| |||||||||||| |||||||||| ||||||||||||||||||||     
T  20055144 gaaccgaatcacaccggaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctata 20055045  T
Q  372 tcaacaagatgcgtcttc 389  Q
    |||||||||||| |||||    
T  20055044 tcaacaagatgcatcttc 20055027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 272 - 389
Target Start/End: Complemental strand, 20055600 - 20055483
Alignment:
Q  272 gaaccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatg 371  Q
    |||||||||| ||  |||||||||||| || ||| | |||| |||||||  ||| |||||||||||| |||||||||| ||||||||||||||||||||     
T  20055600 gaaccgaatcacaccggaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctata 20055501  T
Q  372 tcaacaagatgcgtcttc 389  Q
    |||||||||||| |||||    
T  20055500 tcaacaagatgcatcttc 20055483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 272 - 389
Target Start/End: Complemental strand, 20056056 - 20055939
Alignment:
Q  272 gaaccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatg 371  Q
    |||||||||| ||  |||||||||||| || ||| | |||| |||||||  ||| |||||||||||| |||||||||| ||||||||||||||||||||     
T  20056056 gaaccgaatcacaccggaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctata 20055957  T
Q  372 tcaacaagatgcgtcttc 389  Q
    |||||||||||| |||||    
T  20055956 tcaacaagatgcatcttc 20055939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 272 - 389
Target Start/End: Complemental strand, 20056512 - 20056395
Alignment:
Q  272 gaaccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatg 371  Q
    |||||||||| ||  |||||||||||| || ||| | |||| |||||||  ||| |||||||||||| |||||||||| ||||||||||||||||||||     
T  20056512 gaaccgaatcacaccggaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctata 20056413  T
Q  372 tcaacaagatgcgtcttc 389  Q
    |||||||||||| |||||    
T  20056412 tcaacaagatgcatcttc 20056395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 272 - 389
Target Start/End: Complemental strand, 20057415 - 20057298
Alignment:
Q  272 gaaccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatg 371  Q
    |||||||||| ||  |||||||||||| || ||| | |||| |||||||  ||| |||||||||||| |||||||||| ||||||||||||||||||||     
T  20057415 gaaccgaatcacaccggaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctata 20057316  T
Q  372 tcaacaagatgcgtcttc 389  Q
    |||||||||||| |||||    
T  20057315 tcaacaagatgcatcttc 20057298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 288 - 389
Target Start/End: Complemental strand, 20061327 - 20061226
Alignment:
Q  288 gaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgcgtct 387  Q
    |||||||||||||| ||| |||||| |||||||  ||| |||||||||||| | |||||||| |||||||||||||||||||| |||||||||||| |||    
T  20061327 gaatgagagggatcctgaggtcgtgcaggtatgggactgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatct 20061228  T
Q  388 tc 389  Q
    ||    
T  20061227 tc 20061226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 277 - 389
Target Start/End: Complemental strand, 35759755 - 35759643
Alignment:
Q  277 gaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaac 376  Q
    ||||| ||| ||||||||||||||| ||| | |||| |||||||  ||| |||||||||||| | |||||||| |||||||||||||||||||| |||||    
T  35759755 gaatcacatcggaatgagagggatcctgaggccgtgcaggtatgggactgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaac 35759656  T
Q  377 aagatgcgtcttc 389  Q
    ||||||| |||||    
T  35759655 aagatgcatcttc 35759643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 272 - 391
Target Start/End: Original strand, 38340900 - 38341019
Alignment:
Q  272 gaaccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatg 371  Q
    |||||||||| ||  ||||||||| || || ||| | |||| |||||||  ||| |||||||||||| |||||||||| ||||||||||||||||||||     
T  38340900 gaaccgaatcacaccggaatgagatggttcctgaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctata 38340999  T
Q  372 tcaacaagatgcgtcttcat 391  Q
    |||||||||||| |||||||    
T  38341000 tcaacaagatgcatcttcat 38341019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 277 - 383
Target Start/End: Original strand, 7548090 - 7548196
Alignment:
Q  277 gaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaac 376  Q
    ||||| ||||| ||||||||||||||||| | ||||||||||||| |||||||| || |||| || ||||||| |||||||||||| || |||| |||||    
T  7548090 gaatcacattgcaatgagagggatcatgaggccgtgtaggtatgagactacatgattaaaggaagacttataaaaattgtttggtattaactatatcaac 7548189  T
Q  377 aagatgc 383  Q
    |||||||    
T  7548190 aagatgc 7548196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 220 - 389
Target Start/End: Complemental strand, 50003282 - 50003110
Alignment:
Q  220 agtggtcgtcggtgcacaagatataataatgagc---ttccgacagtttttgaatgaaccgaatcgcattggaatgagagggatcatgaagtcgtgtagg 316  Q
    |||||||||||||||| |||  || |||||| ||   | ||||||| || | || |||||||||| ||| ||||||||||||||| ||| | | || |||    
T  50003282 agtggtcgtcggtgcaaaaggcatgataatgtgcggctcccgacagcttctaaaggaaccgaatcacatcggaatgagagggatcctgaggccatgcagg 50003183  T
Q  317 tatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgcgtcttc 389  Q
    |||   ||| ||||||| ||||||| ||||||||||||||| |||||||||||| |||||||||||| |||||    
T  50003182 tataggactgcatggttaaagggagacttataataattgttgggtactacctatatcaacaagatgcatcttc 50003110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 276 - 389
Target Start/End: Complemental strand, 16452081 - 16451968
Alignment:
Q  276 cgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaa 375  Q
    |||||| ||| ||||||||||||||| ||| | | |||||||| |  |||||||||||||||| | |||||||| ||||||| |||||||||||| ||||    
T  16452081 cgaatcacatcggaatgagagggatcctgaggccttgtaggtaggggactacatggttgaaggaaagcttataagaattgttgggtactacctatatcaa 16451982  T
Q  376 caagatgcgtcttc 389  Q
    |||||||| |||||    
T  16451981 caagatgcatcttc 16451968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 276 - 389
Target Start/End: Complemental strand, 16461234 - 16461121
Alignment:
Q  276 cgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaa 375  Q
    |||||| ||| ||||||||||||||| ||| | | |||||||| |  |||||||||||||||| | |||||||| ||||||| |||||||||||| ||||    
T  16461234 cgaatcacatcggaatgagagggatcctgaggccttgtaggtaggggactacatggttgaaggaaagcttataagaattgttgggtactacctatatcaa 16461135  T
Q  376 caagatgcgtcttc 389  Q
    |||||||| |||||    
T  16461134 caagatgcatcttc 16461121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 272 - 389
Target Start/End: Complemental strand, 20845813 - 20845696
Alignment:
Q  272 gaaccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatg 371  Q
    |||||||||| ||  ||||||||| || || ||| | |||| |||||||| ||| |||||||||||| |||||||||| ||||||||| ||||||||||     
T  20845813 gaaccgaatcacaccggaatgagacggttcctgaggccgtgcaggtatgagactgcatggttgaaggaaggcttataagaattgtttgttactacctata 20845714  T
Q  372 tcaacaagatgcgtcttc 389  Q
    |||||||||||| |||||    
T  20845713 tcaacaagatgcatcttc 20845696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 277 - 382
Target Start/End: Original strand, 23180729 - 23180834
Alignment:
Q  277 gaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaac 376  Q
    ||||| ||||||||||||||||||| ||||| |||||||| |||  ||||| |||||||||| | | |||||| ||||| |||||||||||||| |||||    
T  23180729 gaatcacattggaatgagagggatcttgaagccgtgtaggaatgggactacgtggttgaaggaatgattataagaattgcttggtactacctatatcaac 23180828  T
Q  377 aagatg 382  Q
    ||||||    
T  23180829 aagatg 23180834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 288 - 389
Target Start/End: Complemental strand, 31822799 - 31822698
Alignment:
Q  288 gaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgcgtct 387  Q
    |||||||||||||||||| | ||||||||||||| |||||||||||||||| ||  |||||| |||| ||||||||||| ||| ||||||| |||| |||    
T  31822799 gaatgagagggatcatgaggccgtgtaggtatgagactacatggttgaaggaagatttataagaattatttggtactacatatatcaacaatatgcatct 31822700  T
Q  388 tc 389  Q
    ||    
T  31822699 tc 31822698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 272 - 389
Target Start/End: Complemental strand, 43057216 - 43057100
Alignment:
Q  272 gaaccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatg 371  Q
    |||||||||| |||  ||||||| |||||| | | | ||||||||||||  |||||||||||||||| ||||||| || ||||||||| ||||||||||     
T  43057216 gaaccgaatcacatcagaatgag-gggatcctaaggccgtgtaggtatgtgactacatggttgaaggaaggcttagaagaattgtttgatactacctata 43057118  T
Q  372 tcaacaagatgcgtcttc 389  Q
    |||||||||||| |||||    
T  43057117 tcaacaagatgcatcttc 43057100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 277 - 389
Target Start/End: Original strand, 2328314 - 2328426
Alignment:
Q  277 gaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaac 376  Q
    ||||| ||||||||||||||  || |||| | |||  |||||||  ||| |||||||||||| |||||||||| |||||||||||||||||||| | |||    
T  2328314 gaatcacattggaatgagagaaattatgaggccgtacaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatattaac 2328413  T
Q  377 aagatgcgtcttc 389  Q
    ||||||| |||||    
T  2328414 aagatgcatcttc 2328426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 289 - 389
Target Start/End: Complemental strand, 20057854 - 20057754
Alignment:
Q  289 aatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgcgtctt 388  Q
    |||||||||| || ||| | |||| |||||||  ||| |||||||||| | |||||||||| |||||||||||||||||||| |||||||||||| ||||    
T  20057854 aatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatctt 20057755  T
Q  389 c 389  Q
    |    
T  20057754 c 20057754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 276 - 389
Target Start/End: Original strand, 2634922 - 2635035
Alignment:
Q  276 cgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaa 375  Q
    |||||| ||| ||||||||||||||||||| || ||| |||||||  ||| ||||||||||||    || |||| ||||||||||||||||||||  |||    
T  2634922 cgaatcacatcggaatgagagggatcatgaggttgtgcaggtatgggactgcatggttgaaggataactcataagaattgtttggtactacctataccaa 2635021  T
Q  376 caagatgcgtcttc 389  Q
    |||||||| |||||    
T  2635022 caagatgcatcttc 2635035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 272 - 389
Target Start/End: Complemental strand, 30873102 - 30872985
Alignment:
Q  272 gaaccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatg 371  Q
    |||||||||| ||  ||||||||||||||  ||| | |||| |||||||| |||  ||||||||||| || ||| ||| ||||||||| ||||||||||     
T  30873102 gaaccgaatcacaccggaatgagagggattctgaggccgtgcaggtatgagactgtatggttgaaggaagacttttaagaattgtttgatactacctata 30873003  T
Q  372 tcaacaagatgcgtcttc 389  Q
    |||||||||||| |||||    
T  30873002 tcaacaagatgcatcttc 30872985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 328 - 389
Target Start/End: Complemental strand, 46693831 - 46693770
Alignment:
Q  328 atggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgcgtcttc 389  Q
    ||||||||||| |||||||||| |||||||||||||||||||| |||||||||||| |||||    
T  46693831 atggttgaaggaaggcttataaaaattgtttggtactacctatatcaacaagatgcatcttc 46693770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 270 - 381
Target Start/End: Original strand, 10820584 - 10820695
Alignment:
Q  270 atgaaccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactaccta 369  Q
    |||||||||||| ||| ||| |||||||||| |||| |  ||||| ||||   |||||||||||||||| ||  |||||| |||||||||||||||||||    
T  10820584 atgaaccgaatcacatcggagtgagagggattatgaggcggtgtatgtattggactacatggttgaaggaagatttataagaattgtttggtactaccta 10820683  T
Q  370 tgtcaacaagat 381  Q
    | |||| |||||    
T  10820684 tatcaataagat 10820695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 314 - 381
Target Start/End: Original strand, 16907270 - 16907337
Alignment:
Q  314 aggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagat 381  Q
    |||||||| ||| |||||||||| | |||||||||| |||||||||||||||||||| ||||||||||    
T  16907270 aggtatgaaactgcatggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagat 16907337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 330 - 389
Target Start/End: Complemental strand, 20056910 - 20056851
Alignment:
Q  330 ggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgcgtcttc 389  Q
    ||||||||| |||||||| | |||||||||||||||||||| |||||||||||| |||||    
T  20056910 ggttgaaggaaggcttatgagaattgtttggtactacctatatcaacaagatgcatcttc 20056851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 273 - 389
Target Start/End: Original strand, 12727986 - 12728103
Alignment:
Q  273 aaccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttgg-tactacctatg 371  Q
    ||||||||| ||||| ||||| ||||||  |||    |||||||||||  || ||||||||||||| || ||||||| |||||||||| |||| |||||     
T  12727986 aaccgaatcacattgaaatgaaagggattctgagactgtgtaggtatgggacaacatggttgaaggaagacttataagaattgtttggttactgcctata 12728085  T
Q  372 tcaacaagatgcgtcttc 389  Q
    |||||||||||| |||||    
T  12728086 tcaacaagatgcatcttc 12728103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 333 - 389
Target Start/End: Complemental strand, 20060431 - 20060375
Alignment:
Q  333 tgaagggaggcttataataattgtttggtactacctatgtcaacaagatgcgtcttc 389  Q
    |||||| | |||||||| |||||||||||||||||||| |||||||||||| |||||    
T  20060431 tgaaggaaagcttataagaattgtttggtactacctatatcaacaagatgcatcttc 20060375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 328 - 388
Target Start/End: Complemental strand, 51372970 - 51372910
Alignment:
Q  328 atggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgcgtctt 388  Q
    ||||||||||| |||||||||| |||||||| ||||||||||| || ||||||||| ||||    
T  51372970 atggttgaaggaaggcttataagaattgtttagtactacctatatcgacaagatgcatctt 51372910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 272 - 383
Target Start/End: Original strand, 12883518 - 12883629
Alignment:
Q  272 gaaccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatg 371  Q
    |||||||||| ||  ||||||||| |||||  || |  ||| |||||||  ||| |||| ||||||| |  ||||||| ||||||||||||||||||||     
T  12883518 gaaccgaatcacaccggaatgagatggatcccgaggctgtgcaggtatgggactgcatgattgaaggaatacttataagaattgtttggtactacctata 12883617  T
Q  372 tcaacaagatgc 383  Q
    ||||||||||||    
T  12883618 tcaacaagatgc 12883629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 284 - 383
Target Start/End: Complemental strand, 843073 - 842974
Alignment:
Q  284 attggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgc 383  Q
    |||| |||||||||||||||||  |||||||||||||   || |||| ||||||| || | | ||| ||||||||||||||| | ||  |||||||||||    
T  843073 attgaaatgagagggatcatgagatcgtgtaggtatgtgtctgcatgattgaaggaagtcgtgtaagaattgtttggtactatccattccaacaagatgc 842974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 73; Significance: 3e-33; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 277 - 389
Target Start/End: Complemental strand, 6747745 - 6747633
Alignment:
Q  277 gaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaac 376  Q
    ||||| ||||||||||||||||||| ||| | ||||||||||||| |||||||||||||||| ||| |||||| |||||||||||||||||||| |||||    
T  6747745 gaatcacattggaatgagagggatcctgaggccgtgtaggtatgatactacatggttgaaggaaggattataagaattgtttggtactacctatatcaac 6747646  T
Q  377 aagatgcgtcttc 389  Q
    ||||||| |||||    
T  6747645 aagatgcatcttc 6747633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 272 - 389
Target Start/End: Complemental strand, 6719226 - 6719109
Alignment:
Q  272 gaaccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatg 371  Q
    |||||||||| ||||||||||||||||||| ||| |  |||||||||||  |||||||||||||||| | |||||||| ||||||||||||||||||||     
T  6719226 gaaccgaatcacattggaatgagagggatcctgaggctgtgtaggtatgggactacatggttgaaggaatgcttataagaattgtttggtactacctata 6719127  T
Q  372 tcaacaagatgcgtcttc 389  Q
    |||||||||||| |||||    
T  6719126 tcaacaagatgcatcttc 6719109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 272 - 389
Target Start/End: Original strand, 42515538 - 42515655
Alignment:
Q  272 gaaccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatg 371  Q
    |||||||||| |||  |||||||||||||| ||| | ||||||||||||| |||||||||||||||| |||||||||| || |||||||||||||||||     
T  42515538 gaaccgaatcacatcagaatgagagggatcctgaggccgtgtaggtatgagactacatggttgaaggaaggcttataagaagtgtttggtactacctata 42515637  T
Q  372 tcaacaagatgcgtcttc 389  Q
    |||||||||||| |||||    
T  42515638 tcaacaagatgcatcttc 42515655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 276 - 389
Target Start/End: Original strand, 28495852 - 28495965
Alignment:
Q  276 cgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaa 375  Q
    |||||| ||| ||||||||||||||| ||| | ||||||||||||  |||||||||||||||| |||||||||| || |||| |||||||||||| ||||    
T  28495852 cgaatcacatcggaatgagagggatcttgaggccgtgtaggtatgggactacatggttgaaggaaggcttataagaactgttgggtactacctatatcaa 28495951  T
Q  376 caagatgcgtcttc 389  Q
    |||||||| |||||    
T  28495952 caagatgcatcttc 28495965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 272 - 378
Target Start/End: Complemental strand, 26957709 - 26957603
Alignment:
Q  272 gaaccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatg 371  Q
    |||||||||| ||| ||||||||||||||| ||| |  |||||||||||  |||||||||||||| | |||||||||| ||||||||||||||||||||     
T  26957709 gaaccgaatcacatcggaatgagagggatcttgaggctgtgtaggtatggaactacatggttgaaagaaggcttataagaattgtttggtactacctata 26957610  T
Q  372 tcaacaa 378  Q
    |||||||    
T  26957609 tcaacaa 26957603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 273 - 389
Target Start/End: Complemental strand, 29039171 - 29039055
Alignment:
Q  273 aaccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgt 372  Q
    ||||||||| ||| ||||||||||| ||| ||| | ||||||| ||||  |||||||||||||| ||||||||| || |||||||||||||||||||| |    
T  29039171 aaccgaatcacatcggaatgagaggcatcctgaggccgtgtagatatgtgactacatggttgaatggaggcttacaagaattgtttggtactacctatat 29039072  T
Q  373 caacaagatgcgtcttc 389  Q
    |||||| |||| |||||    
T  29039071 caacaacatgcatcttc 29039055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 287 - 389
Target Start/End: Complemental strand, 35474258 - 35474156
Alignment:
Q  287 ggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgcgtc 386  Q
    ||||||||||||||| | | ||||||||||||||| |||||||||||||||  || ||||||| |||||||| ||||||| ||| |||||||||||| ||    
T  35474258 ggaatgagagggatccttaggtcgtgtaggtatgagactacatggttgaagaaagacttataagaattgtttagtactacttatatcaacaagatgcatc 35474159  T
Q  387 ttc 389  Q
    |||    
T  35474158 ttc 35474156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 287 - 389
Target Start/End: Original strand, 36422261 - 36422363
Alignment:
Q  287 ggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgcgtc 386  Q
    ||||||||||||||| | | | | ||||||||||  |||||||||||||||| |||||||||| ||||||| |||||||||||| |||||||||||| ||    
T  36422261 ggaatgagagggatcctaaggccttgtaggtatgggactacatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatc 36422360  T
Q  387 ttc 389  Q
    |||    
T  36422361 ttc 36422363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 277 - 383
Target Start/End: Original strand, 42515091 - 42515197
Alignment:
Q  277 gaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaac 376  Q
    ||||| ||| ||||||||||||||| ||| | |||| |||||||| ||| |||| ||||||| || ||||||| |||||||||||||||||||| |||||    
T  42515091 gaatcacatcggaatgagagggatcctgaggccgtgcaggtatgagactgcatgattgaaggaagacttataagaattgtttggtactacctatatcaac 42515190  T
Q  377 aagatgc 383  Q
    |||||||    
T  42515191 aagatgc 42515197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 272 - 389
Target Start/End: Original strand, 2193250 - 2193367
Alignment:
Q  272 gaaccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatg 371  Q
    |||||||||| ||  |||||||||||| || |||   |||| |||||||  ||| |||||||||||| |||||||||| ||||||||||||||||||||     
T  2193250 gaaccgaatcacaccggaatgagagggttcctgagaccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctata 2193349  T
Q  372 tcaacaagatgcgtcttc 389  Q
    |||||||||||| |||||    
T  2193350 tcaacaagatgcatcttc 2193367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 272 - 389
Target Start/End: Complemental strand, 2611804 - 2611687
Alignment:
Q  272 gaaccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatg 371  Q
    |||| ||||| ||| |||||||||||| || ||| ||| ||||||||||| |||| ||||| ||||| |||||||||| ||||||||||||||| ||||     
T  2611804 gaactgaatcacatcggaatgagaggggtcctgaggtcatgtaggtatgagactatatggtggaaggaaggcttataagaattgtttggtactatctata 2611705  T
Q  372 tcaacaagatgcgtcttc 389  Q
     ||||||||||| |||||    
T  2611704 acaacaagatgcatcttc 2611687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 276 - 389
Target Start/End: Complemental strand, 28495756 - 28495643
Alignment:
Q  276 cgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaa 375  Q
    |||||| ||| ||||||||||||||| ||| ||||||||||||||  |||||||||||||||| || ||||||| |||||||  ||  ||||||| ||||    
T  28495756 cgaatcccatcggaatgagagggatcctgaggtcgtgtaggtatgggactacatggttgaaggaagacttataagaattgttgagttttacctatatcaa 28495657  T
Q  376 caagatgcgtcttc 389  Q
    |||||||| |||||    
T  28495656 caagatgcatcttc 28495643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 272 - 389
Target Start/End: Complemental strand, 34405743 - 34405626
Alignment:
Q  272 gaaccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatg 371  Q
    |||||||||| ||  ||||||||||||||| | | | | ||||||||||  |||||||||||||||| |||||||||| ||||||| ||||||||||||     
T  34405743 gaaccgaatcacaccggaatgagagggatcctaaggccttgtaggtatgggactacatggttgaaggaaggcttataagaattgttgggtactacctata 34405644  T
Q  372 tcaacaagatgcgtcttc 389  Q
    |||||| ||||| |||||    
T  34405643 tcaacaggatgcatcttc 34405626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 288 - 383
Target Start/End: Original strand, 679827 - 679921
Alignment:
Q  288 gaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgc 383  Q
    |||||||||||||| ||| ||||||||||||||  | ||||||| |||||| |||||||||| ||||| |||||||||||||| ||||||||||||    
T  679827 gaatgagagggatcctgaggtcgtgtaggtatgggagtacatggctgaaggaaggcttataagaattg-ttggtactacctatatcaacaagatgc 679921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 287 - 389
Target Start/End: Complemental strand, 13125273 - 13125171
Alignment:
Q  287 ggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgcgtc 386  Q
    ||||||||||||||| ||| | | || |||||||  ||| |||||||||||| |||||||||| |||||||||||||||||||| | |||||||||| ||    
T  13125273 ggaatgagagggatcttgaggccctgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatattaacaagatgcatc 13125174  T
Q  387 ttc 389  Q
    |||    
T  13125173 ttc 13125171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 275 - 389
Target Start/End: Original strand, 46425738 - 46425852
Alignment:
Q  275 ccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtca 374  Q
    ||||||| ||| ||||||||||||||| |||   | ||||||||||  ||||||||||||||   |||||||||| |||||||||||| ||||||| |||    
T  46425738 ccgaatcacatcggaatgagagggatcctgagaccatgtaggtatgggactacatggttgaaataaggcttataagaattgtttggtattacctatatca 46425837  T
Q  375 acaagatgcgtcttc 389  Q
    ||||||||| |||||    
T  46425838 acaagatgcatcttc 46425852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 288 - 389
Target Start/End: Complemental strand, 2941893 - 2941792
Alignment:
Q  288 gaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgcgtct 387  Q
    |||||||||||||| ||| | |||  |||||||  ||| |||||||||||| ||||| |||| |||||||||||||||||||| |||||||||||| |||    
T  2941893 gaatgagagggatcctgaggccgtacaggtatgggactgcatggttgaaggaaggctgataagaattgtttggtactacctatatcaacaagatgcatct 2941794  T
Q  388 tc 389  Q
    ||    
T  2941793 tc 2941792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 277 - 389
Target Start/End: Original strand, 9124958 - 9125070
Alignment:
Q  277 gaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaac 376  Q
    ||||| ||| |||||||||| |||| ||| | |||| |||||||| |||  |||||| |||| | |||||||| |||||||||||||||||||| |||||    
T  9124958 gaatcacatcggaatgagagagatcttgaggccgtgcaggtatgagactgtatggttaaaggaaagcttataagaattgtttggtactacctatatcaac 9125057  T
Q  377 aagatgcgtcttc 389  Q
    ||||||| |||||    
T  9125058 aagatgcatcttc 9125070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 272 - 388
Target Start/End: Original strand, 43233407 - 43233523
Alignment:
Q  272 gaaccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatg 371  Q
    |||||||||| ||  | ||||||||||||||||| | ||||||||||||  |||  |||||| |||| || ||||||| ||||||||||||||| ||||     
T  43233407 gaaccgaatcacaccgaaatgagagggatcatgaggccgtgtaggtatgtgactgtatggttaaaggaagacttataagaattgtttggtactatctata 43233506  T
Q  372 tcaacaagatgcgtctt 388  Q
    |||||||||||| ||||    
T  43233507 tcaacaagatgcatctt 43233523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 323 - 389
Target Start/End: Original strand, 2465778 - 2465844
Alignment:
Q  323 actacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgcgtcttc 389  Q
    |||||||||||||||| |||||||||| | |||||||||||||||||| |||||||||||| |||||    
T  2465778 actacatggttgaaggaaggcttataagagttgtttggtactacctatatcaacaagatgcatcttc 2465844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 311 - 389
Target Start/End: Original strand, 2465957 - 2466035
Alignment:
Q  311 tgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgcgtcttc 389  Q
    ||||||||||  |||||||||||||||| |||||||||| | |||||||||||||||||| |||||||| ||| |||||    
T  2465957 tgtaggtatgggactacatggttgaaggaaggcttataagagttgtttggtactacctatatcaacaagttgcatcttc 2466035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 277 - 383
Target Start/End: Complemental strand, 11517535 - 11517430
Alignment:
Q  277 gaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaac 376  Q
    ||||| ||| ||||||||||||||| ||| | |||  |||||||  ||| |||||| ||||| |||||||||| |||||||||||||||||||| |||||    
T  11517535 gaatcacatcggaatgagagggatcctgaggccgtacaggtatgggactgcatggt-gaaggaaggcttataagaattgtttggtactacctatatcaac 11517437  T
Q  377 aagatgc 383  Q
    |||||||    
T  11517436 aagatgc 11517430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 288 - 389
Target Start/End: Complemental strand, 22529371 - 22529270
Alignment:
Q  288 gaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgcgtct 387  Q
    |||||||||||||| ||| ||| |||| |||||   ||||||||||||||| |||||||||| || |||||||||||| |||| | |||||||||| |||    
T  22529371 gaatgagagggatcctgaggtcatgtaagtatgggcctacatggttgaaggaaggcttataagaaatgtttggtactatctatataaacaagatgcatct 22529272  T
Q  388 tc 389  Q
    ||    
T  22529271 tc 22529270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 284 - 368
Target Start/End: Complemental strand, 13124841 - 13124757
Alignment:
Q  284 attggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacct 368  Q
    |||||||||||||||||| ||| | |||| |||||||  ||| |||||||||||| |||||||||| |||||| |||||||||||    
T  13124841 attggaatgagagggatcttgaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtgtggtactacct 13124757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 277 - 388
Target Start/End: Complemental strand, 5406735 - 5406624
Alignment:
Q  277 gaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaac 376  Q
    ||||| ||| ||||||| ||||||| | ||||||||  ||||||  ||| |||||||||||| ||  |||||| |||||||||||| ||||||| |||||    
T  5406735 gaatcacatcggaatgatagggatcctaaagtcgtgccggtatgggactgcatggttgaaggaagatttataagaattgtttggtattacctatatcaac 5406636  T
Q  377 aagatgcgtctt 388  Q
    ||||||| ||||    
T  5406635 aagatgcatctt 5406624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 272 - 389
Target Start/End: Original strand, 2189138 - 2189255
Alignment:
Q  272 gaaccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatg 371  Q
    |||||||||| ||  |||||||||||| || ||| |  ||| |||| ||  ||| |||||||||| | |||||||||| |||||||||| |||||||||     
T  2189138 gaaccgaatcacaccggaatgagagggttcctgaggctgtgcaggtgtgggactgcatggttgaaagaaggcttataagaattgtttggcactacctata 2189237  T
Q  372 tcaacaagatgcgtcttc 389  Q
    |||||||||||| |||||    
T  2189238 tcaacaagatgcatcttc 2189255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 316 - 381
Target Start/End: Original strand, 25182399 - 25182464
Alignment:
Q  316 gtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagat 381  Q
    |||||| ||| |||||||||||| || ||||||| |||||||||||||||||||| ||||||||||    
T  25182399 gtatgagactgcatggttgaaggaagacttataagaattgtttggtactacctatatcaacaagat 25182464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 288 - 389
Target Start/End: Complemental strand, 29357592 - 29357491
Alignment:
Q  288 gaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgcgtct 387  Q
    |||||||||| |||  || |||||| |||||||  ||| |||||||||||| | | |||||| ||||||||||||||| |||| |||||||||||| |||    
T  29357592 gaatgagaggtatcccgaggtcgtgcaggtatgggactgcatggttgaaggaatgtttataagaattgtttggtactaactatatcaacaagatgcatct 29357493  T
Q  388 tc 389  Q
    ||    
T  29357492 tc 29357491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 309 - 370
Target Start/End: Complemental strand, 16811961 - 16811900
Alignment:
Q  309 cgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctat 370  Q
    ||||||||||||| |||||||||||||||| | |||||||| |||||||| |||||| ||||    
T  16811961 cgtgtaggtatgagactacatggttgaaggaatgcttataagaattgttttgtactatctat 16811900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 316 - 389
Target Start/End: Complemental strand, 36015519 - 36015446
Alignment:
Q  316 gtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgcgtcttc 389  Q
    |||||| ||| |||||||||||| | ||||| || |||||||||||||||| ||| |||||||||||| |||||    
T  36015519 gtatgagactccatggttgaaggaaagcttaaaagaattgtttggtactacatatatcaacaagatgcctcttc 36015446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 277 - 389
Target Start/End: Original strand, 18833285 - 18833397
Alignment:
Q  277 gaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaac 376  Q
    ||||| ||| |||||||||||| || ||| | |||  |||||||  ||| ||||||||| || | |||||||  |||||||| ||||||||||| |||||    
T  18833285 gaatcacatcggaatgagagggttcctgaggccgtacaggtatggaactgcatggttgagggaaagcttatatgaattgtttagtactacctatatcaac 18833384  T
Q  377 aagatgcgtcttc 389  Q
    ||||||| |||||    
T  18833385 aagatgcatcttc 18833397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 289 - 389
Target Start/End: Complemental strand, 31743959 - 31743859
Alignment:
Q  289 aatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgcgtctt 388  Q
    ||||||| ||||| |||| ||||| | | |||| ||| |||||||||||| | |||||||| ||| ||||||| ||| |||| |||||||||||| ||||    
T  31743959 aatgagatggatcttgaaatcgtgcaagcatgagactgcatggttgaaggaatgcttataagaatggtttggtgctatctatatcaacaagatgcatctt 31743860  T
Q  389 c 389  Q
    |    
T  31743859 c 31743859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 272 - 362
Target Start/End: Complemental strand, 3305464 - 3305374
Alignment:
Q  272 gaaccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggta 362  Q
    |||||||||| ||| | |||||| |||||| ||| | |||||| |||||  |||||||||||||| | |||||||| | ||||||||||||    
T  3305464 gaaccgaatcacatcgaaatgagggggatcctgaggccgtgtaagtatgggactacatggttgaatgaaggcttatgagaattgtttggta 3305374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 329 - 383
Target Start/End: Complemental strand, 35527216 - 35527162
Alignment:
Q  329 tggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgc 383  Q
    |||||||| | |||||||||| ||||||||||| |||||||| ||||||||||||    
T  35527216 tggttgaaagaaggcttataagaattgtttggtgctacctatatcaacaagatgc 35527162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 311 - 368
Target Start/End: Original strand, 11372484 - 11372541
Alignment:
Q  311 tgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacct 368  Q
    ||||||||||| | |  ||||||||||| |||||||||| ||||||||||||||||||    
T  11372484 tgtaggtatgaaattgtatggttgaaggaaggcttataagaattgtttggtactacct 11372541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 389
Target Start/End: Original strand, 1628721 - 1628824
Alignment:
Q  283 cattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatg 382  Q
    ||||||||||||||||||  ||||| |||| || ||||  | | |||||||||||  ||||||||||   ||||||||||||| | || |||||||||||    
T  1628721 cattggaatgagagggatgttgaagccgtgcagatatgggattgcatggttgaagaaaggcttataa---ttgtttggtactatcgatatcaacaagatg 1628817  T
Q  383 cgtcttc 389  Q
    | |||||    
T  1628818 catcttc 1628824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 389
Target Start/End: Original strand, 9623203 - 9623319
Alignment:
Q  273 aaccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgt 372  Q
    ||||||||| || ||||||||||||||||  || || ||| | | |||| ||| |||||| |||||    ||||||| ||||||||| ||| |||||| |    
T  9623203 aaccgaatcacaatggaatgagagggatccagaggttgtgcatgcatgagactccatggtagaaggagtacttataagaattgtttgataccacctatat 9623302  T
Q  373 caacaagatgcgtcttc 389  Q
    ||||||||||| |||||    
T  9623303 caacaagatgcatcttc 9623319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 328 - 383
Target Start/End: Complemental strand, 26421401 - 26421346
Alignment:
Q  328 atggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgc 383  Q
    ||||||||||| || ||||||| ||||| ||| |||||||||| ||||||||||||    
T  26421401 atggttgaaggaagacttataagaattgcttgatactacctatatcaacaagatgc 26421346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 72; Significance: 1e-32; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 276 - 383
Target Start/End: Complemental strand, 6465058 - 6464951
Alignment:
Q  276 cgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaa 375  Q
    |||||| ||||||||||||||| ||||||| | ||||||||||||  |||||||||||||||| |||||||||| |||||||||||||||||||| ||||    
T  6465058 cgaatcacattggaatgagaggaatcatgaggccgtgtaggtatggaactacatggttgaaggaaggcttataagaattgtttggtactacctatatcaa 6464959  T
Q  376 caagatgc 383  Q
    ||||||||    
T  6464958 caagatgc 6464951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 272 - 383
Target Start/End: Original strand, 2044052 - 2044163
Alignment:
Q  272 gaaccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatg 371  Q
    |||| ||||| ||| ||||||||||||||| ||| |  |||||||||||| |||||||||||||||| |||||||||| ||||||||| ||||||||||     
T  2044052 gaacagaatcacatcggaatgagagggatcctgaggctgtgtaggtatgagactacatggttgaaggaaggcttataagaattgtttgatactacctata 2044151  T
Q  372 tcaacaagatgc 383  Q
    ||||||||||||    
T  2044152 tcaacaagatgc 2044163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 272 - 383
Target Start/End: Complemental strand, 8080494 - 8080383
Alignment:
Q  272 gaaccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatg 371  Q
    |||| ||||| ||| ||||||||||||||| ||||| ||||||||||||  |||||||||||||||| | ||| |||| ||||||||||||||||||||     
T  8080494 gaactgaatcacatcggaatgagagggatcctgaagccgtgtaggtatgggactacatggttgaaggaaagctgataagaattgtttggtactacctata 8080395  T
Q  372 tcaacaagatgc 383  Q
    ||||||||||||    
T  8080394 tcaacaagatgc 8080383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 273 - 389
Target Start/End: Complemental strand, 27819397 - 27819281
Alignment:
Q  273 aaccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgt 372  Q
    ||||||||| |||  |||||||||||||||||||||| || | |||||| ||| |||||||||||| ||||| |||| |||||||||||||||||||| |    
T  27819397 aaccgaatcacatcagaatgagagggatcatgaagtcatgcaagtatgagacttcatggttgaaggaaggctaataagaattgtttggtactacctatat 27819298  T
Q  373 caacaagatgcgtcttc 389  Q
    |||||| |||| |||||    
T  27819297 caacaaaatgcatcttc 27819281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 275 - 388
Target Start/End: Complemental strand, 27022487 - 27022374
Alignment:
Q  275 ccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtca 374  Q
    ||||||| ||| ||||||||||||||| ||| | | ||||||||||  |||||||||||||| | |||||||||| |||||||||||||||||||| |||    
T  27022487 ccgaatcacatcggaatgagagggatcttgaggccatgtaggtatgggactacatggttgaaagaaggcttataagaattgtttggtactacctatatca 27022388  T
Q  375 acaagatgcgtctt 388  Q
    |||| |||| ||||    
T  27022387 acaacatgcatctt 27022374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 272 - 389
Target Start/End: Complemental strand, 41659257 - 41659140
Alignment:
Q  272 gaaccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatg 371  Q
    |||||||||| ||  |||||||||||| || ||| |||||| |||||||  ||| |||||||||||| || ||||||| ||||||||||||||||||||     
T  41659257 gaaccgaatcacaccggaatgagagggttcctgatgtcgtgcaggtatgggactgcatggttgaaggaagacttataagaattgtttggtactacctata 41659158  T
Q  372 tcaacaagatgcgtcttc 389  Q
    |||||||||||| |||||    
T  41659157 tcaacaagatgcatcttc 41659140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 287 - 389
Target Start/End: Complemental strand, 12827391 - 12827289
Alignment:
Q  287 ggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgcgtc 386  Q
    ||||||||||||||| ||| | | ||||||||||  ||||| |||||||||| |||||||||| ||||||| |||||||||||| |||||||||||| ||    
T  12827391 ggaatgagagggatcctgaggccttgtaggtatgggactacttggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatc 12827292  T
Q  387 ttc 389  Q
    |||    
T  12827291 ttc 12827289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 272 - 389
Target Start/End: Original strand, 10844877 - 10844994
Alignment:
Q  272 gaaccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatg 371  Q
    |||||||||| ||  |||||||||||| || ||| | |||| |||||||  ||| |||||||||||| | |||||||| ||||||||||||||||||||     
T  10844877 gaaccgaatcacaccggaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaaggaaagcttataagaattgtttggtactacctata 10844976  T
Q  372 tcaacaagatgcgtcttc 389  Q
    |||||||||||| |||||    
T  10844977 tcaacaagatgcatcttc 10844994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 272 - 389
Target Start/End: Original strand, 22026373 - 22026490
Alignment:
Q  272 gaaccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatg 371  Q
    |||||||||| ||  |||||||||||| || ||| | |||| |||||||  ||| |||||||||| | |||||||||| ||||||||||||||||||||     
T  22026373 gaaccgaatcacaccggaatgagagggttcgtgaggccgtgcaggtatgggactgcatggttgaatgaaggcttataagaattgtttggtactacctata 22026472  T
Q  372 tcaacaagatgcgtcttc 389  Q
    |||||||||||| |||||    
T  22026473 tcaacaagatgcatcttc 22026490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 287 - 388
Target Start/End: Original strand, 22705181 - 22705282
Alignment:
Q  287 ggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgcgtc 386  Q
    ||||||||||||||| ||||| ||||||||||||  |||  ||| ||||||| ||| |||||| |||||||||||||||||||| |||||||||||| ||    
T  22705181 ggaatgagagggatcctgaagccgtgtaggtatgggactggatgattgaaggaagggttataagaattgtttggtactacctatatcaacaagatgcatc 22705280  T
Q  387 tt 388  Q
    ||    
T  22705281 tt 22705282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 288 - 389
Target Start/End: Complemental strand, 27022015 - 27021914
Alignment:
Q  288 gaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgcgtct 387  Q
    |||||||||||||| ||| | | ||||||||| | ||| |||||||||||| |||||||||| |||||||||||||||| ||| |||||||||||| |||    
T  27022015 gaatgagagggatcctgaggccatgtaggtataagactgcatggttgaaggaaggcttataagaattgtttggtactacttatatcaacaagatgcatct 27021916  T
Q  388 tc 389  Q
    ||    
T  27021915 tc 27021914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 272 - 389
Target Start/End: Original strand, 27925893 - 27926010
Alignment:
Q  272 gaaccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatg 371  Q
    |||||||||| ||  |||||||||||| || ||| | |||| |||||||  ||| |||||||||||| ||| |||||| ||||||||||||||||||||     
T  27925893 gaaccgaatcacaccggaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaaggaaggattataagaattgtttggtactacctata 27925992  T
Q  372 tcaacaagatgcgtcttc 389  Q
    |||||||||||| |||||    
T  27925993 tcaacaagatgcatcttc 27926010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 289 - 389
Target Start/End: Complemental strand, 28375189 - 28375089
Alignment:
Q  289 aatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgcgtctt 388  Q
    ||||||||||||| ||| | |||| |||||||| ||| |||| ||||||| |||||||||| |||||||||||||||||||  |||||||||||| ||||    
T  28375189 aatgagagggatcctgaggccgtgcaggtatgagactgcatgattgaaggaaggcttataagaattgtttggtactacctacatcaacaagatgcatctt 28375090  T
Q  389 c 389  Q
    |    
T  28375089 c 28375089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 310 - 389
Target Start/End: Original strand, 25147568 - 25147647
Alignment:
Q  310 gtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgcgtcttc 389  Q
    |||||||||||| ||| |||||||||||| |||||||||| ||||||||||| |||||||| |||||||||||| |||||    
T  25147568 gtgtaggtatgagactgcatggttgaaggaaggcttataagaattgtttggtgctacctatatcaacaagatgcatcttc 25147647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 272 - 389
Target Start/End: Complemental strand, 22549147 - 22549030
Alignment:
Q  272 gaaccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatg 371  Q
    |||||||||| ||  |||||||||||  || ||| |  ||| |||||||  ||| |||||||||||| || ||||||| ||||||||||||||||||||     
T  22549147 gaaccgaatcacaccggaatgagaggcttcctgaggctgtgcaggtatgtgactgcatggttgaaggaagacttataagaattgtttggtactacctata 22549048  T
Q  372 tcaacaagatgcgtcttc 389  Q
    |||||||||||| |||||    
T  22549047 tcaacaagatgcatcttc 22549030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 277 - 389
Target Start/End: Complemental strand, 22840676 - 22840564
Alignment:
Q  277 gaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaac 376  Q
    ||||| ||| |||||||||| |||| ||| |   ||||||||||| |||||||||| ||| | || ||||||| ||||||||||||||| |||| |||||    
T  22840676 gaatcacatcggaatgagagagatcctgaggctttgtaggtatgagactacatggtcgaatgaagacttataagaattgtttggtactatctatatcaac 22840577  T
Q  377 aagatgcgtcttc 389  Q
    ||||||| |||||    
T  22840576 aagatgcatcttc 22840564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 277 - 389
Target Start/End: Complemental strand, 34308626 - 34308514
Alignment:
Q  277 gaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaac 376  Q
    ||||| ||| ||||||| ||||||| ||| | |||  | |||||| |||  ||||||||||| |||||||||| || ||||||||||||||||| |||||    
T  34308626 gaatcacatcggaatgaaagggatcctgaggccgtacaagtatgagactgtatggttgaaggaaggcttataagaactgtttggtactacctatatcaac 34308527  T
Q  377 aagatgcgtcttc 389  Q
    ||||||| |||||    
T  34308526 aagatgcatcttc 34308514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 287 - 389
Target Start/End: Complemental strand, 10844752 - 10844650
Alignment:
Q  287 ggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgcgtc 386  Q
    |||||||||||| || ||| | | || |||||||  ||| |||||||||||| |||||||||| | |||||||||||||||||| | |||||||||| ||    
T  10844752 ggaatgagagggttcctgaggccttgcaggtatgggactgcatggttgaaggaaggcttataagagttgtttggtactacctatattaacaagatgcatc 10844653  T
Q  387 ttc 389  Q
    |||    
T  10844652 ttc 10844650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 287 - 389
Target Start/End: Original strand, 17103090 - 17103192
Alignment:
Q  287 ggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgcgtc 386  Q
    |||||||||| |||| ||| | |||  |||||||| ||| |||||||||||| || ||||||| |||||||||||||| ||||| |||||||| ||| ||    
T  17103090 ggaatgagagagatcctgaggccgtacaggtatgagactgcatggttgaaggaagacttataagaattgtttggtactgcctatatcaacaagctgcatc 17103189  T
Q  387 ttc 389  Q
    |||    
T  17103190 ttc 17103192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 287 - 389
Target Start/End: Complemental strand, 22548686 - 22548584
Alignment:
Q  287 ggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgcgtc 386  Q
    |||||||||||| || ||| |  ||| |||||||  ||| |||||||||||| ||  |||||| |||||||||||||||||||| |||||||||||| ||    
T  22548686 ggaatgagagggttcctgaggctgtgcaggtatgtgactgcatggttgaaggaagttttataagaattgtttggtactacctatatcaacaagatgcatc 22548587  T
Q  387 ttc 389  Q
    |||    
T  22548586 ttc 22548584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 288 - 389
Target Start/End: Original strand, 25144782 - 25144883
Alignment:
Q  288 gaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgcgtct 387  Q
    ||||||||| ||||  || |||||| |||||||  | | |||| ||||||| |||||||||| |||||||||||||||||||| ||| |||||||| |||    
T  25144782 gaatgagagagatctcgaggtcgtgcaggtatgggattgcatgattgaaggcaggcttataagaattgtttggtactacctatatcagcaagatgcatct 25144881  T
Q  388 tc 389  Q
    ||    
T  25144882 tc 25144883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 272 - 389
Target Start/End: Original strand, 32292391 - 32292508
Alignment:
Q  272 gaaccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatg 371  Q
    |||||||||| ||  |||||||||||| || ||| | |||| | |||||  ||| |||||||||||| | |||||||| ||||||||||||||| ||||     
T  32292391 gaaccgaatcacaccggaatgagagggttcctgaggccgtgcaagtatgggactgcatggttgaaggaatgcttataagaattgtttggtactatctata 32292490  T
Q  372 tcaacaagatgcgtcttc 389  Q
    |||||||| ||| |||||    
T  32292491 tcaacaagttgcatcttc 32292508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 314 - 389
Target Start/End: Original strand, 12100727 - 12100802
Alignment:
Q  314 aggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgcgtcttc 389  Q
    |||||||| ||| |||||||||||| | |||||||| | |||||||||||||||||| |||| ||||||| |||||    
T  12100727 aggtatgagactgcatggttgaaggcaagcttataagatttgtttggtactacctatatcaataagatgcatcttc 12100802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 288 - 383
Target Start/End: Original strand, 25147977 - 25148072
Alignment:
Q  288 gaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgc 383  Q
    ||||||||||||||  || ||||||||||||||  |||   | |||||||| |||||||||| |||||||||||  ||||||| ||||||||||||    
T  25147977 gaatgagagggatcccgaggtcgtgtaggtatgggactgtgtcgttgaaggaaggcttataagaattgtttggtcttacctatatcaacaagatgc 25148072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 314 - 389
Target Start/End: Original strand, 41913006 - 41913081
Alignment:
Q  314 aggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgcgtcttc 389  Q
    |||||||  ||| |||| ||||| | |||||||||| ||||||||||| |||||||| ||||||||||||||||||    
T  41913006 aggtatgggactgcatgtttgaaagaaggcttataagaattgtttggtgctacctatatcaacaagatgcgtcttc 41913081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 287 - 389
Target Start/End: Original strand, 28453347 - 28453449
Alignment:
Q  287 ggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgcgtc 386  Q
    |||||||||||||||  || |||||| |||||||| ||| |||||||||| | |  ||||||| ||||||||  |||||||||| | |||||||||| ||    
T  28453347 ggaatgagagggatcccgaggtcgtgcaggtatgagacttcatggttgaaagaaaacttataagaattgttttatactacctatattaacaagatgcatc 28453446  T
Q  387 ttc 389  Q
    |||    
T  28453447 ttc 28453449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 277 - 370
Target Start/End: Complemental strand, 34309086 - 34308993
Alignment:
Q  277 gaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctat 370  Q
    ||||| ||| ||||||||||||||| ||| | |||  | |||||| |||  ||||||||||| |||||||||| || |||||||||||||||||    
T  34309086 gaatcacatcggaatgagagggatcctgaggccgtacaagtatgagactgtatggttgaaggaaggcttataagaactgtttggtactacctat 34308993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 256 - 375
Target Start/End: Complemental strand, 29971569 - 29971450
Alignment:
Q  256 ccgacagtttttgaatgaaccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattg 355  Q
    ||||||||||||  | |||| ||||| |||  ||||  || ||||| ||| | ||||||||||||| |||||||||||||||| ||  |||||| |||||    
T  29971569 ccgacagtttttagacgaactgaatcacatcagaattggaaggatcctgaggccgtgtaggtatgagactacatggttgaaggaagatttataagaattg 29971470  T
Q  356 tttggtactacctatgtcaa 375  Q
    |||| ||||| |||| ||||    
T  29971469 tttgatactatctatatcaa 29971450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 288 - 382
Target Start/End: Complemental strand, 33852394 - 33852300
Alignment:
Q  288 gaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatg 382  Q
    ||||||||||||||  ||   |||| |||||||| |||  ||||||||||| |  ||||||| |||||||||||||||||||| | |||||||||    
T  33852394 gaatgagagggatcccgagaccgtgcaggtatgagactgtatggttgaaggaaaacttataagaattgtttggtactacctatattaacaagatg 33852300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 307 - 383
Target Start/End: Original strand, 3744667 - 3744743
Alignment:
Q  307 gtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgc 383  Q
    ||||||||||||||  ||| |||||||||||| || ||||||| |||||||||  |||||||||  |||||| ||||    
T  3744667 gtcgtgtaggtatgggactgcatggttgaaggaagacttataagaattgtttgacactacctataccaacaatatgc 3744743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 314 - 381
Target Start/End: Original strand, 1297043 - 1297110
Alignment:
Q  314 aggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagat 381  Q
    |||||||| ||| |||||||||||  |  ||||||| ||||||||||||||||||||  |||||||||    
T  1297043 aggtatgagactgcatggttgaagtaaaacttataagaattgtttggtactacctataccaacaagat 1297110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 329 - 388
Target Start/End: Complemental strand, 15568100 - 15568041
Alignment:
Q  329 tggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgcgtctt 388  Q
    |||||||||| || ||||||| ||||||||||||  |||||| |||||||||||| ||||    
T  15568100 tggttgaaggaagacttataacaattgtttggtatgacctatatcaacaagatgcatctt 15568041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 326 - 389
Target Start/End: Complemental strand, 15819113 - 15819050
Alignment:
Q  326 acatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgcgtcttc 389  Q
    ||||||||||||| | ||||| || |||||||||||||||| ||| |||||| ||||| |||||    
T  15819113 acatggttgaaggaatgcttagaaaaattgtttggtactacatatatcaacatgatgcatcttc 15819050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 388
Target Start/End: Original strand, 6466770 - 6466820
Alignment:
Q  338 ggaggcttataataattgtttggtactacctatgtcaacaagatgcgtctt 388  Q
    |||| ||||||| ||||||||||||||||||||  ||||||||||| ||||    
T  6466770 ggagacttataaaaattgtttggtactacctataccaacaagatgcatctt 6466820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 342 - 383
Target Start/End: Complemental strand, 21316191 - 21316150
Alignment:
Q  342 gcttataataattgtttggtactacctatgtcaacaagatgc 383  Q
    ||||| || |||||||||||||||||||| ||||||||||||    
T  21316191 gcttaaaagaattgtttggtactacctatatcaacaagatgc 21316150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 273 - 321
Target Start/End: Original strand, 44041885 - 44041933
Alignment:
Q  273 aaccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatga 321  Q
    ||||||||| |||  |||||||||||||||||| || ||||||||||||    
T  44041885 aaccgaatcacatcagaatgagagggatcatgaggttgtgtaggtatga 44041933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 71; Significance: 5e-32; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 275 - 389
Target Start/End: Complemental strand, 20896837 - 20896723
Alignment:
Q  275 ccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtca 374  Q
    ||||||| ||| ||||||||||||||| | | | ||||||||||||| |||||||||||||||| |||||||||| |||||||||||||||||||| |||    
T  20896837 ccgaatcacatcggaatgagagggatccttaggccgtgtaggtatgagactacatggttgaaggaaggcttataagaattgtttggtactacctatatca 20896738  T
Q  375 acaagatgcgtcttc 389  Q
    ||||||||| |||||    
T  20896737 acaagatgcatcttc 20896723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 220 - 389
Target Start/End: Complemental strand, 23986524 - 23986352
Alignment:
Q  220 agtggtcgtcggtgcacaagatataataatgagc---ttccgacagtttttgaatgaaccgaatcgcattggaatgagagggatcatgaagtcgtgtagg 316  Q
    ||||||||||||||||||||  || | |||||||   | ||||||| || |  | |||||||||| ||| |||||||||||||||  || | ||||||||    
T  23986524 agtggtcgtcggtgcacaaggcatgacaatgagcggctcccgacagcttctagaggaaccgaatcacatcggaatgagagggatccggaggccgtgtagg 23986425  T
Q  317 tatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgcgtcttc 389  Q
    ||||  |||||||||||||||| |||||||||| |||||||||||||||||||| | |||||||||| |||||    
T  23986424 tatgggactacatggttgaaggtaggcttataagaattgtttggtactacctatatgaacaagatgcatcttc 23986352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 273 - 388
Target Start/End: Complemental strand, 31821843 - 31821728
Alignment:
Q  273 aaccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgt 372  Q
    ||||||||| ||| ||||||||||||||||||| | | ||||||||||| |||||||||||||||| | |||||||| |||| |||||||||| |||| |    
T  31821843 aaccgaatcacatcggaatgagagggatcatgaggccatgtaggtatgagactacatggttgaaggaatgcttataagaattatttggtactaactatat 31821744  T
Q  373 caacaagatgcgtctt 388  Q
    ||||||||||| ||||    
T  31821743 caacaagatgcatctt 31821728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 275 - 389
Target Start/End: Complemental strand, 6331061 - 6330947
Alignment:
Q  275 ccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtca 374  Q
    ||||||| ||| ||||||||| ||||| ||| | ||||||||||||| |||||||||||||||| || ||||||| |||||||||||||||||||| |||    
T  6331061 ccgaatcacatcggaatgagatggatcctgaggccgtgtaggtatgagactacatggttgaaggaagacttataagaattgtttggtactacctatatca 6330962  T
Q  375 acaagatgcgtcttc 389  Q
    |||| |||| |||||    
T  6330961 acaatatgcatcttc 6330947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 272 - 389
Target Start/End: Original strand, 3652480 - 3652597
Alignment:
Q  272 gaaccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatg 371  Q
    |||||||||| ||| ||||||||||||||| ||| |  |||||||||||  |||||||||||||||| |||||||||| |||||| || ||||||||||     
T  3652480 gaaccgaatcacatcggaatgagagggatcctgaggctgtgtaggtatgggactacatggttgaaggaaggcttataagaattgtctgatactacctata 3652579  T
Q  372 tcaacaagatgcgtcttc 389  Q
    |||||||||||| |||||    
T  3652580 tcaacaagatgcatcttc 3652597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 287 - 389
Target Start/End: Original strand, 13492798 - 13492900
Alignment:
Q  287 ggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgcgtc 386  Q
    ||||||||| ||||| ||| |  ||| |||||||| ||| |||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| ||    
T  13492798 ggaatgagaaggatcctgaggctgtgcaggtatgagactgcatggttgaaggaaggcttataataattgtttggtactacctatatcaacaagatgcatc 13492897  T
Q  387 ttc 389  Q
    |||    
T  13492898 ttc 13492900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 287 - 381
Target Start/End: Complemental strand, 14771856 - 14771762
Alignment:
Q  287 ggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagat 381  Q
    |||||||||||||||  |||| ||||||||||||| ||| |||||||||||| || ||||||| |||||||||||||||||||| ||||||||||    
T  14771856 ggaatgagagggatcccgaagccgtgtaggtatgagactgcatggttgaaggaagacttataagaattgtttggtactacctatatcaacaagat 14771762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 272 - 389
Target Start/End: Original strand, 20850315 - 20850432
Alignment:
Q  272 gaaccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatg 371  Q
    |||||||||| ||  |||||||||||| |||||| | |||| |||||||  ||| |||||||||||| |||||||||| |||||||| |||||||||||     
T  20850315 gaaccgaatcacaccggaatgagagggttcatgaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgttttgtactacctata 20850414  T
Q  372 tcaacaagatgcgtcttc 389  Q
    |||||||||||| |||||    
T  20850415 tcaacaagatgcatcttc 20850432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 289 - 389
Target Start/End: Original strand, 9352073 - 9352173
Alignment:
Q  289 aatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgcgtctt 388  Q
    ||||||||||||| ||| |  |||||||||||| |||||||||| |||||||| ||||||||| |||||||||||||||||| | |||||||||| ||||    
T  9352073 aatgagagggatcctgaggctgtgtaggtatgagactacatggtcgaagggagacttataatatttgtttggtactacctatataaacaagatgcatctt 9352172  T
Q  389 c 389  Q
    |    
T  9352173 c 9352173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 277 - 389
Target Start/End: Original strand, 16519967 - 16520079
Alignment:
Q  277 gaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaac 376  Q
    ||||| ||| ||||||||||||||| ||| |  |||||||||||| |||||||||| ||||| |||||||| | | |||||||||||||||||| |||||    
T  16519967 gaatcacatcggaatgagagggatcctgaggctgtgtaggtatgagactacatggtcgaaggaaggcttatgagatttgtttggtactacctatatcaac 16520066  T
Q  377 aagatgcgtcttc 389  Q
    ||||||| |||||    
T  16520067 aagatgcatcttc 16520079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 277 - 389
Target Start/End: Complemental strand, 20126329 - 20126217
Alignment:
Q  277 gaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaac 376  Q
    ||||| ||| ||||||||||||||| | | |  |||||||||||| |||||||||||||||| |||||||||| ||| ||||| |||||||||| |||||    
T  20126329 gaatcacatcggaatgagagggatcctaaggctgtgtaggtatgagactacatggttgaaggaaggcttataagaatggtttgatactacctatatcaac 20126230  T
Q  377 aagatgcgtcttc 389  Q
    ||||||| |||||    
T  20126229 aagatgcatcttc 20126217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 274 - 383
Target Start/End: Complemental strand, 9440459 - 9440350
Alignment:
Q  274 accgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtc 373  Q
    |||||||| ||| ||||||||||||||| |||||||||| |||||||  ||| |||||||||| | | |||||||| ||||||| |||||||| ||| ||    
T  9440459 accgaatcacatcggaatgagagggatcctgaagtcgtgcaggtatggaactgcatggttgaatgaaagcttataagaattgttcggtactacttatatc 9440360  T
Q  374 aacaagatgc 383  Q
    ||||||||||    
T  9440359 aacaagatgc 9440350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 288 - 389
Target Start/End: Original strand, 21311981 - 21312082
Alignment:
Q  288 gaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgcgtct 387  Q
    ||||||||||| |||||| |  ||| |||||||| ||| |||||||||||| |||||||||| ||||||| |||||||||||| |||||||||||| |||    
T  21311981 gaatgagagggttcatgaggctgtgcaggtatgagactgcatggttgaaggaaggcttataagaattgttaggtactacctatatcaacaagatgcatct 21312080  T
Q  388 tc 389  Q
    ||    
T  21312081 tc 21312082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 310 - 389
Target Start/End: Original strand, 11062317 - 11062396
Alignment:
Q  310 gtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgcgtcttc 389  Q
    |||||||||||| |||||||||||||||| |||||||||| || ||||| ||||||||||| |||||||||||| |||||    
T  11062317 gtgtaggtatgaaactacatggttgaaggaaggcttataagaagtgttttgtactacctatatcaacaagatgcatcttc 11062396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 278 - 381
Target Start/End: Complemental strand, 17027677 - 17027574
Alignment:
Q  278 aatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaaca 377  Q
    |||| ||| |||||||||||||||  || | |||| |||||||  ||| |||||||||||| |||||||||| |||||||||||||||||||| ||||||    
T  17027677 aatcacatcggaatgagagggatccagaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaaca 17027578  T
Q  378 agat 381  Q
    ||||    
T  17027577 agat 17027574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 277 - 367
Target Start/End: Complemental strand, 9440575 - 9440485
Alignment:
Q  277 gaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacc 367  Q
    ||||| ||| ||||||||||||||| |||||||||| |||||||  ||| |||||||||| | |||||||||| |||||||||||||||||    
T  9440575 gaatcacatcggaatgagagggatcctgaagtcgtgcaggtatgggacttcatggttgaatgaaggcttataagaattgtttggtactacc 9440485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 311 - 389
Target Start/End: Complemental strand, 13191626 - 13191548
Alignment:
Q  311 tgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgcgtcttc 389  Q
    ||||||||||  ||| |||||||||||| |||||||||| |||||||||||||||||||| |||||||||||| |||||    
T  13191626 tgtaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 13191548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 287 - 382
Target Start/End: Original strand, 27334170 - 27334265
Alignment:
Q  287 ggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatg 382  Q
    |||| ||||||| || ||| |||||| |||||||  ||| |||||||||||| | |||||||| |||||||||||||||||||| |||||||||||    
T  27334170 ggaacgagagggttcctgaggtcgtgcaggtatggaactgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatg 27334265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 287 - 382
Target Start/End: Original strand, 27394910 - 27395005
Alignment:
Q  287 ggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatg 382  Q
    |||| ||||||| || ||| |||||| |||||||  ||| |||||||||||| | |||||||| |||||||||||||||||||| |||||||||||    
T  27394910 ggaacgagagggttcctgaggtcgtgcaggtatggaactgcatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaagatg 27395005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 287 - 389
Target Start/End: Original strand, 23776450 - 23776552
Alignment:
Q  287 ggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgcgtc 386  Q
    ||||||||||| ||| ||| | | ||||||||||  |||||||||||||||| || ||||||| ||| || ||||||||||||| |||||||||||| ||    
T  23776450 ggaatgagaggtatcctgaggccttgtaggtatgggactacatggttgaaggaagacttataagaatcgtctggtactacctatatcaacaagatgcatc 23776549  T
Q  387 ttc 389  Q
    |||    
T  23776550 ttc 23776552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 272 - 389
Target Start/End: Complemental strand, 2681368 - 2681251
Alignment:
Q  272 gaaccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatg 371  Q
    |||||||||| ||  |||||||||||| || ||| | ||||||||| ||  ||| |||||||||| | || ||||||| ||||||||||||||||| ||     
T  2681368 gaaccgaatcacaccggaatgagagggttcctgaggccgtgtaggtttgggactgcatggttgaatgaagacttataagaattgtttggtactacccata 2681269  T
Q  372 tcaacaagatgcgtcttc 389  Q
    |||||||||||| |||||    
T  2681268 tcaacaagatgcatcttc 2681251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 287 - 380
Target Start/End: Complemental strand, 2720701 - 2720608
Alignment:
Q  287 ggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaaga 380  Q
    |||||||||||||||   | |||||| |||||||| ||| |||||||||||| || ||||||| |||||||||||||||||||| | |||||||    
T  2720701 ggaatgagagggatcccaaggtcgtgcaggtatgagactgcatggttgaaggaagacttataagaattgtttggtactacctatattaacaaga 2720608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 277 - 389
Target Start/End: Original strand, 7911877 - 7911989
Alignment:
Q  277 gaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaac 376  Q
    ||||| ||| |||||||||||||||  || | |||| ||||||   ||| |||||||||||| |  ||||||| |||||||||||||||||||| |||||    
T  7911877 gaatcacatcggaatgagagggatctcgaggccgtgcaggtataggactgcatggttgaaggaaaacttataagaattgtttggtactacctatatcaac 7911976  T
Q  377 aagatgcgtcttc 389  Q
    ||||||| |||||    
T  7911977 aagatgcatcttc 7911989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 277 - 381
Target Start/End: Complemental strand, 17731260 - 17731156
Alignment:
Q  277 gaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaac 376  Q
    ||||| ||| ||||||||||||||| ||| | |||  |||||||  ||| ||||||| |||| || ||||||| |||||||||||||||||||| |||||    
T  17731260 gaatcacatcggaatgagagggatcctgaggccgttcaggtatgggactgcatggttaaaggaagacttataagaattgtttggtactacctatatcaac 17731161  T
Q  377 aagat 381  Q
    |||||    
T  17731160 aagat 17731156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 277 - 383
Target Start/End: Original strand, 7912309 - 7912415
Alignment:
Q  277 gaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaac 376  Q
    ||||| ||| |||||||||||||||  || | |||| |||||||  ||| |||||||||||| |  ||||||  |||||||||||||||||||| |||||    
T  7912309 gaatcacatcggaatgagagggatctcgaggccgtgcaggtatgggactgcatggttgaaggaaaacttatatgaattgtttggtactacctatatcaac 7912408  T
Q  377 aagatgc 383  Q
    |||||||    
T  7912409 aagatgc 7912415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 289 - 389
Target Start/End: Original strand, 20735706 - 20735806
Alignment:
Q  289 aatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgcgtctt 388  Q
    ||||||||||||| |||    |||||||||||  |||||||| ||| ||| |||||||||| ||||||||| |||||| ||| |||||||||||| ||||    
T  20735706 aatgagagggatcttgagactgtgtaggtatgtgactacatgattgtaggaaggcttataagaattgtttgatactacttatatcaacaagatgcatctt 20735805  T
Q  389 c 389  Q
    |    
T  20735806 c 20735806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 283 - 370
Target Start/End: Original strand, 32292890 - 32292977
Alignment:
Q  283 cattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctat 370  Q
    ||||||||||||||  ||| | |  ||||| |||||||| ||| |||||||||| | |||||||||| ||||||||||||||||||||    
T  32292890 cattggaatgagagaaatccttagatcgtgcaggtatgagactgcatggttgaatgaaggcttataagaattgtttggtactacctat 32292977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 323 - 389
Target Start/End: Original strand, 15929627 - 15929693
Alignment:
Q  323 actacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgcgtcttc 389  Q
    |||||||||||||| | |||||||||| |||| ||||||||||||||| ||||||| |||| |||||    
T  15929627 actacatggttgaatgaaggcttataagaattatttggtactacctatatcaacaaaatgcatcttc 15929693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 276 - 389
Target Start/End: Complemental strand, 2890986 - 2890874
Alignment:
Q  276 cgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaa 375  Q
    |||||| |||| |||||||||| |||  || | |||| |||||||  ||| |||||||||||| ||| |||||| ||||||| || ||||||||| ||||    
T  2890986 cgaatcacattagaatgagagg-atcccgaggccgtgcaggtatgggactgcatggttgaaggaaggtttataagaattgttagggactacctatatcaa 2890888  T
Q  376 caagatgcgtcttc 389  Q
     ||||||| |||||    
T  2890887 aaagatgcttcttc 2890874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 272 - 389
Target Start/End: Original strand, 17850912 - 17851029
Alignment:
Q  272 gaaccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatg 371  Q
    |||||||||| ||  ||||||||||||||| ||| |||||| | |||||  ||| ||||||| || | | ||| |||| |  ||||||||||||||| |     
T  17850912 gaaccgaatcacaccggaatgagagggatcctgaggtcgtgcaagtatgggactgcatggttaaaagaatgctgataagatatgtttggtactaccttta 17851011  T
Q  372 tcaacaagatgcgtcttc 389  Q
    |||||||||||| |||||    
T  17851012 tcaacaagatgcatcttc 17851029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 272 - 389
Target Start/End: Original strand, 17851368 - 17851485
Alignment:
Q  272 gaaccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatg 371  Q
    |||||||||| ||  |||||||||||||||  || | |||| | |||||  ||| ||||||| || | |||||||||| |  ||||||||||||||| |     
T  17851368 gaaccgaatcacaccggaatgagagggatcccgaggccgtgcaagtatgggactgcatggttaaaagaaggcttataagatatgtttggtactaccttta 17851467  T
Q  372 tcaacaagatgcgtcttc 389  Q
    |||||||||||| |||||    
T  17851468 tcaacaagatgcatcttc 17851485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 276 - 369
Target Start/End: Original strand, 21311513 - 21311606
Alignment:
Q  276 cgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactaccta 369  Q
    |||||| ||| |||||||||||| |||||| | |||  | |||||  ||| |||||||||||| || ||||||| |||||||||||| ||||||    
T  21311513 cgaatcacatcggaatgagagggttcatgaggccgtacaagtatgggactgcatggttgaaggaagccttataagaattgtttggtattaccta 21311606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 287 - 388
Target Start/End: Complemental strand, 28065975 - 28065874
Alignment:
Q  287 ggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgcgtc 386  Q
    ||||||||||||||| | | |||||||||  |||| |||  ||| ||||| | | |||||||| ||||||||||||||| || | |||||||||||| ||    
T  28065975 ggaatgagagggatcctaaggtcgtgtagaaatgagactgtatgattgaatgaaagcttataagaattgtttggtactatctctatcaacaagatgcatc 28065876  T
Q  387 tt 388  Q
    ||    
T  28065875 tt 28065874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 323 - 383
Target Start/End: Complemental strand, 9440958 - 9440898
Alignment:
Q  323 actacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgc 383  Q
    |||||||||||||||| | |||||||| |||| ||||||||||| | | ||||||||||||    
T  9440958 actacatggttgaaggaatgcttataagaattctttggtactacttttatcaacaagatgc 9440898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 314 - 370
Target Start/End: Original strand, 20732614 - 20732670
Alignment:
Q  314 aggtatgacactacatggttgaagggaggcttataataattgtttggtactacctat 370  Q
    |||||||  |||||||||||| ||| |||||||||| |||| |||||||||||||||    
T  20732614 aggtatgtgactacatggttgtaggaaggcttataagaattatttggtactacctat 20732670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 314 - 389
Target Start/End: Original strand, 1991589 - 1991664
Alignment:
Q  314 aggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgcgtcttc 389  Q
    |||||||| |||||||||||| | | ||||||| || |||||||||||| ||| ||| | |||||||||| |||||    
T  1991589 aggtatgagactacatggttggaagaaggcttacaagaattgtttggtattacatatctaaacaagatgcatcttc 1991664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 270 - 349
Target Start/End: Original strand, 3652971 - 3653050
Alignment:
Q  270 atgaaccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataa 349  Q
    ||||||||| || ||| ||||||||||||||| ||| |  |||||||||||  ||| |||||||||| | ||||||||||    
T  3652971 atgaaccgactcacatcggaatgagagggatcctgaggctgtgtaggtatgggactgcatggttgaacgaaggcttataa 3653050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 313 - 383
Target Start/End: Original strand, 15929234 - 15929304
Alignment:
Q  313 taggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgc 383  Q
    ||||||||| |||||| ||||||||  | |||||||| |||||||||||| | ||||| |||| |||||||    
T  15929234 taggtatgagactacaaggttgaagaaaagcttataagaattgtttggtaatgcctatatcaataagatgc 15929304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 389
Target Start/End: Original strand, 13492394 - 13492443
Alignment:
Q  340 aggcttataataattgtttggtactacctatgtcaacaagatgcgtcttc 389  Q
    |||||||||| ||||||||| || ||||||| |||||||||||| |||||    
T  13492394 aggcttataagaattgtttgatattacctatatcaacaagatgcatcttc 13492443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 327 - 380
Target Start/End: Complemental strand, 33775101 - 33775048
Alignment:
Q  327 catggttgaagggaggcttataataattgtttggtactacctatgtcaacaaga 380  Q
    |||||||||||| ||| |||||| |||||| |||| |||||||| |||||||||    
T  33775101 catggttgaaggaaggattataagaattgtctggtgctacctatatcaacaaga 33775048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 70; Significance: 2e-31; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 272 - 389
Target Start/End: Original strand, 3169200 - 3169317
Alignment:
Q  272 gaaccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatg 371  Q
    |||||||||| ||| ||||||||||| ||||||| | ||||||||||||  |||||||||||||||| || ||||||| ||||||||||||||||||||     
T  3169200 gaaccgaatcacatcggaatgagaggaatcatgaggccgtgtaggtatgggactacatggttgaaggaagacttataaaaattgtttggtactacctata 3169299  T
Q  372 tcaacaagatgcgtcttc 389  Q
    |||||||||||| |||||    
T  3169300 tcaacaagatgcatcttc 3169317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 277 - 389
Target Start/End: Complemental strand, 14572291 - 14572179
Alignment:
Q  277 gaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaac 376  Q
    ||||| ||| ||||||||||||||| ||| | | ||||||||||  ||||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  14572291 gaatcacatcggaatgagagggatcctgaggccatgtaggtatgggactacatggttgaagggaggcttataagaattgtttggtactacctatatcaac 14572192  T
Q  377 aagatgcgtcttc 389  Q
    ||||||| |||||    
T  14572191 aagatgcatcttc 14572179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 272 - 388
Target Start/End: Complemental strand, 29628813 - 29628697
Alignment:
Q  272 gaaccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatg 371  Q
    |||||||||| ||| | ||||||||||||| ||| | ||||||||||||| |||||||||||||||| || ||||||| ||||||||||||||||||||     
T  29628813 gaaccgaatcacatcgaaatgagagggatcctgaggccgtgtaggtatgagactacatggttgaaggaagacttataagaattgtttggtactacctata 29628714  T
Q  372 tcaacaagatgcgtctt 388  Q
    ||||||||||| |||||    
T  29628713 tcaacaagatgtgtctt 29628697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 275 - 389
Target Start/End: Complemental strand, 50398681 - 50398567
Alignment:
Q  275 ccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtca 374  Q
    ||||||| ||| ||||||||||||||| ||| | |||||||||||   |||||||||||||||| |||||||||| |||||||||||||||||||| |||    
T  50398681 ccgaatcacatcggaatgagagggatcctgaggccgtgtaggtataggactacatggttgaaggaaggcttataagaattgtttggtactacctatatca 50398582  T
Q  375 acaagatgcgtcttc 389  Q
    ||||||||| |||||    
T  50398581 acaagatgcatcttc 50398567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 272 - 389
Target Start/End: Complemental strand, 21220477 - 21220360
Alignment:
Q  272 gaaccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatg 371  Q
    |||||||||| |||  |||||||||||||||||| | | ||||||||||| |||| ||||||||||| | |||||||| ||||||||||||||||||||     
T  21220477 gaaccgaatcacatcagaatgagagggatcatgaggccatgtaggtatgaaactatatggttgaaggaatgcttataagaattgtttggtactacctata 21220378  T
Q  372 tcaacaagatgcgtcttc 389  Q
    |||||||||||| |||||    
T  21220377 tcaacaagatgcatcttc 21220360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 272 - 389
Target Start/End: Complemental strand, 23942935 - 23942818
Alignment:
Q  272 gaaccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatg 371  Q
    |||||||||| ||| ||||||||||||||| ||  | ||||||||||||  |||||||||||||||| | |||||||| ||||||||||||||||||||     
T  23942935 gaaccgaatcacatcggaatgagagggatcctggggccgtgtaggtatggaactacatggttgaaggaaagcttataagaattgtttggtactacctata 23942836  T
Q  372 tcaacaagatgcgtcttc 389  Q
    |||||||||||| |||||    
T  23942835 tcaacaagatgcatcttc 23942818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 275 - 389
Target Start/End: Complemental strand, 50399136 - 50399022
Alignment:
Q  275 ccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtca 374  Q
    ||||||| ||| ||||||||||||||| |||   ||||||||||||| | |||||||||||||| |||||||||| |||||||||||||||||||| |||    
T  50399136 ccgaatcacatcggaatgagagggatcctgagaccgtgtaggtatgagattacatggttgaaggaaggcttataagaattgtttggtactacctatatca 50399037  T
Q  375 acaagatgcgtcttc 389  Q
    ||| ||||| |||||    
T  50399036 acacgatgcatcttc 50399022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 275 - 381
Target Start/End: Complemental strand, 51331424 - 51331318
Alignment:
Q  275 ccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtca 374  Q
    ||||||| ||| ||||||||||| ||||||| | ||||||||||||  |||||||||||||||| |||||||||| ||||||||||||||| |||| |||    
T  51331424 ccgaatcacatcggaatgagaggaatcatgaggccgtgtaggtatgggactacatggttgaaggaaggcttataagaattgtttggtactatctatatca 51331325  T
Q  375 acaagat 381  Q
    |||||||    
T  51331324 acaagat 51331318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 272 - 389
Target Start/End: Complemental strand, 1645895 - 1645778
Alignment:
Q  272 gaaccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatg 371  Q
    |||||||||| ||| ||||||||||| ||| ||| | ||||||||||||  |||||||||||||||| || ||||||| |||||||||||| |||||||     
T  1645895 gaaccgaatcacatcggaatgagaggaatcttgaggccgtgtaggtatgggactacatggttgaaggaagacttataagaattgtttggtattacctata 1645796  T
Q  372 tcaacaagatgcgtcttc 389  Q
    |||||||||||| |||||    
T  1645795 tcaacaagatgcatcttc 1645778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 272 - 389
Target Start/End: Complemental strand, 4127583 - 4127466
Alignment:
Q  272 gaaccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatg 371  Q
    |||||||||| ||| ||||||||||||||| ||| | | ||||||||||  ||||||| |||||||| || ||||||| ||||||||||||||||||||     
T  4127583 gaaccgaatcacatcggaatgagagggatcctgaggccatgtaggtatgggactacatagttgaaggaagacttataagaattgtttggtactacctata 4127484  T
Q  372 tcaacaagatgcgtcttc 389  Q
    |||||||||||| |||||    
T  4127483 tcaacaagatgcatcttc 4127466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 276 - 389
Target Start/End: Complemental strand, 4128031 - 4127918
Alignment:
Q  276 cgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaa 375  Q
    |||||| ||| ||||||||||||||| ||| | | |||||| |||| |||| ||||||||||| |||||||||| |||||||||||||||||||| ||||    
T  4128031 cgaatcacatcggaatgagagggatcctgaggccatgtaggcatgagactatatggttgaaggaaggcttataagaattgtttggtactacctatatcaa 4127932  T
Q  376 caagatgcgtcttc 389  Q
    |||||||| |||||    
T  4127931 caagatgcatcttc 4127918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 272 - 389
Target Start/End: Complemental strand, 9424004 - 9423887
Alignment:
Q  272 gaaccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatg 371  Q
    |||||||||| ||  ||||||||||||||| ||| |||||| | |||||  ||| |||||||||| | |||||||||||||||||||||||||||||||     
T  9424004 gaaccgaatcacaccggaatgagagggatcctgaggtcgtgcatgtatgggactgcatggttgaaagaaggcttataataattgtttggtactacctata 9423905  T
Q  372 tcaacaagatgcgtcttc 389  Q
    |||||||||||| |||||    
T  9423904 tcaacaagatgcatcttc 9423887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 272 - 367
Target Start/End: Complemental strand, 53854953 - 53854858
Alignment:
Q  272 gaaccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacc 367  Q
    |||||||||| ||| |||||||||||||||||||||  |||||||||||| |||| ||||||||||| || ||||||| |||||||||||||||||    
T  53854953 gaaccgaatcacatcggaatgagagggatcatgaagcagtgtaggtatgagactatatggttgaaggaagacttataagaattgtttggtactacc 53854858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 272 - 389
Target Start/End: Complemental strand, 12692145 - 12692028
Alignment:
Q  272 gaaccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatg 371  Q
    |||||||||| ||  |||||||||||| || ||| | |||| |||||||  ||| |||||||||||| |||||||||| ||||||||||||||||||||     
T  12692145 gaaccgaatcacaccggaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctata 12692046  T
Q  372 tcaacaagatgcgtcttc 389  Q
    |||||||||||| |||||    
T  12692045 tcaacaagatgcatcttc 12692028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 272 - 389
Target Start/End: Complemental strand, 24629579 - 24629462
Alignment:
Q  272 gaaccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatg 371  Q
    |||||||||| ||  |||||||||||| || ||| ||||||||||||||  ||| ||||||| |||| | |||||||| ||||||||||||||||||||     
T  24629579 gaaccgaatcacaccggaatgagagggttcctgaggtcgtgtaggtatgggactgcatggttaaaggaatgcttataagaattgtttggtactacctata 24629480  T
Q  372 tcaacaagatgcgtcttc 389  Q
    |||||||||||| |||||    
T  24629479 tcaacaagatgcatcttc 24629462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 277 - 389
Target Start/End: Complemental strand, 44471466 - 44471354
Alignment:
Q  277 gaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaac 376  Q
    ||||| ||| |||||||||| |||| ||| | |||  |||||||| |||||||||||||||| || ||||||| |||||||||||||||||||| |||||    
T  44471466 gaatcacatcggaatgagagagatcttgaggccgtacaggtatgagactacatggttgaaggaagacttataagaattgtttggtactacctatatcaac 44471367  T
Q  377 aagatgcgtcttc 389  Q
    ||||||| |||||    
T  44471366 aagatgcatcttc 44471354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 309 - 389
Target Start/End: Complemental strand, 14571830 - 14571750
Alignment:
Q  309 cgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgcgtcttc 389  Q
    ||||||||||||  ||| |||||||||||||| |||||||| |||||||||||||||||||| |||||||||||| |||||    
T  14571830 cgtgtaggtatgggacttcatggttgaagggatgcttataagaattgtttggtactacctatatcaacaagatgcatcttc 14571750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 273 - 375
Target Start/End: Complemental strand, 27579054 - 27578952
Alignment:
Q  273 aaccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgt 372  Q
    ||||||||| ||| ||||| ||||||||| | ||||||||||||||||||||||| |||||||  | || ||||||| |||||||||||||||| ||| |    
T  27579054 aaccgaatcacatcggaataagagggatcttaaagtcgtgtaggtatgacactacttggttgactgaagacttataagaattgtttggtactacatatat 27578955  T
Q  373 caa 375  Q
    |||    
T  27578954 caa 27578952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 272 - 389
Target Start/End: Original strand, 1464141 - 1464258
Alignment:
Q  272 gaaccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatg 371  Q
    |||||||||| |||  |||||||||||||||||    ||||||||||||| | ||||| |||||| | |  ||||||| ||||||||||||||||||||     
T  1464141 gaaccgaatcacatcagaatgagagggatcatgcgaccgtgtaggtatgagaatacatagttgaaagaaaacttataagaattgtttggtactacctata 1464240  T
Q  372 tcaacaagatgcgtcttc 389  Q
    |||||||||||| |||||    
T  1464241 tcaacaagatgcatcttc 1464258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 272 - 381
Target Start/End: Complemental strand, 53996261 - 53996152
Alignment:
Q  272 gaaccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatg 371  Q
    |||||||||| ||| ||||||||| ||||| ||| |   ||||| ||||  |||||||||||||||| | |||||||| ||||||||||||||||||||     
T  53996261 gaaccgaatcacatcggaatgagaaggatcctgaggctatgtagatatgggactacatggttgaaggaatgcttataaaaattgtttggtactacctata 53996162  T
Q  372 tcaacaagat 381  Q
    ||||||||||    
T  53996161 tcaacaagat 53996152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 293 - 389
Target Start/End: Complemental strand, 31817523 - 31817427
Alignment:
Q  293 agagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgcgtcttc 389  Q
    ||||||||||||| |||||| | |||||| ||| |||||||||||| | | |||||||||||||||||||||||||||  |||||| |||| |||||    
T  31817523 agagggatcatgaggtcgtgcatgtatgagacttcatggttgaaggaacgtttataataattgtttggtactacctataccaacaaaatgcatcttc 31817427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 294 - 389
Target Start/End: Complemental strand, 7678746 - 7678651
Alignment:
Q  294 gagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgcgtcttc 389  Q
    |||||||| ||| | | ||||||||||   ||||||||||||||| |||||||||| ||||||| |||||||||||| |||||||||||| |||||    
T  7678746 gagggatcttgaggccttgtaggtatggggctacatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatcttc 7678651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 314 - 389
Target Start/End: Complemental strand, 8467904 - 8467829
Alignment:
Q  314 aggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgcgtcttc 389  Q
    |||||||| |||||||||||||||| || ||||||| ||||||||||||||||||||  ||||||||||| |||||    
T  8467904 aggtatgagactacatggttgaaggaagacttataagaattgtttggtactacctataccaacaagatgcatcttc 8467829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 278 - 389
Target Start/End: Original strand, 49998636 - 49998747
Alignment:
Q  278 aatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaaca 377  Q
    |||| ||| ||||||||||||||| | | |  ||||||| |||  ||| |||||||||||| || ||||||| |||||||||||||||||||| ||||||    
T  49998636 aatcacatcggaatgagagggatcctaaggctgtgtaggcatgggactgcatggttgaaggaagacttataagaattgtttggtactacctatatcaaca 49998735  T
Q  378 agatgcgtcttc 389  Q
    |||||| |||||    
T  49998736 agatgcatcttc 49998747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 287 - 389
Target Start/End: Original strand, 21067291 - 21067393
Alignment:
Q  287 ggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgcgtc 386  Q
    |||||||||||||||  || |||||| | |||||| ||| |||||||||||| || || ||||||||| ||||||||||| ||| |||||||||||| ||    
T  21067291 ggaatgagagggatcccgaggtcgtgcatgtatgagactgcatggttgaaggaagactaataataattatttggtactacatatatcaacaagatgcatc 21067390  T
Q  387 ttc 389  Q
    |||    
T  21067391 ttc 21067393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 272 - 389
Target Start/End: Complemental strand, 24629126 - 24629006
Alignment:
Q  272 gaaccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaaggga---ggcttataataattgtttggtactacct 368  Q
    |||||||||| ||  |||||||||||| || ||| | ||||||||||||  ||| ||||||| |||| |   ||||||||| ||||||||||||||||||    
T  24629126 gaaccgaatcacaccggaatgagagggttcctgaggccgtgtaggtatgggactgcatggttaaaggaattaggcttataagaattgtttggtactacct 24629027  T
Q  369 atgtcaacaagatgcgtcttc 389  Q
    || |||||||||||| |||||    
T  24629026 atatcaacaagatgcatcttc 24629006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 277 - 383
Target Start/End: Original strand, 35871627 - 35871733
Alignment:
Q  277 gaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaac 376  Q
    ||||| ||| ||||||||||||||| ||| | |||  |||||||  ||| |||||||||||| |||||||||  ||||||||||||| |||||| |||||    
T  35871627 gaatcacatcggaatgagagggatcctgaggccgtacaggtatgggacttcatggttgaaggaaggcttatatgaattgtttggtaccacctatatcaac 35871726  T
Q  377 aagatgc 383  Q
    |||||||    
T  35871727 aagatgc 35871733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 276 - 389
Target Start/End: Complemental strand, 31817994 - 31817881
Alignment:
Q  276 cgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaa 375  Q
    |||||| ||| ||||| |||||||| |||| ||| || | |||||  ||| |||||||||||| |||||||||| ||||||| ||||||||||||  |||    
T  31817994 cgaatcacatcggaataagagggattatgaggtcatgcatgtatgggactgcatggttgaaggaaggcttataagaattgttcggtactacctataccaa 31817895  T
Q  376 caagatgcgtcttc 389  Q
    |||||||| |||||    
T  31817894 caagatgcatcttc 31817881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 277 - 389
Target Start/End: Complemental strand, 23350424 - 23350312
Alignment:
Q  277 gaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaac 376  Q
    ||||| ||| |||||||||| |||| ||| | |||  ||||| |  ||| |||||||||||| |||||||||| |||||||||||||| ||||| |||||    
T  23350424 gaatcacatcggaatgagagagatcttgaggccgtacaggtaggggactgcatggttgaaggaaggcttataagaattgtttggtacttcctatatcaac 23350325  T
Q  377 aagatgcgtcttc 389  Q
    ||||||| |||||    
T  23350324 aagatgcatcttc 23350312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 277 - 388
Target Start/End: Original strand, 13266085 - 13266196
Alignment:
Q  277 gaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaac 376  Q
    ||||| |||| |||||||||||||| | ||| |||| |||||||  | | |||||||||||| ||||||||||||||| ||| ||||| ||||| ||||     
T  13266085 gaatcacattagaatgagagggatcttaaagccgtgcaggtatgggaatgcatggttgaaggaaggcttataataattttttagtactccctatatcaat 13266184  T
Q  377 aagatgcgtctt 388  Q
    ||||||| ||||    
T  13266185 aagatgcatctt 13266196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 327 - 389
Target Start/End: Original strand, 17628560 - 17628622
Alignment:
Q  327 catggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgcgtcttc 389  Q
    |||||||||||| |||||||||| ||||||||||||||||||||  ||||||||||| |||||    
T  17628560 catggttgaaggtaggcttataagaattgtttggtactacctataccaacaagatgcatcttc 17628622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 288 - 389
Target Start/End: Original strand, 14351805 - 14351906
Alignment:
Q  288 gaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgcgtct 387  Q
    |||||||||||||| ||| |||||| | ||||||  || |||||||||||| |||||| ||| | || |||||||||| |||| |||||||||||| |||    
T  14351805 gaatgagagggatcctgaggtcgtgcatgtatgagtctgcatggttgaaggaaggcttgtaagagttttttggtactatctatatcaacaagatgcatct 14351904  T
Q  388 tc 389  Q
    ||    
T  14351905 tc 14351906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 328 - 389
Target Start/End: Complemental strand, 44470964 - 44470903
Alignment:
Q  328 atggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgcgtcttc 389  Q
    ||||||||| | |||||||||| |||||||||||||||||||| |||||||||||| |||||    
T  44470964 atggttgaaagaaggcttataagaattgtttggtactacctatatcaacaagatgcatcttc 44470903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 314 - 388
Target Start/End: Original strand, 27026539 - 27026613
Alignment:
Q  314 aggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgcgtctt 388  Q
    |||||||  |||||| | ||||||| |||||||||| ||||||||| |||||||||| |||||||||||| ||||    
T  27026539 aggtatgggactacacgattgaaggaaggcttataagaattgtttgatactacctatatcaacaagatgcatctt 27026613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 316 - 369
Target Start/End: Original strand, 44831035 - 44831088
Alignment:
Q  316 gtatgacactacatggttgaagggaggcttataataattgtttggtactaccta 369  Q
    |||||| | |||||||||||||||| |||||||| |||||||||||||||||||    
T  44831035 gtatgagattacatggttgaagggaagcttataaaaattgtttggtactaccta 44831088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 287 - 383
Target Start/End: Original strand, 17029339 - 17029435
Alignment:
Q  287 ggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgc 383  Q
    |||||||||||||||  || |||||| | |||||  ||| ||| |||||| | || ||| |||||||||||| ||||||||||| ||||||||||||    
T  17029339 ggaatgagagggatctagaggtcgtgcaagtatgggactgcatagttgaatgaagacttgtaataattgtttagtactacctatatcaacaagatgc 17029435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 309 - 381
Target Start/End: Original strand, 21067765 - 21067837
Alignment:
Q  309 cgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagat 381  Q
    |||| |||||||  ||| |||||||||||| || ||||||| ||||||||||| |||||||| ||||||||||    
T  21067765 cgtgcaggtatgggactgcatggttgaaggaagacttataagaattgtttggtgctacctatatcaacaagat 21067837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 289 - 389
Target Start/End: Complemental strand, 43929092 - 43928992
Alignment:
Q  289 aatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgcgtctt 388  Q
    |||||||||| || ||||| |||| |||||||| ||||  |||| ||||| | ||||| || |||||||||||||||| |||  ||||||||||| ||||    
T  43929092 aatgagagggttcctgaagccgtgcaggtatgagactatttggtcgaaggaaagcttacaagaattgtttggtactacatataccaacaagatgcatctt 43928993  T
Q  389 c 389  Q
    |    
T  43928992 c 43928992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 326 - 389
Target Start/End: Complemental strand, 23943334 - 23943271
Alignment:
Q  326 acatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgcgtcttc 389  Q
    ||||||||||||| || ||||||| || | ||||||||||||||| |||||||||||| |||||    
T  23943334 acatggttgaaggaagacttataaaaaatatttggtactacctatatcaacaagatgcatcttc 23943271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 310 - 388
Target Start/End: Original strand, 42838655 - 42838733
Alignment:
Q  310 gtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgcgtctt 388  Q
    ||||| |||||| ||||||| ||| |||| || | ||||| |||||||||||||||||||| ||||||| |||| ||||    
T  42838655 gtgtaagtatgagactacatagttcaaggaagacgtataaaaattgtttggtactacctatatcaacaaaatgcatctt 42838733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 389
Target Start/End: Complemental strand, 13614042 - 13613926
Alignment:
Q  273 aaccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgt 372  Q
    ||||||||| || ||||||||||||||||  || || ||| | | |||| ||| |||||| |||||    ||||||| ||||||||| ||| |||||| |    
T  13614042 aaccgaatcacaatggaatgagagggatccagaggttgtgcatgcatgagactccatggtagaaggagtacttataagaattgtttgataccacctatat 13613943  T
Q  373 caacaagatgcgtcttc 389  Q
    ||||||||||| |||||    
T  13613942 caacaagatgcatcttc 13613926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 340 - 388
Target Start/End: Complemental strand, 20306239 - 20306191
Alignment:
Q  340 aggcttataataattgtttggtactacctatgtcaacaagatgcgtctt 388  Q
    |||||||||| ||||||||||||||| |||| |||||||||||| ||||    
T  20306239 aggcttataagaattgtttggtactatctatatcaacaagatgcatctt 20306191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 277 - 388
Target Start/End: Original strand, 17028873 - 17028984
Alignment:
Q  277 gaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaac 376  Q
    ||||| ||| ||||||||||||||| ||||| | || | |||||  ||| ||| ||||||||  |  || ||| ||||||| ||| |||||||| |||||    
T  17028873 gaatcacatcggaatgagagggatcctgaagccttgcatgtatgggactgcatagttgaaggaggatttgtaagaattgttaggtgctacctatatcaac 17028972  T
Q  377 aagatgcgtctt 388  Q
    ||||||||||||    
T  17028973 aagatgcgtctt 17028984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 318 - 389
Target Start/End: Original strand, 27029317 - 27029388
Alignment:
Q  318 atgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgcgtcttc 389  Q
    |||| |||||| | ||||||| || ||||||| |||| ||||||||||| ||| |||||||||||| |||||    
T  27029317 atgagactacacgattgaaggaagacttataagaattatttggtactacttatatcaacaagatgcatcttc 27029388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 288 - 383
Target Start/End: Complemental strand, 26200417 - 26200320
Alignment:
Q  288 gaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagg--gaggcttataataattgtttggtactacctatgtcaacaagatgc 383  Q
    |||||||||||||| |||  | |||||||||||  ||  ||||||||||||  ||||||||||| ||||||||| ||||| ||||   ||||||||||    
T  26200417 gaatgagagggatcctgatattgtgtaggtatgggacatcatggttgaaggaagaggcttataacaattgtttgatactaactatacaaacaagatgc 26200320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 344 - 389
Target Start/End: Complemental strand, 50814899 - 50814854
Alignment:
Q  344 ttataataattgtttggtactacctatgtcaacaagatgcgtcttc 389  Q
    |||||| ||||||||||||||| |||| |||||||||||| |||||    
T  50814899 ttataagaattgtttggtactatctatatcaacaagatgcatcttc 50814854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 69; Significance: 7e-31; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 277 - 389
Target Start/End: Original strand, 245085 - 245197
Alignment:
Q  277 gaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaac 376  Q
    ||||| ||| ||||||||||||||| ||| | | ||||||||||  ||||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  245085 gaatcacatcggaatgagagggatcctgaggccatgtaggtatgggactacatggttgaagggaggcttataagaattgtttggtactacctatatcaac 245184  T
Q  377 aagatgcgtcttc 389  Q
    ||||||| |||||    
T  245185 aagatgcatcttc 245197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 309 - 389
Target Start/End: Original strand, 245546 - 245626
Alignment:
Q  309 cgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgcgtcttc 389  Q
    ||||||||||||  ||| |||||||||||||| |||||||| |||||||||||||||||||| |||||||||||| |||||    
T  245546 cgtgtaggtatgggacttcatggttgaagggatgcttataagaattgtttggtactacctatatcaacaagatgcatcttc 245626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 68; Significance: 3e-30; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 272 - 383
Target Start/End: Complemental strand, 25230857 - 25230746
Alignment:
Q  272 gaaccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatg 371  Q
    ||||| |||| ||||||||||||||||||| ||| | | ||||||||||| |||||||||||||||| ||| |||||| ||||||||||||||||||||     
T  25230857 gaaccaaatcacattggaatgagagggatcctgaggccatgtaggtatgagactacatggttgaaggaaggtttataagaattgtttggtactacctata 25230758  T
Q  372 tcaacaagatgc 383  Q
    ||||||||||||    
T  25230757 tcaacaagatgc 25230746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 272 - 383
Target Start/End: Complemental strand, 25238444 - 25238333
Alignment:
Q  272 gaaccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatg 371  Q
    ||||| |||| ||||||||||||||||||| ||| | | ||||||||||| |||||||||||||||| ||| |||||| ||||||||||||||||||||     
T  25238444 gaaccaaatcacattggaatgagagggatcctgaggccatgtaggtatgagactacatggttgaaggaaggtttataagaattgtttggtactacctata 25238345  T
Q  372 tcaacaagatgc 383  Q
    ||||||||||||    
T  25238344 tcaacaagatgc 25238333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 277 - 389
Target Start/End: Complemental strand, 31284423 - 31284311
Alignment:
Q  277 gaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaac 376  Q
    ||||| ||| ||||||||||||||| ||| |||||| |||||||  ||| |||||||||||| |||||||||| |||||||||||||||||||| |||||    
T  31284423 gaatcacatcggaatgagagggatcttgaggtcgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaac 31284324  T
Q  377 aagatgcgtcttc 389  Q
    ||||||| |||||    
T  31284323 aagatgcatcttc 31284311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 220 - 389
Target Start/End: Original strand, 39640876 - 39641048
Alignment:
Q  220 agtggtcgtcggtgcacaagatataataatga---gcttccgacagtttttgaatgaaccgaatcgcattggaatgagagggatcatgaagtcgtgtagg 316  Q
    ||||||||||||||||||||| || | |||||   ||| ||||||| ||||  | ||| |||||| |||  ||||||||| |||| ||| | ||||||||    
T  39640876 agtggtcgtcggtgcacaagacatgacaatgaacggctcccgacagcttttagaagaatcgaatcacatcagaatgagagagatcctgaggccgtgtagg 39640975  T
Q  317 tatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgcgtcttc 389  Q
    ||||| |||||||||||||||| || ||||||| | |||||||||||||||||| |||| ||||||| |||||    
T  39640976 tatgagactacatggttgaaggaagacttataagagttgtttggtactacctatatcaataagatgcatcttc 39641048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 272 - 389
Target Start/End: Original strand, 14813943 - 14814060
Alignment:
Q  272 gaaccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatg 371  Q
    |||||||||| ||  |||||||||||| || ||| | ||||||||||||| ||| ||||||| |||| |||||||||||||||||||||||||||||||     
T  14813943 gaaccgaatcacaccggaatgagagggttcctgaggccgtgtaggtatgagactgcatggttaaaggaaggcttataataattgtttggtactacctata 14814042  T
Q  372 tcaacaagatgcgtcttc 389  Q
    |||| ||||||| |||||    
T  14814043 tcaataagatgcatcttc 14814060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 272 - 381
Target Start/End: Complemental strand, 25230400 - 25230291
Alignment:
Q  272 gaaccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatg 371  Q
    ||||| |||| ||| |||| |||||||||| ||| ||||||||||||||  |||||||||||||||| |||||||||| |||| |||||||||||||||     
T  25230400 gaaccaaatcacatcggaaggagagggatcctgaggtcgtgtaggtatgggactacatggttgaaggaaggcttataagaattatttggtactacctata 25230301  T
Q  372 tcaacaagat 381  Q
    ||||||||||    
T  25230300 tcaacaagat 25230291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 272 - 381
Target Start/End: Complemental strand, 25237987 - 25237878
Alignment:
Q  272 gaaccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatg 371  Q
    ||||| |||| ||| |||| |||||||||| ||| ||||||||||||||  |||||||||||||||| |||||||||| |||| |||||||||||||||     
T  25237987 gaaccaaatcacatcggaaggagagggatcctgaggtcgtgtaggtatgggactacatggttgaaggaaggcttataagaattatttggtactacctata 25237888  T
Q  372 tcaacaagat 381  Q
    ||||||||||    
T  25237887 tcaacaagat 25237878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 272 - 389
Target Start/End: Original strand, 30529681 - 30529798
Alignment:
Q  272 gaaccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatg 371  Q
    |||| ||||| ||| ||||||||||||||| ||| |  |||||||||||| |||||||||||||||  |||||||||| |||| |||||||||||||||     
T  30529681 gaactgaatcacatcggaatgagagggatcctgaggctgtgtaggtatgagactacatggttgaagtaaggcttataagaattttttggtactacctata 30529780  T
Q  372 tcaacaagatgcgtcttc 389  Q
    |||||||||||| |||||    
T  30529781 tcaacaagatgcatcttc 30529798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 289 - 389
Target Start/End: Complemental strand, 20885252 - 20885152
Alignment:
Q  289 aatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgcgtctt 388  Q
    ||||||||||||| ||| ||||||||||||||  |||||||||||||||| || ||||||| ||||||||| |||||||||| |||||||||||| ||||    
T  20885252 aatgagagggatcttgaggtcgtgtaggtatgtgactacatggttgaaggaagacttataagaattgtttgatactacctatatcaacaagatgcatctt 20885153  T
Q  389 c 389  Q
    |    
T  20885152 c 20885152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 287 - 389
Target Start/End: Complemental strand, 11180171 - 11180069
Alignment:
Q  287 ggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgcgtc 386  Q
    ||||||||||||||| ||| | | ||||||||||  |||||||||||||||| |||||||||| ||||||| |||||||||||| |||||||||||| ||    
T  11180171 ggaatgagagggatcctgaggccttgtaggtatgggactacatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatc 11180072  T
Q  387 ttc 389  Q
    |||    
T  11180071 ttc 11180069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 276 - 389
Target Start/End: Original strand, 16811379 - 16811492
Alignment:
Q  276 cgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaa 375  Q
    |||||| ||| ||||||||||||||| ||| | ||||||||| ||  ||| |||||||||||| |||||||||| ||||||| |||||||||||| ||||    
T  16811379 cgaatcacatcggaatgagagggatcctgaggccgtgtaggtttgggactccatggttgaaggaaggcttataagaattgttgggtactacctatttcaa 16811478  T
Q  376 caagatgcgtcttc 389  Q
    |||||||| |||||    
T  16811479 caagatgcatcttc 16811492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 278 - 381
Target Start/End: Original strand, 7477191 - 7477294
Alignment:
Q  278 aatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaaca 377  Q
    |||| ||| ||||||||||||||| | |||||||| |||||||| ||| |||||||||||| |||||||||| |||| ||||||||||| ||| ||||||    
T  7477191 aatcacatcggaatgagagggatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 7477290  T
Q  378 agat 381  Q
    ||||    
T  7477291 agat 7477294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 278 - 389
Target Start/End: Original strand, 7493881 - 7493992
Alignment:
Q  278 aatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaaca 377  Q
    |||| ||| |||||||||| |||| | |||||||| |||||||| ||| |||||||||||| |||||||||| |||| ||||||||||| ||| ||||||    
T  7493881 aatcacatcggaatgagagagatcctaaagtcgtgcaggtatgagactgcatggttgaaggaaggcttataagaattttttggtactacttatatcaaca 7493980  T
Q  378 agatgcgtcttc 389  Q
    |||||| |||||    
T  7493981 agatgcatcttc 7493992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 287 - 389
Target Start/End: Original strand, 28561755 - 28561857
Alignment:
Q  287 ggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgcgtc 386  Q
    |||||||||||| || ||| | |||| |||||||  ||| |||||||||||| |||||||||| |||||||||||||||||||| |||||||||||| ||    
T  28561755 ggaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatc 28561854  T
Q  387 ttc 389  Q
    |||    
T  28561855 ttc 28561857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 287 - 389
Target Start/End: Original strand, 50347755 - 50347857
Alignment:
Q  287 ggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgcgtc 386  Q
    ||||||||||||||| ||| | | |||| |||||| ||||| |||||||||| |||||||||| ||||||| |||||||||||| |||||||||||| ||    
T  50347755 ggaatgagagggatcctgaggccttgtatgtatgagactacttggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatc 50347854  T
Q  387 ttc 389  Q
    |||    
T  50347855 ttc 50347857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 277 - 389
Target Start/End: Original strand, 41472300 - 41472411
Alignment:
Q  277 gaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaac 376  Q
    ||||| ||| ||||||||||||||| ||| |||||  |||||||| ||| |||||||||||| || ||||||| |||||||||||||||| ||| |||||    
T  41472300 gaatcacatcggaatgagagggatcctgaggtcgtacaggtatgagactgcatggttgaaggaag-cttataagaattgtttggtactacatatatcaac 41472398  T
Q  377 aagatgcgtcttc 389  Q
    ||||||| |||||    
T  41472399 aagatgcatcttc 41472411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 290 - 389
Target Start/End: Complemental strand, 25239211 - 25239112
Alignment:
Q  290 atgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgcgtcttc 389  Q
    |||||||||||  ||| ||||||||||||||  |||| ||||||||||| | |||||||| |||| ||||||||||||||| |||||||||||| |||||    
T  25239211 atgagagggattctgaggtcgtgtaggtatgggactatatggttgaaggaacgcttataagaattttttggtactacctatatcaacaagatgcatcttc 25239112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 287 - 389
Target Start/End: Complemental strand, 13150236 - 13150134
Alignment:
Q  287 ggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgcgtc 386  Q
    |||||||||||| || ||| | | ||||||||||  |||||||||||||||| |||||||||| ||||||| |||||||||| | |||||||||||| ||    
T  13150236 ggaatgagagggctcctgaggccttgtaggtatgggactacatggttgaaggaaggcttataagaattgttgggtactacctgtatcaacaagatgcatc 13150137  T
Q  387 ttc 389  Q
    |||    
T  13150136 ttc 13150134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 283 - 389
Target Start/End: Complemental strand, 25802689 - 25802583
Alignment:
Q  283 cattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatg 382  Q
    ||||||||||||||||||||||  | | ||||||||||| ||| ||||||| | || ||||| |||| ||| |||||||||||||||| |||||||||||    
T  25802689 cattggaatgagagggatcatgtggccatgtaggtatgagactgcatggttaacggaaggctgataagaatggtttggtactacctatatcaacaagatg 25802590  T
Q  383 cgtcttc 389  Q
    | |||||    
T  25802589 catcttc 25802583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 287 - 389
Target Start/End: Complemental strand, 32227358 - 32227256
Alignment:
Q  287 ggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgcgtc 386  Q
    ||||||||||||||| | | | | ||||||||||  |||||||||||||||| |||||||||| ||||||| |||||||||||| | |||||||||| ||    
T  32227358 ggaatgagagggatcctaaggccttgtaggtatgggactacatggttgaaggaaggcttataagaattgttgggtactacctatattaacaagatgcatc 32227259  T
Q  387 ttc 389  Q
    |||    
T  32227258 ttc 32227256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 287 - 389
Target Start/End: Original strand, 32227510 - 32227611
Alignment:
Q  287 ggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgcgtc 386  Q
    ||||||||||||||| ||| | | ||||||||||  |||||||||||||||| |||||||||| ||||||| |||||||||||| | |||||||||| ||    
T  32227510 ggaatgagagggatc-tgaggccttgtaggtatgggactacatggttgaaggaaggcttataagaattgttgggtactacctatattaacaagatgcatc 32227608  T
Q  387 ttc 389  Q
    |||    
T  32227609 ttc 32227611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 311 - 389
Target Start/End: Complemental strand, 32797048 - 32796970
Alignment:
Q  311 tgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgcgtcttc 389  Q
    ||||||||||| |||||||||||||||  || ||||||| |||||||||||||||||||| |||||||||||| |||||    
T  32797048 tgtaggtatgaaactacatggttgaagcaagacttataagaattgtttggtactacctatatcaacaagatgcatcttc 32796970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 323 - 389
Target Start/End: Complemental strand, 13150655 - 13150589
Alignment:
Q  323 actacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgcgtcttc 389  Q
    |||||||||||||||| |||||||||| ||||||| |||||||||||| |||||||||||| |||||    
T  13150655 actacatggttgaaggaaggcttataagaattgttgggtactacctatatcaacaagatgcatcttc 13150589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 272 - 389
Target Start/End: Original strand, 37045029 - 37045146
Alignment:
Q  272 gaaccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatg 371  Q
    |||||||||| |||  |||||||||||||| ||| | ||||||||| ||  ||||||||  |||||| | |||||||| |||||||||||| |||||||     
T  37045029 gaaccgaatcacatctgaatgagagggatcctgaggccgtgtaggtgtgggactacatgaatgaaggaatgcttataagaattgtttggtaatacctata 37045128  T
Q  372 tcaacaagatgcgtcttc 389  Q
    |||||||| ||| |||||    
T  37045129 tcaacaaggtgcatcttc 37045146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 277 - 388
Target Start/End: Original strand, 8067279 - 8067390
Alignment:
Q  277 gaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaac 376  Q
    ||||| ||| ||||||||||||| | ||| | |||| |||||||  | | ||||||||||||  ||||||||| |||||||| ||||||||||| |||||    
T  8067279 gaatcacatcggaatgagagggaccctgaggccgtgcaggtatgggattgcatggttgaaggccggcttataagaattgtttagtactacctatatcaac 8067378  T
Q  377 aagatgcgtctt 388  Q
    ||||||| ||||    
T  8067379 aagatgcatctt 8067390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 287 - 389
Target Start/End: Original strand, 39653173 - 39653275
Alignment:
Q  287 ggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgcgtc 386  Q
    |||||||||||| || ||| | |||| |||||||  ||| |||||||||||| | |||||||| ||||||| | |||||||||| |||||||||||| ||    
T  39653173 ggaatgagagggttcctgaggccgtgcaggtatgggactgcatggttgaaggaaagcttataagaattgttggatactacctatatcaacaagatgcatc 39653272  T
Q  387 ttc 389  Q
    |||    
T  39653273 ttc 39653275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 276 - 389
Target Start/End: Original strand, 16810923 - 16811036
Alignment:
Q  276 cgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaa 375  Q
    |||||| ||| ||||||||||||||| ||| | ||||||| ||||  ||| ||||||||| || |||||||||| |||||||  |||||| |||| || |    
T  16810923 cgaatcacatcggaatgagagggatcttgaggccgtgtagatatgggactgcatggttgatggaaggcttataagaattgttgcgtactaactatatcta 16811022  T
Q  376 caagatgcgtcttc 389  Q
    |||||||| |||||    
T  16811023 caagatgcatcttc 16811036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 288 - 389
Target Start/End: Original strand, 29224334 - 29224435
Alignment:
Q  288 gaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgcgtct 387  Q
    |||||| |||| |||||| | | ||||| ||||| ||| |||||||||||| || ||||||| ||||||||||||||||||||   |||||||||| |||    
T  29224334 gaatgaaagggttcatgaggccatgtagatatgagactgcatggttgaaggaagacttataagaattgtttggtactacctatactaacaagatgcatct 29224433  T
Q  388 tc 389  Q
    ||    
T  29224434 tc 29224435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 328 - 389
Target Start/End: Complemental strand, 32386830 - 32386769
Alignment:
Q  328 atggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgcgtcttc 389  Q
    ||||||||||| |||||||||| |||||||||||||||||||| | |||||||||| |||||    
T  32386830 atggttgaaggaaggcttataagaattgtttggtactacctatattaacaagatgcatcttc 32386769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 277 - 389
Target Start/End: Original strand, 25248110 - 25248222
Alignment:
Q  277 gaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaac 376  Q
    ||||| ||| ||||||||||||||  | | | |||| |||||||  ||| ||||||| |||| | | |||||| |||||||||||||||||||| |||||    
T  25248110 gaatcacatcggaatgagagggattctaaggccgtgcaggtatgggactgcatggttaaaggaatgtttataagaattgtttggtactacctatatcaac 25248209  T
Q  377 aagatgcgtcttc 389  Q
    ||||||| |||||    
T  25248210 aagatgcatcttc 25248222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 277 - 389
Target Start/End: Complemental strand, 27187477 - 27187365
Alignment:
Q  277 gaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaac 376  Q
    ||||| ||||||||||||||||||| ||| |  ||| | |||||  ||| ||||||| || | |||||||||| |||||||||||||||||||| |||      
T  27187477 gaatcacattggaatgagagggatcctgaggctgtgcatgtatgggactgcatggttaaatgaaggcttataagaattgtttggtactacctatatcact 27187378  T
Q  377 aagatgcgtcttc 389  Q
    ||||||| |||||    
T  27187377 aagatgcatcttc 27187365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 330 - 389
Target Start/End: Complemental strand, 4067454 - 4067395
Alignment:
Q  330 ggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgcgtcttc 389  Q
    ||||||||| || ||||||| |||||||||||||||||||| |||||||||||| |||||    
T  4067454 ggttgaaggaagacttataaaaattgtttggtactacctatatcaacaagatgcatcttc 4067395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 318 - 389
Target Start/End: Complemental strand, 25238790 - 25238719
Alignment:
Q  318 atgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgcgtcttc 389  Q
    |||| |||||||||||||||| || ||||||| ||||||||||||||| || | |||||||||||| |||||    
T  25238790 atgagactacatggttgaaggaagacttataagaattgtttggtactatctttatcaacaagatgcatcttc 25238719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 370
Target Start/End: Complemental strand, 25803158 - 25803058
Alignment:
Q  270 atgaaccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactaccta 369  Q
    ||||||||||||  || ||||| |||||| || | | ||||||||||||||  ||| |||||||||||  || ||| ||| |||||||||||||||||||    
T  25803158 atgaaccgaatcatatcggaataagagggttcctaatgtcgtgtaggtatgggactgcatggttgaagtaagacttgtaagaattgtttggtactaccta 25803059  T
Q  370 t 370  Q
    |    
T  25803058 t 25803058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 335 - 388
Target Start/End: Original strand, 14820211 - 14820264
Alignment:
Q  335 aagggaggcttataataattgtttggtactacctatgtcaacaagatgcgtctt 388  Q
    |||| |||||||||| |||||||||||||||| ||| |||||||||||| ||||    
T  14820211 aaggaaggcttataagaattgtttggtactacttatatcaacaagatgcatctt 14820264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 289 - 381
Target Start/End: Original strand, 41474008 - 41474100
Alignment:
Q  289 aatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagat 381  Q
    ||||||||||||| ||| |||||  |||||||  |||  |||||| |||| || ||||||| ||||||||| |||| ||||| ||||||||||    
T  41474008 aatgagagggatcttgaggtcgttcaggtatgtgactggatggttaaaggaagacttataagaattgtttgatacttcctatatcaacaagat 41474100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 288 - 383
Target Start/End: Original strand, 2911105 - 2911200
Alignment:
Q  288 gaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgc 383  Q
    ||||||||||||||  || | |||| |||||||  || ||||||||||| | | | |||||| ||||||||| || ||||||| ||||||||||||    
T  2911105 gaatgagagggatcccgaggccgtgcaggtatgggaccacatggttgaaagaatggttataaaaattgtttgatattacctatatcaacaagatgc 2911200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 276 - 383
Target Start/End: Original strand, 2740 - 2847
Alignment:
Q  276 cgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaa 375  Q
    |||||| ||| | ||||||||||||| ||| | ||||||||||||  |||||||||||||||| |||||||||| ||||||| |||||||||||| ||||    
T  2740 cgaatcacatcgaaatgagagggatcctgaggccgtgtaggtatgggactacatggttgaaggaaggcttataagaattgttgggtactacctatatcaa 2839  T
Q  376 caagatgc 383  Q
    ||||||||    
T  2840 caagatgc 2847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 272 - 388
Target Start/End: Complemental strand, 18286 - 18170
Alignment:
Q  272 gaaccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatg 371  Q
    |||| ||||| ||| ||||||||||||||| ||| | ||||||||||||  ||||||| |||||||| || ||||||| ||||||||| ||||||||||     
T  18286 gaactgaatcacatcggaatgagagggatcctgaggccgtgtaggtatgtgactacatagttgaaggaagacttataagaattgtttgatactacctata 18187  T
Q  372 tcaacaagatgcgtctt 388  Q
    |||||||||||| ||||    
T  18186 tcaacaagatgcatctt 18170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 288 - 382
Target Start/End: Complemental strand, 17734 - 17640
Alignment:
Q  288 gaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatg 382  Q
    |||||||||||||| ||| | ||||||||||||  |||||||||||||||| | |||||||| |||||||||||||||||||| |||||| ||||    
T  17734 gaatgagagggatcctgaggccgtgtaggtatgggactacatggttgaaggaaagcttataagaattgtttggtactacctatatcaacaggatg 17640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 277 - 389
Target Start/End: Complemental strand, 2357 - 2245
Alignment:
Q  277 gaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaac 376  Q
    ||||| ||| ||||||||| ||||| | | | |||| |||||||  |||||||||||||||| |||||||||| |||||||||||||||||||| |||||    
T  2357 gaatcacatcggaatgagaaggatcctaaggccgtgcaggtatgggactacatggttgaaggaaggcttataagaattgtttggtactacctatatcaac 2258  T
Q  377 aagatgcgtcttc 389  Q
    ||||||| |||||    
T  2257 aagatgcatcttc 2245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0499 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: scaffold0499
Description:

Target: scaffold0499; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 288 - 389
Target Start/End: Complemental strand, 2187 - 2086
Alignment:
Q  288 gaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgcgtct 387  Q
    |||||| |||| || ||| | |||| |||||||| ||| |||||||||||| |||||||||| |||||||||||||||||||| |||||||||||| |||    
T  2187 gaatgaaagggttcctgaggccgtgcaggtatgagactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaacaagatgcatct 2088  T
Q  388 tc 389  Q
    ||    
T  2087 tc 2086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 272 - 389
Target Start/End: Original strand, 23667 - 23784
Alignment:
Q  272 gaaccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatg 371  Q
    |||||||||| ||  | |||||||||| || ||| | |||| |||||||  ||| |||||||||||| |||||||||| ||||||||||||||||||||     
T  23667 gaaccgaatcacaccgaaatgagagggttcttgaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctata 23766  T
Q  372 tcaacaagatgcgtcttc 389  Q
    |||||||||||| |||||    
T  23767 tcaacaagatgcatcttc 23784  T

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Target: scaffold0007 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 277 - 389
Target Start/End: Complemental strand, 142421 - 142309
Alignment:
Q  277 gaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaac 376  Q
    ||||| ||| ||||||||||||||| ||| | |||| |||||||  ||| |||||||||||| | | |||||| |||||||||||||||||||| |||||    
T  142421 gaatcacatcggaatgagagggatcctgaggccgtgcaggtatgggacttcatggttgaaggaatgtttataagaattgtttggtactacctatatcaac 142322  T
Q  377 aagatgcgtcttc 389  Q
    ||||||| |||||    
T  142321 aagatgcatcttc 142309  T

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Target: scaffold0322 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 278 - 381
Target Start/End: Original strand, 18966 - 19069
Alignment:
Q  278 aatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaaca 377  Q
    |||| ||| |||||||||||||||  || | |||| |||||||  ||| |||||||||||| |||||||||| |||||||||||||||||||| ||||||    
T  18966 aatcacatcggaatgagagggatccagaggccgtgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctatatcaaca 19065  T
Q  378 agat 381  Q
    ||||    
T  19066 agat 19069  T

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Target: scaffold0002 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 287 - 389
Target Start/End: Original strand, 154766 - 154868
Alignment:
Q  287 ggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgcgtc 386  Q
    |||||||||||| || ||| | | ||||||||||  |||||||||||||||| |||||||||| ||||||| |||||||||| | |||||||||||| ||    
T  154766 ggaatgagagggctcctgaggccttgtaggtatgggactacatggttgaaggaaggcttataagaattgttgggtactacctgtatcaacaagatgcatc 154865  T
Q  387 ttc 389  Q
    |||    
T  154866 ttc 154868  T

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Target: scaffold0024 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 278 - 389
Target Start/End: Original strand, 105720 - 105831
Alignment:
Q  278 aatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaaca 377  Q
    |||| ||| ||||||||||||||| ||| | |||  |||||||  ||| || ||||||||| |||||||||| |||||||||||||||||||| ||||||    
T  105720 aatcacatcggaatgagagggatcctgaggccgtacaggtatggaactgcagggttgaaggaaggcttataagaattgtttggtactacctatatcaaca 105819  T
Q  378 agatgcgtcttc 389  Q
    | |||| |||||    
T  105820 aaatgcatcttc 105831  T

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Target: scaffold0018 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 277 - 388
Target Start/End: Original strand, 10299 - 10410
Alignment:
Q  277 gaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaac 376  Q
    ||||| ||| ||||||||||||||| ||| | |||| | |||||  ||| ||||||| |||| |||||||||| |||||||| ||||||||||| |||||    
T  10299 gaatcacatcggaatgagagggatcctgaggccgtgcatgtatgggactgcatggttcaaggaaggcttataagaattgtttagtactacctatatcaac 10398  T
Q  377 aagatgcgtctt 388  Q
    ||||||| ||||    
T  10399 aagatgcatctt 10410  T

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Target: scaffold0022 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 287 - 389
Target Start/End: Complemental strand, 162815 - 162713
Alignment:
Q  287 ggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgcgtc 386  Q
    ||||||||||||||| ||| | |||  |||||||  ||| |||||||||||| || ||||||| |||||||||||||||||||| | |||||||||| ||    
T  162815 ggaatgagagggatcctgaggccgtacaggtatgtgactgcatggttgaaggaagacttataagaattgtttggtactacctatattaacaagatgcatc 162716  T
Q  387 ttc 389  Q
    |||    
T  162715 ttc 162713  T

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Target: scaffold0022; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 314 - 388
Target Start/End: Complemental strand, 69925 - 69851
Alignment:
Q  314 aggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgcgtctt 388  Q
    |||||||| ||| ||| |||||||| | ||||||||||||||||||||||||||||| |||||| ||||| ||||    
T  69925 aggtatgagactgcatcgttgaaggaatgcttataataattgtttggtactacctatatcaacatgatgcatctt 69851  T

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Target: scaffold0333 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 272 - 389
Target Start/End: Original strand, 4555 - 4672
Alignment:
Q  272 gaaccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatg 371  Q
    |||||||||| ||| |||| ||||||| || ||| | | || |||||||  ||| |||||||||||| ||| ||| || ||||||||||||||||||||     
T  4555 gaaccgaatcacatcggaaggagagggttcctgaggccatgcaggtatgggactgcatggttgaaggaaggtttagaagaattgtttggtactacctata 4654  T
Q  372 tcaacaagatgcgtcttc 389  Q
    |||||||||||| |||||    
T  4655 tcaacaagatgcatcttc 4672  T

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Target: scaffold0243 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 272 - 389
Target Start/End: Original strand, 1214 - 1331
Alignment:
Q  272 gaaccgaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatg 371  Q
    |||||||||| ||  ||||||||| || || ||| | | || |||||||  ||| |||||||||||| |||||||||| ||||||||||||||||||||     
T  1214 gaaccgaatcacaccggaatgagacggttcctgaggccatgcaggtatgggactgcatggttgaaggaaggcttataagaattgtttggtactacctata 1313  T
Q  372 tcaacaagatgcgtcttc 389  Q
    | |||||||||| |||||    
T  1314 taaacaagatgcatcttc 1331  T

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Target: scaffold0020 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 277 - 389
Target Start/End: Complemental strand, 107610 - 107498
Alignment:
Q  277 gaatcgcattggaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaac 376  Q
    ||||| ||| ||||||||||||||  ||| | |||  |||||||  ||| |||||||||||| |||||||||| ||||||||| ||||||| || |||||    
T  107610 gaatcacatcggaatgagagggattctgaggccgtacaggtatgggactgcatggttgaaggaaggcttataagaattgtttgatactaccaatatcaac 107511  T
Q  377 aagatgcgtcttc 389  Q
    ||||||| |||||    
T  107510 aagatgcatcttc 107498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0557 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0557
Description:

Target: scaffold0557; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 323 - 389
Target Start/End: Original strand, 2150 - 2216
Alignment:
Q  323 actacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgcgtcttc 389  Q
    |||||||||||||||| |||||||||| |||||||||||||| ||||| | |||||||||| |||||    
T  2150 actacatggttgaaggaaggcttataagaattgtttggtactccctatataaacaagatgcatcttc 2216  T

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Target: scaffold0664 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 288 - 389
Target Start/End: Complemental strand, 4118 - 4017
Alignment:
Q  288 gaatgagagggatcatgaagtcgtgtaggtatgacactacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgcgtct 387  Q
    ||||||||||||||  || | |||| |||||||  ||| ||| |||||||| | |||||||| |||||||||||||||||| | |||||||||||| |||    
T  4118 gaatgagagggatcccgaggccgtgcaggtatgggactgcattgttgaaggaatgcttataagaattgtttggtactacctgtatcaacaagatgcatct 4019  T
Q  388 tc 389  Q
    ||    
T  4018 tc 4017  T

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Target: scaffold0101 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 323 - 391
Target Start/End: Original strand, 45431 - 45499
Alignment:
Q  323 actacatggttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgcgtcttcat 391  Q
    ||||||| |||||||| || ||||| | |||| ||||||||||||||| |||||||||||  |||||||    
T  45431 actacattgttgaaggaagacttatgagaattatttggtactacctatatcaacaagatgtatcttcat 45499  T

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Target: scaffold0391 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 331 - 383
Target Start/End: Original strand, 14794 - 14846
Alignment:
Q  331 gttgaagggaggcttataataattgtttggtactacctatgtcaacaagatgc 383  Q
    |||||||| | |||||||| |||||||||||| ||||||| |||| |||||||    
T  14794 gttgaaggaatgcttataagaattgtttggtaatacctatatcaataagatgc 14846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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