View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10098_low_42 (Length: 239)

Name: NF10098_low_42
Description: NF10098
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10098_low_42
NF10098_low_42
[»] scaffold0117 (3 HSPs)
scaffold0117 (1-224)||(21897-22122)
scaffold0117 (16-115)||(34565-34665)
scaffold0117 (45-103)||(40122-40182)
[»] chr2 (17 HSPs)
chr2 (5-223)||(24272814-24273032)
chr2 (1-223)||(19802403-19802616)
chr2 (5-223)||(21245734-21245952)
chr2 (11-223)||(26904460-26904672)
chr2 (100-223)||(23376055-23376178)
chr2 (91-223)||(22110662-22110795)
chr2 (5-223)||(28350209-28350423)
chr2 (5-102)||(6477138-6477235)
chr2 (155-223)||(23086582-23086649)
chr2 (5-103)||(23003143-23003242)
chr2 (29-105)||(41300828-41300905)
chr2 (112-223)||(41683765-41683875)
chr2 (112-223)||(44621937-44622047)
chr2 (29-131)||(21072561-21072664)
chr2 (42-84)||(22704067-22704110)
chr2 (116-223)||(12626915-12627024)
chr2 (155-208)||(24161462-24161515)
[»] scaffold0607 (1 HSPs)
scaffold0607 (1-223)||(3842-4065)
[»] chr1 (15 HSPs)
chr1 (5-223)||(18271374-18271591)
chr1 (5-223)||(18276028-18276245)
chr1 (5-223)||(21660423-21660640)
chr1 (64-223)||(21180071-21180232)
chr1 (91-223)||(28203549-28203682)
chr1 (91-223)||(20902261-20902395)
chr1 (1-103)||(13227939-13228040)
chr1 (5-102)||(13527616-13527713)
chr1 (112-223)||(20632323-20632433)
chr1 (112-223)||(22075372-22075482)
chr1 (117-223)||(37359478-37359583)
chr1 (134-223)||(36182604-36182693)
chr1 (29-131)||(28313425-28313527)
chr1 (11-57)||(634952-634996)
chr1 (146-223)||(45495157-45495235)
[»] scaffold0672 (1 HSPs)
scaffold0672 (1-223)||(7249-7472)
[»] scaffold0042 (2 HSPs)
scaffold0042 (1-223)||(67748-67971)
scaffold0042 (5-223)||(52257-52475)
[»] chr8 (21 HSPs)
chr8 (1-223)||(21860322-21860536)
chr8 (5-223)||(15634875-15635093)
chr8 (64-223)||(25657305-25657466)
chr8 (64-223)||(32951000-32951161)
chr8 (91-223)||(15002893-15003026)
chr8 (64-216)||(19883047-19883201)
chr8 (64-223)||(22433404-22433566)
chr8 (27-115)||(22815485-22815574)
chr8 (64-208)||(20387584-20387732)
chr8 (16-105)||(14420299-14420389)
chr8 (5-103)||(24980165-24980264)
chr8 (100-223)||(6607264-6607385)
chr8 (112-223)||(22144389-22144499)
chr8 (27-102)||(45134009-45134086)
chr8 (160-223)||(22815378-22815441)
chr8 (146-223)||(24706812-24706890)
chr8 (116-223)||(10833910-10834019)
chr8 (11-57)||(19883007-19883051)
chr8 (160-193)||(14420436-14420469)
chr8 (4-85)||(17796281-17796361)
chr8 (135-215)||(22058402-22058483)
[»] scaffold0962 (1 HSPs)
scaffold0962 (4-223)||(396-615)
[»] chr5 (23 HSPs)
chr5 (4-223)||(21662923-21663142)
chr5 (1-222)||(17813532-17813745)
chr5 (4-223)||(21979847-21980066)
chr5 (51-223)||(30137771-30137944)
chr5 (127-223)||(22470989-22471085)
chr5 (64-222)||(21553181-21553342)
chr5 (16-115)||(24276384-24276486)
chr5 (16-115)||(24385727-24385829)
chr5 (29-131)||(23539842-23539945)
chr5 (117-223)||(26360111-26360216)
chr5 (27-103)||(22757717-22757796)
chr5 (112-223)||(29324225-29324335)
chr5 (160-223)||(30344475-30344537)
chr5 (27-102)||(43125634-43125711)
chr5 (42-84)||(10817902-10817945)
chr5 (42-84)||(22776989-22777032)
chr5 (4-53)||(17021864-17021913)
chr5 (6-71)||(22827735-22827800)
chr5 (146-223)||(4398746-4398824)
chr5 (4-57)||(21553338-21553389)
chr5 (177-223)||(24276287-24276332)
chr5 (177-223)||(24385881-24385926)
chr5 (7-85)||(27868498-27868575)
[»] chr6 (20 HSPs)
chr6 (1-223)||(24267899-24268122)
chr6 (91-223)||(13765474-13765607)
chr6 (119-220)||(23610777-23610878)
chr6 (64-223)||(1588842-1589002)
chr6 (4-115)||(1589668-1589780)
chr6 (4-189)||(29847093-29847279)
chr6 (27-223)||(1640033-1640229)
chr6 (5-102)||(16132326-16132423)
chr6 (5-102)||(19442938-19443035)
chr6 (5-103)||(21119706-21119804)
chr6 (5-103)||(5109614-5109713)
chr6 (91-223)||(16830779-16830912)
chr6 (29-131)||(29415429-29415532)
chr6 (162-209)||(1589574-1589621)
chr6 (112-223)||(8523937-8524047)
chr6 (4-53)||(14583971-14584020)
chr6 (135-223)||(16103370-16103459)
chr6 (135-223)||(29493781-29493869)
chr6 (137-223)||(12596989-12597076)
chr6 (11-57)||(23225806-23225850)
[»] chr4 (33 HSPs)
chr4 (5-220)||(20898533-20898749)
chr4 (92-223)||(14035872-14036004)
chr4 (5-223)||(16277060-16277279)
chr4 (91-223)||(13882512-13882645)
chr4 (91-223)||(28919804-28919937)
chr4 (5-223)||(15991318-15991536)
chr4 (73-223)||(13878889-13879038)
chr4 (100-223)||(21188754-21188877)
chr4 (64-223)||(33661384-33661545)
chr4 (1-102)||(14049654-14049754)
chr4 (64-223)||(15447176-15447328)
chr4 (1-103)||(30147991-30148092)
chr4 (4-223)||(18230792-18231011)
chr4 (5-102)||(12729747-12729844)
chr4 (11-85)||(14912145-14912217)
chr4 (29-131)||(4830030-4830133)
chr4 (29-131)||(4833325-4833428)
chr4 (117-223)||(15279102-15279207)
chr4 (29-131)||(15747429-15747532)
chr4 (112-223)||(288097-288207)
chr4 (29-105)||(24046378-24046455)
chr4 (155-208)||(3863095-3863148)
chr4 (155-208)||(3871852-3871905)
chr4 (167-223)||(6516267-6516323)
chr4 (27-89)||(31116170-31116234)
chr4 (42-76)||(6512710-6512744)
chr4 (155-209)||(15239621-15239675)
chr4 (155-209)||(16370529-16370583)
chr4 (135-223)||(28383851-28383940)
chr4 (91-201)||(13043595-13043703)
chr4 (112-223)||(13745745-13745855)
chr4 (155-209)||(15413691-15413745)
chr4 (27-102)||(56114662-56114740)
[»] scaffold0008 (1 HSPs)
scaffold0008 (5-223)||(11188-11407)
[»] scaffold0481 (1 HSPs)
scaffold0481 (1-223)||(454-677)
[»] chr7 (38 HSPs)
chr7 (5-223)||(13898524-13898742)
chr7 (5-223)||(15214606-15214824)
chr7 (91-223)||(14190683-14190816)
chr7 (11-223)||(48744588-48744800)
chr7 (91-223)||(16250015-16250149)
chr7 (91-222)||(46681119-46681252)
chr7 (136-223)||(16574423-16574510)
chr7 (136-223)||(16591152-16591239)
chr7 (64-223)||(15727159-15727319)
chr7 (1-103)||(16107760-16107861)
chr7 (91-223)||(14188094-14188218)
chr7 (4-115)||(15726381-15726493)
chr7 (4-131)||(13256744-13256873)
chr7 (5-102)||(10638487-10638584)
chr7 (11-102)||(8249151-8249242)
chr7 (5-92)||(10628802-10628889)
chr7 (4-85)||(23556398-23556478)
chr7 (45-102)||(10634424-10634482)
chr7 (117-223)||(13732542-13732647)
chr7 (29-131)||(34958638-34958741)
chr7 (112-223)||(16007436-16007546)
chr7 (112-223)||(48786320-48786430)
chr7 (29-131)||(831506-831609)
chr7 (29-131)||(1196686-1196789)
chr7 (27-102)||(8777287-8777364)
chr7 (4-76)||(23557587-23557657)
chr7 (29-105)||(11662182-11662259)
chr7 (162-209)||(15726540-15726587)
chr7 (91-201)||(35367207-35367315)
chr7 (4-85)||(14105349-14105429)
chr7 (4-85)||(14415366-14415446)
chr7 (155-223)||(7530323-7530391)
chr7 (12-88)||(21518224-21518298)
chr7 (91-156)||(21064285-21064350)
chr7 (100-201)||(16921992-16922090)
chr7 (100-201)||(16929085-16929183)
chr7 (73-105)||(16667503-16667535)
chr7 (73-105)||(17641873-17641905)
[»] scaffold0413 (1 HSPs)
scaffold0413 (34-223)||(11739-11920)
[»] scaffold0181 (1 HSPs)
scaffold0181 (4-223)||(25301-25520)
[»] scaffold0124 (2 HSPs)
scaffold0124 (11-223)||(35219-35431)
scaffold0124 (160-223)||(15760-15822)
[»] scaffold0335 (1 HSPs)
scaffold0335 (1-223)||(1840-2055)
[»] scaffold0151 (1 HSPs)
scaffold0151 (64-223)||(10194-10355)
[»] chr3 (32 HSPs)
chr3 (11-223)||(178261-178473)
chr3 (100-223)||(52337746-52337869)
chr3 (4-177)||(52212258-52212431)
chr3 (100-223)||(13837276-13837399)
chr3 (73-223)||(30205403-30205554)
chr3 (5-102)||(13025472-13025569)
chr3 (5-85)||(55291523-55291602)
chr3 (5-102)||(13029064-13029161)
chr3 (4-76)||(23392748-23392819)
chr3 (5-102)||(10551376-10551474)
chr3 (29-131)||(10952603-10952706)
chr3 (29-114)||(10953549-10953635)
chr3 (112-223)||(2037493-2037603)
chr3 (112-223)||(2041234-2041344)
chr3 (112-223)||(14039184-14039294)
chr3 (112-223)||(14042652-14042762)
chr3 (46-114)||(18898068-18898137)
chr3 (112-223)||(39231731-39231841)
chr3 (112-223)||(54974390-54974500)
chr3 (112-223)||(54977000-54977110)
chr3 (112-223)||(54979610-54979720)
chr3 (5-102)||(17547373-17547470)
chr3 (29-131)||(10833179-10833284)
chr3 (46-104)||(18893775-18893834)
chr3 (112-215)||(2033993-2034095)
chr3 (100-201)||(10988638-10988736)
chr3 (4-57)||(13837191-13837242)
chr3 (135-223)||(15009163-15009253)
chr3 (116-223)||(602644-602753)
chr3 (8-53)||(13054945-13054990)
chr3 (116-214)||(7633372-7633472)
chr3 (148-223)||(54042662-54042738)
[»] scaffold0132 (2 HSPs)
scaffold0132 (64-223)||(3468-3629)
scaffold0132 (64-223)||(11428-11589)
[»] scaffold0034 (1 HSPs)
scaffold0034 (64-223)||(33720-33881)
[»] scaffold0107 (1 HSPs)
scaffold0107 (91-223)||(4016-4149)
[»] scaffold0278 (1 HSPs)
scaffold0278 (91-220)||(23510-23640)
[»] scaffold0500 (1 HSPs)
scaffold0500 (91-223)||(10505-10638)
[»] scaffold0860 (1 HSPs)
scaffold0860 (91-223)||(3892-4025)
[»] scaffold0609 (1 HSPs)
scaffold0609 (91-223)||(763-896)
[»] scaffold0064 (1 HSPs)
scaffold0064 (1-103)||(69037-69138)
[»] scaffold0071 (1 HSPs)
scaffold0071 (34-189)||(52081-52237)
[»] scaffold0216 (1 HSPs)
scaffold0216 (31-223)||(22391-22575)
[»] scaffold0331 (1 HSPs)
scaffold0331 (16-113)||(4771-4869)
[»] scaffold1276 (2 HSPs)
scaffold1276 (142-223)||(1279-1360)
scaffold1276 (27-85)||(1212-1271)
[»] scaffold0334 (1 HSPs)
scaffold0334 (4-106)||(2170-2272)
[»] scaffold0021 (2 HSPs)
scaffold0021 (29-131)||(147698-147801)
scaffold0021 (112-223)||(132974-133084)
[»] scaffold0371 (1 HSPs)
scaffold0371 (155-209)||(8713-8767)
[»] scaffold0395 (1 HSPs)
scaffold0395 (134-215)||(7555-7635)
[»] scaffold0058 (1 HSPs)
scaffold0058 (91-223)||(47627-47758)
[»] scaffold0525 (1 HSPs)
scaffold0525 (134-223)||(7409-7498)
[»] scaffold0141 (1 HSPs)
scaffold0141 (27-102)||(34085-34162)
[»] scaffold0049 (1 HSPs)
scaffold0049 (27-102)||(80650-80727)
[»] scaffold0562 (1 HSPs)
scaffold0562 (155-206)||(2674-2725)
[»] scaffold0298 (1 HSPs)
scaffold0298 (160-223)||(812-874)
[»] scaffold0010 (1 HSPs)
scaffold0010 (91-223)||(106439-106569)
[»] scaffold0485 (1 HSPs)
scaffold0485 (4-85)||(3799-3879)
[»] scaffold1765 (1 HSPs)
scaffold1765 (5-85)||(516-594)
[»] scaffold0447 (2 HSPs)
scaffold0447 (64-115)||(7949-8001)
scaffold0447 (64-115)||(12563-12615)
[»] scaffold0383 (1 HSPs)
scaffold0383 (64-115)||(10558-10610)
[»] scaffold0130 (1 HSPs)
scaffold0130 (5-57)||(11551-11603)
[»] scaffold0016 (1 HSPs)
scaffold0016 (5-57)||(181994-182046)
[»] scaffold0001 (1 HSPs)
scaffold0001 (46-131)||(391424-391510)
[»] scaffold0546 (1 HSPs)
scaffold0546 (27-103)||(9745-9824)
[»] scaffold0109 (1 HSPs)
scaffold0109 (27-103)||(3483-3562)
[»] scaffold0012 (1 HSPs)
scaffold0012 (160-219)||(221978-222036)
[»] scaffold0004 (2 HSPs)
scaffold0004 (45-103)||(385250-385310)
scaffold0004 (73-102)||(60533-60562)
[»] scaffold0011 (1 HSPs)
scaffold0011 (4-53)||(20751-20800)
[»] scaffold0207 (1 HSPs)
scaffold0207 (45-85)||(9748-9787)


Alignment Details
Target: scaffold0117 (Bit Score: 182; Significance: 2e-98; HSPs: 3)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 21897 - 22122
Alignment:
Q  1 tttgattgaagaacaaaactctacagaaaatctgattctcctcacttggctcttctcctagctttctcttggtttt-ctcccaaaaactgtttgtacgtg 99  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  21897 tttgattgaagaacaaaactctacagaaaatcttattctcctcacttggctcttctcctagctttctcttggtttttctcccaaaaactgtttgtacgtg 21996  T
Q  100 aaactgcctctgacttttatttt-ctaattttctcaataaatataacctcccaatatttaattaactcccacttaattcactaaattctcatttaacccc 198  Q
    ||||| | ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||||||||||     
T  21997 aaactacttctgacttttatttttctaattttctcaataaatataacctcccaatatttaattaactcccacgtaattcatttaattctcatttaaccca 22096  T
Q  199 aaaactccaattaaatcctaattctt 224  Q
    ||||||||||||||||||||||||||    
T  22097 aaaactccaattaaatcctaattctt 22122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 115
Target Start/End: Original strand, 34565 - 34665
Alignment:
Q  16 aaactctacagaaaatctgattctcctcacttggctcttctcctagctttctcttgg-ttttctcccaaaaactgtttgtacgtgaaactgcctctgact 114  Q
    |||||||||  ||||||||||||||||||||| |||||| |||||||||||| |||| |||||||| ||||  ||||||||||||||||||  |||||||    
T  34565 aaactctaccaaaaatctgattctcctcacttcgctcttttcctagctttcttttggtttttctccgaaaacttgtttgtacgtgaaactgtttctgact 34664  T
Q  115 t 115  Q
    |    
T  34665 t 34665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 45 - 103
Target Start/End: Complemental strand, 40182 - 40122
Alignment:
Q  45 cttggctcttctcctagctttctcttgg-ttttctcccaaaa-actgtttgtacgtgaaac 103  Q
    ||||||||||||| |||||||||||||| |||||||||||||  |||||||||||||||||    
T  40182 cttggctcttctcttagctttctcttggtttttctcccaaaactctgtttgtacgtgaaac 40122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 172; Significance: 1e-92; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 5 - 223
Target Start/End: Complemental strand, 24273032 - 24272814
Alignment:
Q  5 attgaagaacaaaactctacagaaaatctgattctcctcacttggctcttctcctagctttctcttggtt-ttctcccaaaaactgtttgtacgtgaaac 103  Q
    ||||| ||||||| ||||||| |||||| |||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||    
T  24273032 attgatgaacaaagctctaca-aaaatcagattctcctctcttggctcttctcctagctttctcttggttcttctcccaaaaactgtttttacgtgaaac 24272934  T
Q  104 tgcctctgacttttattttctaattttctcaataaatataacctcccaatatttaattaactcccacttaattcactaaattctcatttaaccccaaaac 203  Q
    |||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  24272933 tgcctctgacttctattttctaattttctcaataaatataacttcccaatatttaattaactcccacttaattcacttaattctcatttaaccccaaaac 24272834  T
Q  204 tccaattaaatcctaattct 223  Q
    ||||||||||||||||||||    
T  24272833 tccaattaaatcctaattct 24272814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 19802403 - 19802616
Alignment:
Q  1 tttgattgaagaacaaaactctacagaaaatctgattctcctcacttggctcttctcctagctttctcttggtttt-ctcccaaaaactgtttgtacgtg 99  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||           |||||||| |||||||||     |||||||||    
T  19802403 tttgattgaagaacaaaactctagagaaaatctgattctcctcacttggctcttctc-----------ttggtttttctcccaaaattcagttgtacgtg 19802491  T
Q  100 aaa-ctgcctctgacttttattttctaattttctcaataaatataacctcccaatatttaattaactcccacttaattcactaaattctcatttaacccc 198  Q
    ||| |||  |||||||| |||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  19802492 aaaactgtttctgacttctattttctaattttctcaattaatataaccttccaatatttaattaattcccacttaattcacttaattctcatttaacccc 19802591  T
Q  199 aaaactccaattaaatcctaattct 223  Q
    ||||||||||||||||| |||||||    
T  19802592 aaaactccaattaaatcttaattct 19802616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 5 - 223
Target Start/End: Original strand, 21245734 - 21245952
Alignment:
Q  5 attgaagaacaaaactctacagaaaatctgattctcctcacttggctcttctcctagctttctcttggtttt-ctcccaaaaactgtttgtacgtgaaac 103  Q
    ||||| ||||||| ||||||| |||||| |||||||| | |||||||||||||||||||||||||||||||| || ||||||||||||| ||||||||||    
T  21245734 attgatgaacaaagctctaca-aaaatcagattctcccctcttggctcttctcctagctttctcttggtttttcttccaaaaactgtttttacgtgaaac 21245832  T
Q  104 tgcctctgacttttattttctaatttt-ctcaataaatataacctcccaatatttaattaactcccacttaattcactaaattctcatttaaccccaaaa 202  Q
    | | ||| ||  | |||||||  |||| |||| ||||||||| || |||||||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  21245833 tacttctaaccct-attttctcctttttctcagtaaatataatcttccaatatttaattaactcccacttaatttacttaattctcatttaaccccaaaa 21245931  T
Q  203 ctccaattaaatcctaattct 223  Q
    |||||||||||||||||||||    
T  21245932 ctccaattaaatcctaattct 21245952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 11 - 223
Target Start/End: Original strand, 26904460 - 26904672
Alignment:
Q  11 gaacaaaactctacagaaaatctgattctcctcacttggctcttctcctagctttctcttggtttt-ctcccaaaaactgtttgtacgtgaaactgcctc 109  Q
    ||||||| ||||||| |||||| |||||||| | |||||||||||||||||||||||||||||||| ||| |||||||||||| ||| ||||||||| ||    
T  26904460 gaacaaagctctaca-aaaatcagattctcccctcttggctcttctcctagctttctcttggtttttctctcaaaaactgtttttacatgaaactgcttc 26904558  T
Q  110 tgacttttattttctaat-tttctcaataaatataacctcccaatatttaattaactcccacttaattcactaaattctcatttaaccccaaaactccaa 208  Q
    | ||  | |||||||  | ||||||| ||||||||| || |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||    
T  26904559 taaccct-attttctcctctttctcagtaaatataatcttccaatatttaattaactcccacttaatttacttaattctcatttaaccccaaaactccaa 26904657  T
Q  209 ttaaatcctaattct 223  Q
    ||||||| |||||||    
T  26904658 ttaaatcataattct 26904672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 100 - 223
Target Start/End: Original strand, 23376055 - 23376178
Alignment:
Q  100 aaactgcctctgacttttattttctaattttctcaataaatataacctcccaatatttaattaactcccacttaattcactaaattctcatttaacccca 199  Q
    ||||||| |||||||| ||||||||| |||||| |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  23376055 aaactgcttctgacttctattttctagttttcttaataaatataacgtcccaatatttaattaactcccacttaattcacttaattctcatttaacccca 23376154  T
Q  200 aaactccaattaaatcctaattct 223  Q
    ||||||||||||||||||||||||    
T  23376155 aaactccaattaaatcctaattct 23376178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 91 - 223
Target Start/End: Original strand, 22110662 - 22110795
Alignment:
Q  91 ttgtacgtgaaa-ctgcctctgacttttattttctaattttctcaataaatataacctcccaatatttaattaactcccacttaattcactaaattctca 189  Q
    |||||||||||| |||| | |||||| |||||| |||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| ||||||||    
T  22110662 ttgtacgtgaaaactgcttttgacttctattttttaattttctcaataaatataacttcccaatatttaattaactcccacctaattcacttaattctca 22110761  T
Q  190 tttaaccccaaaactccaattaaatcctaattct 223  Q
    ||||||||||||||||||||||||||||||||||    
T  22110762 tttaaccccaaaactccaattaaatcctaattct 22110795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 5 - 223
Target Start/End: Original strand, 28350209 - 28350423
Alignment:
Q  5 attgaagaacaaaactctacagaaaatctgattctcctcacttggctcttctcctagctttctcttggtttt-ctcccaaaaactgtttgtacgtgaaac 103  Q
    ||||| ||||||| ||||||||||  || |||||| | |||||||| |||||| |||||||||||||||||| ||||||||  |||||||||||||||||    
T  28350209 attgatgaacaaagctctacagaa--tccgattcttcccacttggcacttctcttagctttctcttggtttttctcccaaactctgtttgtacgtgaaac 28350306  T
Q  104 tgcctctgacttttattttctaattttctcaataaatataacctcccaatatttaattaactcccacttaattcactaaattctcatttaaccccaaaac 203  Q
    ||  || ||||| |||||||||| || || ||||||||||||||| ||||| ||  |||||| || ||||||||  | |||||| |||||||||||||      
T  28350307 tgtttcagacttctattttctaa-ttccttaataaatataacctcacaata-ttccttaact-cctcttaattctattaattctaatttaaccccaaact 28350403  T
Q  204 tccaattaaatcctaattct 223  Q
    || || ||| ||||||||||    
T  28350404 tcaaaataattcctaattct 28350423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 102
Target Start/End: Complemental strand, 6477235 - 6477138
Alignment:
Q  5 attgaagaacaaaactctacagaaaatctgattctcctcacttggctcttctcctagctttctcttgg-ttttctcccaaaaactgtttgtacgtgaaa 102  Q
    ||||| ||||||| ||||||| |||||| ||||||||   |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  6477235 attgatgaacaaagctctaca-aaaatcagattctcccatcttggctcttctcctagctttctcttggtttttctcccaaaaactgtttttacgtgaaa 6477138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 155 - 223
Target Start/End: Original strand, 23086582 - 23086649
Alignment:
Q  155 tttaattaactcccacttaattcactaaattctcatttaaccccaaaactccaattaaatcctaattct 223  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||    
T  23086582 tttatttaactcccacttaattcacttaattctcatttaaccccaaaactccaa-taaattctaattct 23086649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 103
Target Start/End: Original strand, 23003143 - 23003242
Alignment:
Q  5 attgaagaacaaaactctacagaaaatctgattctcctcacttggctcttctcctagctttctcttggttttctcccaaaa--actgtttgtacgtgaaa 102  Q
    |||||||||||||  ||||||||||||||| ||||| |||||||||||| ||| | | |||||||| | ||||||||||||   ||||||||||||||||    
T  23003143 attgaagaacaaaggtctacagaaaatctggttctcttcacttggctctcctcttggttttctctt-gctttctcccaaaatttctgtttgtacgtgaaa 23003241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 29 - 105
Target Start/End: Complemental strand, 41300905 - 41300828
Alignment:
Q  29 aatctgattctcctcacttggctcttctcctagctttctcttggttttctcccaaaa--actgtttgtacgtgaaactg 105  Q
    |||| |||||||| |  ||||||||||||||||||||||||| ||||||||||||||   |||||||||||||||||||    
T  41300905 aatcagattctccccctttggctcttctcctagctttctctt-gttttctcccaaaacctctgtttgtacgtgaaactg 41300828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 112 - 223
Target Start/End: Complemental strand, 41683875 - 41683765
Alignment:
Q  112 acttttattttctaattttctcaataaatataacctcccaatatttaattaactcccacttaattcactaaattctcatttaaccccaaaactccaatta 211  Q
    |||| |||||||||||| | | ||||||||||| ||| ||||||| | || |||||| || | || ||| ||||||||| ||||||| ||||||||||||    
T  41683875 acttctattttctaattcttt-aataaatataatctctcaatattcactttactccccctaagtttacttaattctcatataacccccaaactccaatta 41683777  T
Q  212 aatcctaattct 223  Q
    ||||||| ||||    
T  41683776 aatcctatttct 41683765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 112 - 223
Target Start/End: Original strand, 44621937 - 44622047
Alignment:
Q  112 acttttattttctaattttctcaataaatataacctcccaatatttaattaactcccacttaattcactaaattctcatttaaccccaaaactccaatta 211  Q
    |||| |||||||||||| | | ||||||||||| ||||||||||| | || |||||| || | || ||| ||||||| | ||||||| ||||||||||||    
T  44621937 acttctattttctaattcttt-aataaatataatctcccaatattcactttactccccctaagtttacttaattctcgtataacccccaaactccaatta 44622035  T
Q  212 aatcctaattct 223  Q
    ||||||| ||||    
T  44622036 aatcctatttct 44622047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 131
Target Start/End: Complemental strand, 21072664 - 21072561
Alignment:
Q  29 aatctgattctcctcacttggctcttctcctagctttctcttggttttctcccaaaa--actgtttgtacgtgaaactgcctctgacttttattttctaa 126  Q
    |||| |||||||| |  |||||||||||| |||||||||||| ||||||||||||||   ||||||||| |||||||||  ||||||| | | ||||||     
T  21072664 aatcagattctccccctttggctcttctcttagctttctctt-gttttctcccaaaacctctgtttgtatgtgaaactggttctgactctcagtttctat 21072566  T
Q  127 ttttc 131  Q
    |||||    
T  21072565 ttttc 21072561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 84
Target Start/End: Original strand, 22704067 - 22704110
Alignment:
Q  42 tcacttggctcttctcctagctttctcttgg-ttttctcccaaa 84  Q
    |||||||||||||||||||||||| |||||| ||||||||||||    
T  22704067 tcacttggctcttctcctagctttttcttggtttttctcccaaa 22704110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 223
Target Start/End: Complemental strand, 12627024 - 12626915
Alignment:
Q  116 ttattttctaattttctcaataaatataacctcccaa-tatttaattaactcccacttaattcactaaattctcatttaacccc-aaaactccaattaaa 213  Q
    ||||||||||||| | |  |||||||||| ||||| | |||| | |||| ||||| | |||| ||| ||||||||| ||||||| |||||||||||||||    
T  12627024 ttattttctaattctttttataaatataatctccccagtattcacttaattcccattaaatttacttaattctcatataacccccaaaactccaattaaa 12626925  T
Q  214 tcctaattct 223  Q
    | ||| ||||    
T  12626924 ttctatttct 12626915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 208
Target Start/End: Original strand, 24161462 - 24161515
Alignment:
Q  155 tttaattaactcccacttaattcactaaattctcatttaaccccaaaactccaa 208  Q
    |||| ||||||||||||||||||||| ||||   | ||||||||||||||||||    
T  24161462 tttatttaactcccacttaattcacttaattaataattaaccccaaaactccaa 24161515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0607 (Bit Score: 157; Significance: 1e-83; HSPs: 1)
Name: scaffold0607
Description:

Target: scaffold0607; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 3842 - 4065
Alignment:
Q  1 tttgattgaagaacaaaactctacagaaaatctgattctcctcacttggctcttctcctagctttctcttgg-ttttctcccaaaaactgtttgtacgtg 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  3842 tttgattgaagaacaaaactctacagaaaatctgattctcctcacttggctcttctcctagctttctcttggtttttctcccaaaaactgtttgtacgtg 3941  T
Q  100 aaactgcctctgacttttattttc-taattttctcaataaatataacctcccaatatttaattaactcccacttaattcactaaattctcatttaacccc 198  Q
    ||||||| ||| ||   ||||||| |  |||||| ||||||||||| || ||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  3942 aaactgcttctaac-cctattttcttctttttctgaataaatataatcttccaatatttaattaactcccacttaattcacttcattctcatttaacccc 4040  T
Q  199 aaaactccaattaaatcctaattct 223  Q
    |||||||||||||||||||||||||    
T  4041 aaaactccaattaaatcctaattct 4065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 152; Significance: 1e-80; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 5 - 223
Target Start/End: Original strand, 18271374 - 18271591
Alignment:
Q  5 attgaagaacaaaactctacagaaaatctgattctcctcacttggctcttctcctagctttctcttgg-ttttctcccaaaaactgtttgtacgtgaaac 103  Q
    ||||| ||||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  18271374 attgatgaacaaagctctaca-aaaatctgattctcctcccttggctcttctcctagctttctcttggtttttctccc-aaaactgtttgtacgtgaaac 18271471  T
Q  104 tgcctctgacttttattttctaattttctcaataaatataacctcccaatatttaattaactcccacttaattcactaaattctcatttaaccccaaaac 203  Q
    ||| ||| |||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||| ||||||||| ||||||||||||||| ||||||    
T  18271472 tgcttctcacttctattttctaattttctcaataaatataaattcccaatatttaattaactcccacctaattcacttaattctcatttaaccacaaaac 18271571  T
Q  204 tccaattaaatcctaattct 223  Q
    ||||||||||||||||||||    
T  18271572 tccaattaaatcctaattct 18271591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 5 - 223
Target Start/End: Original strand, 18276028 - 18276245
Alignment:
Q  5 attgaagaacaaaactctacagaaaatctgattctcctcacttggctcttctcctagctttctcttgg-ttttctcccaaaaactgtttgtacgtgaaac 103  Q
    ||||| ||||||| ||||||| || |||||||||||||| |||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  18276028 attgatgaacaaagctctaca-aatatctgattctcctcccttggctcttctcctagctttctcttggtttttctccc-aaaactgtttgtacgtgaaac 18276125  T
Q  104 tgcctctgacttttattttctaattttctcaataaatataacctcccaatatttaattaactcccacttaattcactaaattctcatttaaccccaaaac 203  Q
    ||| ||| |||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||| ||||||||| ||||||||||||||| ||||||    
T  18276126 tgcttctcacttctattttctaattttctcaataaatataaattcccaatatttaattaactcccacctaattcacttaattctcatttaacctcaaaac 18276225  T
Q  204 tccaattaaatcctaattct 223  Q
    ||||||||||||||||||||    
T  18276226 tccaattaaatcctaattct 18276245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 5 - 223
Target Start/End: Original strand, 21660423 - 21660640
Alignment:
Q  5 attgaagaacaaaactctacagaaaatctgattctcctcacttggctcttctcctagctttctcttggtttt-ctcccaaaaactgtttgtacgtgaaac 103  Q
    ||||| ||||||| |||||||  ||||| |||||| | | |||||||||||||||||||||||||||||||| ||||||||||||||||  |||||||||    
T  21660423 attgatgaacaaagctctaca--aaatcagattcttccctcttggctcttctcctagctttctcttggtttttctcccaaaaactgtttccacgtgaaac 21660520  T
Q  104 tgcctctgacttttattttctaatttt-ctcaataaatataacctcccaatatttaattaactcccacttaattcactaaattctcatttaaccccaaaa 202  Q
    ||| ||| || || |||||||  |||| |||| ||||||||| || |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  21660521 tgcttctaacctt-attttctcctttttctcagtaaatataatcttccaatatttaattaactcccacttaatttactaaattctcatttaaccccaaaa 21660619  T
Q  203 ctccaattaaatcctaattct 223  Q
    |||||||||||| ||||||||    
T  21660620 ctccaattaaattctaattct 21660640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 64 - 223
Target Start/End: Complemental strand, 21180232 - 21180071
Alignment:
Q  64 ttctcttggtttt-ctcccaaaaactgt-ttgtacgtgaaa-ctgcctctgacttttattttctaattttctcaataaatataacctcccaatatttaat 160  Q
    ||||||||||||| ||||||||| || | |||||||||||| |||| |||||||| ||||| |||||||||||||||||||||||||| | |||||||||    
T  21180232 ttctcttggtttttctcccaaaa-ctctattgtacgtgaaaactgcttctgacttctatttactaattttctcaataaatataacctcacgatatttaat 21180134  T
Q  161 taactcccacttaattcactaaattctcatttaaccccaaaactccaattaaatcctaattct 223  Q
    |||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  21180133 taactcccacttaattcacttaattctcatttaaccccaaaactcaaattaaatcctaattct 21180071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 91 - 223
Target Start/End: Complemental strand, 28203682 - 28203549
Alignment:
Q  91 ttgtacgtgaaa-ctgcctctgacttttattttctaattttctcaataaatataacctcccaatatttaattaactcccacttaattcactaaattctca 189  Q
    |||||||||||| |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| | |    
T  28203682 ttgtacgtgaaaactgcttctgacttctattttctaattttctcaataaatataacctcccaatatttaattaactcccactcaattcacttaattatta 28203583  T
Q  190 tttaaccccaaaactccaattaaatcctaattct 223  Q
    ||| ||||||||||||||||||||||||||||||    
T  28203582 tttgaccccaaaactccaattaaatcctaattct 28203549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 91 - 223
Target Start/End: Original strand, 20902261 - 20902395
Alignment:
Q  91 ttgtacgtga-aactgcctctgacttttattttctaatttt-ctcaataaatataacctcccaatatttaattaactcccacttaattcactaaattctc 188  Q
    |||||||||| |||||| |||||||| ||||||| |||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||| |||||||    
T  20902261 ttgtacgtgacaactgcttctgacttctattttccaatttttctcaataaatataacttcccaatatttaattaactcccgcttaattcacttaattctc 20902360  T
Q  189 atttaaccccaaaactccaattaaatcctaattct 223  Q
    ||||||||||||||||| |||||||||||||||||    
T  20902361 atttaaccccaaaactcaaattaaatcctaattct 20902395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 13227939 - 13228040
Alignment:
Q  1 tttgattgaagaacaaaactctacagaaaatctgattctcctcacttggctcttctcctagctttctcttggttttctcccaaaaactgtttgtacgtga 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||||||||    
T  13227939 tttgattgaagaacaaaactctacagaaaatctgattctcctcacttggctcttctcctaactttctcttggttttctccc-aaaactgattgtacgtga 13228037  T
Q  101 aac 103  Q
    |||    
T  13228038 aac 13228040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 102
Target Start/End: Complemental strand, 13527713 - 13527616
Alignment:
Q  5 attgaagaacaaaactctacagaaaatctgattctcctcacttggctcttctcctagctttctcttgg-ttttctcccaaaaactgtttgtacgtgaaa 102  Q
    ||||| ||||||| ||||||| |||||| |||||||| | ||||||||||||||||||||| |||||| |||||||||||||||||||| |||||||||    
T  13527713 attgatgaacaaagctctaca-aaaatcagattctcccctcttggctcttctcctagctttttcttggtttttctcccaaaaactgtttttacgtgaaa 13527616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 112 - 223
Target Start/End: Original strand, 20632323 - 20632433
Alignment:
Q  112 acttttattttctaattttctcaataaatataacctcccaatatttaattaactcccacttaattcactaaattctcatttaaccccaaaactccaatta 211  Q
    |||| |||||||||||| | | ||||||||||| ||||||||||| | || |||||| || | || ||| ||||||| | ||||||| ||||||||||||    
T  20632323 acttctattttctaattcttt-aataaatataatctcccaatattcactttactccccctaagtttacttaattctcgtataacccccaaactccaatta 20632421  T
Q  212 aatcctaattct 223  Q
    ||||||| ||||    
T  20632422 aatcctatttct 20632433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 112 - 223
Target Start/End: Original strand, 22075372 - 22075482
Alignment:
Q  112 acttttattttctaattttctcaataaatataacctcccaatatttaattaactcccacttaattcactaaattctcatttaaccccaaaactccaatta 211  Q
    |||| |||||||||||| | | ||||||||||| ||||||||||| | || |||||| || | || ||| ||||||| | ||||||| ||||||||||||    
T  22075372 acttctattttctaattcttt-aataaatataatctcccaatattcactttactccccctaagtttacttaattctcgtataacccccaaactccaatta 22075470  T
Q  212 aatcctaattct 223  Q
    ||||||| ||||    
T  22075471 aatcctatttct 22075482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 117 - 223
Target Start/End: Original strand, 37359478 - 37359583
Alignment:
Q  117 tattttctaattttctcaataaatataacctcccaatatttaattaactcccacttaattcactaaattctcatttaaccccaaaactccaattaaatcc 216  Q
    |||||||||||| | | ||||||||||| ||||||||||| | || |||||| || |||| ||| |||| || | ||||||| |||||||||||||||||    
T  37359478 tattttctaattcttt-aataaatataatctcccaatattcactttactccctctaaatttacttaattatcgtataacccccaaactccaattaaatcc 37359576  T
Q  217 taattct 223  Q
    || ||||    
T  37359577 tatttct 37359583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 134 - 223
Target Start/End: Original strand, 36182604 - 36182693
Alignment:
Q  134 aataaatataacctcccaatatttaattaactcccacttaattcactaaattctcatttaaccccaaaactccaattaaatcctaattct 223  Q
    ||||||||||| ||||||||||| | || |||||| || | || ||| ||||||| | ||||||| ||||||||||||||||||| ||||    
T  36182604 aataaatataatctcccaatattcactttactccccctaagtttacttaattctcgtataacccccaaactccaattaaatcctatttct 36182693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 131
Target Start/End: Original strand, 28313425 - 28313527
Alignment:
Q  29 aatctgattctcctcacttggctcttctcctagctttctcttggttttctcccaaaaact-gtttgtacgtgaaactgcctctgacttttattttctaat 127  Q
    |||| |||||||| |  ||||||||||||||| |||||| ||| ||||||||||||| || |||||||||||||||||  ||||||| | | |||||| |    
T  28313425 aatcagattctccccctttggctcttctcctaactttcttttg-ttttctcccaaaaccttgtttgtacgtgaaactggttctgactctcagtttctatt 28313523  T
Q  128 tttc 131  Q
    ||||    
T  28313524 tttc 28313527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 57
Target Start/End: Complemental strand, 634996 - 634952
Alignment:
Q  11 gaacaaaactctacagaaaatctgattctcctcacttggctcttctc 57  Q
    ||||||||||||||||||  ||||||||||| |||||||||||||||    
T  634996 gaacaaaactctacagaa--tctgattctccccacttggctcttctc 634952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 223
Target Start/End: Complemental strand, 45495235 - 45495157
Alignment:
Q  146 ctcccaatatttaattaactcccacttaattcactaaattctcatttaacccc-aaaactccaattaaatcctaattct 223  Q
    ||||||||||| | || ||||||||| |||| | | ||||||| | ||||||| |||||||||||||||||||| ||||    
T  45495235 ctcccaatattcactttactcccactaaatttagttaattctcgtataacccccaaaactccaattaaatcctatttct 45495157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0672 (Bit Score: 141; Significance: 5e-74; HSPs: 1)
Name: scaffold0672
Description:

Target: scaffold0672; HSP #1
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 7472 - 7249
Alignment:
Q  1 tttgattgaagaacaaaactctacagaaaatctgattctcctcacttggctcttctcctagctttctcttgg-ttttctcccaaaaactgtttgtacgtg 99  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||    
T  7472 tttgattgaagaacaaaactctacaggaaatctgattctcctcacttggctcttctcctagttttctcttggtttttctcccaaaaactgtttgttcgtg 7373  T
Q  100 aaactgcctctgacttttattttct-aattttctcaataaatataacctcccaatatttaattaactcccacttaattcactaaattctcatttaacccc 198  Q
    ||||||| ||| ||   ||||||||   ||||||||  |||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  7372 aaactgcttctaac-cctattttctcctttttctcaggaaatataatcttccaatatttaattaactcccacttaattcacttaattctcatttaacccc 7274  T
Q  199 aaaactccaattaaatcctaattct 223  Q
    ||| |||||||||||||||||||||    
T  7273 aaagctccaattaaatcctaattct 7249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 141; Significance: 5e-74; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 67748 - 67971
Alignment:
Q  1 tttgattgaagaacaaaactctacagaaaatctgattctcctcacttggctcttctcctagctttctcttgg-ttttctcccaaaaactgtttgtacgtg 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| ||||||| | ||||||||||    
T  67748 tttgattgaagaacaaaactctacagaaaatctgattctcctcacttggctcttctcctagctatctcttggtttttcttccaaaaattatttgtacgtg 67847  T
Q  100 aaactgcctctgacttttattttct-aattttctcaataaatataacctcccaatatttaattaactcccacttaattcactaaattctcatttaacccc 198  Q
    ||||||| ||| ||   ||||||||   |||||||| ||||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  67848 aaactgcttctaac-cctattttctcctttttctcagtaaatataatcttccaatatttaattaactcccacttaattcacttaattctcatttaacccc 67946  T
Q  199 aaaactccaattaaatcctaattct 223  Q
    ||||||| |||||||||||||||||    
T  67947 aaaactctaattaaatcctaattct 67971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 5 - 223
Target Start/End: Original strand, 52257 - 52475
Alignment:
Q  5 attgaagaacaaaactctacagaaaatctgattctcctcacttggctcttctcctagctttctcttgg-ttttctcccaaaaactgtttgtacgtgaaac 103  Q
    ||||| ||||||| ||| ||| |||||| |||||||| | ||||||||||||||||||||||| |||| |||||||||||||||| ||| ||||||||||    
T  52257 attgatgaacaaagctcaaca-aaaatcagattctcccctcttggctcttctcctagctttctattggtttttctcccaaaaactatttttacgtgaaac 52355  T
Q  104 tgcctctgacttttattttct-aattttctcaataaatataacctcccaatatttaattaactcccacttaattcactaaattctcatttaaccccaaaa 202  Q
    ||| ||| ||   ||||||||   |||||||| ||||||||| || |||||||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  52356 tgcttctaac-cctattttctcctttttctcagtaaatataatcttccaatatttaattaactcccacttaatttacttaattctcatttaaccccaaaa 52454  T
Q  203 ctccaattaaatcctaattct 223  Q
    |||||||||||||||||||||    
T  52455 ctccaattaaatcctaattct 52475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 129; Significance: 7e-67; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 21860536 - 21860322
Alignment:
Q  1 tttgattgaagaacaaaactctacagaaaatctgattctcctcacttggctcttctcctagctttctcttgg-ttttctcccaaaaactgtttgtacgtg 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  21860536 tttgattgaagaacaaaactctacagaaaatctgattctcctcacttggctcttctcctagctttctcttggtttttctcccaaaaactgtttgtacgtg 21860437  T
Q  100 aaactgcctctgacttttattttct-aattttctcaataaatataacctcccaatatttaattaactcccacttaattcactaaattctcatttaacccc 198  Q
    ||||||| ||| ||   ||||||||   |||||||| ||||||||| || ||||||||||||||||||||||||         |||||||||||||||||    
T  21860436 aaactgcttctaac-cctattttctcctttttctcagtaaatataatcttccaatatttaattaactcccactt---------aattctcatttaacccc 21860347  T
Q  199 aaaactccaattaaatcctaattct 223  Q
    ||| |||||||||||||||||||||    
T  21860346 aaagctccaattaaatcctaattct 21860322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 5 - 223
Target Start/End: Complemental strand, 15635093 - 15634875
Alignment:
Q  5 attgaagaacaaaactctacagaaaatctgattctcctcacttggctcttctcctagctttctcttggtttt-ctcccaaaaactgtttgtacgtgaaac 103  Q
    ||||| ||||||| ||||||| ||||  | ||||||| | |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  15635093 attgatgaacaaagctctacaaaaaacat-attctcccctcttggctcttctcctagctttctcttggtttttctcccaaaaactgtttgtacgtgaaac 15634995  T
Q  104 tgcctctgacttttattttct-aattttctcaataaatataacctcccaatatttaattaactcccacttaattcactaaattctcatttaaccccaaaa 202  Q
    ||| ||| ||   ||||||||   |||||||| ||||||||| || ||||||||||||||||||||| |||||| ||| |||||||||||||||||||||    
T  15634994 tgcttctaac-catattttctcctttttctcagtaaatataatcttccaatatttaattaactcccaattaatttacttaattctcatttaaccccaaaa 15634896  T
Q  203 ctccaattaaatcctaattct 223  Q
    ||||||||||| |||||||||    
T  15634895 ctccaattaaaacctaattct 15634875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 64 - 223
Target Start/End: Complemental strand, 25657466 - 25657305
Alignment:
Q  64 ttctcttggtttt-ctcccaaaaa-ctgtttgtacgtgaaa-ctgcctctgacttttattttctaattttctcaataaatataacctcccaatatttaat 160  Q
    ||||||||||||| |||||||||  ||||| |||||||||| |||  |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  25657466 ttctcttggtttttctcccaaaactctgtt-gtacgtgaaaactgattctgacttctattttctaattttctcaataaatataacctcccaatatttaat 25657368  T
Q  161 taactcccacttaattcactaaattctcatttaaccccaaaactccaattaaatcctaattct 223  Q
    ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  25657367 taactcccacttaattcgcttaattctcatttaaccccaaaactccaattaaatcctaattct 25657305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 64 - 223
Target Start/End: Original strand, 32951000 - 32951161
Alignment:
Q  64 ttctcttggtttt-ctcccaaaaa-ctgtttgtacgtgaaa-ctgcctctgacttttattttctaattttctcaataaatataacctcccaatatttaat 160  Q
    ||||||||||||| |||||||||  ||||| |||||||||| |||| |||||||| ||||||||||||||||||||||||||||| ||||||||||||||    
T  32951000 ttctcttggtttttctcccaaaactctgtt-gtacgtgaaaactgcttctgacttctattttctaattttctcaataaatataacttcccaatatttaat 32951098  T
Q  161 taactcccacttaattcactaaattctcatttaaccccaaaactccaattaaatcctaattct 223  Q
    |||||||||| ||||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  32951099 taactcccacgtaattcacttaattctcatttaactccaaaactccaattaaatcctaattct 32951161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 91 - 223
Target Start/End: Complemental strand, 15003026 - 15002893
Alignment:
Q  91 ttgtacgtgaaa-ctgcctctgacttttattttctaattttctcaataaatataacctcccaatatttaattaactcccacttaattcactaaattctca 189  Q
    |||||||||||| |||| | |||| | ||||||||||||||||||||||||||||| | |||||||||||||||||||||| ||||||||| ||||||||    
T  15003026 ttgtacgtgaaaactgcttttgacctctattttctaattttctcaataaatataactttccaatatttaattaactcccacctaattcacttaattctca 15002927  T
Q  190 tttaaccccaaaactccaattaaatcctaattct 223  Q
    ||||||||||||||||||||||||||||||||||    
T  15002926 tttaaccccaaaactccaattaaatcctaattct 15002893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 64 - 216
Target Start/End: Original strand, 19883047 - 19883201
Alignment:
Q  64 ttctcttggtttt-ctcccaaaaa-ctgtttgtacgtgaaa-ctgcctctgacttttattttctaattttctcaataaatataacctcccaatatttaat 160  Q
    ||||||||||||| |||||||||  ||||| |||||||||| |||| |||||| | |||||||||||||||||||| |||||||||| |||||||||| |    
T  19883047 ttctcttggtttttctcccaaaactctgtt-gtacgtgaaaactgcttctgacatctattttctaattttctcaattaatataaccttccaatatttact 19883145  T
Q  161 taactcccacttaattcactaaattctcatttaaccccaaaactccaattaaatcc 216  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  19883146 taactcccacttaattcacttaattctcatttaaccccaaaactccaattaaatcc 19883201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 64 - 223
Target Start/End: Complemental strand, 22433566 - 22433404
Alignment:
Q  64 ttctcttggtttt-ctcccaaaaa-ctgtttgtacgtgaaa-ctgcctctgacttttattttctaattttctcaataaatataacctcccaatatttaat 160  Q
    ||||||||||||| |||||||||  |||||||| ||||||| |||| ||| |||  |||||||||||||||||| |||| |||||||||||| || ||||    
T  22433566 ttctcttggtttttctcccaaaactctgtttgttcgtgaaaactgcttctaactcctattttctaattttctcagtaaacataacctcccaaaatctaat 22433467  T
Q  161 taactcccacttaattcactaaattctcatttaaccccaaaactccaattaaatcctaattct 223  Q
    ||||| |||||||||||||| || | | |||||||||||||||||||| ||||| | ||||||    
T  22433466 taacttccacttaattcacttaactattatttaaccccaaaactccaaataaattccaattct 22433404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 27 - 115
Target Start/End: Complemental strand, 22815574 - 22815485
Alignment:
Q  27 aaaatctgattctcctcacttggctcttctcctagctttctcttgg-ttttctcccaaaaactgtttgtacgtgaaactgcctctgactt 115  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||  ||||||||||||||||||| ||||||||    
T  22815574 aaaatctaattctcctcacttggctcttctcctagctttctcttggtttttctcccaaaatttgtttgtacgtgaaactgcttctgactt 22815485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 64 - 208
Target Start/End: Original strand, 20387584 - 20387732
Alignment:
Q  64 ttctcttggtttt-ctcccaaaaa-ctgtttgtacgtgaaa-ctgcctctgacttttattttctaattttctcaataaatataacctcccaatatttaat 160  Q
    ||||||||||||| |||||||||  |||||||||||||||| |||| ||| |||  ||  |||||||||||||| |||| ||||| ||||||||| ||||    
T  20387584 ttctcttggtttttctcccaaaactctgtttgtacgtgaaaactgcttctaactcctaggttctaattttctcagtaaacataacttcccaatatctaat 20387683  T
Q  161 taactcccacttaa-ttcactaaattctcatttaaccccaaaactccaa 208  Q
    |||||||||||||| |||||| |||||| ||||||||||||||||||||    
T  20387684 taactcccacttaatttcacttaattcttatttaaccccaaaactccaa 20387732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 105
Target Start/End: Original strand, 14420299 - 14420389
Alignment:
Q  16 aaactctacagaaaatctgattctcctcacttggctcttctcctagctttctcttgg-ttttctcccaaaaactgtttgtacgtgaaactg 105  Q
    |||||||||  |||||||||||||| ||||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||||||||||    
T  14420299 aaactctaccaaaaatctgattctcttcacttggctcttctcctaactttctcttggtttttttcccaaaaactgtttgtacgtgaaactg 14420389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 103
Target Start/End: Original strand, 24980165 - 24980264
Alignment:
Q  5 attgaagaacaaaactctacagaaaatctgattctcctcacttggctcttctcctagctttctcttggttttctcccaaaa--actgtttgtacgtgaaa 102  Q
    ||||||||||||| |||||||||||||||| ||||| |||||||||||| ||| | | |||||||| | ||||||||||||   ||||||||||||||||    
T  24980165 attgaagaacaaagctctacagaaaatctggttctcttcacttggctctcctcttggttttctctt-gctttctcccaaaacttctgtttgtacgtgaaa 24980263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 100 - 223
Target Start/End: Complemental strand, 6607385 - 6607264
Alignment:
Q  100 aaactgcctctgacttttattttctaattttctcaataaatataacctcccaatatttaattaactcccacttaattcactaaattctcatttaacccca 199  Q
    |||||||||||  ||| |||||||||  ||||| ||||||||||||||| ||||||| | || |||||| || | || ||| ||||||| |  ||||||     
T  6607385 aaactgcctctcccttctattttcta--tttcttaataaatataacctctcaatattcactttactccccctaagtttacttaattctcgtaaaaccccc 6607288  T
Q  200 aaactccaattaaatcctaattct 223  Q
    ||||||||||||||||||| ||||    
T  6607287 aaactccaattaaatcctatttct 6607264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 112 - 223
Target Start/End: Complemental strand, 22144499 - 22144389
Alignment:
Q  112 acttttattttctaattttctcaataaatataacctcccaatatttaattaactcccacttaattcactaaattctcatttaaccccaaaactccaatta 211  Q
    |||| |||||||||||| | | ||||||||||| ||||||||||| | || |||||| || | || ||| ||||||| | ||||||| ||||||||||||    
T  22144499 acttctattttctaattcttt-aataaatataatctcccaatattcactttactccccctaagtttacttaattctcgtataacccccaaactccaatta 22144401  T
Q  212 aatcctaattct 223  Q
    ||||||| ||||    
T  22144400 aatcctatttct 22144389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 102
Target Start/End: Complemental strand, 45134086 - 45134009
Alignment:
Q  27 aaaatctga-ttctcctcacttggctcttctcctagctttctcttgg-ttttctcccaaaaactgtttgtacgtgaaa 102  Q
    ||||||||| |||||| ||||||||||||||| | |||||||||||| ||||||||||||||||| ||  ||||||||    
T  45134086 aaaatctgaattctccccacttggctcttctcttggctttctcttggtttttctcccaaaaactgcttccacgtgaaa 45134009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 223
Target Start/End: Complemental strand, 22815441 - 22815378
Alignment:
Q  160 ttaactcccacttaattcactaaattctcatttaaccccaaaactccaattaaatcctaattct 223  Q
    ||||||||||||||||||||| |||| | | |||||||||||||||||| ||||| ||| ||||    
T  22815441 ttaactcccacttaattcacttaattattaattaaccccaaaactccaaataaattctacttct 22815378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 146 - 223
Target Start/End: Complemental strand, 24706890 - 24706812
Alignment:
Q  146 ctcccaatatttaattaactcccacttaattcactaaattctcatttaacccc-aaaactccaattaaatcctaattct 223  Q
    ||||||||||| | || ||||||||| |||| ||| ||||||| | ||||||| |||||||||||||||||||| ||||    
T  24706890 ctcccaatattcactttactcccactaaatttacttaattctcgtataacccccaaaactccaattaaatcctatttct 24706812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 116 - 223
Target Start/End: Complemental strand, 10834019 - 10833910
Alignment:
Q  116 ttattttctaattttctcaataaatataacctccc-aatatttaattaactcccacttaattcactaaattctcatttaacccc-aaaactccaattaaa 213  Q
    ||||||||||||| | |  |||||||||| ||||| |||||| | |||| ||||| | |||| ||| ||||||||| ||||||| |||||||||||||||    
T  10834019 ttattttctaattctttttataaatataatctccccaatattcacttaattcccattaaatttacttaattctcatataacccccaaaactccaattaaa 10833920  T
Q  214 tcctaattct 223  Q
    | ||| ||||    
T  10833919 ttctatttct 10833910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 57
Target Start/End: Original strand, 19883007 - 19883051
Alignment:
Q  11 gaacaaaactctacagaaaatctgattctcctcacttggctcttctc 57  Q
    ||||||||||||||||||  ||||||||||| |||||||||||||||    
T  19883007 gaacaaaactctacagaa--tctgattctccccacttggctcttctc 19883051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 193
Target Start/End: Original strand, 14420436 - 14420469
Alignment:
Q  160 ttaactcccacttaattcactaaattctcattta 193  Q
    ||||||||||||||||||||| ||||||||||||    
T  14420436 ttaactcccacttaattcacttaattctcattta 14420469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 85
Target Start/End: Original strand, 17796281 - 17796361
Alignment:
Q  4 gattgaagaacaaaactctacagaaaatctgattctcctcacttggctcttctcctagctttctcttggttttctcccaaaa 85  Q
    |||||||| ||| |||||||||||||||| | ||||  |||||||||||| ||| | | |||||||| | ||||||||||||    
T  17796281 gattgaaggacagaactctacagaaaatccggttcttttcacttggctctcctcttggttttctctt-gctttctcccaaaa 17796361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 135 - 215
Target Start/End: Complemental strand, 22058483 - 22058402
Alignment:
Q  135 ataaatataacctcccaatatttaattaactcccacttaattcactaaattctcatttaa-ccccaaaactccaattaaatc 215  Q
    |||||||||| ||||||||||| | || |||||| || |||| ||| ||||||| | ||| ||||| |||||||||||||||    
T  22058483 ataaatataatctcccaatattaactttactccccctaaatttacttaattctcgtataacccccagaactccaattaaatc 22058402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0962 (Bit Score: 127; Significance: 1e-65; HSPs: 1)
Name: scaffold0962
Description:

Target: scaffold0962; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 4 - 223
Target Start/End: Complemental strand, 615 - 396
Alignment:
Q  4 gattgaagaacaaaactctacagaaaatctgattctcctcacttggctcttctcctagctttctcttggtttt-ctcccaaaaa-ctgtttgtacgtgaa 101  Q
    |||||| ||||||||||||||||||  ||||||||| | ||||||||||||||| |||||||||||||||||| |||||||||| ||||||||| |||||    
T  615 gattgatgaacaaaactctacagaa--tctgattcttcccacttggctcttctcttagctttctcttggtttttctcccaaaaatctgtttgtatgtgaa 518  T
Q  102 actgcctctgacttttattttctaattttctcaataaatataacctcccaatatttaattaactcccacttaattcactaaattctcatttaaccccaaa 201  Q
    ||||| ||||||| |||  |||||||||||||| |||| ||||||||||||||| |||||||||||||||||||||| | |||||| |||||||||||||    
T  517 actgcttctgactcttaggttctaattttctcagtaaacataacctcccaatatctaattaactcccacttaattcatttaattcttatttaaccccaaa 418  T
Q  202 actccaattaaatcctaattct 223  Q
    ||||||| ||||| ||||||||    
T  417 actccaaataaattctaattct 396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 127; Significance: 1e-65; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 4 - 223
Target Start/End: Complemental strand, 21663142 - 21662923
Alignment:
Q  4 gattgaagaacaaaactctacagaaaatctgattctcctcacttggctcttctcctagctttctcttggtttt-ctcccaaaaa-ctgtttgtacgtgaa 101  Q
    |||||| ||||||||||||||||||  ||||||||| | ||||||||||||||| |||||||||||||||||| |||||||||| ||||||||| |||||    
T  21663142 gattgatgaacaaaactctacagaa--tctgattcttcccacttggctcttctcttagctttctcttggtttttctcccaaaaatctgtttgtatgtgaa 21663045  T
Q  102 actgcctctgacttttattttctaattttctcaataaatataacctcccaatatttaattaactcccacttaattcactaaattctcatttaaccccaaa 201  Q
    ||||| ||||||| |||  |||||||||||||| |||| ||||||||||||||| |||||||||||||||||||||| | |||||| |||||||||||||    
T  21663044 actgcttctgactcttaggttctaattttctcagtaaacataacctcccaatatctaattaactcccacttaattcatttaattcttatttaaccccaaa 21662945  T
Q  202 actccaattaaatcctaattct 223  Q
    ||||||| ||||| ||||||||    
T  21662944 actccaaataaattctaattct 21662923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 17813532 - 17813745
Alignment:
Q  1 tttgattgaagaacaaaactctacagaaaatctgattctcctcacttggctcttctcctagctttctcttgg-ttttctcccaaaaactgtttgtacgtg 99  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  17813532 tttgattgaagaacaaaactctacagaaaatctgattctcttcacttggctcttctcctagctttctcttggtttttctcccaaaaactgtttgtacgtg 17813631  T
Q  100 aaactgcctctgacttttattttct-aattttctcaataaatataacctcccaatatttaattaactcccacttaattcactaaattctcatttaacccc 198  Q
    ||||||| ||| ||   ||||||||   |||||||| ||||||||| || ||||||||||||||||||||||||         |||||||||||||||||    
T  17813632 aaactgcttctaac-cctattttctcctttttctcagtaaatataatcttccaatatttaattaactcccactt---------aattctcatttaacccc 17813721  T
Q  199 aaaactccaattaaatcctaattc 222  Q
    ||||||||||||||||| ||||||    
T  17813722 aaaactccaattaaatcataattc 17813745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 4 - 223
Target Start/End: Complemental strand, 21980066 - 21979847
Alignment:
Q  4 gattgaagaacaaaactctacagaaaatctgattctcctcacttggctcttctcctagctttctcttggtttt-ctcccaaaaa-ctgtttgtacgtgaa 101  Q
    |||||| ||||||| ||||||||||  | ||||||||| |||||| || ||||| |||||||||||||||||| |||||||||  |||||||||||||||    
T  21980066 gattgatgaacaaagctctacagaa--tttgattctccccacttgactattctcttagctttctcttggtttttctcccaaaactctgtttgtacgtgaa 21979969  T
Q  102 actgcctctgacttttattttctaattttctcaataaatataacctcccaatatttaattaactcccacttaattcactaaattctcatttaaccccaaa 201  Q
    ||||| ||| |||  ||  |||||||||||||| |||| ||||||| ||||||| ||||||||||||||||||| |||| |||||| | |||||||||||    
T  21979968 actgcttctaactcctaggttctaattttctcagtaaacataaccttccaatatctaattaactcccacttaatccacttaattcttaattaaccccaaa 21979869  T
Q  202 actccaattaaatcctaattct 223  Q
    |||| || ||||| ||||||||    
T  21979868 actctaaataaattctaattct 21979847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 51 - 223
Target Start/End: Complemental strand, 30137944 - 30137771
Alignment:
Q  51 tcttctcctagctttctcttggtttt-ctcccaaaaactgtttgtacgtgaaactgcctctgacttttattttct-aattttctcaataaatataacctc 148  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| ||| ||   ||||||||   |||||||| ||||||||| ||     
T  30137944 tcttctcctagctttctcttggtttttctcccaaaaattgtttgtacgtgaaactgcttctaac-catattttctcctttttctcagtaaatataatctt 30137846  T
Q  149 ccaatatttaattaactcccacttaattcactaaattctcatttaaccccaaaactccaattaaatcctaattct 223  Q
    |||||||||||||||| ||||||| ||||||| |||||| ||||||||| |||||||||||||||||||| ||||    
T  30137845 ccaatatttaattaacgcccactttattcacttaattcttatttaacccaaaaactccaattaaatcctatttct 30137771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 127 - 223
Target Start/End: Original strand, 22470989 - 22471085
Alignment:
Q  127 ttttctcaataaatataacctcccaatatttaattaactcccacttaattcactaaattctcatttaaccccaaaactccaattaaatcctaattct 223  Q
    |||||||| ||||||||| || |||||||||||||||||||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||    
T  22470989 ttttctcagtaaatataatcttccaatatttaattaactcccacttaatttacttaattctcatttaacccaaaaactccaattaaatcctaattct 22471085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 64 - 222
Target Start/End: Complemental strand, 21553342 - 21553181
Alignment:
Q  64 ttctcttggttttctcccaaaaact--gtttgtacgtgaaa-ctgcctctgacttttattttctaattttctcaataaatataacctcccaatatttaat 160  Q
    |||||||||||||   |||||||||  |||||||||||||| |||| ||| |||  ||  |||||||||||||| |||| ||||||||||||||| ||||    
T  21553342 ttctcttggtttttctccaaaaactctgtttgtacgtgaaaactgcttctaactcctaggttctaattttctcagtaaacataacctcccaatatctaat 21553243  T
Q  161 taactcccacttaattcactaaattctcatttaaccccaaaactccaattaaatcctaattc 222  Q
    ||||||||| |||||||||| |||||| | |||||||||||||||||| ||||| |||||||    
T  21553242 taactcccatttaattcacttaattcttaattaaccccaaaactccaaataaattctaattc 21553181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 115
Target Start/End: Complemental strand, 24276486 - 24276384
Alignment:
Q  16 aaactctacagaaaatctgattctcctcacttggctcttctcctagctttctcttgg-ttttctcccaaaa-actgtttgtacgtg-aaactgcctctga 112  Q
    |||||||||  ||||| |||||||| ||||||||||||||||||||||||||||||| |||||||||||||  ||||||||||||| ||||||| |||||    
T  24276486 aaactctaccaaaaatatgattctcttcacttggctcttctcctagctttctcttggtttttctcccaaaactctgtttgtacgtgaaaactgcttctga 24276387  T
Q  113 ctt 115  Q
    |||    
T  24276386 ctt 24276384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 115
Target Start/End: Original strand, 24385727 - 24385829
Alignment:
Q  16 aaactctacagaaaatctgattctcctcacttggctcttctcctagctttctcttgg-ttttctcccaaaa-actgtttgtacgtg-aaactgcctctga 112  Q
    |||||||||  ||||| |||||||| ||||||||||||||||||||||||||||||| |||||||||||||  ||||||||||||| ||||||| |||||    
T  24385727 aaactctaccaaaaatatgattctcttcacttggctcttctcctagctttctcttggtttttctcccaaaactctgtttgtacgtgaaaactgcttctga 24385826  T
Q  113 ctt 115  Q
    |||    
T  24385827 ctt 24385829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 29 - 131
Target Start/End: Original strand, 23539842 - 23539945
Alignment:
Q  29 aatctgattctcctcacttggctcttctcctagctttctcttggttttctcccaaaa--actgtttgtacgtgaaactgcctctgacttttattttctaa 126  Q
    |||| |||||||| |  ||||||||||||||||||||||||| ||||||||||||||   |||||||||||||||||||  ||||||| ||| ||||||     
T  23539842 aatcagattctccccctttggctcttctcctagctttctctt-gttttctcccaaaacctctgtttgtacgtgaaactggttctgactcttagtttctat 23539940  T
Q  127 ttttc 131  Q
    |||||    
T  23539941 ttttc 23539945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 117 - 223
Target Start/End: Complemental strand, 26360216 - 26360111
Alignment:
Q  117 tattttctaattttctcaataaatataacctcccaatatttaattaactcccacttaattcactaaattctcatttaaccccaaaactccaattaaatcc 216  Q
    |||||||||||| | | ||||||||||| ||||||||||| | || |||||| || |||| ||| ||||||| | ||||||| |||||||||||||||||    
T  26360216 tattttctaattcttt-aataaatataatctcccaatattcactttactccctctaaatttacttaattctcgtataacccccaaactccaattaaatcc 26360118  T
Q  217 taattct 223  Q
    || ||||    
T  26360117 tatttct 26360111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 27 - 103
Target Start/End: Complemental strand, 22757796 - 22757717
Alignment:
Q  27 aaaatctga-ttctcctcacttggctcttctcctagctttctcttgg-ttttctcccaaaa-actgtttgtacgtgaaac 103  Q
    ||||||||| |||||| ||||||||||||||| | |||||||||||| |||||||||||||  |||||||||||||||||    
T  22757796 aaaatctgaattctccccacttggctcttctcttggctttctcttggtttttctcccaaaactctgtttgtacgtgaaac 22757717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 112 - 223
Target Start/End: Complemental strand, 29324335 - 29324225
Alignment:
Q  112 acttttattttctaattttctcaataaatataacctcccaatatttaattaactcccacttaattcactaaattctcatttaaccccaaaactccaatta 211  Q
    |||| |||||||||||| | | ||||||||||| ||||||||||| | || |||||| || | || ||| ||||||| | ||||||| ||||||||||||    
T  29324335 acttctattttctaattcttt-aataaatataatctcccaatattcactttactccccctaagtttacttaattctcgtataacccccaaactccaatta 29324237  T
Q  212 aatcctaattct 223  Q
    ||||||| ||||    
T  29324236 aatcctatttct 29324225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 160 - 223
Target Start/End: Complemental strand, 30344537 - 30344475
Alignment:
Q  160 ttaactcccacttaattcactaaattctcatttaaccccaaaactccaattaaatcctaattct 223  Q
    ||||||||| ||||||||  | ||||||||||||||||| ||||||||||||||||||||||||    
T  30344537 ttaactccc-cttaattctattaattctcatttaaccccgaaactccaattaaatcctaattct 30344475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 102
Target Start/End: Original strand, 43125634 - 43125711
Alignment:
Q  27 aaaatctga-ttctcctcacttggctcttctcctagctttctcttgg-ttttctcccaaaaactgtttgtacgtgaaa 102  Q
    ||||||||| |||||| ||||||||||||||| | |||||||||||| ||||||||||||||||| ||  ||||||||    
T  43125634 aaaatctgaattctccccacttggctcttctcttggctttctcttggtttttctcccaaaaactgcttccacgtgaaa 43125711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 84
Target Start/End: Original strand, 10817902 - 10817945
Alignment:
Q  42 tcacttggctcttctcctagctttctcttgg-ttttctcccaaa 84  Q
    ||||||||||||||||||||||||||||||| ||||||||||||    
T  10817902 tcacttggctcttctcctagctttctcttggtttttctcccaaa 10817945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 84
Target Start/End: Complemental strand, 22777032 - 22776989
Alignment:
Q  42 tcacttggctcttctcctagctttctcttgg-ttttctcccaaa 84  Q
    ||||||||||||||||||||||||||||||| ||||||||||||    
T  22777032 tcacttggctcttctcctagctttctcttggtttttctcccaaa 22776989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 17021913 - 17021864
Alignment:
Q  4 gattgaagaacaaaactctacagaaaatctgattctcctcacttggctct 53  Q
    |||||||| ||| |||||||||||||||||| ||||| ||||||||||||    
T  17021913 gattgaaggacagaactctacagaaaatctggttctcttcacttggctct 17021864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 71
Target Start/End: Complemental strand, 22827800 - 22827735
Alignment:
Q  6 ttgaagaacaaaactctacagaaaatctgattctcctcacttggctcttctcctagctttctcttg 71  Q
    |||||| ||| |||||||||||||||| | ||||| ||||||||||||  || |||||||||||||    
T  22827800 ttgaaggacagaactctacagaaaatccggttctcttcacttggctctcttcttagctttctcttg 22827735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 223
Target Start/End: Original strand, 4398746 - 4398824
Alignment:
Q  146 ctcccaatatttaattaactcccacttaattcactaaattctcatttaacccc-aaaactccaattaaatcctaattct 223  Q
    ||||||||||| | || ||||||||| |||| ||| ||||||| | ||||||| |||||||||||||||| ||| ||||    
T  4398746 ctcccaatattcactttactcccactaaatttacttaattctcgtataaccccaaaaactccaattaaattctatttct 4398824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 21553389 - 21553338
Alignment:
Q  4 gattgaagaacaaaactctacagaaaatctgattctcctcacttggctcttctc 57  Q
    |||||| ||||||||||||| ||||  ||||||||||| |||||||||||||||    
T  21553389 gattgatgaacaaaactctatagaa--tctgattctccccacttggctcttctc 21553338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 223
Target Start/End: Complemental strand, 24276332 - 24276287
Alignment:
Q  177 cactaaattctcatttaaccccaaaactccaattaaatcctaattct 223  Q
    |||| ||||||||||||||||||||||||||| ||||| ||||||||    
T  24276332 cacttaattctcatttaaccccaaaactccaa-taaattctaattct 24276287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 223
Target Start/End: Original strand, 24385881 - 24385926
Alignment:
Q  177 cactaaattctcatttaaccccaaaactccaattaaatcctaattct 223  Q
    |||| ||||||||||||||||||||||||||| ||||| ||||||||    
T  24385881 cacttaattctcatttaaccccaaaactccaa-taaattctaattct 24385926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 85
Target Start/End: Complemental strand, 27868575 - 27868498
Alignment:
Q  7 tgaagaacaaaactctacagaaaatctgattctcctcacttggctcttctcctagctttctcttggttttctcccaaaa 85  Q
    ||||| ||| |||||||||||||||| | ||||| |||||||||||| ||| | | |||||||| | ||||||||||||    
T  27868575 tgaaggacagaactctacagaaaatccggttctcttcacttggctctcctcttggttttctctt-gctttctcccaaaa 27868498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 125; Significance: 2e-64; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 24267899 - 24268122
Alignment:
Q  1 tttgattgaagaacaaaactctacagaaaatctgattctcctcacttggctcttctcctagctttctcttgg-ttttctcccaaaaactgtttgtacgtg 99  Q
    ||||||||||||||||||||||||||||||||| || |||||| |||| ||||||||||||||||||||||| |||||||||||| |||||||| |||||    
T  24267899 tttgattgaagaacaaaactctacagaaaatctaatcctcctcccttgactcttctcctagctttctcttggtttttctcccaaagactgtttgaacgtg 24267998  T
Q  100 aaactgcctctgacttttattttct-aattttctcaataaatataacctcccaatatttaattaactcccacttaattcactaaattctcatttaacccc 198  Q
    ||||||| ||| ||   ||||||||   |||||||| ||||||||| || ||||||||||||||||  |||||||||||||| || ||||||||||||||    
T  24267999 aaactgcttctaac-cctattttctcctttttctcagtaaatataatcttccaatatttaattaacgtccacttaattcacttaactctcatttaacccc 24268097  T
Q  199 aaaactccaattaaatcctaattct 223  Q
    |||||||||||||||||||||||||    
T  24268098 aaaactccaattaaatcctaattct 24268122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 91 - 223
Target Start/End: Original strand, 13765474 - 13765607
Alignment:
Q  91 ttgtacgtgaaa-ctgcctctgacttttattttctaattttctcaataaatataacctcccaatatttaattaactcccacttaattcactaaattctca 189  Q
    |||||||||||| || | |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | || |||    
T  13765474 ttgtacgtgaaaactacttctgacttctattttctaattttcttaataaatataacctcccaatatttaattaactcccacttaattcacttatttatca 13765573  T
Q  190 tttaaccccaaaactccaattaaatcctaattct 223  Q
    |||||||||||||||||||||||||| |||||||    
T  13765574 tttaaccccaaaactccaattaaatcttaattct 13765607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 119 - 220
Target Start/End: Complemental strand, 23610878 - 23610777
Alignment:
Q  119 ttttctaattttctcaataaatataacctcccaatatttaattaactcccacttaattcactaaattctcatttaaccccaaaactccaattaaatccta 218  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||||||||    
T  23610878 ttttctaattttctcaataaatataacctcccaatatttaattaactcccacttaattcacttaattatcaattaaccccaaaactccaattaaatccta 23610779  T
Q  219 at 220  Q
    ||    
T  23610778 at 23610777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 64 - 223
Target Start/End: Original strand, 1588842 - 1589002
Alignment:
Q  64 ttctcttggtttt-ctcccaaaaa-ctgtttgtacgtgaaa-ctgcctctgacttttattttctaattttctcaataaatataacctcccaatatttaat 160  Q
    ||||||||||||| |||||||||  ||||| |||||||||| |||| ||| |||||  |||||||||||||||| |||||||||||||||||||| ||||    
T  1588842 ttctcttggtttttctcccaaaactctgtt-gtacgtgaaaactgcttctaactttg-ttttctaattttctcagtaaatataacctcccaatatctaat 1588939  T
Q  161 taactcccacttaattcactaaattctcatttaaccccaaaactccaattaaatcctaattct 223  Q
    |||||||||||||||||||| |||| | |||||||||||||||||||| ||||| ||||||||    
T  1588940 taactcccacttaattcacttaattattatttaaccccaaaactccaaataaattctaattct 1589002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 4 - 115
Target Start/End: Complemental strand, 1589780 - 1589668
Alignment:
Q  4 gattgaagaacaaaactctacagaaaatctgattctcctcacttggctcttctcctagctttctcttgg-ttttctcccaaaaactgtttgtacgtgaaa 102  Q
    |||||||||||||||||||||| ||||| |||||||| |||||||||||| |||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  1589780 gattgaagaacaaaactctacaaaaaatatgattctcttcacttggctctcctcctagctttctcttggtttttctcccaaaaactgattgtacgtgaaa 1589681  T
Q  103 ctgcctctgactt 115  Q
    |||| || |||||    
T  1589680 ctgcttcagactt 1589668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 4 - 189
Target Start/End: Complemental strand, 29847279 - 29847093
Alignment:
Q  4 gattgaagaacaaaactctacagaaaatctgattctcctcacttggctcttctcctagctttctcttggttttctcccaaaa--actgtttgtacgtgaa 101  Q
    |||||||| ||| |||||||||||||||| | ||||| |||||||||||| ||| | | |||||||| | ||||||||||||   |||||||||||||||    
T  29847279 gattgaaggacataactctacagaaaatccggttctcttcacttggctctcctcttggttttctctt-gctttctcccaaaacttctgtttgtacgtgaa 29847181  T
Q  102 actgcctctgacttttattttct-aattttctcaataaatataacctcccaatatttaattaactcccacttaattcactaaattctca 189  Q
    ||||| ||| ||   ||||||||   |||||||| ||||||||| || |||||||||||||||||||||||||||||||| ||||||||    
T  29847180 actgcttctaac-cctattttctcctttttctcagtaaatataatcttccaatatttaattaactcccacttaattcacttaattctca 29847093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 27 - 223
Target Start/End: Original strand, 1640033 - 1640229
Alignment:
Q  27 aaaatctgattctcctcacttggctcttctcctagctttctcttggtttt-ctcccaaaaactgtttgtacgtgaaactgcctctgactttt--attttc 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||  || ||||||||||||||||| | |||||| |  ||||||    
T  1640033 aaaatctgattctcctcacttggctcttctcctagctttctcttgatttttctcccaaactctatttgtacgtgaaactgcttatgacttctcaattttc 1640132  T
Q  124 -taattttctcaataaatataacctcccaatatttaatt-aactcccacttaattcactaaattctcatttaaccccaaaactccaattaaatcctaatt 221  Q
     |||    |||  ||||  ||||  |||  ||||| ||| ||||||||||||||||||| |||| | |||||||||||||||||||| ||||| ||| ||    
T  1640133 ctaa----ctcc-taaacttaactcccctttattttatttaactcccacttaattcacttaattattatttaaccccaaaactccaaataaattctactt 1640227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 102
Target Start/End: Complemental strand, 16132423 - 16132326
Alignment:
Q  5 attgaagaacaaaactctacagaaaatctgattctcctcacttggctcttctcctagctttctcttgg-ttttctcccaaaaactgtttgtacgtgaaa 102  Q
    ||||| ||||||| ||||||| |||||| |||||||| | |||||||||||||||||||||||||||| |||||||||||||| ||||| |||||||||    
T  16132423 attgatgaacaaagctctaca-aaaatcagattctcccctcttggctcttctcctagctttctcttggtttttctcccaaaaattgtttttacgtgaaa 16132326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 102
Target Start/End: Complemental strand, 19443035 - 19442938
Alignment:
Q  5 attgaagaacaaaactctacagaaaatctgattctcctcacttggctcttctcctagctttctcttgg-ttttctcccaaaaactgtttgtacgtgaaa 102  Q
    ||||| ||| ||| ||||||| |||||| |||||||| | |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  19443035 attgatgaaaaaagctctaca-aaaatcagattctcccctcttggctcttctcctagctttctcttggtttttctcccaaaaactgtttttacgtgaaa 19442938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 5 - 103
Target Start/End: Complemental strand, 21119804 - 21119706
Alignment:
Q  5 attgaagaacaaaactctacagaaaatctgattctcctcacttggctcttctcctagctttctctt-ggttttctcccaaaaactgtttgtacgtgaaac 103  Q
    ||||| ||||||| || |||| ||||||  ||||||| | |||||||||||||||||||||||||| | |||||||||||||||||||| ||||||||||    
T  21119804 attgatgaacaaagctttaca-aaaatcaaattctcccctcttggctcttctcctagctttctcttagtttttctcccaaaaactgtttttacgtgaaac 21119706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 103
Target Start/End: Complemental strand, 5109713 - 5109614
Alignment:
Q  5 attgaagaacaaaactctacagaaaatctgattctcctcacttggctcttctcctagctttctcttggttttctcccaaaa--actgtttgtacgtgaaa 102  Q
    |||||||||||||||||||||||||||||| ||||| |||||||||||| ||| | | |||||||| | ||||||||||||   || |||||||||||||    
T  5109713 attgaagaacaaaactctacagaaaatctggttctcttcacttggctctcctcttggttttctctt-gctttctcccaaaacttctatttgtacgtgaaa 5109615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 91 - 223
Target Start/End: Original strand, 16830779 - 16830912
Alignment:
Q  91 ttgtacgtgaaa-ctgcctctgacttttattttctaattttctcaataaatataacctcccaatatttaattaactcccacttaattcactaaattctca 189  Q
    |||||||||||| |||| | |||||| |||||||||||| | | |||||||||||  ||||| |||| | || ||||||||| |||| ||| |||||||     
T  16830779 ttgtacgtgaaaactgcttgtgacttctattttctaattcttt-aataaatataatttcccagtattcactttactcccactaaatttacttaattctcg 16830877  T
Q  190 tttaacccc-aaaactccaattaaatcctaattct 223  Q
    | ||||||| |||||||||||||||||||| ||||    
T  16830878 tataacccccaaaactccaattaaatcctacttct 16830912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 29 - 131
Target Start/End: Complemental strand, 29415532 - 29415429
Alignment:
Q  29 aatctgattctcctcacttggctcttctcctagctttctcttggttttctcccaaaa--actgtttgtacgtgaaactgcctctgacttttattttctaa 126  Q
    |||| |||||||| |  ||||||||||||||||||||||||| ||||||||||||||   |||||||||||||||||||  ||||||  ||| ||||||     
T  29415532 aatcagattctccccctttggctcttctcctagctttctctt-gttttctcccaaaacctctgtttgtacgtgaaactggttctgacacttagtttctat 29415434  T
Q  127 ttttc 131  Q
    |||||    
T  29415433 ttttc 29415429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 209
Target Start/End: Complemental strand, 1589621 - 1589574
Alignment:
Q  162 aactcccacttaattcactaaattctcatttaaccccaaaactccaat 209  Q
    ||||||||||||||||||| |||| | |||||||||||||||||||||    
T  1589621 aactcccacttaattcacttaattattatttaaccccaaaactccaat 1589574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 223
Target Start/End: Original strand, 8523937 - 8524047
Alignment:
Q  112 acttttattttctaattttctcaataaatataacctcccaatatttaattaactcccacttaattcactaaattctcatttaaccccaaaactccaatta 211  Q
    |||| |||||||||||| | | ||||||||||| ||||||||||| | || |||||| || | || ||| |||||||   ||||||| ||||||||||||    
T  8523937 acttctattttctaattcttt-aataaatataatctcccaatattcactttactccccctaagtttacttaattctcgcataacccccaaactccaatta 8524035  T
Q  212 aatcctaattct 223  Q
    ||||||| ||||    
T  8524036 aatcctatttct 8524047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 14583971 - 14584020
Alignment:
Q  4 gattgaagaacaaaactctacagaaaatctgattctcctcacttggctct 53  Q
    |||||||| ||| |||||||||||||||| ||||||| ||||||||||||    
T  14583971 gattgaaggacataactctacagaaaatccgattctcttcacttggctct 14584020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 135 - 223
Target Start/End: Original strand, 16103370 - 16103459
Alignment:
Q  135 ataaatataacctcccaatatttaattaactcccacttaattcactaaattctcatttaa-ccccaaaactccaattaaatcctaattct 223  Q
    |||||||||| ||||||||||| | || |||||| || |||| ||| ||||||| | ||| ||||| |||||||||||||||||| ||||    
T  16103370 ataaatataatctcccaatattcactttactccccctaaatttacttaattctcgtataacccccagaactccaattaaatcctatttct 16103459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 223
Target Start/End: Original strand, 29493781 - 29493869
Alignment:
Q  135 ataaatataacctcccaatatttaattaactcccacttaattcactaaattctcatttaaccccaaaactccaattaaatcctaattct 223  Q
    ||||||| || ||||||||||| | || |||||| || | || ||| ||||||| | ||||||| ||||||||||||||||||| ||||    
T  29493781 ataaatacaatctcccaatattcattttactccctctaagtttacttaattctcgtataacccccaaactccaattaaatcctatttct 29493869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 137 - 223
Target Start/End: Original strand, 12596989 - 12597076
Alignment:
Q  137 aaatataacctcccaatatttaattaactcccacttaattcactaaattctcatttaa-ccccaaaactccaattaaatcctaattct 223  Q
    |||||||| ||||||||||| | || |||||| || |||| ||| ||||||| | ||| ||||| |||||||||||||||||| ||||    
T  12596989 aaatataatctcccaatattcactttactccccctaaatttacttaattctcgtataacccccagaactccaattaaatcctatttct 12597076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 57
Target Start/End: Complemental strand, 23225850 - 23225806
Alignment:
Q  11 gaacaaaactctacagaaaatctgattctcctcacttggctcttctc 57  Q
    ||||||||||||||||||  ||||||||||| |||||||||||||||    
T  23225850 gaacaaaactctacagaa--tctgattctccccacttggctcttctc 23225806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 122; Significance: 1e-62; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 5 - 220
Target Start/End: Complemental strand, 20898749 - 20898533
Alignment:
Q  5 attgaagaacaaaactctacagaaaatctgattctcctcacttggctcttctcctagctttctcttggtttt-ctcccaaaaactgtttgtacgtgaaac 103  Q
    ||||| ||||||| ||||||| |||||| |||||||| | |||||||||||||||||||||||||||||||| ||||||||||||||||  |||||||||    
T  20898749 attgatgaacaaatctctaca-aaaatcagattctcccctcttggctcttctcctagctttctcttggtttttctcccaaaaactgttttcacgtgaaac 20898651  T
Q  104 tgcctctgacttttattttctaatttt-ctcaataaatataacctcccaatatttaattaactcccacttaattcactaaattctcatttaaccccaaaa 202  Q
    ||| ||| || ||  ||||||  |||| |||| ||||||||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  20898650 tgcttctaaccttatttttctcctttttctcagtaaatataatctcccaatatttaattaactcccacttaatttacttaattctcatttaaccccaaaa 20898551  T
Q  203 ctccaattaaatcctaat 220  Q
    ||||||||||||||||||    
T  20898550 ctccaattaaatcctaat 20898533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 92 - 223
Target Start/End: Original strand, 14035872 - 14036004
Alignment:
Q  92 tgtacgtgaaa-ctgcctctgacttttattttctaattttctcaataaatataacctcccaatatttaattaactcccacttaattcactaaattctcat 190  Q
    ||||||||||| |||| |||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  14035872 tgtacgtgaaaactgcttctgacttctattttctaattttctcaataaatataaactcccaatatttaattaactcccacttaattcacttaattctcat 14035971  T
Q  191 ttaaccccaaaactccaattaaatcctaattct 223  Q
    |||||||||||||||||||||||||||||||||    
T  14035972 ttaaccccaaaactccaattaaatcctaattct 14036004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 5 - 223
Target Start/End: Complemental strand, 16277279 - 16277060
Alignment:
Q  5 attgaagaacaaaactctacagaaaatctgattctcctcacttggctcttctcctagctttctcttggtttt-ctcccaaaaactgtttgtacgtgaaac 103  Q
    ||||| ||||||| ||||||| |||||| |||||| | | |||| |||||||||||| |||||||||||||| ||||||||||||||||  |||||||||    
T  16277279 attgatgaacaaatctctaca-aaaatcagattcttccctcttgactcttctcctagttttctcttggtttttctcccaaaaactgttttcacgtgaaac 16277181  T
Q  104 tgcctctgacttttattttctaa-ttttctcaataaatataacctcccaatatttaattaactcccacttaattcactaaattctcatttaaccccaaaa 202  Q
    ||| ||| ||  |  ||||||   |||||||| ||||||||  ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  16277180 tgcttctaaccctatttttctcccttttctcagtaaatatattctcccaatatttaattaactcccacttaatttacttaattctcatttaaccccaaaa 16277081  T
Q  203 ctccaattaaatcctaattct 223  Q
    |||||||||||||||||||||    
T  16277080 ctccaattaaatcctaattct 16277060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 91 - 223
Target Start/End: Original strand, 13882512 - 13882645
Alignment:
Q  91 ttgtacgtgaaa-ctgcctctgacttttattttctaattttctcaataaatataacctcccaatatttaattaactcccacttaattcactaaattctca 189  Q
    |||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| | |    
T  13882512 ttgtacgtgaaaactgcttctgacttttattttctaattttctcaataaatataacctcccaatatttaattatctcccacttaattcacttaattatta 13882611  T
Q  190 tttaaccccaaaactccaattaaatcctaattct 223  Q
    ||| ||||||||||||||||||||||||||||||    
T  13882612 tttgaccccaaaactccaattaaatcctaattct 13882645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 91 - 223
Target Start/End: Original strand, 28919804 - 28919937
Alignment:
Q  91 ttgtacgtgaaa-ctgcctctgacttttattttctaattttctcaataaatataacctcccaatatttaattaactcccacttaattcactaaattctca 189  Q
    |||||||||||| |||| |||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||  ||||||||    
T  28919804 ttgtacgtgaaaactgcttctgacttctattttctaattttctcaataaatataacttcccaatatttaattaactcccacctaattcacctaattctca 28919903  T
Q  190 tttaaccccaaaactccaattaaatcctaattct 223  Q
    ||||||||||||||||||||||||||||||||||    
T  28919904 tttaaccccaaaactccaattaaatcctaattct 28919937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 5 - 223
Target Start/End: Original strand, 15991318 - 15991536
Alignment:
Q  5 attgaagaacaaaactctacagaaaatctgattctcctcacttggctcttctcctagctttctcttggtttt-ctcccaaaaactgtttgtacgtgaaac 103  Q
    ||||| ||||||| ||||||| |||||| |||||||| | ||||||||||| ||| |||||||||||||||| | |||||||||||||| ||||||||||    
T  15991318 attgatgaacaaagctctaca-aaaatcagattctcccctcttggctcttcgcctggctttctcttggtttttcccccaaaaactgtttttacgtgaaac 15991416  T
Q  104 tgcctctgacttttattttctaatttt-ctcaataaatataacctcccaatatttaattaactcccacttaattcactaaattctcatttaaccccaaaa 202  Q
    ||| ||| ||  | |||||||  |||| ||   ||||||||| || |||||||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  15991417 tgcttctaaccct-attttctcctttttcttggtaaatataatcttccaatatttaattaactcccacttaatttacttaattctcatttaaccccaaaa 15991515  T
Q  203 ctccaattaaatcctaattct 223  Q
    |||||||||||||||||||||    
T  15991516 ctccaattaaatcctaattct 15991536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 73 - 223
Target Start/End: Original strand, 13878889 - 13879038
Alignment:
Q  73 ttttctcccaaaaactgtttgtacgtgaaa-ctgcctctgacttttattttctaattttctcaataaatataacctcccaatatttaattaactcccact 171  Q
    ||||||||||||| ||||| |||||||||| |||| |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  13878889 ttttctcccaaaa-ctgtt-gtacgtgaaaactgcttctgacttctattttctaattttctcaatgaatataacctcccaatatttaattaactcccact 13878986  T
Q  172 taattcactaaattctcatttaaccccaaaactccaattaaatcctaattct 223  Q
    ||||||||| |||| | |||| ||||||||||||||||||||||||||||||    
T  13878987 taattcacttaattattatttgaccccaaaactccaattaaatcctaattct 13879038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 100 - 223
Target Start/End: Complemental strand, 21188877 - 21188754
Alignment:
Q  100 aaactgcctctgacttttattttctaattttctcaataaatataacctcccaatatttaattaactcccacttaattcactaaattctcatttaacccca 199  Q
    ||||||| |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||    
T  21188877 aaactgcttctgacttctattttctagttttctcaataaatataacctcccaatatttaattaattcccactaaattcacttaattctcatttaacccca 21188778  T
Q  200 aaactccaattaaatcctaattct 223  Q
    ||||||||||||||||||||||||    
T  21188777 aaactccaattaaatcctaattct 21188754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 64 - 223
Target Start/End: Complemental strand, 33661545 - 33661384
Alignment:
Q  64 ttctcttggtttt-ctcccaaaaa-ctgtttgtacgtgaaa-ctgcctctgacttttattttctaattttctcaataaatataacctcccaatatttaat 160  Q
    ||||||||||||| |||||||||  ||||| |||||||||| |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  33661545 ttctcttggtttttctcccaaaactctgtt-gtacgtgaaaactgcttctgacttctattttctaattttctcaataaatataacctcccaatatttaat 33661447  T
Q  161 taactcccacttaattcactaaattctcatttaaccccaaaactccaattaaatcctaattct 223  Q
    ||||||||||| |||||||| |||| | |||| ||||||||||||||||||||||||||||||    
T  33661446 taactcccactcaattcacttaattattatttgaccccaaaactccaattaaatcctaattct 33661384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 14049654 - 14049754
Alignment:
Q  1 tttgattgaagaacaaaactctacagaaaatctgattctcctcacttggctcttctcctagctttctcttggttttctcccaaaaactgtttgtacgtga 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||||||||    
T  14049654 tttgattgaagaacaaaactctacagaaaatctgattctcctcacttggctcttctcctacctttctcttggttttctccc-aaaactgattgtacgtga 14049752  T
Q  101 aa 102  Q
    ||    
T  14049753 aa 14049754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 64 - 223
Target Start/End: Complemental strand, 15447328 - 15447176
Alignment:
Q  64 ttctcttggtttt-ctcccaaaaa-ctgtttgtacgtgaaa-ctgcctctgacttttattttctaattttctcaataaatataacctcccaatatttaat 160  Q
    ||||||||||||| |||||||||  ||||| |||||||||| |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  15447328 ttctcttggtttttctcccaaaactctgtt-gtacgtgaaaactgcttctgacttctattttctaattttctcaataaatataacctcccaatatttaat 15447230  T
Q  161 taactcccacttaattcactaaattctcatttaaccccaaaactccaattaaatcctaattct 223  Q
    ||||||||| ||         ||||||||||||||||||||||||||||||||||||||||||    
T  15447229 taactcccagtt---------aattctcatttaaccccaaaactccaattaaatcctaattct 15447176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 30147991 - 30148092
Alignment:
Q  1 tttgattgaagaacaaaactctacagaaaatctgattctcctcacttggctcttctcctagctttctcttggttttctcccaaaaactgtttgtacgtga 100  Q
    ||||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||| ||||||||||    
T  30147991 tttgattgaagaataaaactcttcagaaaatctgattctcctcacttgtctcttctcctagctttctcttggttttct-cctaaaactgattgtacgtga 30148089  T
Q  101 aac 103  Q
    |||    
T  30148090 aac 30148092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 4 - 223
Target Start/End: Original strand, 18230792 - 18231011
Alignment:
Q  4 gattgaagaacaaaactctacagaaaatctgattctcctcacttggctcttctcctagctttctcttggtttt-ctcccaaaaactgtttgtacgtgaaa 102  Q
    |||||| ||| ||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||  ||||||||||||||||    
T  18230792 gattgatgaataaaactctaccaaaaatctgattctccccacttggctcttctcctagctttctcttggtttttctcccaaactctgtttgtacgtgaaa 18230891  T
Q  103 ctgcctctgactttt--attttc-taattttctcaataaatataacctcccaatatttaatt-aactcccacttaattcactaaattctcatttaacccc 198  Q
    |||| |||||||| |  |||||| |||    |||  ||||  ||||  |||  ||||| ||| ||||||||||||||||||| ||||   ||||||||||    
T  18230892 ctgcttctgacttctcaattttcctaa----ctcc-taaacttaactcccctttattttatttaactcccacttaattcacttaattactatttaacccc 18230986  T
Q  199 aaaactccaattaaatcctaattct 223  Q
    |||||||||| ||||| ||||||||    
T  18230987 aaaactccaaataaattctaattct 18231011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 102
Target Start/End: Complemental strand, 12729844 - 12729747
Alignment:
Q  5 attgaagaacaaaactctacagaaaatctgattctcctcacttggctcttctcctagctttctcttgg-ttttctcccaaaaactgtttgtacgtgaaa 102  Q
    ||||| ||||||| ||||||| |||||| |||||||| | |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  12729844 attgatgaacaaagctctaca-aaaatcagattctcccctcttggctcttctcctagctttctcttggtttttctcccaaaaactgtttatacgtgaaa 12729747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 11 - 85
Target Start/End: Original strand, 14912145 - 14912217
Alignment:
Q  11 gaacaaaactctacagaaaatctgattctcctcacttggctcttctcctagctttctcttggttttctcccaaaa 85  Q
    ||||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  14912145 gaacaaagctctaca-aaaatctgattctcctcccttggctcttctcctagctttctctt-gttttctcccaaaa 14912217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 29 - 131
Target Start/End: Complemental strand, 4830133 - 4830030
Alignment:
Q  29 aatctgattctcctcacttggctcttctcctagctttctcttggttttctcccaaaa--actgtttgtacgtgaaactgcctctgacttttattttctaa 126  Q
    |||| |||||||| |  ||||||||||||||||||||||||| ||||||||||||||   |||||||||||||||||||  ||||||| ||| ||||||     
T  4830133 aatcagattctccccctttggctcttctcctagctttctctt-gttttctcccaaaacctctgtttgtacgtgaaactggttctgactcttagtttctat 4830035  T
Q  127 ttttc 131  Q
    |||||    
T  4830034 ttttc 4830030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 29 - 131
Target Start/End: Complemental strand, 4833428 - 4833325
Alignment:
Q  29 aatctgattctcctcacttggctcttctcctagctttctcttggttttctcccaaaa--actgtttgtacgtgaaactgcctctgacttttattttctaa 126  Q
    |||| |||||||| |  ||||||||||||||||||||||||| ||||||||||||||   |||||||||||||||||||  ||||||| ||| ||||||     
T  4833428 aatcagattctccccctttggctcttctcctagctttctctt-gttttctcccaaaacctctgtttgtacgtgaaactggttctgactcttagtttctat 4833330  T
Q  127 ttttc 131  Q
    |||||    
T  4833329 ttttc 4833325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 117 - 223
Target Start/End: Complemental strand, 15279207 - 15279102
Alignment:
Q  117 tattttctaattttctcaataaatataacctcccaatatttaattaactcccacttaattcactaaattctcatttaaccccaaaactccaattaaatcc 216  Q
    |||||||||||| | | ||||||||||| ||||||||||| | || |||||| || |||| ||| ||||||| | ||||||| |||||||||||||||||    
T  15279207 tattttctaattcttt-aataaatataatctcccaatattcactttactccctctaaatttacttaattctcgtataacccccaaactccaattaaatcc 15279109  T
Q  217 taattct 223  Q
    || ||||    
T  15279108 tatttct 15279102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 29 - 131
Target Start/End: Complemental strand, 15747532 - 15747429
Alignment:
Q  29 aatctgattctcctcacttggctcttctcctagctttctcttggttttctcccaaaa--actgtttgtacgtgaaactgcctctgacttttattttctaa 126  Q
    |||| |||||||| |  ||||||||||||||||||||||||| ||||||||||||||   |||||||||||||||||||  ||||||| | | ||||||     
T  15747532 aatcagattctccccctttggctcttctcctagctttctctt-gttttctcccaaaatctctgtttgtacgtgaaactggttctgactctcagtttctat 15747434  T
Q  127 ttttc 131  Q
    |||||    
T  15747433 ttttc 15747429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 112 - 223
Target Start/End: Original strand, 288097 - 288207
Alignment:
Q  112 acttttattttctaattttctcaataaatataacctcccaatatttaattaactcccacttaattcactaaattctcatttaaccccaaaactccaatta 211  Q
    |||| |||||||||||| | | ||||||||||| ||||||||||| | || |||||| || | || ||| ||||||| | ||||||| ||||||||||||    
T  288097 acttctattttctaattcttt-aataaatataatctcccaatattcactttactccccctaagtttacttaattctcgtataacccccaaactccaatta 288195  T
Q  212 aatcctaattct 223  Q
    ||||||| ||||    
T  288196 aatcctatttct 288207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 29 - 105
Target Start/End: Complemental strand, 24046455 - 24046378
Alignment:
Q  29 aatctgattctcctcacttggctcttctcctagctttctcttggttttctcccaaaa--actgtttgtacgtgaaactg 105  Q
    |||| |||||||| |  ||||||||||||||||||||||||| ||||||||||||||   |||||||||||||||||||    
T  24046455 aatcagattctccccctttggctcttctcctagctttctctt-gttttctcccaaaacctctgtttgtacgtgaaactg 24046378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 155 - 208
Target Start/End: Complemental strand, 3863148 - 3863095
Alignment:
Q  155 tttaattaactcccacttaattcactaaattctcatttaaccccaaaactccaa 208  Q
    |||||||||||||||||||||||  | |||||| ||||||||||||||||||||    
T  3863148 tttaattaactcccacttaattctattaattcttatttaaccccaaaactccaa 3863095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 155 - 208
Target Start/End: Complemental strand, 3871905 - 3871852
Alignment:
Q  155 tttaattaactcccacttaattcactaaattctcatttaaccccaaaactccaa 208  Q
    |||||||||||||||||||||||  | |||||| ||||||||||||||||||||    
T  3871905 tttaattaactcccacttaattctattaattcttatttaaccccaaaactccaa 3871852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 6516267 - 6516323
Alignment:
Q  167 ccacttaattcactaaattctcatttaaccccaaaactccaattaaatcctaattct 223  Q
    |||||||||||||| |||||| |||||||||||||||| ||| ||||| ||||||||    
T  6516267 ccacttaattcacttaattcttatttaaccccaaaacttcaaataaattctaattct 6516323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 27 - 89
Target Start/End: Complemental strand, 31116234 - 31116170
Alignment:
Q  27 aaaatctga-ttctcctcacttggctcttctcctagctttctcttgg-ttttctcccaaaaactg 89  Q
    ||||||||| |||||| ||||||||||||||| | |||||||||||| |||||||||||||||||    
T  31116234 aaaatctgaattctccccacttggctcttctcttggctttctcttggtttttctcccaaaaactg 31116170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 42 - 76
Target Start/End: Original strand, 6512710 - 6512744
Alignment:
Q  42 tcacttggctcttctcctagctttctcttggtttt 76  Q
    |||||||||||||||||||||||||||||||||||    
T  6512710 tcacttggctcttctcctagctttctcttggtttt 6512744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 155 - 209
Target Start/End: Complemental strand, 15239675 - 15239621
Alignment:
Q  155 tttaattaactcccacttaattcactaaattctcatttaaccccaaaactccaat 209  Q
    |||||||||||||||||||||||||| |||| | ||| | |||||||||||||||    
T  15239675 tttaattaactcccacttaattcacttaattataattaacccccaaaactccaat 15239621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 155 - 209
Target Start/End: Complemental strand, 16370583 - 16370529
Alignment:
Q  155 tttaattaactcccacttaattcactaaattctcatttaaccccaaaactccaat 209  Q
    |||| ||||||||||||||||||||| ||||   |||||||||||||||||||||    
T  16370583 tttatttaactcccacttaattcacttaattaatatttaaccccaaaactccaat 16370529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 135 - 223
Target Start/End: Original strand, 28383851 - 28383940
Alignment:
Q  135 ataaatataacctcccaatatttaattaactcccacttaattcactaaattctcatttaa-ccccaaaactccaattaaatcctaattct 223  Q
    |||||||||| ||||||||||| | || |||||| || |||| ||| ||||||| | ||| ||||| |||||||||||||||||| ||||    
T  28383851 ataaatataatctcccaatattcactttactccccctaaatttacttaattctcgtataacccccagaactccaattaaatcctatttct 28383940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 91 - 201
Target Start/End: Complemental strand, 13043703 - 13043595
Alignment:
Q  91 ttgtacgtgaaa-ctgcctctgacttttattttctaattttctcaataaatataacctcccaatatttaattaactcccacttaattcactaaattctca 189  Q
    |||||||||||| |||| |||||||| |||||||||||| | | |||||||||||||||| |||| ||  |||||| || ||||||||  | |||||| |    
T  13043703 ttgtacgtgaaaactgcttctgacttctattttctaattct-ttaataaatataacctcctaata-ttccttaact-cctcttaattctattaattctaa 13043607  T
Q  190 tttaaccccaaa 201  Q
    ||||||||||||    
T  13043606 tttaaccccaaa 13043595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 112 - 223
Target Start/End: Original strand, 13745745 - 13745855
Alignment:
Q  112 acttttattttctaattttctcaataaatataacctcccaatatttaattaactcccacttaattcactaaattctcatttaaccccaaaactccaatta 211  Q
    |||| |||||||||||| | | ||||||||||| ||||||||||| | ||  ||||| || | || ||| ||||||| | ||||||| ||| ||||||||    
T  13745745 acttctattttctaattcttt-aataaatataatctcccaatattcactttcctccccctaagtttacttaattctcgtataacccccaaattccaatta 13745843  T
Q  212 aatcctaattct 223  Q
    ||||||| ||||    
T  13745844 aatcctatttct 13745855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 209
Target Start/End: Complemental strand, 15413745 - 15413691
Alignment:
Q  155 tttaattaactcccacttaattcactaaattctcatttaaccccaaaactccaat 209  Q
    ||||||||||||||||||||||| || ||||   |||||||||| ||||||||||    
T  15413745 tttaattaactcccacttaattctcttaattaatatttaacccccaaactccaat 15413691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 102
Target Start/End: Complemental strand, 56114740 - 56114662
Alignment:
Q  27 aaaatctga-ttctcctcacttggctcttctcctagctttctcttgg-ttttctcccaaaa-actgtttgtacgtgaaa 102  Q
    ||||||||| |||||| ||||||||||||||| |  ||||||||||| |||||||||||||  |||||||||| |||||    
T  56114740 aaaatctgaattctccccacttggctcttctcttgactttctcttggtttttctcccaaaactctgtttgtacatgaaa 56114662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 121; Significance: 4e-62; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 5 - 223
Target Start/End: Complemental strand, 11407 - 11188
Alignment:
Q  5 attgaagaacaaaactctacagaaaatctgattctcctcacttggctcttctcctagctttctcttgg-ttttctcccaaaaactgtttgtacgtgaaac 103  Q
    ||||| |||| |||||||||  |||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||    
T  11407 attgatgaaccaaactctaccaaaaatctgattctcttcacttgactcttctcctagctttctcttggtttttctcccaaaaattgtttgtacgtgaaac 11308  T
Q  104 tgcctctgacttttattttct-aattttctcaataaatataacctcccaatatttaattaactcccacttaattcactaaattctcatttaaccccaaaa 202  Q
    ||| ||| ||  |||||| ||   |||||||| ||||||||| || |||||||||||||||||||| ||||||||||| |||||||||||| ||||||||    
T  11307 tgcttctaac-cttatttactcctttttctcagtaaatataatcttccaatatttaattaactccctcttaattcacttaattctcatttagccccaaaa 11209  T
Q  203 ctccaattaaatcctaattct 223  Q
    |||||||||||||||||||||    
T  11208 ctccaattaaatcctaattct 11188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0481 (Bit Score: 117; Significance: 1e-59; HSPs: 1)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 677 - 454
Alignment:
Q  1 tttgattgaagaacaaaactctacagaaaatctgattctcctcacttggctcttctcctagctttctcttg-gttttctcccaaaaactgtttgtacgtg 99  Q
    ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| ||||||||||  |||||||||||||| ||||||||||||    
T  677 tttgattgaagaacaaaactctacagaaaatctgattcttctcccttggctcttctcctaactttctcttgatttttctcccaaaaattgtttgtacgtg 578  T
Q  100 aaactgcctctgacttttattttct-aattttctcaataaatataacctcccaatatttaattaactcccacttaattcactaaattctcatttaacccc 198  Q
    ||||||| ||| ||   | ||||||   |||||||| ||||||||| || | |||||||||||||| ||||||||||||||| ||||||||||||||| |    
T  577 aaactgcttctaac-cctcttttctcctttttctcagtaaatataatcttctaatatttaattaacgcccacttaattcacttaattctcatttaacctc 479  T
Q  199 aaaactccaattaaatcctaattct 223  Q
    ||||||| ||||||||| |||||||    
T  478 aaaactcaaattaaatcttaattct 454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 117; Significance: 1e-59; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 5 - 223
Target Start/End: Original strand, 13898524 - 13898742
Alignment:
Q  5 attgaagaacaaaactctacagaaaatctgattctcctcacttggctcttctcctagctttctcttgg-ttttctcccaaaaactgtttgtacgtgaaac 103  Q
    ||||| ||||||| ||||||| |||||| |||||||| | |||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||    
T  13898524 attgatgaacaaagctctaca-aaaatcagattctcccctcttggctcttctcctagctttctcatggtttttctcccaaaaactgtttttacgtgaaac 13898622  T
Q  104 tgcctctgacttttattttct-aattttctcaataaatataacctcccaatatttaattaactcccacttaattcactaaattctcatttaaccccaaaa 202  Q
    ||| ||| ||   ||||||||   |||||||| ||||||||| || |||||||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  13898623 tgcttctaac-cctattttctcctttttctcagtaaatataatcttccaatatttaattaactcccacttaatttacttaattctcatttaaccccaaaa 13898721  T
Q  203 ctccaattaaatcctaattct 223  Q
    |||||||||||||||||||||    
T  13898722 ctccaattaaatcctaattct 13898742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 5 - 223
Target Start/End: Original strand, 15214606 - 15214824
Alignment:
Q  5 attgaagaacaaaactctacagaaaatctgattctcctcacttggctcttctcctagctttctcttgg-ttttctcccaaaaactgtttgtacgtgaaac 103  Q
    ||||| ||||| | ||||||| |||||| |||||||| | ||||||||||||| |||||||||||||| |||||||||||||||||||| ||||||||||    
T  15214606 attgatgaacacagctctaca-aaaatcagattctcccctcttggctcttctcgtagctttctcttggtttttctcccaaaaactgtttttacgtgaaac 15214704  T
Q  104 tgcctctgacttttattttct-aattttctcaataaatataacctcccaatatttaattaactcccacttaattcactaaattctcatttaaccccaaaa 202  Q
    ||| ||| ||   ||||||||   |||||||| ||||||||| || |||||||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  15214705 tgcttctaac-cctattttctcctttttctcagtaaatataatcttccaatatttaattaactcccacttaatttacttaattctcatttaaccccaaaa 15214803  T
Q  203 ctccaattaaatcctaattct 223  Q
    |||||||||||||||||||||    
T  15214804 ctccaattaaatcctaattct 15214824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 91 - 223
Target Start/End: Complemental strand, 14190816 - 14190683
Alignment:
Q  91 ttgtacgtgaaa-ctgcctctgacttttattttctaattttctcaataaatataacctcccaatatttaattaactcccacttaattcactaaattctca 189  Q
    |||||||||||| |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  14190816 ttgtacgtgaaaactgcttctgacttctattttctaattttctcaataaatataacctcccaatatttaattaactcccacttaattcacttaattctca 14190717  T
Q  190 tttaaccccaaaactccaattaaatcctaattct 223  Q
    ||||||| ||||||||||||||||||||||||||    
T  14190716 tttaacctcaaaactccaattaaatcctaattct 14190683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 11 - 223
Target Start/End: Original strand, 48744588 - 48744800
Alignment:
Q  11 gaacaaaactctacagaaaatctgattctcctcacttggctcttctcctagctttctcttgg-ttttctcccaaaaactgtttgtacgtgaaactgcctc 109  Q
    ||||||| ||||||| |||||| |||||||| |  ||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||||| ||    
T  48744588 gaacaaagctctaca-aaaatcagattctccactattggctcttctcctagctttctcttggtttttcccccaaaaactgtttttacgtgaaactgcttc 48744686  T
Q  110 tgacttttattttct-aattttctcaataaatataacctcccaatatttaattaactcccacttaattcactaaattctcatttaaccccaaaactccaa 208  Q
    | ||   ||||||||   |||||||| |||||||||  | |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||    
T  48744687 taac-cctattttctcctttttctcagtaaatataatattccaatatttaattaactcccacttaattaacttaattctcatttaaccccaaaactccaa 48744785  T
Q  209 ttaaatcctaattct 223  Q
    |||||||||||||||    
T  48744786 ttaaatcctaattct 48744800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 91 - 223
Target Start/End: Complemental strand, 16250149 - 16250015
Alignment:
Q  91 ttgtacgtgaaa-ctgcctctgacttttattttctaattttct-caataaatataacctcccaatatttaattaactcccacttaattcactaaattctc 188  Q
    |||||||||||| |||| |||||||| |||||||||||||| | ||||||||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  16250149 ttgtacgtgaaaactgcttctgacttatattttctaatttttttcaataaatataaccttccaatatttaattaactcccacttaattcacttaattctc 16250050  T
Q  189 atttaaccccaaaactccaattaaatcctaattct 223  Q
    |||||||||||||||||||||||||||||||||||    
T  16250049 atttaaccccaaaactccaattaaatcctaattct 16250015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 91 - 222
Target Start/End: Complemental strand, 46681252 - 46681119
Alignment:
Q  91 ttgtacgtgaaa-ctgcctctgacttttattttctaatttt-ctcaataaatataacctcccaatatttaattaactcccacttaattcactaaattctc 188  Q
    |||||||||||| |||| |||||||| |||||||||||||| ||||||||||||||| |||||| ||||||||||||||||| ||||| ||| |||||||    
T  46681252 ttgtacgtgaaaactgcttctgacttctattttctaatttttctcaataaatataacttcccaaaatttaattaactcccacctaattaacttaattctc 46681153  T
Q  189 atttaaccccaaaactccaattaaatcctaattc 222  Q
    ||||||||||||||||||||||||||||||||||    
T  46681152 atttaaccccaaaactccaattaaatcctaattc 46681119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 136 - 223
Target Start/End: Original strand, 16574423 - 16574510
Alignment:
Q  136 taaatataacctcccaatatttaattaactcccacttaattcactaaattctcatttaaccccaaaactccaattaaatcctaattct 223  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  16574423 taaatataacctcccaatatttaattaactcccacttaattcacttaattctcatttaaccccaaaactccaattaaatcctaattct 16574510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 136 - 223
Target Start/End: Complemental strand, 16591239 - 16591152
Alignment:
Q  136 taaatataacctcccaatatttaattaactcccacttaattcactaaattctcatttaaccccaaaactccaattaaatcctaattct 223  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  16591239 taaatataacctcccaatatttaattaactcccacttaattcacttaattctcatttaaccccaaaactccaattaaatcctaattct 16591152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 64 - 223
Target Start/End: Complemental strand, 15727319 - 15727159
Alignment:
Q  64 ttctcttggtttt-ctcccaaaaa-ctgtttgtacgtgaaa-ctgcctctgacttttattttctaattttctcaataaatataacctcccaatatttaat 160  Q
    ||||||||||||| |||||||||  ||||| |||||||||| |||| ||| |||||  |||||||||||||||| |||||||||||||||||||| ||||    
T  15727319 ttctcttggtttttctcccaaaactctgtt-gtacgtgaaaactgcttctaactttg-ttttctaattttctcagtaaatataacctcccaatatctaat 15727222  T
Q  161 taactcccacttaattcactaaattctcatttaaccccaaaactccaattaaatcctaattct 223  Q
    |||||||||||||||||||| |||| | |||||||||||||||||||| ||||| ||||||||    
T  15727221 taactcccacttaattcacttaattattatttaaccccaaaactccaaataaattctaattct 15727159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 16107861 - 16107760
Alignment:
Q  1 tttgattgaagaacaaaactctacagaaaatctgattctcctcacttggctcttctcctagctttctcttggttttctcccaaaaactgtttgtacgtga 100  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||| ||||    
T  16107861 tttgattgaagaacaaaactctacagaaaatctgattatcctcacctggctcttctcctagctttctcttggttttctccc-aaaactgattgtaggtga 16107763  T
Q  101 aac 103  Q
    |||    
T  16107762 aac 16107760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 91 - 223
Target Start/End: Complemental strand, 14188218 - 14188094
Alignment:
Q  91 ttgtacgtgaaa-ctgcctctgacttttattttctaattttctcaataaatataacctcccaatatttaattaactcccacttaattcactaaattctca 189  Q
    |||||||||||| |||| |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||| |         ||||||||    
T  14188218 ttgtacgtgaaaactgcttctgacttctattttctaattttcttaataaatataacctcccaatatttaattaactcccacgt---------aattctca 14188128  T
Q  190 tttaaccccaaaactccaattaaatcctaattct 223  Q
    ||||||||||||||||||||||||||||||||||    
T  14188127 tttaaccccaaaactccaattaaatcctaattct 14188094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 4 - 115
Target Start/End: Original strand, 15726381 - 15726493
Alignment:
Q  4 gattgaagaacaaaactctacagaaaatctgattctcctcacttggctcttctcctagctttctcttgg-ttttctcccaaaaactgtttgtacgtgaaa 102  Q
    |||||||||||||||||||||| ||||| |||||||| |||||||||||| |||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  15726381 gattgaagaacaaaactctacaaaaaatatgattctcttcacttggctctcctcctagctttctcttggtttttctcccaaaaactgattgtacgtgaaa 15726480  T
Q  103 ctgcctctgactt 115  Q
    |||| || |||||    
T  15726481 ctgcttcagactt 15726493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 4 - 131
Target Start/End: Original strand, 13256744 - 13256873
Alignment:
Q  4 gattgaagaacaaaactctacagaaaatctgattctcctcacttggctcttctcctagctttctcttggttttctcccaaaa--actgtttgtacgtgaa 101  Q
    |||||| ||| ||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||    
T  13256744 gattgatgaataaaactctaccaaaaatctgattctccccacttggctcttctcctagctttctcttggttttctcccaaaacctctgtttgtacgtgaa 13256843  T
Q  102 actgcctctgacttttattttctaattttc 131  Q
    ||||  ||||||| ||| |||||| |||||    
T  13256844 actggttctgactcttagtttctatttttc 13256873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 102
Target Start/End: Complemental strand, 10638584 - 10638487
Alignment:
Q  5 attgaagaacaaaactctacagaaaatctgattctcctcacttggctcttctcctagctttctcttgg-ttttctcccaaaaactgtttgtacgtgaaa 102  Q
    ||||| ||||||| ||||||| |||||  |||||||| | |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  10638584 attgatgaacaaagctctaca-aaaattagattctcccctcttggctcttctcctagctttctcttggtttttctcccaaaaactgtttttacgtgaaa 10638487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 11 - 102
Target Start/End: Complemental strand, 8249242 - 8249151
Alignment:
Q  11 gaacaaaactctacagaaaatctgattctcctcacttggctcttctcctagctttctcttgg-ttttctcccaaaaactgtttgtacgtgaaa 102  Q
    ||||||| ||||||| |||||| |||||||| | |||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||    
T  8249242 gaacaaagctctaca-aaaatcagattctcccctcttggctcttctcctagctttctcttggtttttctccgaaaaactgtttttacgtgaaa 8249151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 92
Target Start/End: Complemental strand, 10628889 - 10628802
Alignment:
Q  5 attgaagaacaaaactctacagaaaatctgattctcctcacttggctcttctcctagctttctcttgg-ttttctcccaaaaactgttt 92  Q
    ||||| ||||||| ||||||| |||||  |||||||| | |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  10628889 attgatgaacaaagctctaca-aaaattagattctcccctcttggctcttctcctagctttctcttggtttttctcccaaaaactgttt 10628802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 4 - 85
Target Start/End: Original strand, 23556398 - 23556478
Alignment:
Q  4 gattgaagaacaaaactctacagaaaatctgattctcctcacttggctcttctcctagctttctcttgg-ttttctcccaaaa 85  Q
    |||||| ||||||| ||||||||||  ||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||    
T  23556398 gattgatgaacaaagctctacagaa--tctgattctccccacttggctcttctcttagctttctcttggtttttctcccaaaa 23556478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 45 - 102
Target Start/End: Complemental strand, 10634482 - 10634424
Alignment:
Q  45 cttggctcttctcctagctttctcttgg-ttttctcccaaaaactgtttgtacgtgaaa 102  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  10634482 cttggctcttctcctagctttctcttggtttttctcccaaaaactgtttttacgtgaaa 10634424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 117 - 223
Target Start/End: Complemental strand, 13732647 - 13732542
Alignment:
Q  117 tattttctaattttctcaataaatataacctcccaatatttaattaactcccacttaattcactaaattctcatttaaccccaaaactccaattaaatcc 216  Q
    |||||||||||| | | ||||||||||| ||||||||||| | || |||||| || |||| ||| ||||||| | ||||||| |||||||||||||||||    
T  13732647 tattttctaattcttt-aataaatataatctcccaatattcactttactccctctaaatttacttaattctcgtataacccccaaactccaattaaatcc 13732549  T
Q  217 taattct 223  Q
    || ||||    
T  13732548 tatttct 13732542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 29 - 131
Target Start/End: Original strand, 34958638 - 34958741
Alignment:
Q  29 aatctgattctcctcacttggctcttctcctagctttctcttggttttctcccaaaa--actgtttgtacgtgaaactgcctctgacttttattttctaa 126  Q
    |||| |||||||| |  ||||||||||||||||||||||||| ||||||||||||||   |||||||||||||||||||  ||||||| | | ||||||     
T  34958638 aatcagattctccccctttggctcttctcctagctttctctt-gttttctcccaaaacttctgtttgtacgtgaaactggttctgactctcagtttctat 34958736  T
Q  127 ttttc 131  Q
    |||||    
T  34958737 ttttc 34958741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 112 - 223
Target Start/End: Original strand, 16007436 - 16007546
Alignment:
Q  112 acttttattttctaattttctcaataaatataacctcccaatatttaattaactcccacttaattcactaaattctcatttaaccccaaaactccaatta 211  Q
    |||| |||||||||||| | | ||||||||||| ||||||||||| | || |||||| || | || ||| ||||||| | ||||||| ||||||||||||    
T  16007436 acttctattttctaattcttt-aataaatataatctcccaatattcactttactccccctaagtttacttaattctcgtataacccccaaactccaatta 16007534  T
Q  212 aatcctaattct 223  Q
    ||||||| ||||    
T  16007535 aatcctatttct 16007546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 112 - 223
Target Start/End: Original strand, 48786320 - 48786430
Alignment:
Q  112 acttttattttctaattttctcaataaatataacctcccaatatttaattaactcccacttaattcactaaattctcatttaaccccaaaactccaatta 211  Q
    |||| |||||||||||| | | ||||||||||| ||||||||||| | || |||||| || | || ||| ||||||| | ||||||| ||||||||||||    
T  48786320 acttctattttctaattcttt-aataaatataatctcccaatattcactttactccccctaagtttacttaattctcgtataacccccaaactccaatta 48786418  T
Q  212 aatcctaattct 223  Q
    ||||||| ||||    
T  48786419 aatcctatttct 48786430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 131
Target Start/End: Complemental strand, 831609 - 831506
Alignment:
Q  29 aatctgattctcctcacttggctcttctcctagctttctcttggttttctcccaaaa--actgtttgtacgtgaaactgcctctgacttttattttctaa 126  Q
    |||| |||||||| |  ||||||||||||||||||||||||| ||||||||||||||   || ||||||||||||||||  ||||||| | | ||||||     
T  831609 aatcagattctccccctttggctcttctcctagctttctctt-gttttctcccaaaacctctatttgtacgtgaaactggttctgactctcagtttctat 831511  T
Q  127 ttttc 131  Q
    |||||    
T  831510 ttttc 831506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 131
Target Start/End: Complemental strand, 1196789 - 1196686
Alignment:
Q  29 aatctgattctcctcacttggctcttctcctagctttctcttggttttctcccaaaa--actgtttgtacgtgaaactgcctctgacttttattttctaa 126  Q
    |||| |||||||| |  ||||||||||||||||||||||||| ||||||||||||||   || ||||||||||||||||  ||||||| | | ||||||     
T  1196789 aatcagattctccccctttggctcttctcctagctttctctt-gttttctcccaaaacctctatttgtacgtgaaactggttctgactctcagtttctat 1196691  T
Q  127 ttttc 131  Q
    |||||    
T  1196690 ttttc 1196686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 102
Target Start/End: Original strand, 8777287 - 8777364
Alignment:
Q  27 aaaatctga-ttctcctcacttggctcttctcctagctttctcttgg-ttttctcccaaaaactgtttgtacgtgaaa 102  Q
    ||||||||| |||||| ||||||||||||||| | |||||||||||| ||||||||||||||||| ||  ||||||||    
T  8777287 aaaatctgaattctccccacttggctcttctcttggctttctcttggtttttctcccaaaaactgcttccacgtgaaa 8777364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 23557587 - 23557657
Alignment:
Q  4 gattgaagaacaaaactctacagaaaatctgattctcctcacttggctcttctcctagctttctcttggtttt 76  Q
    |||||| ||||||| ||||||| ||  ||||||||||| ||||||||||||||| || |||||||||||||||    
T  23557587 gattgatgaacaaagctctacataa--tctgattctccacacttggctcttctcttaactttctcttggtttt 23557657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 105
Target Start/End: Original strand, 11662182 - 11662259
Alignment:
Q  29 aatctgattctcctcacttggctcttctcctagctttctcttggttttctcccaaaa--actgtttgtacgtgaaactg 105  Q
    |||| |||||||| |  ||||||||||||||| ||||||||| ||||||||||||||   |||||||||||||||||||    
T  11662182 aatcagattctccccctttggctcttctcctaactttctctt-gttttctcccaaaacctctgtttgtacgtgaaactg 11662259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 209
Target Start/End: Original strand, 15726540 - 15726587
Alignment:
Q  162 aactcccacttaattcactaaattctcatttaaccccaaaactccaat 209  Q
    ||||||||||||||||||| |||| | |||||||||||||||||||||    
T  15726540 aactcccacttaattcacttaattattatttaaccccaaaactccaat 15726587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 91 - 201
Target Start/End: Original strand, 35367207 - 35367315
Alignment:
Q  91 ttgtacgtgaaa-ctgcctctgacttttattttctaattttctcaataaatataacctcccaatatttaattaactcccacttaattcactaaattctca 189  Q
    |||||||||||| |||| |||||||| |||||||||||| | | ||||||||||||||||||||| ||  |||||| || ||||||||  | |||||| |    
T  35367207 ttgtacgtgaaaactgcttctgacttctattttctaattcttt-aataaatataacctcccaata-ttccttaact-cctcttaattctattaattctaa 35367303  T
Q  190 tttaaccccaaa 201  Q
    ||||||||||||    
T  35367304 tttaaccccaaa 35367315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 85
Target Start/End: Complemental strand, 14105429 - 14105349
Alignment:
Q  4 gattgaagaacaaaactctacagaaaatctgattctcctcacttggctcttctcctagctttctcttggttttctcccaaaa 85  Q
    |||||||| ||| |||||||||||||||| | ||||| |||||||||||| ||| | | |||||||| | ||||||||||||    
T  14105429 gattgaaggacagaactctacagaaaatccggttctcttcacttggctctcctcttggttttctctt-gctttctcccaaaa 14105349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 85
Target Start/End: Complemental strand, 14415446 - 14415366
Alignment:
Q  4 gattgaagaacaaaactctacagaaaatctgattctcctcacttggctcttctcctagctttctcttggttttctcccaaaa 85  Q
    |||||||| ||| |||||||||||||||| | ||||| |||||||||||| ||| | | |||||||| | ||||||||||||    
T  14415446 gattgaaggacagaactctacagaaaatccggttctcttcacttggctctcctcttggttttctctt-gctttctcccaaaa 14415366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 223
Target Start/End: Original strand, 7530323 - 7530391
Alignment:
Q  155 tttaattaactcccacttaattcactaaattctcatttaaccccaaaactccaattaaatcctaattct 223  Q
    |||| ||||||||||||||||||||| ||||   | |||||||||||||||||| |||||  |||||||    
T  7530323 tttatttaactcccacttaattcacttaattaataattaaccccaaaactccaaataaattataattct 7530391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 88
Target Start/End: Complemental strand, 21518298 - 21518224
Alignment:
Q  12 aacaaaactctacagaaaatctgattctcctcacttggctcttctcctagctttctcttggttttctcccaaaaact 88  Q
    ||||||||||| || |||||| || |||||   |||||||||||||||||||||||||| |||||||||| ||||||    
T  21518298 aacaaaactctcca-aaaatcagaatctcccttcttggctcttctcctagctttctctt-gttttctccccaaaact 21518224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 156
Target Start/End: Complemental strand, 21064350 - 21064285
Alignment:
Q  91 ttgtacgtgaaa-ctgcctctgacttttattttctaattttctcaataaatataacctcccaatatt 156  Q
    |||||||||||| |||| |||||||| |||||||||||| | | ||||||||| |||||||||||||    
T  21064350 ttgtacgtgaaaactgcttctgacttctattttctaattct-ttaataaatattacctcccaatatt 21064285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 100 - 201
Target Start/End: Complemental strand, 16922090 - 16921992
Alignment:
Q  100 aaactgcctctgacttttattttctaattttctcaataaatataacctcccaatatttaattaactcccacttaattcactaaattctcatttaacccca 199  Q
    ||||||| ||| |||| |||||||||||| | | ||||||||||||||||||||| ||  |||||| || ||||||||  | |||||| |||||||||||    
T  16922090 aaactgcttctaacttctattttctaattcttt-aataaatataacctcccaata-ttccttaact-cctcttaattctattaattctgatttaacccca 16921994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 100 - 201
Target Start/End: Complemental strand, 16929183 - 16929085
Alignment:
Q  100 aaactgcctctgacttttattttctaattttctcaataaatataacctcccaatatttaattaactcccacttaattcactaaattctcatttaacccca 199  Q
    ||||||| ||| |||| |||||||||||| | | ||||||||||||||||||||| ||  |||||| || ||||||||  | |||||| |||||||||||    
T  16929183 aaactgcttctaacttctattttctaattcttt-aataaatataacctcccaata-ttctttaact-cctcttaattctattaattctgatttaacccca 16929087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 105
Target Start/End: Complemental strand, 16667535 - 16667503
Alignment:
Q  73 ttttctcccaaaaactgtttgtacgtgaaactg 105  Q
    |||||||||||||||||||||||||| ||||||    
T  16667535 ttttctcccaaaaactgtttgtacgtaaaactg 16667503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 105
Target Start/End: Complemental strand, 17641905 - 17641873
Alignment:
Q  73 ttttctcccaaaaactgtttgtacgtgaaactg 105  Q
    |||||||||||||||||||||||||| ||||||    
T  17641905 ttttctcccaaaaactgtttgtacgtaaaactg 17641873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 115; Significance: 2e-58; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 34 - 223
Target Start/End: Original strand, 11739 - 11920
Alignment:
Q  34 gattctcctcacttggctcttctcctagctttctcttggtttt-ctcccaaaaactgtttgtacgtgaaactgcctctgacttttattttctaattttct 132  Q
    |||||||| | |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| ||| ||  |         |||||||    
T  11739 gattctcccctcttggctcttctcctagctttctcttggtttttctcccaaaaactgtttgtacgtgaaattgcttctaaccct---------attttct 11829  T
Q  133 caataaatataacctcccaatatttaattaactcccacttaattcactaaattctcatttaaccccaaaactccaattaaatcctaattct 223  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||    
T  11830 caataaatataacctcccaatatttaattaactcccacttaattcacttaattctcatttaaccccaaaactccaattaagtcctaattct 11920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 115; Significance: 2e-58; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 4 - 223
Target Start/End: Complemental strand, 25520 - 25301
Alignment:
Q  4 gattgaagaacaaaactctacagaaaatctgattctcctcacttggctcttctcctagctttctcttggtttt-ctcccaaaaa-ctgtttgtacgtgaa 101  Q
    |||||| ||||||||||||||||||  ||||||||| | ||||||||||||||| |||||||||||||||||| |||||||||  ||||| |||||||||    
T  25520 gattgatgaacaaaactctacagaa--tctgattcttcccacttggctcttctcttagctttctcttggtttttctcccaaaactctgttggtacgtgaa 25423  T
Q  102 actgcctctgacttttattttctaattttctcaataaatataacctcccaatatttaattaactcccacttaattcactaaattctcatttaaccccaaa 201  Q
    ||||| ||||| | |||  |||||||||||||| |||| ||||||||||||||| |||||||||||||||||||||||| |||||| | |||||||||||    
T  25422 actgcttctgattcttaggttctaattttctcagtaaacataacctcccaatatctaattaactcccacttaattcacttaattcttaattaaccccaaa 25323  T
Q  202 actccaattaaatcctaattct 223  Q
    |||| || ||||| ||||||||    
T  25322 actctaaataaattctaattct 25301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 115; Significance: 2e-58; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 11 - 223
Target Start/End: Complemental strand, 35431 - 35219
Alignment:
Q  11 gaacaaaactctacagaaaatctgattctcctcacttggctcttctcctagctttctcttggtttt-ctcccaaaaactgtttgtacgtgaaactgcctc 109  Q
    ||||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||  ||    
T  35431 gaacaaagctctaca-aaaatctgattctcctcccttggctcttctcctagctttctcttggtttttctcccaaaagctgtttgtacgtgaaactggttc 35333  T
Q  110 tgacttttattttctaatttt-ctcaataaatataacctcccaatatttaattaactcccacttaattcactaaattctcatttaaccccaaaactccaa 208  Q
    | ||  | |||||||  |||| |||| ||| ||||| || |||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||    
T  35332 taaccct-attttctcctttttctcagtaagtataatcttccaatatttaattaatgcccacttaattcacttaattctcatttaaccccaaaactccaa 35234  T
Q  209 ttaaatcctaattct 223  Q
    |||||||||||||||    
T  35233 ttaaatcctaattct 35219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 223
Target Start/End: Complemental strand, 15822 - 15760
Alignment:
Q  160 ttaactcccacttaattcactaaattctcatttaaccccaaaactccaattaaatcctaattct 223  Q
    ||||||||| ||||||||  | ||||||||||||||| ||||||| ||||||||||||||||||    
T  15822 ttaactccc-cttaattctattaattctcatttaacctcaaaacttcaattaaatcctaattct 15760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 114; Significance: 6e-58; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 1840 - 2055
Alignment:
Q  1 tttgattgaagaacaaaactctacagaaaatctgattctcctcacttggctcttctcctagctttctcttgg-ttttct-cccaaaaactgtttgtacgt 98  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||    
T  1840 tttgattgaagaaaaaaactctacagaaaatctgagtctcctcacttggctcttctcctagctttctcttggtttttctccccaaaaactgtttgtacgt 1939  T
Q  99 gaaactgcctctgacttttattttct-aattttctcaataaatataacctcccaatatttaattaactcccacttaattcactaaattctcatttaaccc 197  Q
    |||||||| ||| ||   ||||| ||   |||||||| ||||||||| || ||||||||||||||||||||||||         ||||||||||||||||    
T  1940 gaaactgcttctaac-cctatttcctcctttttctcagtaaatataatcttccaatatttaattaactcccactt---------aattctcatttaaccc 2029  T
Q  198 caaaactccaattaaatcctaattct 223  Q
    ||||||||||||||||||||||||||    
T  2030 caaaactccaattaaatcctaattct 2055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 111; Significance: 4e-56; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 64 - 223
Target Start/End: Original strand, 10194 - 10355
Alignment:
Q  64 ttctcttggtttt-ctcccaaaaa-ctgtttgtacgtgaaa-ctgcctctgacttttattttctaattttctcaataaatataacctcccaatatttaat 160  Q
    ||||||||||||| |||||||||  ||||| |||||||||| |||| |||||||| ||||||||||||||||||||||||||||| ||||||||||||||    
T  10194 ttctcttggtttttctcccaaaactctgtt-gtacgtgaaaactgcttctgacttctattttctaattttctcaataaatataacttcccaatatttaat 10292  T
Q  161 taactcccacttaattcactaaattctcatttaaccccaaaactccaattaaatcctaattct 223  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  10293 taactcccacttaattcacttaattctcatttaaccccaaaactccaattaaatcctaattct 10355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 111; Significance: 4e-56; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 11 - 223
Target Start/End: Complemental strand, 178473 - 178261
Alignment:
Q  11 gaacaaaactctacagaaaatctgattctcctcacttggctcttctcctagctttctcttgg-ttttctcccaaaaactgtttgtacgtgaaactgcctc 109  Q
    ||||||| ||||||| |||||| |||||||| | |||||||||||||||||||||||||||| ||||||||||||||||||||  |||||||||||  ||    
T  178473 gaacaaagctctaca-aaaatcagattctcccctcttggctcttctcctagctttctcttggtttttctcccaaaaactgttttcacgtgaaactgtttc 178375  T
Q  110 tgacttttattttct-aattttctcaataaatataacctcccaatatttaattaactcccacttaattcactaaattctcatttaaccccaaaactccaa 208  Q
    | ||  |||||||||   |||||||| ||||||||| || |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||    
T  178374 taac-cttattttctcctttttctcagtaaatataatcttccaatatttaattaactcccacttaatttacttaattctcatttaaccccaaaactccaa 178276  T
Q  209 ttaaatcctaattct 223  Q
    |||||| ||||||||    
T  178275 ttaaattctaattct 178261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 100 - 223
Target Start/End: Complemental strand, 52337869 - 52337746
Alignment:
Q  100 aaactgcctctgacttttattttctaattttctcaataaatataacctcccaatatttaattaactcccacttaattcactaaattctcatttaacccca 199  Q
    ||||||| |||||||| |||||||||||||| |||||||||||||| |||||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  52337869 aaactgcttctgacttctattttctaattttttcaataaatataacttcccaatatttaattaactcccacgtaattcacttaattctcatttaacccca 52337770  T
Q  200 aaactccaattaaatcctaattct 223  Q
    ||||||||||||||||||||||||    
T  52337769 aaactccaattaaatcctaattct 52337746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 4 - 177
Target Start/End: Complemental strand, 52212431 - 52212258
Alignment:
Q  4 gattgaagaacaaaactctacagaaaatctgattctcctcacttggctcttctcctagctttctcttggtttt-ctcccaaaaactgtttgtacgtgaaa 102  Q
    |||||| ||||||| |||||||  |||||||||||||| |||||| |||||||| |||||||||||||||||| ||||||||  || |||||||||||||    
T  52212431 gattgatgaacaaagctctaca--aaatctgattctccccacttgactcttctcttagctttctcttggtttttctcccaaactctatttgtacgtgaaa 52212334  T
Q  103 ctgcctctgacttttattttctaatttt-ctcaataaatataacctcccaatatttaattaactcccacttaattc 177  Q
     ||| ||||||| |||  |||||||||| |||| |||| ||||||||||||||| |||||||||||||||||||||    
T  52212333 gtgcttctgactcttaggttctaatttttctcagtaaacataacctcccaatatctaattaactcccacttaattc 52212258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 100 - 223
Target Start/End: Original strand, 13837276 - 13837399
Alignment:
Q  100 aaactgcctctgacttttattttctaattttctcaataaatataacctcccaatatttaattaactcccacttaattcactaaattctcatttaacccca 199  Q
    ||||||| ||| |||| |||||||||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||| |||| | |||||||||||    
T  13837276 aaactgcttctaacttctattttctaattttctcagtaaatataacttcccaatatctaattaactcccacttaattcacttaattattatttaacccca 13837375  T
Q  200 aaactccaattaaatcctaattct 223  Q
    ||||||||| ||||| ||||||||    
T  13837376 aaactccaaataaattctaattct 13837399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 73 - 223
Target Start/End: Complemental strand, 30205554 - 30205403
Alignment:
Q  73 ttttctcccaaaaactgtttgtacgtgaaa-ctgcctctgacttttatttt-ctaattttctcaataaatataacctcccaatatttaattaactcccac 170  Q
    |||||||||||||  |  |||||||||||| |||| | |||||| |||||| |||||||||||||||| |||||| ||||||||||||||||| ||||||    
T  30205554 ttttctcccaaaacttagttgtacgtgaaaactgcttttgacttctatttttctaattttctcaataa-tataacttcccaatatttaattaattcccac 30205456  T
Q  171 ttaattcactaaattctcatttaaccccaaaactccaattaaatcctaattct 223  Q
     ||||||||| ||||||| |||||| |||||||||||||||||||||||||||    
T  30205455 ctaattcacttaattctcgtttaacaccaaaactccaattaaatcctaattct 30205403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 102
Target Start/End: Complemental strand, 13025569 - 13025472
Alignment:
Q  5 attgaagaacaaaactctacagaaaatctgattctcctcacttggctcttctcctagctttctcttg-gttttctcccaaaaactgtttgtacgtgaaa 102  Q
    ||||| ||||||| ||||||| |||||| |||||||| | |||||||||||||||||||||||||||  |||||||||||||||||||| |||||||||    
T  13025569 attgatgaacaaagctctaca-aaaatcagattctcccctcttggctcttctcctagctttctcttgatttttctcccaaaaactgtttttacgtgaaa 13025472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 85
Target Start/End: Complemental strand, 55291602 - 55291523
Alignment:
Q  5 attgaagaacaaaactctacagaaaatctgattctcctcacttggctcttctcctagctttctcttggttttctcccaaaa 85  Q
    ||||| ||||||| ||||||| |||||| |||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  55291602 attgatgaacaaatctctaca-aaaatcagattctcccctcttggctcttctcctagctttctcttggttttctcccaaaa 55291523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 102
Target Start/End: Complemental strand, 13029161 - 13029064
Alignment:
Q  5 attgaagaacaaaactctacagaaaatctgattctcctcacttggctcttctcctagctttctcttg-gttttctcccaaaaactgtttgtacgtgaaa 102  Q
    ||||| ||||||  ||||||| |||||| |||||||| | |||||||||||||||||||||||||||  |||||||||||||||||||| |||||||||    
T  13029161 attgatgaacaacgctctaca-aaaatcagattctcccctcttggctcttctcctagctttctcttgatttttctcccaaaaactgtttttacgtgaaa 13029064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 4 - 76
Target Start/End: Complemental strand, 23392819 - 23392748
Alignment:
Q  4 gattgaagaacaaaactctacagaaaatctgattctcctcacttggctcttctcctagctttctcttggtttt 76  Q
    |||||| ||| ||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  23392819 gattgatgaataaaactctaccaaaaatctgattctcc-cacttggctcttctcctagctttctcttggtttt 23392748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 5 - 102
Target Start/End: Original strand, 10551376 - 10551474
Alignment:
Q  5 attgaagaacaaaactctacagaaaatctgattctcctcacttggctcttctcc-tagctttctcttggtttt-ctcccaaaaactgtttgtacgtgaaa 102  Q
    ||||| ||||||| ||||||| |||||| |||||||| | |||||||||||||| |||||||||||||||||| |||||||||||| ||| |||||||||    
T  10551376 attgatgaacaaagctctaca-aaaatcagattctcccctcttggctcttctccctagctttctcttggtttttctcccaaaaactatttttacgtgaaa 10551474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 29 - 131
Target Start/End: Complemental strand, 10952706 - 10952603
Alignment:
Q  29 aatctgattctcctcacttggctcttctcctagctttctcttggttttctcccaaaaactg--tttgtacgtgaaactgcctctgacttttattttctaa 126  Q
    |||| |||||||| |  ||||||||||||||||||||||||| |||||||||||||| |||  ||||||||||||||||  ||||||| | | ||||||     
T  10952706 aatcagattctccccctttggctcttctcctagctttctctt-gttttctcccaaaacctgtatttgtacgtgaaactggttctgactctcagtttctat 10952608  T
Q  127 ttttc 131  Q
    |||||    
T  10952607 ttttc 10952603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 29 - 114
Target Start/End: Complemental strand, 10953635 - 10953549
Alignment:
Q  29 aatctgattctcctcacttggctcttctcctagctttctcttggttttctcccaaaaac--tgtttgtacgtgaaactgcctctgact 114  Q
    |||| |||||||| |  ||||||||||||||||||||||||| |||||||||||||| |  ||||||||||||||||||  |||||||    
T  10953635 aatcagattctccccctttggctcttctcctagctttctctt-gttttctcccaaaacctgtgtttgtacgtgaaactggttctgact 10953549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 112 - 223
Target Start/End: Complemental strand, 2037603 - 2037493
Alignment:
Q  112 acttttattttctaattttctcaataaatataacctcccaatatttaattaactcccacttaattcactaaattctcatttaaccccaaaactccaatta 211  Q
    |||| |||||||||||| | | ||||||||||| ||||||||||| | || |||||| || | || ||| ||||||| | ||||||| ||||||||||||    
T  2037603 acttctattttctaattcttt-aataaatataatctcccaatattcactttactccccctaagtttacttaattctcgtataacccccaaactccaatta 2037505  T
Q  212 aatcctaattct 223  Q
    ||||||| ||||    
T  2037504 aatcctatttct 2037493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 112 - 223
Target Start/End: Complemental strand, 2041344 - 2041234
Alignment:
Q  112 acttttattttctaattttctcaataaatataacctcccaatatttaattaactcccacttaattcactaaattctcatttaaccccaaaactccaatta 211  Q
    |||| |||||||||||| | | ||||||||||| ||||||||||| | || |||||| || | || ||| ||||||| | ||||||| ||||||||||||    
T  2041344 acttctattttctaattcttt-aataaatataatctcccaatattcactttactccccctaagtttacttaattctcgtataacccccaaactccaatta 2041246  T
Q  212 aatcctaattct 223  Q
    ||||||| ||||    
T  2041245 aatcctatttct 2041234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 112 - 223
Target Start/End: Original strand, 14039184 - 14039294
Alignment:
Q  112 acttttattttctaattttctcaataaatataacctcccaatatttaattaactcccacttaattcactaaattctcatttaaccccaaaactccaatta 211  Q
    |||| |||||||||||| | | ||||||||||| ||||||||||| | || |||||| || | || ||| ||||||| | ||||||| ||||||||||||    
T  14039184 acttctattttctaattcttt-aataaatataatctcccaatattcactttactccccctaagtttacttaattctcgtataacccccaaactccaatta 14039282  T
Q  212 aatcctaattct 223  Q
    ||||||| ||||    
T  14039283 aatcctatttct 14039294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 112 - 223
Target Start/End: Original strand, 14042652 - 14042762
Alignment:
Q  112 acttttattttctaattttctcaataaatataacctcccaatatttaattaactcccacttaattcactaaattctcatttaaccccaaaactccaatta 211  Q
    |||| |||||||||||| | | ||||||||||| ||||||||||| | || |||||| || | || ||| ||||||| | ||||||| ||||||||||||    
T  14042652 acttctattttctaattcttt-aataaatataatctcccaatattcactttactccccctaagtttacttaattctcgtataacccccaaactccaatta 14042750  T
Q  212 aatcctaattct 223  Q
    ||||||| ||||    
T  14042751 aatcctatttct 14042762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 46 - 114
Target Start/End: Original strand, 18898068 - 18898137
Alignment:
Q  46 ttggctcttctcctagctttctcttggttttctcccaaaa--actgtttgtacgtgaaactgcctctgact 114  Q
    ||||||||||||||||||||||||| ||||||||||||||   |||||||||||||||||||  |||||||    
T  18898068 ttggctcttctcctagctttctctt-gttttctcccaaaacctctgtttgtacgtgaaactgtttctgact 18898137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 112 - 223
Target Start/End: Original strand, 39231731 - 39231841
Alignment:
Q  112 acttttattttctaattttctcaataaatataacctcccaatatttaattaactcccacttaattcactaaattctcatttaaccccaaaactccaatta 211  Q
    |||| |||||||||||| | | ||||||||||| ||||||||||| | || |||||| || | || ||| ||||||| | ||||||| ||||||||||||    
T  39231731 acttctattttctaattcttt-aataaatataatctcccaatattcactttactccccctaagtttacttaattctcgtataacccccaaactccaatta 39231829  T
Q  212 aatcctaattct 223  Q
    ||||||| ||||    
T  39231830 aatcctatttct 39231841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 112 - 223
Target Start/End: Original strand, 54974390 - 54974500
Alignment:
Q  112 acttttattttctaattttctcaataaatataacctcccaatatttaattaactcccacttaattcactaaattctcatttaaccccaaaactccaatta 211  Q
    |||| |||||||||||| | | ||||||||||| ||||||||||| | || |||||| || | || ||| ||||||| | ||||||| ||||||||||||    
T  54974390 acttctattttctaattcttt-aataaatataatctcccaatattcactttactccccctaagtttacttaattctcgtataacccccaaactccaatta 54974488  T
Q  212 aatcctaattct 223  Q
    ||||||| ||||    
T  54974489 aatcctatttct 54974500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 112 - 223
Target Start/End: Original strand, 54977000 - 54977110
Alignment:
Q  112 acttttattttctaattttctcaataaatataacctcccaatatttaattaactcccacttaattcactaaattctcatttaaccccaaaactccaatta 211  Q
    |||| |||||||||||| | | ||||||||||| ||||||||||| | || |||||| || | || ||| ||||||| | ||||||| ||||||||||||    
T  54977000 acttctattttctaattcttt-aataaatataatctcccaatattcactttactccccctaagtttacttaattctcgtataacccccaaactccaatta 54977098  T
Q  212 aatcctaattct 223  Q
    ||||||| ||||    
T  54977099 aatcctatttct 54977110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 112 - 223
Target Start/End: Original strand, 54979610 - 54979720
Alignment:
Q  112 acttttattttctaattttctcaataaatataacctcccaatatttaattaactcccacttaattcactaaattctcatttaaccccaaaactccaatta 211  Q
    |||| |||||||||||| | | ||||||||||| ||||||||||| | || |||||| || | || ||| ||||||| | ||||||| ||||||||||||    
T  54979610 acttctattttctaattcttt-aataaatataatctcccaatattcactttactccccctaagtttacttaattctcgtataacccccaaactccaatta 54979708  T
Q  212 aatcctaattct 223  Q
    ||||||| ||||    
T  54979709 aatcctatttct 54979720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 102
Target Start/End: Complemental strand, 17547470 - 17547373
Alignment:
Q  5 attgaagaacaaaactctacagaaaatctgattctcctcacttggctcttctcctagctttctcttg-gttttctcccaaaaactgtttgtacgtgaaa 102  Q
    ||||| ||||||| ||||||| |||||| |||||||| | ||||||||||||||||||||| |||||  ||||||| |||| | ||||| |||||||||    
T  17547470 attgatgaacaaagctctaca-aaaatcagattctcccctcttggctcttctcctagctttttcttgttttttctctcaaatattgtttttacgtgaaa 17547373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 131
Target Start/End: Complemental strand, 10833284 - 10833179
Alignment:
Q  29 aatctgattctcctcacttggctcttctcctagctttctcttggttttctcccaaaa----actgtttgtacgtgaaactgcctctgacttttattttct 124  Q
    |||| |||||||| |  ||||||||||||||||||||||||| ||||||||||||||     |||||||||||||||||||  ||||||| | | |||||    
T  10833284 aatcagattctccccctttggctcttctcctagctttctctt-gttttctcccaaaacctctctgtttgtacgtgaaactggttctgactctcagtttct 10833186  T
Q  125 aattttc 131  Q
    | |||||    
T  10833185 atttttc 10833179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 46 - 104
Target Start/End: Original strand, 18893775 - 18893834
Alignment:
Q  46 ttggctcttctcctagctttctcttggttttctcccaaaa--actgtttgtacgtgaaact 104  Q
    ||||||||||||||||||||||||| ||||||||||||||   ||||||||||||||||||    
T  18893775 ttggctcttctcctagctttctctt-gttttctcccaaaacctctgtttgtacgtgaaact 18893834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 215
Target Start/End: Complemental strand, 2034095 - 2033993
Alignment:
Q  112 acttttattttctaattttctcaataaatataacctcccaatatttaattaactcccacttaattcactaaattctcatttaaccccaaaactccaatta 211  Q
    |||| |||||||||||| | | ||||||||||| ||||||||||| | || |||||| || | || ||| ||||||| | ||||||| ||||||||||||    
T  2034095 acttctattttctaattcttt-aataaatataatctcccaatattcactttactccccctaagtttacttaattctcgtataacccccaaactccaatta 2033997  T
Q  212 aatc 215  Q
    ||||    
T  2033996 aatc 2033993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 100 - 201
Target Start/End: Complemental strand, 10988736 - 10988638
Alignment:
Q  100 aaactgcctctgacttttattttctaattttctcaataaatataacctcccaatatttaattaactcccacttaattcactaaattctcatttaacccca 199  Q
    ||||||| |||||||| |||||||||||| | | ||||||||||||||||||||| ||  |||||| || ||||||||  | |||||| |||||||||||    
T  10988736 aaactgcttctgacttctattttctaattcttt-aataaatataacctcccaata-ttccttaact-cctcttaattctattaattctaatttaacccca 10988640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 13837191 - 13837242
Alignment:
Q  4 gattgaagaacaaaactctacagaaaatctgattctcctcacttggctcttctc 57  Q
    |||||| ||||||||||||||||  |||| |||||||| |||||||||||||||    
T  13837191 gattgatgaacaaaactctacag--aatcagattctccccacttggctcttctc 13837242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 223
Target Start/End: Complemental strand, 15009253 - 15009163
Alignment:
Q  135 ataaatataacctcccaa-tatttaattaactcccacttaattcactaaattctcatttaacccc-aaaactccaattaaatcctaattct 223  Q
    |||||||||| ||||||| |||| | |||| ||||| | |||| ||| ||||||||| ||||||| |||||||||||||||| ||| ||||    
T  15009253 ataaatataatctcccaaatattcacttaattcccattaaatttacttaattctcatataacccccaaaactccaattaaattctatttct 15009163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 223
Target Start/End: Complemental strand, 602753 - 602644
Alignment:
Q  116 ttattttctaattttctcaataaatataacctccc-aatatttaattaactcccacttaattcactaaattctcatttaacccc-aaaactccaattaaa 213  Q
    ||||||||||||| | |  |||||||||| ||||| |||||| | |||| ||||| | |||| ||| |||| |||| ||||||| |||||||||||||||    
T  602753 ttattttctaattctttttataaatataatctccccaatattcacttaattcccattaaatttacttaattttcatataacccctaaaactccaattaaa 602654  T
Q  214 tcctaattct 223  Q
    | ||| ||||    
T  602653 ttctatttct 602644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 53
Target Start/End: Original strand, 13054945 - 13054990
Alignment:
Q  8 gaagaacaaaactctacagaaaatctgattctcctcacttggctct 53  Q
    |||| ||| |||||||||||||||||| ||||| ||||||||||||    
T  13054945 gaaggacagaactctacagaaaatctggttctcttcacttggctct 13054990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 214
Target Start/End: Original strand, 7633372 - 7633472
Alignment:
Q  116 ttattttctaattttctcaataaatataacctccc-aatatttaattaactcccacttaattcactaaattctcatttaacccc-aaaactccaattaaa 213  Q
    ||||||||||||| | |  |||||| ||| ||||| |||||| | |||| ||||| | |||| ||| ||||||||| ||||||| |||||||||||||||    
T  7633372 ttattttctaattctttttataaatgtaatctccccaatattcacttaattcccattaaatttacttaattctcatataacccccaaaactccaattaaa 7633471  T
Q  214 t 214  Q
    |    
T  7633472 t 7633472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 223
Target Start/End: Original strand, 54042662 - 54042738
Alignment:
Q  148 cccaatatttaattaactcccacttaattcactaaattctcatttaacccc-aaaactccaattaaatcctaattct 223  Q
    ||||||||| | |||| ||||| | |||| ||| ||||||||| ||||||| |||||||||||||||| ||| ||||    
T  54042662 cccaatattcacttaattcccattaaatttacttaattctcatataacccccaaaactccaattaaattctatttct 54042738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 107; Significance: 9e-54; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 64 - 223
Target Start/End: Complemental strand, 3629 - 3468
Alignment:
Q  64 ttctcttggtttt-ctcccaaaaa-ctgtttgtacgtgaaa-ctgcctctgacttttattttctaattttctcaataaatataacctcccaatatttaat 160  Q
    ||||||||||||| |||||||||  ||||| |||||||||| |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  3629 ttctcttggtttttctcccaaaactctgtt-gtacgtgaaaactgcttctgacttctattttctaattttctcaataaatataacctcccaatatttaat 3531  T
Q  161 taactcccacttaattcactaaattctcatttaaccccaaaactccaattaaatcctaattct 223  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||||||| |||||||    
T  3530 taactcccacttaattcacttaattctcatttaacctcaaaactccaattaaatcataattct 3468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 64 - 223
Target Start/End: Complemental strand, 11589 - 11428
Alignment:
Q  64 ttctcttggtttt-ctcccaaaaa-ctgtttgtacgtgaaa-ctgcctctgacttttattttctaattttctcaataaatataacctcccaatatttaat 160  Q
    ||||||||||||| |||||||||  ||||| |||||||||| |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  11589 ttctcttggtttttctcccaaaactctgtt-gtacgtgaaaactgcttctgacttctattttctaattttctcaataaatataacctcccaatatttaat 11491  T
Q  161 taactcccacttaattcactaaattctcatttaaccccaaaactccaattaaatcctaattct 223  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||||||| |||||||    
T  11490 taactcccacttaattcacttaattctcatttaacctcaaaactccaattaaatcataattct 11428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 107; Significance: 9e-54; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 64 - 223
Target Start/End: Complemental strand, 33881 - 33720
Alignment:
Q  64 ttctcttggtttt-ctcccaaaaa-ctgtttgtacgtgaaa-ctgcctctgacttttattttctaattttctcaataaatataacctcccaatatttaat 160  Q
    ||||||||||||| |||||||||  ||||| |||||||||| |||| |||||||| ||||||||||||||||||||||||||||| ||||||||||||||    
T  33881 ttctcttggtttttctcccaaaactctgtt-gtacgtgaaaactgcttctgacttctattttctaattttctcaataaatataacttcccaatatttaat 33783  T
Q  161 taactcccacttaattcactaaattctcatttaaccccaaaactccaattaaatcctaattct 223  Q
    |||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  33782 taactcccacttaattcacttaattctcatttaaccctaaaactccaattaaatcctaattct 33720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 106; Significance: 4e-53; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 91 - 223
Target Start/End: Original strand, 4016 - 4149
Alignment:
Q  91 ttgtacgtgaaa-ctgcctctgacttttattttctaattttctcaataaatataacctcccaatatttaattaactcccacttaattcactaaattctca 189  Q
    |||||||||||| |||| |||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| ||||||||    
T  4016 ttgtacgtgaaaactgcttctgacttctattttctaattttctcaataaatataacttcccaatatttaattaactcccacgtaattcacttaattctca 4115  T
Q  190 tttaaccccaaaactccaattaaatcctaattct 223  Q
    ||||||||||||||||||||||||||||||||||    
T  4116 tttaaccccaaaactccaattaaatcctaattct 4149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 103; Significance: 2e-51; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 91 - 220
Target Start/End: Complemental strand, 23640 - 23510
Alignment:
Q  91 ttgtacgtgaaa-ctgcctctgacttttattttctaattttctcaataaatataacctcccaatatttaattaactcccacttaattcactaaattctca 189  Q
    |||||||||||| |||| |||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| |||    
T  23640 ttgtacgtgaaaactgcttctgacttctattttctaattttctcaataaatataacttcccaatatttaattaactcccacttaattcacttaattttca 23541  T
Q  190 tttaaccccaaaactccaattaaatcctaat 220  Q
    |||||||||||||||||||||||||||||||    
T  23540 tttaaccccaaaactccaattaaatcctaat 23510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0500 (Bit Score: 102; Significance: 9e-51; HSPs: 1)
Name: scaffold0500
Description:

Target: scaffold0500; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 91 - 223
Target Start/End: Complemental strand, 10638 - 10505
Alignment:
Q  91 ttgtacgtgaaa-ctgcctctgacttttattttctaattttctcaataaatataacctcccaatatttaattaactcccacttaattcactaaattctca 189  Q
    |||||||||||| |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| |||    
T  10638 ttgtacgtgaaaactgcttctgacttctattttctaattttctcaataaatataacctcccaatatttaattaactcccacttaattcacctaattatca 10539  T
Q  190 tttaaccccaaaactccaattaaatcctaattct 223  Q
     |||||||||||||||||||||||||||||||||    
T  10538 attaaccccaaaactccaattaaatcctaattct 10505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0860 (Bit Score: 94; Significance: 5e-46; HSPs: 1)
Name: scaffold0860
Description:

Target: scaffold0860; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 91 - 223
Target Start/End: Original strand, 3892 - 4025
Alignment:
Q  91 ttgtacgtgaaa-ctgcctctgacttttattttctaattttctcaataaatataacctcccaatatttaattaactcccacttaattcactaaattctca 189  Q
    |||||||||||| |||| |||||||| |||||||||||||||| |||||||||||| |||||||||||||||||||||||| ||||||||| ||||||||    
T  3892 ttgtacgtgaaaactgcttctgacttctattttctaattttctaaataaatataacttcccaatatttaattaactcccacctaattcacttaattctca 3991  T
Q  190 tttaaccccaaaactccaattaaatcctaattct 223  Q
    |||||||||||||||| |||||||||| ||||||    
T  3992 tttaaccccaaaactctaattaaatccaaattct 4025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609 (Bit Score: 94; Significance: 5e-46; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 91 - 223
Target Start/End: Original strand, 763 - 896
Alignment:
Q  91 ttgtacgtgaaa-ctgcctctgacttttattttctaattttctcaataaatataacctcccaatatttaattaactcccacttaattcactaaattctca 189  Q
    |||||||||||| |||| |||||||| ||||||||||||||| ||||||||||||| |||||||||||||| ||||||||| ||||||||| ||||||||    
T  763 ttgtacgtgaaaactgcttctgacttctattttctaattttcgcaataaatataacttcccaatatttaatgaactcccacctaattcacttaattctca 862  T
Q  190 tttaaccccaaaactccaattaaatcctaattct 223  Q
    |||||||||||||||| |||||||||||||||||    
T  863 tttaaccccaaaactctaattaaatcctaattct 896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 69037 - 69138
Alignment:
Q  1 tttgattgaagaacaaaactctacagaaaatctgattctcctcacttggctcttctcctagctttctcttggttttctcccaaaaactgtttgtacgtga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  69037 tttgattgaagaacaaaactctacagaaaatctgattctcctcacttggctcttctcctagctttctcttggttttctccc-aaaactgattgtacgtga 69135  T
Q  101 aac 103  Q
    |||    
T  69136 aac 69138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 34 - 189
Target Start/End: Original strand, 52081 - 52237
Alignment:
Q  34 gattctcctcacttggctcttctcctagctttctcttgg-ttttctcccaaaaactgtttgtacgtgaaactgcctctgacttttattttct-aattttc 131  Q
    |||||||| | |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| ||   ||||||||   |||||    
T  52081 gattctcccctcttggctcttctcctagctttctcttggtttttctcccaaaaactgtttgtacgtgaaactgcatctaac-cctattttctcctttttc 52179  T
Q  132 tcaataaatataacctcccaatatttaattaactcccacttaattcactaaattctca 189  Q
    ||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  52180 tcagtaaatataatctcccaatatttaattaactcccacttaattcacttaattctca 52237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0216 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 31 - 223
Target Start/End: Original strand, 22391 - 22575
Alignment:
Q  31 tctgattctcctcacttggctcttctcctagctttctcttgg-ttttctcccaaaaactgtttgtacgtgaaactgcctctgacttttattttctaatt- 128  Q
    ||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||||||||||||| ||| ||   | ||||||  ||     
T  22391 tctgattctcctcacttggctgttctcctaactttctcttggtttttctcccaaaaagtgtttgtacgtgaaactgcttctaac-cctcttttctcctta 22489  T
Q  129 ttctcaataaatataacctcccaatatttaattaactcccacttaattcactaaattctcatttaaccccaaaactccaattaaatcctaattct 223  Q
    |||||| ||||||||| || ||||||||||||||||||||||||         |||||||||||||||||||| |||||||||||||||||||||    
T  22490 ttctcagtaaatataatcttccaatatttaattaactcccactt---------aattctcatttaaccccaaagctccaattaaatcctaattct 22575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0331 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 16 - 113
Target Start/End: Original strand, 4771 - 4869
Alignment:
Q  16 aaactctacagaaaatctgattctcctcacttggctcttctcctagctttctcttgg-ttttctcccaaaaactgtttgtacgtgaaactgcctctgac 113  Q
    |||||||||  |||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||    
T  4771 aaactctaccaaaaatctgattctcttcacttggctcttctcctagctttctcttggtttttctcccaaaaactatttgtacgtgaaactgcttctgac 4869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1276 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold1276
Description:

Target: scaffold1276; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 142 - 223
Target Start/End: Original strand, 1279 - 1360
Alignment:
Q  142 taacctcccaatatttaattaactcccacttaattcactaaattctcatttaaccccaaaactccaattaaatcctaattct 223  Q
    ||||||| |||||| ||||||||||||| |||||||||| ||||||||||||||||||||||||||| |||||  |||||||    
T  1279 taacctctcaatatctaattaactcccagttaattcacttaattctcatttaaccccaaaactccaaataaattttaattct 1360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1276; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 27 - 85
Target Start/End: Original strand, 1212 - 1271
Alignment:
Q  27 aaaatctgattctcctcacttggctcttctcctagctttctcttgg-ttttctcccaaaa 85  Q
    ||||||||||||||| ||||||||||||||  |||||||||||||| |||||||||||||    
T  1212 aaaatctgattctccccacttggctcttctgttagctttctcttggtttttctcccaaaa 1271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 4 - 106
Target Start/End: Original strand, 2170 - 2272
Alignment:
Q  4 gattgaagaacaaaactctacagaaaatctgattctcctcacttggctcttctcctagctttctcttgg-ttttctcccaaaa-actgtttgtacgtgaa 101  Q
    |||||| ||||||| ||||||||||  ||||||||| | ||||||||||||||| |||||||||||||| |||||||||||||  |||||||||||||||    
T  2170 gattgatgaacaaagctctacagaa--tctgattcttcccacttggctcttctcttagctttctcttggtttttctcccaaaactctgtttgtacgtgaa 2267  T
Q  102 actgc 106  Q
    |||||    
T  2268 actgc 2272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 50; Significance: 9e-20; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 29 - 131
Target Start/End: Original strand, 147698 - 147801
Alignment:
Q  29 aatctgattctcctcacttggctcttctcctagctttctcttggttttctcccaaaaact--gtttgtacgtgaaactgcctctgacttttattttctaa 126  Q
    |||| |||||||| |  |||||||||||||||||||||||||| ||||||||||||| ||  ||||||||||||||||| |||||||| ||| ||||||     
T  147698 aatcagattctccccctttggctcttctcctagctttctcttg-ttttctcccaaaacctctgtttgtacgtgaaactggctctgactcttagtttctat 147796  T
Q  127 ttttc 131  Q
    |||||    
T  147797 ttttc 147801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 112 - 223
Target Start/End: Complemental strand, 133084 - 132974
Alignment:
Q  112 acttttattttctaattttctcaataaatataacctcccaatatttaattaactcccacttaattcactaaattctcatttaaccccaaaactccaatta 211  Q
    |||| |||||||||||| | | ||||||||||| ||||||||||| | || |||||| || | || ||| ||||||| | ||||||| ||||||||||||    
T  133084 acttctattttctaattcttt-aataaatataatctcccaatattcactttactccctctaagtttacttaattctcgtataacccccaaactccaatta 132986  T
Q  212 aatcctaattct 223  Q
    ||||||| ||||    
T  132985 aatcctatttct 132974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 155 - 209
Target Start/End: Original strand, 8713 - 8767
Alignment:
Q  155 tttaattaactcccacttaattcactaaattctcatttaaccccaaaactccaat 209  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  8713 tttatttaactcccacttaattcacttaattctcatttaaccccaaaactccaat 8767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 134 - 215
Target Start/End: Complemental strand, 7635 - 7555
Alignment:
Q  134 aataaatataacctcccaatatttaattaactcccacttaattcactaaattctcatttaaccccaaaactccaattaaatc 215  Q
    ||||||||||| ||||||||| | | |||||||||||| |||| ||| ||||||||| ||||||||||||||||||||||||    
T  7635 aataaatataatctcccaatact-acttaactcccactaaatttacttaattctcatataaccccaaaactccaattaaatc 7555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 91 - 223
Target Start/End: Original strand, 47627 - 47758
Alignment:
Q  91 ttgtacgtgaaa-ctgcctctgacttttattttctaattttctcaataaatataacctcccaatatttaattaactcccacttaattcactaaattctca 189  Q
    |||||||||||| |||||||   ||| |||||||||  ||||| ||||||||||||||| ||||||| | || |||||| || | || ||| ||||||||    
T  47627 ttgtacgtgaaaactgcctcccccttctattttcta--tttcttaataaatataacctctcaatattcactttactccccctaagtttacttaattctca 47724  T
Q  190 tttaaccccaaaactccaattaaatcctaattct 223  Q
       |||||||||||||||||||||||||| ||||    
T  47725 aaaaaccccaaaactccaattaaatcctatttct 47758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0525
Description:

Target: scaffold0525; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 134 - 223
Target Start/End: Complemental strand, 7498 - 7409
Alignment:
Q  134 aataaatataacctcccaatatttaattaactcccacttaattcactaaattctcatttaaccccaaaactccaattaaatcctaattct 223  Q
    ||||||||||| ||||||||||| | || |||||| || | || ||| ||||||| | ||||||| ||||||||||||||||||| ||||    
T  7498 aataaatataatctcccaatattcactttactccccctaagtttacttaattctcgtataacccccaaactccaattaaatcctatttct 7409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 102
Target Start/End: Original strand, 34085 - 34162
Alignment:
Q  27 aaaatctga-ttctcctcacttggctcttctcctagctttctcttgg-ttttctcccaaaaactgtttgtacgtgaaa 102  Q
    ||||||||| |||||| ||||||||||||||| | |||||||||||| ||||||||||||||||| ||  ||||||||    
T  34085 aaaatctgaattctccccacttggctcttctcttggctttctcttggtttttctcccaaaaactgcttccacgtgaaa 34162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 102
Target Start/End: Complemental strand, 80727 - 80650
Alignment:
Q  27 aaaatctga-ttctcctcacttggctcttctcctagctttctcttgg-ttttctcccaaaaactgtttgtacgtgaaa 102  Q
    ||||||||| |||||| ||||||||||||||| | |||||||||||| ||||||||||||||||| ||  ||||||||    
T  80727 aaaatctgaattctccccacttggctcttctcttggctttctcttggtttttctcccaaaaactgcttccacgtgaaa 80650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0562 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0562
Description:

Target: scaffold0562; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 206
Target Start/End: Complemental strand, 2725 - 2674
Alignment:
Q  155 tttaattaactcccacttaattcactaaattctcatttaaccccaaaactcc 206  Q
    |||||||||||||||||||||||  | |||||| ||||||||||||||||||    
T  2725 tttaattaactcccacttaattctattaattcttatttaaccccaaaactcc 2674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0298
Description:

Target: scaffold0298; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 223
Target Start/End: Original strand, 812 - 874
Alignment:
Q  160 ttaactcccacttaattcactaaattctcatttaaccccaaaactccaattaaatcctaattct 223  Q
    ||||||||| ||||||||  | ||||||||||||||| ||||||| ||||||||||||||||||    
T  812 ttaactccc-cttaattctattaattctcatttaaccacaaaactacaattaaatcctaattct 874  T

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Target: scaffold0010 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 91 - 223
Target Start/End: Original strand, 106439 - 106569
Alignment:
Q  91 ttgtacgtgaaactgcctctgacttttattttctaattttctcaataaatataacctcccaatatttaattaactcccacttaattc-actaaattctca 189  Q
    ||||||||||||||||||||   || |||||||||  ||||||||||||||||||||| ||||| ||  |||||| || |||||||| | |||||||  |    
T  106439 ttgtacgtgaaactgcctctcctttctattttcta--tttctcaataaatataacctctcaata-ttctttaact-cctcttaattctattaaattccaa 106534  T
Q  190 tttaaccccaaaac-tccaattaaatcctaattct 223  Q
    ||||||||| |||| || || ||||||||||||||    
T  106535 tttaacccccaaacttcaaaataaatcctaattct 106569  T

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Target: scaffold0485 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0485
Description:

Target: scaffold0485; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 85
Target Start/End: Original strand, 3799 - 3879
Alignment:
Q  4 gattgaagaacaaaactctacagaaaatctgattctcctcacttggctcttctcctagctttctcttggttttctcccaaaa 85  Q
    |||||||| ||| |||||||||||||||| | ||||| |||||||||||| ||| | | |||||||| | ||||||||||||    
T  3799 gattgaaggacagaactctacagaaaatccggttctcttcacttggctctcctcttggttttctctt-gctttctcccaaaa 3879  T

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Target: scaffold1765 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1765
Description:

Target: scaffold1765; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 85
Target Start/End: Original strand, 516 - 594
Alignment:
Q  5 attgaagaacaaaactctacagaaaatctgattctcctcacttggctcttctcctagctttctcttggttttctcccaaaa 85  Q
    ||||||||||||| ||||||  |||||| || ||||||| ||||||||||||||| | |||||||| | ||||||||||||    
T  516 attgaagaacaaagctctaccaaaaatcagaatctcctctcttggctcttctcct-ggtttctctt-gctttctcccaaaa 594  T

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Target: scaffold0447 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 115
Target Start/End: Original strand, 7949 - 8001
Alignment:
Q  64 ttctcttggtttt-ctcccaaaaactgtttgtacgtgaaactgcctctgactt 115  Q
    ||||||||||||| |||||||||  ||||||||||||||||||| ||||||||    
T  7949 ttctcttggtttttctcccaaaacttgtttgtacgtgaaactgcttctgactt 8001  T

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Target: scaffold0447; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 115
Target Start/End: Original strand, 12563 - 12615
Alignment:
Q  64 ttctcttggtttt-ctcccaaaaactgtttgtacgtgaaactgcctctgactt 115  Q
    ||||||||||||| |||||||||  ||||||||||||||||||| ||||||||    
T  12563 ttctcttggtttttctcccaaaacttgtttgtacgtgaaactgcttctgactt 12615  T

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Target: scaffold0383 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 115
Target Start/End: Original strand, 10558 - 10610
Alignment:
Q  64 ttctcttggtttt-ctcccaaaaactgtttgtacgtgaaactgcctctgactt 115  Q
    ||||||||||||| |||||||||  ||||||||||||||||||| ||||||||    
T  10558 ttctcttggtttttctcccaaaacttgtttgtacgtgaaactgcttctgactt 10610  T

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Target: scaffold0130 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 11603 - 11551
Alignment:
Q  5 attgaagaacaaaactctacagaaaatctgattctcctcacttggctcttctc 57  Q
    |||||||| |||| |||||| ||||||||| ||||| ||||||||||||||||    
T  11603 attgaagagcaaagctctacggaaaatctggttctcttcacttggctcttctc 11551  T

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Target: scaffold0016 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 182046 - 181994
Alignment:
Q  5 attgaagaacaaaactctacagaaaatctgattctcctcacttggctcttctc 57  Q
    ||||| ||||||| |||||||||||||| |||||||| | |||||||||||||    
T  182046 attgatgaacaaagctctacagaaaatcagattctcccctcttggctcttctc 181994  T

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Target: scaffold0001 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 131
Target Start/End: Original strand, 391424 - 391510
Alignment:
Q  46 ttggctcttctcctagctttctcttggttttctcccaaaa--actgtttgtacgtgaaactgcctctgacttttattttctaattttc 131  Q
    ||||||||||||||||| ||||||| ||||||||||||||   |||||| ||||||||||||  || |||| ||| |||||| |||||    
T  391424 ttggctcttctcctagccttctctt-gttttctcccaaaacctctgtttatacgtgaaactggttcagactcttagtttctatttttc 391510  T

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Target: scaffold0546 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 103
Target Start/End: Complemental strand, 9824 - 9745
Alignment:
Q  27 aaaatctga-ttctcctcacttggctcttctcctagctttctcttgg-ttttctcccaaaa-actgtttgtacgtgaaac 103  Q
    ||||||||| |||||| ||||||||||||||| | || || |||||| |||||||||||||  |||||||||||||||||    
T  9824 aaaatctgaattctccccacttggctcttctcttggccttgtcttggtttttctcccaaaactctgtttgtacgtgaaac 9745  T

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Target: scaffold0109 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 103
Target Start/End: Original strand, 3483 - 3562
Alignment:
Q  27 aaaatctga-ttctcctcacttggctcttctcctagctttctcttgg-ttttctcccaaaa-actgtttgtacgtgaaac 103  Q
    ||||||||| |||||| ||||||||||||||| | || || |||||| |||||||||||||  |||||||||||||||||    
T  3483 aaaatctgaattctccccacttggctcttctcttggccttgtcttggtttttctcccaaaactctgtttgtacgtgaaac 3562  T

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Target: scaffold0012 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 219
Target Start/End: Complemental strand, 222036 - 221978
Alignment:
Q  160 ttaactcccacttaattcactaaattctcatttaaccccaaaactccaattaaatcctaa 219  Q
    ||||||||| ||||||||  | |||| ||||||||| |||||||||||||||||||||||    
T  222036 ttaactccc-cttaattctattaattttcatttaactccaaaactccaattaaatcctaa 221978  T

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Target: scaffold0004 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 103
Target Start/End: Original strand, 385250 - 385310
Alignment:
Q  45 cttggctcttctcctagctttctcttggttttctcccaaaaa---ctgtttgtacgtgaaac 103  Q
    |||||||||||||||||||||||||| |||||||||| ||||   |||||||||||| ||||    
T  385250 cttggctcttctcctagctttctctt-gttttctccccaaaacctctgtttgtacgtaaaac 385310  T

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Target: scaffold0004; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 73 - 102
Target Start/End: Original strand, 60533 - 60562
Alignment:
Q  73 ttttctcccaaaaactgtttgtacgtgaaa 102  Q
    ||||||||||||||||||||||||||||||    
T  60533 ttttctcccaaaaactgtttgtacgtgaaa 60562  T

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Target: scaffold0011 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 20800 - 20751
Alignment:
Q  4 gattgaagaacaaaactctacagaaaatctgattctcctcacttggctct 53  Q
    |||||||| |||||||||||||||||||| | ||||| ||| ||||||||    
T  20800 gattgaaggacaaaactctacagaaaatccggttctcttcatttggctct 20751  T

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Target: scaffold0207 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 85
Target Start/End: Original strand, 9748 - 9787
Alignment:
Q  45 cttggctcttctcctagctttctcttggttttctcccaaaa 85  Q
    ||||||||||||||||| |||||||| ||||||||||||||    
T  9748 cttggctcttctcctagatttctctt-gttttctcccaaaa 9787  T

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