View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10101_low_20 (Length: 264)
Name: NF10101_low_20
Description: NF10101
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10101_low_20 |
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Alignment Details
Target: chr7 (Bit Score: 244; Significance: 1e-135; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 34306580 - 34306827
Alignment:
| Q |
1 |
acagatgggagctggaataatattcaacaacgggccaaaatggttttaaatggttcagatccaacggacatggtatataagctagctaccgaaccctgca |
100 |
Q |
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| T |
34306580 |
acagatgggagctggaataatattcaacaacgggccaaaatggttttaaatggttcagatccaacagacatggtatataagctagctaccgaaccctgca |
34306679 |
T |
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| Q |
101 |
gagaaataacaactgctgcaataccaaatatcaacatcatcttgctatttttgtttgtgcggttaacaagttgggtcttgatatagtcttcagtaatacg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34306680 |
gagaaataacaactgctgcaataccaaatatcaacatcatcttgctatttttgtttgtgcggttaacaagttgggtcttgatatagtcttcagtaatacg |
34306779 |
T |
|
| Q |
201 |
cttcttaagagaggatatcatgttattagtacaatccaactttgaaat |
248 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34306780 |
cttcttaagagaggatatcatgttattagtacaatccaactttgaaat |
34306827 |
T |
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