View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10098_low_50 (Length: 214)
Name: NF10098_low_50
Description: NF10098
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10098_low_50 |
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Alignment Details
Target: chr1 (Bit Score: 151; Significance: 4e-80; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 151; E-Value: 4e-80
Query Start/End: Original strand, 28 - 197
Target Start/End: Original strand, 52770621 - 52770791
Alignment:
| Q |
28 |
caacattttcttcctcaatgctcaaaactataaaaattccttacaaattttctgtgtgttattttgataggatagtaaagaatt-ttctatctacattat |
126 |
Q |
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| T |
52770621 |
caacattttcttcctcaatgctcaaaactacaaaaattccttacaaattttctgtgtgttattttgataggatagtaaagaattctgctatctacattat |
52770720 |
T |
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| Q |
127 |
tgatcattgtccgtcccaagaaggtttcgcgagtcagagttattgttaatgttggtgccgccccaagctct |
197 |
Q |
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||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
52770721 |
tgatcattgtccgtcccaagaaggtttcgcgagtcagagttgttgttaatgttggtgccgccccaagctct |
52770791 |
T |
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