View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10098_low_41 (Length: 240)
Name: NF10098_low_41
Description: NF10098
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10098_low_41 |
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Alignment Details
Target: chr3 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 20 - 223
Target Start/End: Original strand, 45655641 - 45655844
Alignment:
| Q |
20 |
ttaattcattgacaaagactattcaattttgaatcacagagatgcttgtgcttacaactatcaatttcttttatctgttcagcctcaagttcacaaagag |
119 |
Q |
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| T |
45655641 |
ttaattcattaacaaagactattcaattttgaatcacagagatgcttgtgcttacaactatcaatttcttttatctgttcagcctcaagttcacaaagag |
45655740 |
T |
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| Q |
120 |
acaaactacctgtaaaaacacatcatttaaaccaataaaaaactttgcattattggttagaatgagaaaacattcaaaatgtttgaagcaagggcataca |
219 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
45655741 |
acaaactacctgtaaaaacacatcatttaaaccaataaaaaactttgaattattggttagaatgagaaaacaatcaaaatgtttgaagcaagggcataca |
45655840 |
T |
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| Q |
220 |
acat |
223 |
Q |
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|||| |
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| T |
45655841 |
acat |
45655844 |
T |
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