View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10101_low_16 (Length: 298)
Name: NF10101_low_16
Description: NF10101
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10101_low_16 |
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Alignment Details
Target: chr8 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 1 - 285
Target Start/End: Complemental strand, 10856425 - 10856125
Alignment:
| Q |
1 |
cttctaggaatatattatttacataagagggaatacaatggatggagagaattctccttgcaacaataaaaatgtaaaggctactgaaatgctggctgag |
100 |
Q |
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| T |
10856425 |
cttctaggaatatattatttgcataagagggaatacaatggatggagagaattctccttgcaacaataaaaatgtaaaggctactgaaatgctggctgag |
10856326 |
T |
|
| Q |
101 |
tggagaatggctctcactccccagtcccaattttcactccaaaactaaccccctttcctcattgactcaattccattatattcacattctccttactgat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
10856325 |
tggagaatggctctcactccccagtcccaattttcactccaaaactaaccccctttcctcattgactcaattccattatattcacattcttcttactgat |
10856226 |
T |
|
| Q |
201 |
t----------------ctcccaacctgctacctgtacaattagttacatttcatcttagttcatcatttttctcctcatttcctgccatctgtcctccc |
284 |
Q |
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| T |
10856225 |
tctctcaatccccaccactcccaagctgctacctgtacaattagttacatttcatcttagttcatcatttttctcctcatttcctgccatatgtcctccc |
10856126 |
T |
|
| Q |
285 |
t |
285 |
Q |
| |
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| |
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| T |
10856125 |
t |
10856125 |
T |
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