View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10098_low_43 (Length: 235)
Name: NF10098_low_43
Description: NF10098
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10098_low_43 |
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Alignment Details
Target: chr2 (Bit Score: 178; Significance: 4e-96; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 25 - 206
Target Start/End: Original strand, 15756760 - 15756941
Alignment:
| Q |
25 |
tatcacaagccttaaaagaaaatgcgcttttttatccataggaccacataaatacgattacactatacttttacccacactccgaataaaccccaaaaca |
124 |
Q |
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| T |
15756760 |
tatcacaagccttaaaagaaaatgcccttttttatccataggaccacataaatacgattacactatacttttacccacactccgaataaaccccaaaaca |
15756859 |
T |
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| Q |
125 |
aaaacaacaatataaaccaaagagttagaagcagaatttggattcagaatctgaacaagaagcaaccaaacgaatacgaaac |
206 |
Q |
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| T |
15756860 |
aaaacaacaatataaaccaaagagttagaagcagaatttggattcagaatctgaacaagaagcaaccaaacgaatacgaaac |
15756941 |
T |
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