View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10101_low_6 (Length: 434)

Name: NF10101_low_6
Description: NF10101
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10101_low_6
NF10101_low_6
[»] chr6 (40 HSPs)
chr6 (4-254)||(16578302-16578561)
chr6 (4-254)||(16616819-16617078)
chr6 (4-254)||(16653237-16653496)
chr6 (4-254)||(16554994-16555253)
chr6 (4-254)||(16631550-16631809)
chr6 (1-229)||(25421428-25421669)
chr6 (4-229)||(34167205-34167443)
chr6 (1-229)||(6027369-6027609)
chr6 (4-229)||(13154040-13154278)
chr6 (4-229)||(33341908-33342148)
chr6 (4-229)||(34164983-34165221)
chr6 (4-254)||(27647985-27648232)
chr6 (123-229)||(6136108-6136216)
chr6 (1-221)||(3072580-3072805)
chr6 (1-136)||(412224-412369)
chr6 (186-254)||(16552976-16553044)
chr6 (186-254)||(16629532-16629600)
chr6 (1-205)||(6097285-6097497)
chr6 (148-229)||(13159051-13159134)
chr6 (1-46)||(30834537-30834582)
chr6 (1-45)||(2171534-2171578)
chr6 (1-45)||(16452331-16452375)
chr6 (1-45)||(5406202-5406246)
chr6 (1-45)||(5410527-5410571)
chr6 (1-45)||(31404677-31404721)
chr6 (1-40)||(5409076-5409115)
chr6 (1-40)||(5413401-5413440)
chr6 (111-221)||(2171350-2171456)
chr6 (160-224)||(412374-412437)
chr6 (1-45)||(17763112-17763156)
chr6 (1-45)||(21589053-21589096)
chr6 (1-45)||(21593786-21593829)
chr6 (1-45)||(3808710-3808754)
chr6 (1-45)||(33160354-33160398)
chr6 (1-42)||(16569144-16569184)
chr6 (1-42)||(33211191-33211231)
chr6 (1-45)||(5043749-5043793)
chr6 (1-45)||(17758145-17758189)
chr6 (1-45)||(26800709-26800753)
chr6 (1-45)||(26830126-26830169)
[»] chr5 (29 HSPs)
chr5 (1-229)||(10593380-10593621)
chr5 (4-229)||(40380216-40380454)
chr5 (1-229)||(25078243-25078484)
chr5 (1-229)||(25136212-25136453)
chr5 (4-229)||(40382427-40382665)
chr5 (1-227)||(29720486-29720721)
chr5 (1-227)||(29722646-29722881)
chr5 (4-229)||(16544534-16544774)
chr5 (1-228)||(29750969-29751206)
chr5 (1-229)||(22536103-22536336)
chr5 (4-229)||(16546756-16546996)
chr5 (1-224)||(9789042-9789270)
chr5 (1-224)||(18441462-18441694)
chr5 (1-221)||(16409597-16409824)
chr5 (1-224)||(26178004-26178234)
chr5 (1-224)||(26170884-26171114)
chr5 (1-45)||(37439263-37439307)
chr5 (1-45)||(213587-213631)
chr5 (1-45)||(13239873-13239917)
chr5 (1-45)||(13343182-13343226)
chr5 (1-45)||(25412882-25412926)
chr5 (1-221)||(30182710-30182933)
chr5 (1-45)||(28278438-28278481)
chr5 (1-45)||(36074045-36074089)
chr5 (1-45)||(40147383-40147426)
chr5 (1-45)||(5058167-5058210)
chr5 (1-42)||(16452202-16452242)
chr5 (1-46)||(27637614-27637659)
chr5 (1-45)||(27015645-27015688)
[»] chr1 (28 HSPs)
chr1 (1-256)||(9036538-9036801)
chr1 (1-229)||(44203754-44203995)
chr1 (4-228)||(21054083-21054314)
chr1 (1-224)||(40282499-40282730)
chr1 (1-228)||(9987323-9987558)
chr1 (1-204)||(20622072-20622283)
chr1 (1-224)||(51765519-51765747)
chr1 (1-45)||(8550789-8550833)
chr1 (1-45)||(13316354-13316398)
chr1 (1-45)||(3189452-3189496)
chr1 (1-45)||(3198269-3198313)
chr1 (1-45)||(3207108-3207152)
chr1 (1-45)||(29136369-29136413)
chr1 (1-45)||(13547092-13547135)
chr1 (1-45)||(13549003-13549046)
chr1 (1-45)||(37168420-37168463)
chr1 (1-45)||(42297977-42298021)
chr1 (1-44)||(20762794-20762837)
chr1 (1-45)||(11348820-11348863)
chr1 (1-45)||(28242426-28242470)
chr1 (1-45)||(47255342-47255386)
chr1 (1-43)||(34603699-34603740)
chr1 (1-45)||(193733-193776)
chr1 (2-42)||(834173-834212)
chr1 (1-45)||(7482233-7482276)
chr1 (1-45)||(31925710-31925753)
chr1 (1-45)||(37033074-37033118)
chr1 (1-45)||(47115294-47115338)
[»] chr7 (28 HSPs)
chr7 (1-229)||(1560470-1560712)
chr7 (4-229)||(6594363-6594601)
chr7 (1-229)||(18388565-18388806)
chr7 (1-229)||(18392001-18392242)
chr7 (4-229)||(6592145-6592383)
chr7 (1-229)||(32060127-32060368)
chr7 (1-230)||(20344019-20344256)
chr7 (1-221)||(43503975-43504200)
chr7 (1-156)||(39731491-39731656)
chr7 (98-221)||(24790230-24790349)
chr7 (2-102)||(24789964-24790074)
chr7 (1-45)||(23555162-23555206)
chr7 (1-45)||(29991175-29991219)
chr7 (1-45)||(34310718-34310762)
chr7 (1-45)||(35854036-35854080)
chr7 (1-41)||(25615975-25616015)
chr7 (1-45)||(25766962-25767006)
chr7 (1-45)||(22270095-22270138)
chr7 (1-45)||(32358057-32358100)
chr7 (1-45)||(48408926-48408970)
chr7 (1-46)||(2390404-2390448)
chr7 (1-45)||(3259117-3259160)
chr7 (1-45)||(8359318-8359362)
chr7 (1-45)||(19502300-19502344)
chr7 (1-43)||(6432093-6432134)
chr7 (1-46)||(29608859-29608903)
chr7 (1-45)||(4178895-4178939)
chr7 (1-45)||(48599337-48599380)
[»] chr3 (36 HSPs)
chr3 (1-229)||(25637549-25637793)
chr3 (1-229)||(3617572-3617813)
chr3 (1-230)||(45283108-45283346)
chr3 (4-230)||(54635249-54635484)
chr3 (4-229)||(4598328-4598566)
chr3 (4-229)||(4600549-4600787)
chr3 (4-229)||(10211520-10211758)
chr3 (4-229)||(10209300-10209538)
chr3 (4-229)||(10056344-10056582)
chr3 (4-229)||(10058566-10058804)
chr3 (4-229)||(10060788-10061026)
chr3 (4-229)||(10063010-10063248)
chr3 (4-229)||(10065232-10065470)
chr3 (8-229)||(10067435-10067669)
chr3 (4-254)||(6716624-6716881)
chr3 (1-224)||(7779821-7780050)
chr3 (1-224)||(23199957-23200184)
chr3 (1-221)||(801214-801435)
chr3 (1-154)||(23197823-23197985)
chr3 (1-45)||(7762387-7762431)
chr3 (1-45)||(9581404-9581448)
chr3 (1-45)||(19683891-19683935)
chr3 (1-45)||(37408580-37408624)
chr3 (1-45)||(45095285-45095329)
chr3 (1-45)||(5258146-5258190)
chr3 (1-45)||(7764586-7764630)
chr3 (1-45)||(9636128-9636172)
chr3 (1-45)||(34491334-34491377)
chr3 (1-45)||(43401803-43401847)
chr3 (1-45)||(43403746-43403790)
chr3 (1-42)||(4570074-4570115)
chr3 (1-45)||(5260325-5260369)
chr3 (1-45)||(6095602-6095645)
chr3 (1-45)||(49199471-49199515)
chr3 (1-45)||(41819525-41819569)
chr3 (1-45)||(54593826-54593869)
[»] scaffold0565 (1 HSPs)
scaffold0565 (1-229)||(2409-2650)
[»] chr2 (17 HSPs)
chr2 (1-229)||(13655834-13656078)
chr2 (1-229)||(12647191-12647432)
chr2 (1-204)||(6266813-6267023)
chr2 (1-221)||(4484151-4484376)
chr2 (1-224)||(32289686-32289916)
chr2 (1-156)||(30833468-30833633)
chr2 (1-155)||(4503017-4503179)
chr2 (1-45)||(36988078-36988122)
chr2 (1-45)||(45099876-45099920)
chr2 (1-41)||(2334424-2334464)
chr2 (1-45)||(6595008-6595052)
chr2 (1-45)||(36205667-36205711)
chr2 (1-45)||(5723258-5723302)
chr2 (1-45)||(45727051-45727094)
chr2 (3-45)||(35446887-35446928)
chr2 (1-46)||(1631734-1631778)
chr2 (1-42)||(33648294-33648335)
[»] chr4 (24 HSPs)
chr4 (1-229)||(8395725-8395967)
chr4 (1-229)||(8393516-8393758)
chr4 (51-229)||(7122867-7123046)
chr4 (51-229)||(7125086-7125265)
chr4 (4-229)||(5136190-5136429)
chr4 (4-229)||(5138415-5138654)
chr4 (1-218)||(31495130-31495362)
chr4 (1-45)||(29999808-29999852)
chr4 (1-45)||(56178639-56178683)
chr4 (1-45)||(5370085-5370129)
chr4 (1-45)||(13992295-13992339)
chr4 (1-45)||(48143165-48143209)
chr4 (1-45)||(2209836-2209880)
chr4 (1-45)||(52095365-52095408)
chr4 (1-44)||(41964538-41964580)
chr4 (1-45)||(8648261-8648304)
chr4 (1-45)||(41639548-41639591)
chr4 (1-45)||(50673850-50673893)
chr4 (3-45)||(52082666-52082708)
chr4 (1-45)||(379502-379546)
chr4 (1-45)||(6656078-6656121)
chr4 (1-45)||(7125024-7125068)
chr4 (1-45)||(46703623-46703667)
chr4 (1-45)||(50262703-50262747)
[»] scaffold0137 (1 HSPs)
scaffold0137 (4-229)||(6398-6638)
[»] chr8 (22 HSPs)
chr8 (1-254)||(3439625-3439886)
chr8 (4-232)||(25690079-25690316)
chr8 (4-229)||(15290649-15290887)
chr8 (4-229)||(15471018-15471256)
chr8 (4-229)||(42575130-42575367)
chr8 (1-224)||(2627858-2628087)
chr8 (1-45)||(17982775-17982819)
chr8 (1-45)||(31218379-31218423)
chr8 (1-45)||(42498316-42498360)
chr8 (1-45)||(1746221-1746265)
chr8 (1-45)||(34254333-34254377)
chr8 (1-45)||(34256509-34256553)
chr8 (1-45)||(19945361-19945405)
chr8 (1-45)||(42434994-42435037)
chr8 (1-45)||(44303977-44304021)
chr8 (1-45)||(18655522-18655565)
chr8 (2-45)||(11384108-11384150)
chr8 (75-155)||(31218459-31218541)
chr8 (1-42)||(43036545-43036585)
chr8 (173-221)||(3303494-3303541)
chr8 (1-45)||(4283646-4283689)
chr8 (173-221)||(43036720-43036767)
[»] scaffold0674 (1 HSPs)
scaffold0674 (1-208)||(3554-3772)
[»] scaffold1808 (2 HSPs)
scaffold1808 (51-208)||(49-205)
scaffold1808 (15-44)||(1-30)
[»] scaffold0491 (2 HSPs)
scaffold0491 (1-156)||(11042-11207)
scaffold0491 (1-156)||(8616-8781)
[»] scaffold1519 (1 HSPs)
scaffold1519 (1-45)||(1037-1081)
[»] scaffold0286 (2 HSPs)
scaffold0286 (1-45)||(11679-11723)
scaffold0286 (111-221)||(11804-11911)
[»] scaffold0002 (1 HSPs)
scaffold0002 (1-45)||(434655-434699)
[»] scaffold0176 (1 HSPs)
scaffold0176 (1-45)||(18006-18050)
[»] scaffold0236 (1 HSPs)
scaffold0236 (1-42)||(10611-10651)
[»] scaffold0016 (1 HSPs)
scaffold0016 (1-45)||(114724-114768)
[»] scaffold0466 (1 HSPs)
scaffold0466 (1-45)||(7449-7492)


Alignment Details
Target: chr6 (Bit Score: 204; Significance: 1e-111; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 4 - 254
Target Start/End: Complemental strand, 16578561 - 16578302
Alignment:
Q  4 ctctcctccagagtaggtcaagtttggaccgaactgggtgaa------------tgtatttgttttcttcttccctctccttgtttatcttgtgattgtg 91  Q
    ||||||||||||||||||||||||||||||||||||||||||            ||||||||||||||||||||||||||||||||||||||||||||||    
T  16578561 ctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttggtgtatttgttttcttcttccctctccttgtttatcttgtgattgtg 16578462  T
Q  92 ctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttgcttgcacaatacactttgtttggtggttaccactctccttgg 191  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||    
T  16578461 ctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttgcttgcac---acactttgtttggtggttaccactctccttgg 16578365  T
Q  192 ctccacacatcattattttgtattggtgtggttcgatcttgtgggggatcggaattcacaaca 254  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  16578364 ctccacacatcattatttagtattggtgtggttcgatcttgtgggggatcggaattcacaaca 16578302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 4 - 254
Target Start/End: Original strand, 16616819 - 16617078
Alignment:
Q  4 ctctcctccagagtaggtcaagtttggaccgaactgggtgaa------------tgtatttgttttcttcttccctctccttgtttatcttgtgattgtg 91  Q
    ||||||||||||||||||||||||||||||||||||||||||            ||||||||||||||||||||||||||||||||||||||||||||||    
T  16616819 ctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttggtgtatttgttttcttcttccctctccttgtttatcttgtgattgtg 16616918  T
Q  92 ctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttgcttgcacaatacactttgtttggtggttaccactctccttgg 191  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||    
T  16616919 ctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttgcttgcac---acactttgtttggtggttaccactctccttgg 16617015  T
Q  192 ctccacacatcattattttgtattggtgtggttcgatcttgtgggggatcggaattcacaaca 254  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  16617016 ctccacacatcattatttagtattggtgtggttcgatcttgtgggggatcggaattcacaaca 16617078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 4 - 254
Target Start/End: Original strand, 16653237 - 16653496
Alignment:
Q  4 ctctcctccagagtaggtcaagtttggaccgaactgggtgaa------------tgtatttgttttcttcttccctctccttgtttatcttgtgattgtg 91  Q
    ||||||||||||||||||||||||||||||||||||||||||            ||||||||||||||||||||||||||||||||||||||||||||||    
T  16653237 ctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttggtgtatttgttttcttcttccctctccttgtttatcttgtgattgtg 16653336  T
Q  92 ctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttgcttgcacaatacactttgtttggtggttaccactctccttgg 191  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||    
T  16653337 ctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttgcttgcac---acactttgtttggtggttaccactctccttgg 16653433  T
Q  192 ctccacacatcattattttgtattggtgtggttcgatcttgtgggggatcggaattcacaaca 254  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  16653434 ctccacacatcattatttagtattggtgtggttcgatcttgtgggggatcggaattcacaaca 16653496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 4 - 254
Target Start/End: Original strand, 16554994 - 16555253
Alignment:
Q  4 ctctcctccagagtaggtcaagtttggaccgaactgggtgaa------------tgtatttgttttcttcttccctctccttgtttatcttgtgattgtg 91  Q
    |||||||||| |||||||||||||||||||||||||||||||            ||||||||||||||||||||||||||||||||||||||||||||||    
T  16554994 ctctcctccaaagtaggtcaagtttggaccgaactgggtgaacaatctctttggtgtatttgttttcttcttccctctccttgtttatcttgtgattgtg 16555093  T
Q  92 ctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttgcttgcacaatacactttgtttggtggttaccactctccttgg 191  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||    
T  16555094 ctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttgcttgcac---acactttgtttggtggttaccactctccttgg 16555190  T
Q  192 ctccacacatcattattttgtattggtgtggttcgatcttgtgggggatcggaattcacaaca 254  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  16555191 ctccacacatcattatttagtattggtgtggttcgatcttgtgggggatcggaattcacaaca 16555253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 4 - 254
Target Start/End: Original strand, 16631550 - 16631809
Alignment:
Q  4 ctctcctccagagtaggtcaagtttggaccgaactgggtgaa------------tgtatttgttttcttcttccctctccttgtttatcttgtgattgtg 91  Q
    |||||||||| |||||||||||||||||||||||||||||||            ||||||||||||||||||||||||||||||||||||||||||||||    
T  16631550 ctctcctccaaagtaggtcaagtttggaccgaactgggtgaacaatctctttggtgtatttgttttcttcttccctctccttgtttatcttgtgattgtg 16631649  T
Q  92 ctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttgcttgcacaatacactttgtttggtggttaccactctccttgg 191  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||    
T  16631650 ctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttgcttgcac---acactttgtttggtggttaccactctccttgg 16631746  T
Q  192 ctccacacatcattattttgtattggtgtggttcgatcttgtgggggatcggaattcacaaca 254  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  16631747 ctccacacatcattatttagtattggtgtggttcgatcttgtgggggatcggaattcacaaca 16631809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 25421428 - 25421669
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa-----------tgtat-ttgttttcttcttccctctccttgtttatcttgtgatt 88  Q
    |||||||||||||||||||||||||||||||||||||||||||||           ||| | ||||||||||||||||||  ||||||||||||||||||    
T  25421428 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttgtgtttattgttttcttcttccctc--cttgtttatcttgtgatt 25421525  T
Q  89 gt-gctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttgcttgcacaatacactttgtttggtggttaccactctcc 187  Q
    || ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| |||||||||||||||||    
T  25421526 gttgctttgtgtttcacacttggttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaataaactttgttcggtggttaccactctcc 25421625  T
Q  188 ttggctccacacatcattat--tttgtattggtgtggttcgatc 229  Q
     | |||||||||||||||||  ||||||||||||||||||||||    
T  25421626 gtcgctccacacatcattattctttgtattggtgtggttcgatc 25421669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 4 - 229
Target Start/End: Original strand, 34167205 - 34167443
Alignment:
Q  4 ctctcctccagagtaggtcaagtttggaccgaactgggtgaa-----------tgtat-ttgttttcttcttccctctccttgtttatcttgtgattgt- 90  Q
    ||||||||||||||||||||||||||||||||||||||||||           ||| | |||||||||||||||||||||||||  |||||||||||||     
T  34167205 ctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttgtgtttattgttttcttcttccctctccttgt--atcttgtgattgtt 34167302  T
Q  91 gctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttgcttgcacaatacactttgtttggtggttaccactctccttg 190  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||||| |||||   |||||||||||||||||||||||| |     
T  34167303 gctttgtgtttcacacttggttcctagatttgatctaggtggtgttttgttgttttttgcttgctcaatattttttgtttggtggttaccactctccgtc 34167402  T
Q  191 gctccacacatcattat--tttgtattggtgtggttcgatc 229  Q
    |||||||||||||||||  ||||||||||||||||||||||    
T  34167403 gctccacacatcattattctttgtattggtgtggttcgatc 34167443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 6027369 - 6027609
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa-----------tgtat-ttgttttcttcttccctctccttgtttatcttgtgatt 88  Q
    |||||||||||||||||| ||||||||||||||||||||||||||           ||| | ||||||||||||||||||  | | ||||||||||||||    
T  6027369 aatctctcctccagagtatgtcaagtttggaccgaactgggtgaacaatctctttgtgtttattgttttcttcttccctc--cat-tttatcttgtgatt 6027465  T
Q  89 gt-gctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttgcttgcacaatacactttgtttggtggttaccactctcc 187  Q
    || ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||||||| ||||||    
T  6027466 gttgctttgtgtttcacacttggttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaatacaccttgttaggtggttacccctctcc 6027565  T
Q  188 ttggctccacacatcattat--tttgtattggtgtggttcgatc 229  Q
     | |||||||||||||||||  ||||||||||||||||||||||    
T  6027566 gtcgctccacacatcattattctttgtattggtgtggttcgatc 6027609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 4 - 229
Target Start/End: Original strand, 13154040 - 13154278
Alignment:
Q  4 ctctcctccagagtaggtcaagtttggaccgaactgggtgaa-----------tgtat-ttgttttcttcttccctctccttgtttatcttgtgattgt- 90  Q
    |||||||||||||||||||||||||||||||||||||||||            ||| | |||||||||||||||||||||||||  |||||||||||||     
T  13154040 ctctcctccagagtaggtcaagtttggaccgaactgggtgaccaatctctttgtgtttattgttttcttcttccctctccttgt--atcttgtgattgtt 13154137  T
Q  91 gctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttgcttgcacaatacactttgtttggtggttaccactctccttg 190  Q
    ||||||||||||||||||| |||||||||| |||||||||||||| ||||||||| |||||||| |||||  ||||||| ||||||||||||||||| |     
T  13154138 gctttgtgtttcacacttggttcctagattcgatctaggtggtgtattgttgtttcttgcttgctcaataagctttgttaggtggttaccactctccgtc 13154237  T
Q  191 gctccacacatcattat--tttgtattggtgtggttcgatc 229  Q
    |||||||||||||||||  ||||||||||||||||||||||    
T  13154238 gctccacacatcattattctttgtattggtgtggttcgatc 13154278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 4 - 229
Target Start/End: Complemental strand, 33342148 - 33341908
Alignment:
Q  4 ctctcctccagagtaggtcaagtttggaccgaactgggtgaa-----------tgtat-ttgttttcttcttccctctcc-ttgtttatcttgtgatt-- 88  Q
    |||||||||||||||||||||||||||||||||||||||||            ||| | ||||||||||||||||||||| |||||||||||||| ||      
T  33342148 ctctcctccagagtaggtcaagtttggaccgaactgggtgaccaatctctttgtgtttattgttttcttcttccctctcctttgtttatcttgtgtttag 33342049  T
Q  89 gtgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttgcttgcacaatacactttgtttggtggttaccactctcct 188  Q
     |||||  ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||  |||||||||||||||||||||||||     
T  33342048 ttgctt--tgtttcacacttggttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaataagctttgtttggtggttaccactctccg 33341951  T
Q  189 tggctccacacatcattat--tttgtattggtgtggttcgatc 229  Q
    | |||||||||||||||||  ||||||||||||||||||||||    
T  33341950 tcgctccacacatcattattctttgtattggtgtggttcgatc 33341908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 4 - 229
Target Start/End: Original strand, 34164983 - 34165221
Alignment:
Q  4 ctctcctccagagtaggtcaagtttggaccgaactgggtgaa-----------tgtat-ttgttttcttcttccctctccttgtttatcttgtgatt--g 89  Q
    |||||||||||||||||||||||||||||||||||||||||            ||| | ||||||||||||||||||||||||||||||||||| ||       
T  34164983 ctctcctccagagtaggtcaagtttggaccgaactgggtgaccaatctctttgtgtttattgttttcttcttccctctccttgtttatcttgtgtttagt 34165082  T
Q  90 tgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttgcttgcacaatacactttgtttggtggttaccactctcctt 189  Q
    |||||  |||||||||||||||||||||||| ||||||||||||| |||||||||| |||||||| |||||  ||| ||||||||||||||||||||| |    
T  34165083 tgctt--tgtttcacacttgtttcctagattggatctaggtggtg-tttgttgtttcttgcttgctcaataagcttggtttggtggttaccactctccgt 34165179  T
Q  190 ggctccacacatcattat--tttgtattggtgtggttcgatc 229  Q
     |||||||||||||||||  ||||||||||||||||||||||    
T  34165180 cgctccacacatcattattctttgtattggtgtggttcgatc 34165221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 4 - 254
Target Start/End: Original strand, 27647985 - 27648232
Alignment:
Q  4 ctctcctccagagtaggtcaagtttggaccgaactgggtgaa-----------tgtatttgttttcttcttccctctccttgtttatcttgtgattgtgc 92  Q
    |||||||||||||||| |||||||||||||||||||||||||           ||  ||||||||||||||||||||||||  ||||||||||  |        
T  27647985 ctctcctccagagtagatcaagtttggaccgaactgggtgaacaatctcttggtgcttttgttttcttcttccctctcctt--ttatcttgtgtat---- 27648078  T
Q  93 tttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttgcttgcacaatacactttgtttggtggttaccactctccttggc 192  Q
      || ||||| ||||||||||||||||||||||||||||||||||||||| || |||||||||| | |||||||||| ||||||||||||||||||| ||    
T  27648079 --tgagtttctcacttgtttcctagattagatctaggtggtgttttgttgattattgcttgcac-acacactttgttcggtggttaccactctcctttgc 27648175  T
Q  193 tccacacatcattattttgtattggtgtggttcgatcttgtgggggatcggaattcacaaca 254  Q
    ||||||||||||  | |||||||||||||||||||||   | || |||||||||||||||||    
T  27648176 tccacacatcat--tcttgtattggtgtggttcgatc---taggtgatcggaattcacaaca 27648232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 123 - 229
Target Start/End: Complemental strand, 6136216 - 6136108
Alignment:
Q  123 atctaggtggtgttttgttgtttgttgcttgcacaatacactttgtttggtggttaccactctccttggctccacacatcattat--tttgtattggtgt 220  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||  ||||||||||| |    
T  6136216 atctaggtggtgttttgttgtttcttgcttgcacaatacactttgtttggtggttaccactctccgttgctccacacatcattattctttgtattggtat 6136117  T
Q  221 ggttcgatc 229  Q
    |||||||||    
T  6136116 ggttcgatc 6136108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 3072805 - 3072580
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa-----------tgtatttgttttcttcttccctctccttgtttatcttgtgattg 89  Q
    |||||||||||||||||||||||||||||||||||||||||||||           ||| ||||||||| ||||||||||||||  |||||||||| |||    
T  3072805 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtctttgttttcctcttccctctcctt--ttatcttgtgcttg 3072708  T
Q  90 tgctttgtgtttcacacttgtttcctagattagatctaggtggt-gttttgttgtttgttgcttgcacaatacactttgtttggtggttaccactctcct 188  Q
    || ||| || ||  |||||||||||||||||||||||| ||| |  |||||||| || ||||||||||   |||||||| || |||||||| ||| ||||    
T  3072707 tgttttatgcttttcacttgtttcctagattagatctatgtgctatttttgttgattattgcttgcac---acactttg-ttagtggttactactttcct 3072612  T
Q  189 tggctccacacatcattattttgtattggtgtg 221  Q
    | ||||||||||||| ||||| |||||||||||    
T  3072611 ttgctccacacatca-tatttcgtattggtgtg 3072580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 412224 - 412369
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa------------tgtatttgttttcttcttccctctccttgtttatcttgtgatt 88  Q
    |||||||||||||||||||||||||||||||||||||||||||||            ||||||||||||||||||||||||||||  |||||||||| ||    
T  412224 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttggtgtatttgttttcttcttccctctcctt--ttatcttgtgctt 412321  T
Q  89 gtgctttgtgtttcacacttgtttcctagattagatctaggtggtgtt 136  Q
    |||  ||||||||  |||||||| ||||||||||||||||||| ||||    
T  412322 gtgtattgtgtttttcacttgttacctagattagatctaggtgctgtt 412369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 186 - 254
Target Start/End: Original strand, 16552976 - 16553044
Alignment:
Q  186 ccttggctccacacatcattattttgtattggtgtggttcgatcttgtgggggatcggaattcacaaca 254  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  16552976 ccttggctccacacatcattatttagtattggtgtggttcgatcttgtgggggatcggaattcacaaca 16553044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 186 - 254
Target Start/End: Original strand, 16629532 - 16629600
Alignment:
Q  186 ccttggctccacacatcattattttgtattggtgtggttcgatcttgtgggggatcggaattcacaaca 254  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  16629532 ccttggctccacacatcattatttagtattggtgtggttcgatcttgtgggggatcggaattcacaaca 16629600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 6097497 - 6097285
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa------------tgtatttgttttcttcttccctctccttgtttatcttgtgatt 88  Q
    |||||||||||||||||||||||||||||||||||||||||||||            ||| ||||||||| ||||||||||||||||  |||||||||||    
T  6097497 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttggtgtctttgttttcctcttccctctccttgt--atcttgtgatt 6097400  T
Q  89 gtgctttgtgtttcac-acttgtttcctagattagatctaggtggtg-ttttgttgtttgttgcttgcacaatacactttgtttggtggttaccactctc 186  Q
    |||  ||||||||  | ||||||| ||||||||||||| ||||| || |||||||| || | ||||||||   |||||||| || |||||||| ||| ||    
T  6097399 gtgtattgtgtttttccacttgttacctagattagatcaaggtgctgtttttgttgattatagcttgcac---acactttg-ttagtggttactactttc 6097304  T
Q  187 cttggctccacacatcatt 205  Q
    | | |||||||||||||||    
T  6097303 cgttgctccacacatcatt 6097285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 148 - 229
Target Start/End: Original strand, 13159051 - 13159134
Alignment:
Q  148 tgcttgcacaatacactttgtttggtggttaccactctccttggctccacacatcattat--tttgtattggtgtggttcgatc 229  Q
    ||||||| |||||  ||||||| ||||||||||||||||| | |||||||||||||||||  ||||||||||||||||||||||    
T  13159051 tgcttgctcaataagctttgttaggtggttaccactctccgtcgctccacacatcattattctttgtattggtgtggttcgatc 13159134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 30834582 - 30834537
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaat 46  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  30834582 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaat 30834537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 2171578 - 2171534
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  2171578 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 2171534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 16452375 - 16452331
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  16452375 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 16452331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 5406246 - 5406202
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    ||||||||||||||||||||||||||||| |||||||||||||||    
T  5406246 aatctctcctccagagtaggtcaagtttgaaccgaactgggtgaa 5406202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 5410571 - 5410527
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    ||||||||||||||||||||||||||||| |||||||||||||||    
T  5410571 aatctctcctccagagtaggtcaagtttgaaccgaactgggtgaa 5410527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 31404721 - 31404677
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    |||||||||||||||||||| ||||||||||||||||||||||||    
T  31404721 aatctctcctccagagtaggccaagtttggaccgaactgggtgaa 31404677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 5409115 - 5409076
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgg 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  5409115 aatctctcctccagagtaggtcaagtttggaccgaactgg 5409076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 5413440 - 5413401
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgg 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  5413440 aatctctcctccagagtaggtcaagtttggaccgaactgg 5413401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 111 - 221
Target Start/End: Complemental strand, 2171456 - 2171350
Alignment:
Q  111 ttcctagattagatctaggtggtgtt-ttgttgtttgttgcttgcacaatacactttgtttggtggttaccactctccttggctccacacatcattattt 209  Q
    ||||||||||||||||||||| |||| |||||| || ||||||||||   |||||||| || |||||||| ||| ||||| ||||||||||||| || ||    
T  2171456 ttcctagattagatctaggtgctgttattgttgattattgcttgcac---acactttg-ttagtggttactactttcctttgctccacacatca-tagtt 2171362  T
Q  210 tgtattggtgtg 221  Q
     |||||||||||    
T  2171361 cgtattggtgtg 2171350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 160 - 224
Target Start/End: Original strand, 412374 - 412437
Alignment:
Q  160 acactttgtttggtggttaccactctccttggctccacacatcattattttgtattggtgtggtt 224  Q
    |||||||||||||||||||| ||| ||||| ||||||||||||| || || ||||||||||||||    
T  412374 acactttgtttggtggttactactttcctttgctccacacatca-tacttggtattggtgtggtt 412437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 17763112 - 17763156
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||    
T  17763112 aatctctcctccagagtagatcaagtttggaccgaactaggtgaa 17763156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 21589053 - 21589096
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    ||||||||||||||||||||||||| |||||||||||||||||||    
T  21589053 aatctctcctccagagtaggtcaag-ttggaccgaactgggtgaa 21589096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 21593786 - 21593829
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    ||||||||||||||||||||||||| |||||||||||||||||||    
T  21593786 aatctctcctccagagtaggtcaag-ttggaccgaactgggtgaa 21593829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 3808754 - 3808710
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    ||||||||||||||||||||||| | |||||||||||| ||||||    
T  3808754 aatctctcctccagagtaggtcatgattggaccgaactaggtgaa 3808710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 33160398 - 33160354
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    ||||||||||||||||||  ||||||||||||| |||||||||||    
T  33160398 aatctctcctccagagtatttcaagtttggaccaaactgggtgaa 33160354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 16569144 - 16569184
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggt 42  Q
    ||||||||||||||| ||||||||| ||||||||||||||||    
T  16569144 aatctctcctccagattaggtcaag-ttggaccgaactgggt 16569184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 33211231 - 33211191
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggt 42  Q
    ||||||||| ||||||||||||||| ||||||||||||||||    
T  33211231 aatctctcccccagagtaggtcaag-ttggaccgaactgggt 33211191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 5043749 - 5043793
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    ||||||||||||| |||||||||   |||||||||||||||||||    
T  5043749 aatctctcctccatagtaggtcattgttggaccgaactgggtgaa 5043793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 17758145 - 17758189
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    |||||| |||| ||||||| |||||||||||||||||| ||||||    
T  17758145 aatctcccctctagagtagttcaagtttggaccgaactaggtgaa 17758189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 26800709 - 26800753
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    |||||||||||||||||||||||   |||||||||||||| ||||    
T  26800709 aatctctcctccagagtaggtcattgttggaccgaactggatgaa 26800753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 26830169 - 26830126
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    ||||||||||||| |||||||||||||| ||| ||||||||||||    
T  26830169 aatctctcctccaaagtaggtcaagttt-gactgaactgggtgaa 26830126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 181; Significance: 1e-97; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 10593380 - 10593621
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa-----------tgtatttgttttcttcttccctctccttgtttatcttgtgattg 89  Q
    |||||||||||||||||||||||||||||||||||||||||||||           |||||||||||||| |||||||||||||||||||||||||||||    
T  10593380 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttttctacttccctctccttgtttatcttgtgattg 10593479  T
Q  90 tgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttgcttgcacaatacactttgtttggtggttaccactctcctt 189  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  10593480 tgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttgcttgcacaatacactttgtttggtggttaccactctccgt 10593579  T
Q  190 ggctccacacatcattat--tttgtattggtgtggttcgatc 229  Q
     |||||||||||||||||  ||||||||||||||||||||||    
T  10593580 cgctccacacatcattattctttgtattggtgtggttcgatc 10593621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 4 - 229
Target Start/End: Original strand, 40380216 - 40380454
Alignment:
Q  4 ctctcctccagagtaggtcaagtttggaccgaactgggtgaa-----------tgtat-ttgttttcttcttccctctccttgtttatcttgtgattgt- 90  Q
    ||||||||||||||||||||||||||||||||||||||||||           ||| | ||||||||||||||||||  ||||||||||||||||||||     
T  40380216 ctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttgtgtttattgttttcttcttccctc--cttgtttatcttgtgattgtt 40380313  T
Q  91 gctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttgcttgcacaatacactttgtttggtggttaccactctccttg 190  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| |     
T  40380314 gctttgtgtttcacacttggttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaataaactttgtttggtggttaccactctccgtc 40380413  T
Q  191 gctccacacatcattat--tttgtattggtgtggttcgatc 229  Q
    |||||||||||||||||  ||||||||||||||||||||||    
T  40380414 gctccacacatcattattctttgtattggtgtggttcgatc 40380454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 25078243 - 25078484
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa-----------tgtat-ttgttttcttcttccctctccttgtttatcttgtgatt 88  Q
    |||||||||||||||||||||||||||||||||||||||||||||           ||| | |||||||||||||||||||||||||  |||||||||||    
T  25078243 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttgtgtttattgttttcttcttccctctccttgt--atcttgtgatt 25078340  T
Q  89 gt-gctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttgcttgcacaatacactttgtttggtggttaccactctcc 187  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| |||||||||||||||||    
T  25078341 gttgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaataaactttgttcggtggttaccactctcc 25078440  T
Q  188 ttggctccacacatcattat--tttgtattggtgtggttcgatc 229  Q
     | ||||||||||||||| |  ||||||||||||||||||||||    
T  25078441 gtcgctccacacatcattcttctttgtattggtgtggttcgatc 25078484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 25136212 - 25136453
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa-----------tgtat-ttgttttcttcttccctctccttgtttatcttgtgatt 88  Q
    |||||||||||||||||||||||||||||||||||||||||||||           ||| | |||||||||||||||||||||||||  |||||||||||    
T  25136212 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttgtgtttattgttttcttcttccctctccttgt--atcttgtgatt 25136309  T
Q  89 gt-gctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttgcttgcacaatacactttgtttggtggttaccactctcc 187  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| |||||||||||||||||    
T  25136310 gttgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaataaactttgttcggtggttaccactctcc 25136409  T
Q  188 ttggctccacacatcattat--tttgtattggtgtggttcgatc 229  Q
     | ||||||||||||||| |  ||||||||||||||||||||||    
T  25136410 gtcgctccacacatcattcttctttgtattggtgtggttcgatc 25136453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 4 - 229
Target Start/End: Original strand, 40382427 - 40382665
Alignment:
Q  4 ctctcctccagagtaggtcaagtttggaccgaactgggtgaa-----------tgtat-ttgttttcttcttccctctccttgtttatcttgtgattgt- 90  Q
    ||||||||||||||||||||||||||||||||||||||||||           ||| | ||||||||||||||||||  ||||||||||||||||||||     
T  40382427 ctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttgtgtttattgttttcttcttccctc--cttgtttatcttgtgattgtt 40382524  T
Q  91 gctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttgcttgcacaatacactttgtttggtggttaccactctccttg 190  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||       
T  40382525 gctttgtgtttcacacttggttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaataaactttgtttggtggttaccactctccgcc 40382624  T
Q  191 gctccacacatcattat--tttgtattggtgtggttcgatc 229  Q
    |||||||||||||||||  ||||||||||||||||||||||    
T  40382625 gctccacacatcattattctttgtattggtgtggttcgatc 40382665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 29720486 - 29720721
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa-----------tgtatttgttttcttcttccctctccttgtttatcttgtgattg 89  Q
    ||||||||||| |||||||||||||||||||||||||||||||||           ||| ||||||||||||||||||||||||  ||||||||||||||    
T  29720486 aatctctcctctagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtctttgttttcttcttccctctcctt--ttatcttgtgattg 29720583  T
Q  90 tgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttgcttgcacaatacactttgtttggtggttaccactctcctt 189  Q
    ||  ||||||||| ||||||||||||||||||||||||||||||||||||||| || ||||||| || | ||||||||||||||||||||||||||||||    
T  29720584 tgtattgtgtttctcacttgtttcctagattagatctaggtggtgttttgttgattattgcttgtac-acacactttgtttggtggttaccactctcctt 29720682  T
Q  190 ggctccacacatcat-tattttgtattggtgtggttcga 227  Q
     |||||||||| ||| | | |||||||||||||||||||    
T  29720683 tgctccacacaacatatttcttgtattggtgtggttcga 29720721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 29722646 - 29722881
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa-----------tgtatttgttttcttcttccctctccttgtttatcttgtgattg 89  Q
    |||||||||||||||||||||||| ||||||||||||||||||||           ||| ||||||||||||||||||||||||  ||||||||||||||    
T  29722646 aatctctcctccagagtaggtcaaatttggaccgaactgggtgaacaatctcttggtgtctttgttttcttcttccctctcctt--ttatcttgtgattg 29722743  T
Q  90 tgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttgcttgcacaatacactttgtttggtggttaccactctcctt 189  Q
    ||  ||||||||| ||||||||||||||||||||||||||||||||||||||| || ||||||| || | |||||||||||||||||||||||||| |||    
T  29722744 tgtattgtgtttctcacttgtttcctagattagatctaggtggtgttttgttgattattgcttgtac-acacactttgtttggtggttaccactctactt 29722842  T
Q  190 ggctccacacatcat-tattttgtattggtgtggttcga 227  Q
     |||||||||| ||| | | |||||||||||||||||||    
T  29722843 tgctccacacaccatatttcttgtattggtgtggttcga 29722881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 4 - 229
Target Start/End: Original strand, 16544534 - 16544774
Alignment:
Q  4 ctctcctccagagtaggtcaagtttggaccgaactgggtgaa-----------tgtat-ttgttttcttcttccctctcc-ttgtttatcttgtgatt-- 88  Q
    |||||||||||||||||||||||||||||||||||||||||            ||| | ||||||||||||||||||||| |||||||||||||| ||      
T  16544534 ctctcctccagagtaggtcaagtttggaccgaactgggtgaccaatctctttgtgtttattgttttcttcttccctctcctttgtttatcttgtgtttag 16544633  T
Q  89 gtgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttgcttgcacaatacactttgtttggtggttaccactctcct 188  Q
     |||||  |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| |||||  |||||||||||||||||||||||||     
T  16544634 ttgctt--tgtttcacacttgtttcctagattggatctaggtggtgttttgttgtttcttgcttgctcaataagctttgtttggtggttaccactctccg 16544731  T
Q  189 tggctccacacatcattat--tttgtattggtgtggttcgatc 229  Q
    | |||||||||||||||||  ||||||||||||||||||||||    
T  16544732 tcgctccacacatcattattctttgtattggtgtggttcgatc 16544774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 29751206 - 29750969
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa-----------tgtattt-gttttcttcttccctctccttgtttatcttgtgatt 88  Q
    |||||||||||||||||||||||||||||||||||||||||||||           ||| ||| |||||||||||||||||||||  |||||||||||||    
T  29751206 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtcttttgttttcttcttccctctcctt--ttatcttgtgatt 29751109  T
Q  89 gtgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttgcttgcacaatacactttgtttggtggttaccactctcct 188  Q
    |||   |||||||| ||||||||| |||||||| |||||||||||||||||||| || |||||||||| | |||| ||||||||||||||||||||||||    
T  29751108 gtgtactgtgtttctcacttgttttctagattatatctaggtggtgttttgttgattattgcttgcac-acacacattgtttggtggttaccactctcct 29751010  T
Q  189 tggctccacacatcat-tattttgtattggtgtggttcgat 228  Q
    | |||||||||||||| | | ||||||||||||||||||||    
T  29751009 ttgctccacacatcatatttcttgtattggtgtggttcgat 29750969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 22536336 - 22536103
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa-----------tgtatttgttttcttcttccctctccttgtttatcttgtgattg 89  Q
    |||||||||||||||||||||||||||||||||||||||||||||           ||  ||||||||||||||||||| ||||  ||||||||||||||    
T  22536336 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgcttttgttttcttcttccctcccctt--ttatcttgtgattg 22536239  T
Q  90 tgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttgcttgcacaatacactttg-tttggtggttaccactctcct 188  Q
    || |||| ||||| ||||||||||||||||||||||||||| || |||||||| |||||||||||   |||||||||| ||||||||||||| ||||||     
T  22536238 tgttttgagtttctcacttgtttcctagattagatctaggt-gttttttgttgattgttgcttgc---atacactttgctttggtggttaccgctctccg 22536143  T
Q  189 tggctccacacatcattattttgtattggtgtggttcgatc 229  Q
    | |||||||||||||||  ||||||||||||||||||||||    
T  22536142 tcgctccacacatcatt-ctttgtattggtgtggttcgatc 22536103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 4 - 229
Target Start/End: Original strand, 16546756 - 16546996
Alignment:
Q  4 ctctcctccagagtaggtcaagtttggaccgaactgggtgaa-----------tgtat-ttgttttcttcttccctctcc-ttgtttatcttgtgatt-- 88  Q
    |||||||||||||||||||||||||||||||||||||||||            ||| | ||||||||||||||||||||| |||||||||||||| ||      
T  16546756 ctctcctccagagtaggtcaagtttggaccgaactgggtgaccaatctctttgtgtttattgttttcttcttccctctcctttgtttatcttgtgtttag 16546855  T
Q  89 gtgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttgcttgcacaatacactttgtttggtggttaccactctcct 188  Q
     |||||  |||||||||||||||||||||||| ||| |||||||||||||||||||| |||||||| |||||  |||||||||||||||| ||||||||     
T  16546856 ttgctt--tgtttcacacttgtttcctagattggatttaggtggtgttttgttgtttcttgcttgctcaataagctttgtttggtggttatcactctccg 16546953  T
Q  189 tggctccacacatcattat--tttgtattggtgtggttcgatc 229  Q
    | |||||||||||||||||  ||||||||||||||||||||||    
T  16546954 tcgctccacacatcattattctttgtattggtgtggttcgatc 16546996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 9789270 - 9789042
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa------------tgtatttgttttcttcttccctctccttgtttatcttgtgatt 88  Q
    |||||||||||||||||||||||||||||||||||||||||||||            ||| ||||||||| ||||||||||||  |||||||||||| ||    
T  9789270 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttggtgtctttgttttcctcttccctctcc--gtttatcttgtgctt 9789173  T
Q  89 gtgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttgcttgcacaatacactttgtttggtggttaccactctcct 188  Q
    |||  ||||||||  ||||| |||||||||||||||||||||| |||||||||| || ||||||||||   |||||||| ||||||||||| ||| ||||    
T  9789172 gtgtattgtgtttttcacttctttcctagattagatctaggtgctgttttgttgatttttgcttgcac---acactttg-ttggtggttactactttcct 9789077  T
Q  189 tggctccacacatcattattttgtattggtgtggtt 224  Q
    | ||||||||||||| || |||||||||||||||||    
T  9789076 ttgctccacacatca-tactttgtattggtgtggtt 9789042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 18441694 - 18441462
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa------------tgtatttgttttcttcttccctctccttgtttatcttgtgatt 88  Q
    ||||||||||| |||||||||||||||||||||||||||||||||            ||| ||||||||| ||||||||||||  |||||||||||| ||    
T  18441694 aatctctcctctagagtaggtcaagtttggaccgaactgggtgaacaatctctttggtgtctttgttttcctcttccctctcc--gtttatcttgtgctt 18441597  T
Q  89 gtgctttgtgtttca----cacttgtttcctagattagatctaggtggtgttttgttgtttgttgcttgcacaatacactttgtttggtggttaccactc 184  Q
    |||  ||||||||      ||||| |||||||||||||||||||||| |||||||||| || ||||||||||   |||||||| ||||||||||| |||     
T  18441596 gtgtattgtgtttttttttcacttctttcctagattagatctaggtgctgttttgttgattattgcttgcac---acactttg-ttggtggttactactt 18441501  T
Q  185 tccttggctccacacatcattattttgtattggtgtggtt 224  Q
    ||||| |||||||||||| ||| |||||||||||||||||    
T  18441500 tcctttgctccacacatc-ttactttgtattggtgtggtt 18441462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 16409597 - 16409824
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa------------tgtatttgttttcttcttccctctccttgtttatcttgtgatt 88  Q
    |||||||||||||||||||||||||||||||||||||||||||||            ||| ||||||||| ||||||||||||||  |||||||||| ||    
T  16409597 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttggtgtctttgttttcctcttccctctcctt--ttatcttgtgctt 16409694  T
Q  89 gtgctttgtgtttcacactt-gtttcctagattagatctaggtggtgtt-ttgttgtttgttgcttgcacaatacactttgtttggtggttaccactctc 186  Q
    ||| ||| || ||  ||||| ||||||||||||||||||||||| |||| |||||| || ||||||||||    ||||||| || |||||||| ||| ||    
T  16409695 gtgttttatgcttttcactttgtttcctagattagatctaggtgttgttattgttgattattgcttgcac---ccactttg-ttagtggttactactttc 16409790  T
Q  187 cttggctccacacatcattattttgtattggtgtg 221  Q
    ||| ||||||||||||| || ||||||||||||||    
T  16409791 ctttgctccacacatca-tactttgtattggtgtg 16409824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 26178004 - 26178234
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa------------tgtatttgttttcttcttccctctccttgtttatcttgtgatt 88  Q
    |||||||||||||||||||||||||||||||||||||||||||||            ||| ||||||||| |||||||||||||  ||||||||||| ||    
T  26178004 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttggtgtctttgttttcctcttccctctcct--tttatcttgtgctt 26178101  T
Q  89 gtgctttgtgtttcacac-ttgtttcctagattagatctaggtggtgtt-ttgttgtttgttgcttgcacaatacactttgtttggtggttaccactctc 186  Q
    ||| ||| || ||  ||| ||| ||||||||||||||||||||| |||| |  ||| || ||||||||||   |||||||| || |||||||| ||| ||    
T  26178102 gtgttttatgcttttcactttgattcctagattagatctaggtgttgttatcattgattattgcttgcac---acactttg-ttagtggttactactttc 26178197  T
Q  187 cttggctccacacatcattattttgtattggtgtggtt 224  Q
    ||| |||||||||||| ||| || ||||||||||||||    
T  26178198 ctttgctccacacatc-ttacttcgtattggtgtggtt 26178234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 26170884 - 26171114
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa------------tgtatttgttttcttcttccctctccttgtttatcttgtgatt 88  Q
    |||||||||||||||||||||||||||||||||||||||||||||            ||| ||||||||| |||||||||||||  ||||||||||| ||    
T  26170884 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttggtgtctttgttttcctcttccctctcct--tttatcttgtgctt 26170981  T
Q  89 gtgctttgtgtttcaca-cttgtttcctagattagatctaggtggtgtt-ttgttgtttgttgcttgcacaatacactttgtttggtggttaccactctc 186  Q
    ||| ||| || ||  ||  ||| ||||||||||||||||||||| |||| |  | | || ||||||||||   |||||||| || ||| |||| ||| ||    
T  26170982 gtgttttatgcttttcattttgattcctagattagatctaggtgttgttatcatcgattattgcttgcac---acactttg-ttagtgcttactactttc 26171077  T
Q  187 cttggctccacacatcattattttgtattggtgtggtt 224  Q
    ||| |||||||||||| ||| || ||||||||||||||    
T  26171078 ctttgctccacacatc-ttacttcgtattggtgtggtt 26171114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 37439263 - 37439307
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  37439263 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 37439307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 213587 - 213631
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    ||||||||||||| |||||||||||||||||||||||||||||||    
T  213587 aatctctcctccatagtaggtcaagtttggaccgaactgggtgaa 213631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 13239873 - 13239917
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  13239873 aatctctcctccagagtaggtcaaatttggaccgaactgggtgaa 13239917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 13343182 - 13343226
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    ||||||||||||||||||||||| |||||||||||||||||||||    
T  13343182 aatctctcctccagagtaggtcatgtttggaccgaactgggtgaa 13343226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 25412882 - 25412926
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    |||||||||||||||||||||||||||||||| ||||||||||||    
T  25412882 aatctctcctccagagtaggtcaagtttggactgaactgggtgaa 25412926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 30182710 - 30182933
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa----------tgtatttgttttcttcttccctctccttgtttatcttgtgattgt 90  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||          ||| |||||||   ||||  |||||||  ||||||||||| ||||    
T  30182710 aatctctcctccagagtatgtcaagtttggaccgaactggatgaacaatctttggtgtgtttgtttctctctt--ctctcct--tttatcttgtgcttgt 30182805  T
Q  91 gctttgtgtttcacac-ttgtttcctagattagatctaggtggtgtt-ttgttgtttgttgcttgcacaatacactttgtttggtggttaccactctcct 188  Q
    | |||||| ||  ||| ||||||||||||||||||||||||| |||| |||||| || ||| ||||   || ||||||| ||  ||||||| ||| ||||    
T  30182806 gttttgtgcttttcactttgtttcctagattagatctaggtgttgttattgttgattattgtttgc---attcactttg-ttattggttactactttcct 30182901  T
Q  189 tggctccacacatcattattttgtattggtgtg 221  Q
    | ||||||||||||| || ||||| ||||||||    
T  30182902 ttgctccacacatca-tagtttgttttggtgtg 30182933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 28278438 - 28278481
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    ||||||||||||||||||||||||| |||||||||||||||||||    
T  28278438 aatctctcctccagagtaggtcaag-ttggaccgaactgggtgaa 28278481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 36074089 - 36074045
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||    
T  36074089 aatctctcctccaaagtaggtcaagtttggaccgaactggatgaa 36074045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 40147383 - 40147426
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    ||||||||||||||||||||||||| |||||||||||||||||||    
T  40147383 aatctctcctccagagtaggtcaag-ttggaccgaactgggtgaa 40147426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 5058167 - 5058210
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    ||||||||||| ||||||||||||| |||||||||||||||||||    
T  5058167 aatctctcctctagagtaggtcaag-ttggaccgaactgggtgaa 5058210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 16452202 - 16452242
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggt 42  Q
    ||||||||| ||||||||||||||| ||||||||||||||||    
T  16452202 aatctctcccccagagtaggtcaag-ttggaccgaactgggt 16452242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 27637659 - 27637614
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaat 46  Q
    |||||||||| ||||||||||||   ||||||||||||||||||||    
T  27637659 aatctctcctgcagagtaggtcattgttggaccgaactgggtgaat 27637614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 27015645 - 27015688
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    ||||||||||||| | ||||||||| |||||||||||||||||||    
T  27015645 aatctctcctccaaaataggtcaag-ttggaccgaactgggtgaa 27015688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 181; Significance: 1e-97; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 1 - 256
Target Start/End: Original strand, 9036538 - 9036801
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa-----------tgtatttgttttcttcttccctctccttgtttatcttgtgattg 89  Q
    ||||||||||| |||||||||||||||||||||||||||||||||           ||||||||||||||||||||||||||||||||||||||||||||    
T  9036538 aatctctcctcgagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtatttgttttcttcttccctctccttgtttatcttgtgattg 9036637  T
Q  90 tgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttgcttgcacaatacactttgtttggtggttaccactctcctt 189  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  9036638 tgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttgcttgcacaa-acactttgtttggtggttaccactctcctt 9036736  T
Q  190 ggctccacacatcattattttgtattggtgtggttcgatcttgtgggggatcggaattcacaacagg 256  Q
     ||||||||||||| |  |||| |||||||||||||||||| || ||||||||||||||||||||||    
T  9036737 agctccacacatca-tcctttgcattggtgtggttcgatctagt-ggggatcggaattcacaacagg 9036801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 44203754 - 44203995
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa-----------tgtat-ttgttttcttcttccctctccttgtttatcttgtgatt 88  Q
    |||||||||||||||||||||||||||||||||||||||||||||           ||| | |||||||||||||||||||||||||  |||||||||||    
T  44203754 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttgtgtttattgttttcttcttccctctccttgt--atcttgtgatt 44203851  T
Q  89 gt-gctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttgcttgcacaatacactttgtttggtggttaccactctcc 187  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  44203852 gttgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaataaactttgtttggtggttaccactctcc 44203951  T
Q  188 ttggctccacacatcattat--tttgtattggtgtggttcgatc 229  Q
     | |||||||||||||||||  ||||||||||||||||||||||    
T  44203952 gtcgctccacacatcattattctttgtattggtgtggttcgatc 44203995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 4 - 228
Target Start/End: Original strand, 21054083 - 21054314
Alignment:
Q  4 ctctcctccagagtaggtcaagtttggaccgaactgggtgaa-----------tgtatttgttttcttcttccctctccttgtttatcttgtgattgtgc 92  Q
    |||||||||||||||||||||||||||||||||||||||||            ||||||||||||||||||||||||||||  ||||||||||||||||     
T  21054083 ctctcctccagagtaggtcaagtttggaccgaactgggtgaccaatctcttggtgtatttgttttcttcttccctctcctt--ttatcttgtgattgtgt 21054180  T
Q  93 tttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttgcttgcacaatacactttgtttggtggttaccactctccttggc 192  Q
     ||||||||| ||||||||||||||||||||||||||||||||||||||| || ||||||||||   |||||| ||||||||||||||||||||||| ||    
T  21054181 attgtgtttctcacttgtttcctagattagatctaggtggtgttttgttgattattgcttgcac---acacttagtttggtggttaccactctcctttgc 21054277  T
Q  193 tccacacatcat-tattttgtattggtgtggttcgat 228  Q
    |||||||||||| | | ||||||||||||||||||||    
T  21054278 tccacacatcatatttcttgtattggtgtggttcgat 21054314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 40282499 - 40282730
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa-----------tgtatttgttttcttcttccctctccttgtttatcttgtgattg 89  Q
    |||||||||||||||||||||||||||||||||||||||||||||           ||| ||||||||||||||||||||||||  ||||||||||||||    
T  40282499 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtctttgttttcttcttccctctcctt--ttatcttgtgattg 40282596  T
Q  90 tgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttgcttgcacaatacactttg-tttggtggttaccactctcct 188  Q
    ||  ||||||||| ||||||||||||||||||||||||||||||||||||||| || |||||||||| | |||||||| |||||||||||||||||||||    
T  40282597 tgtattgtgtttctcacttgtttcctagattagatctaggtggtgttttgttgattattgcttgcac-acacactttgttttggtggttaccactctcct 40282695  T
Q  189 tggctccacacatcattattttgtattggtgtggtt 224  Q
    | ||||||||||||| || |||| ||||||||||||    
T  40282696 ttgctccacacatca-tagtttgcattggtgtggtt 40282730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 9987323 - 9987558
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa-----------tgtattt-gttttcttcttccctctccttgtttatcttgtgatt 88  Q
    |||||||||||||||||||||||||||||||||||||||||||||           ||| ||| |||||||||||||||||||||  |||||||||||||    
T  9987323 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtcttttgttttcttcttccctctcctt--ttatcttgtgatt 9987420  T
Q  89 gtgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttgcttgcacaatacactttgtttggtggttaccactctcct 188  Q
    |||  | ||||||| ||||||||||||||||||||||||||||||||||||||| || ||||||||||   |||||||| ||||||||||||||||||||    
T  9987421 gtgtatagtgtttctcacttgtttcctagattagatctaggtggtgttttgttgattattgcttgcac---acactttgattggtggttaccactctcct 9987517  T
Q  189 tggctccacacatcat-tattttgtattggtgtggttcgat 228  Q
    | |||||||||||||| | ||| ||||||||||||||||||    
T  9987518 ttgctccacacatcatatttttcgtattggtgtggttcgat 9987558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 20622283 - 20622072
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa-----------tgtatttgttttcttcttccctctccttgtttatcttgtgattg 89  Q
    |||||||||||||||||||||||||||||||||||||||||||||           ||| ||||||||||||||||||||||||  ||||||||||||||    
T  20622283 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtctttgttttcttcttccctctcctt--ttatcttgtgattg 20622186  T
Q  90 tgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttgcttgcacaatacactttgtttggtggttaccactctcctt 189  Q
    ||  ||||||||| ||||||||||||||||||||||||||||||||||||||| || |||||||||| | |||||||||||||||||||| ||| |||||    
T  20622185 tgtattgtgtttctcacttgtttcctagattagatctaggtggtgttttgttgattattgcttgcac-acacactttgtttggtggttactactttcctt 20622087  T
Q  190 ggctccacacatcat 204  Q
     ||||||||||||||    
T  20622086 tgctccacacatcat 20622072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 51765519 - 51765747
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa----------tgtatttgttttcttcttccctctccttgtttatcttgtgattgt 90  Q
    |||||||||||||||||||| ||||||||||||||||||||||||          ||| ||||||||| ||||||||||||||  |||||||||| ||||    
T  51765519 aatctctcctccagagtaggacaagtttggaccgaactgggtgaacaatctttggtgtctttgttttcctcttccctctcctt--ttatcttgtgcttgt 51765616  T
Q  91 gctttgtgtttcacactt-gtttcctagattagatctaggtggtgtt-ttgttgtttgttgcttgcacaatacactttgtttggtggttaccactctcct 188  Q
    | |||||| ||  ||||| ||||||||||||||||||||||| |||| |||||| || ||||||||||    ||| ||  || |||||||| ||| ||||    
T  51765617 ggtttgtgcttttcactttgtttcctagattagatctaggtgttgttattgttgattattgcttgcac---tcac-ttaattagtggttactactttcct 51765712  T
Q  189 tggctccacacatcattattttgtattggtgtggtt 224  Q
    | ||||||||||||| ||||| ||||||||||||||    
T  51765713 ttgctccacacatca-tatttcgtattggtgtggtt 51765747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 8550833 - 8550789
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  8550833 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 8550789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 13316398 - 13316354
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  13316398 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 13316354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 3189452 - 3189496
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    |||||||| ||||||||||||||||||||||||||||||||||||    
T  3189452 aatctctcatccagagtaggtcaagtttggaccgaactgggtgaa 3189496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 3198269 - 3198313
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    |||||||| ||||||||||||||||||||||||||||||||||||    
T  3198269 aatctctcatccagagtaggtcaagtttggaccgaactgggtgaa 3198313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 3207108 - 3207152
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    |||||||| ||||||||||||||||||||||||||||||||||||    
T  3207108 aatctctcatccagagtaggtcaagtttggaccgaactgggtgaa 3207152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 29136369 - 29136413
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    |||||||||||||||||||||||||||||||||||||| ||||||    
T  29136369 aatctctcctccagagtaggtcaagtttggaccgaactaggtgaa 29136413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 13547135 - 13547092
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    ||||||||||||||||||||||||| |||||||||||||||||||    
T  13547135 aatctctcctccagagtaggtcaag-ttggaccgaactgggtgaa 13547092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 13549046 - 13549003
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    ||||||||||||||||||||||||| |||||||||||||||||||    
T  13549046 aatctctcctccagagtaggtcaag-ttggaccgaactgggtgaa 13549003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 37168420 - 37168463
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    ||||||||||||||||||||||||| |||||||||||||||||||    
T  37168420 aatctctcctccagagtaggtcaag-ttggaccgaactgggtgaa 37168463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 42298021 - 42297977
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    ||||||||||||||||||||||| | |||||||||||||||||||    
T  42298021 aatctctcctccagagtaggtcatggttggaccgaactgggtgaa 42297977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 20762794 - 20762837
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtga 44  Q
    |||||||||| ||||||||||||||||||||||||||| |||||    
T  20762794 aatctctcctacagagtaggtcaagtttggaccgaactaggtga 20762837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 11348820 - 11348863
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||    
T  11348820 aatctctcctccagagtaggtcaag-ttggaccgaactgagtgaa 11348863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 28242426 - 28242470
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    |||||||||||||||||||||||   |||||||||||||||||||    
T  28242426 aatctctcctccagagtaggtcattgttggaccgaactgggtgaa 28242470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 47255386 - 47255342
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    |||||||||||||||||||||||   |||||||||||||||||||    
T  47255386 aatctctcctccagagtaggtcattgttggaccgaactgggtgaa 47255342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 34603699 - 34603740
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtg 43  Q
    ||||||||||||||||||||||||| |||||||||||| ||||    
T  34603699 aatctctcctccagagtaggtcaag-ttggaccgaactaggtg 34603740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 193733 - 193776
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    ||||||| |||||||||| |||||||| |||||||||||||||||    
T  193733 aatctcttctccagagtatgtcaagtt-ggaccgaactgggtgaa 193776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 42
Target Start/End: Complemental strand, 834212 - 834173
Alignment:
Q  2 atctctcctccagagtaggtcaagtttggaccgaactgggt 42  Q
    |||||||| ||||||||||||||| ||||||||||||||||    
T  834212 atctctcccccagagtaggtcaag-ttggaccgaactgggt 834173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 7482276 - 7482233
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    |||||||||| |||||||||||||| |||||||||||| ||||||    
T  7482276 aatctctccttcagagtaggtcaag-ttggaccgaactaggtgaa 7482233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 31925753 - 31925710
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    ||||||||||| ||||||||||||| |||||||||||| ||||||    
T  31925753 aatctctcctctagagtaggtcaag-ttggaccgaactaggtgaa 31925710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 37033118 - 37033074
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    ||||||| ||||| ||||||||| | |||||||||||||||||||    
T  37033118 aatctcttctccatagtaggtcatggttggaccgaactgggtgaa 37033074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 47115294 - 47115338
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    ||||||| |||||||||||||||   |||||||||||||||||||    
T  47115294 aatctctgctccagagtaggtcattgttggaccgaactgggtgaa 47115338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 150; Significance: 4e-79; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 1560712 - 1560470
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa-----------tgtatttgttttcttcttccctctccttgtttatcttgtgattg 89  Q
    |||||||||||||||||||||||||||||||||||||||||| |            ||||||||||||||||||||||||||||||||||||||||||||    
T  1560712 aatctctcctccagagtaggtcaagtttggaccgaactgggtaaccaatctcttggtgtatttgttttcttcttccctctccttgtttatcttgtgattg 1560613  T
Q  90 t-gctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttgcttgcacaatacactttgtttggtggttaccactctcct 188  Q
    | ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| ||| |||| |||||||||||||||||     
T  1560612 ttgctttgtgtttcacacttggttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaatatactctgttcggtggttaccactctccg 1560513  T
Q  189 tggctccacacatcattat--tttgtattggtgtggttcgatc 229  Q
    | |||||||||||||||||  ||||||||||||||||||||||    
T  1560512 tcgctccacacatcattattctttgtattggtgtggttcgatc 1560470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 4 - 229
Target Start/End: Complemental strand, 6594601 - 6594363
Alignment:
Q  4 ctctcctccagagtaggtcaagtttggaccgaactgggtgaa-----------tgtat-ttgttttcttcttccctctccttgtttatcttgtgattgt- 90  Q
    ||||||||||||||||||||||||||||||||||||||||||           ||| | ||||||||||||||||||  ||||||||||||||||||||     
T  6594601 ctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttgtgtttattgttttcttcttccctc--cttgtttatcttgtgattgtt 6594504  T
Q  91 gctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttgcttgcacaatacactttgtttggtggttaccactctccttg 190  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| |     
T  6594503 gctttgtgtttcacacttggttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaataaactttgtttggtggttaccactctccgtc 6594404  T
Q  191 gctccacacatcattat--tttgtattggtgtggttcgatc 229  Q
    |||||||||||||||||  ||||||||||||||||||||||    
T  6594403 gctccacacatcattattctttgtattggtgtggttcgatc 6594363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 18388806 - 18388565
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa-----------tgtat-ttgttttcttcttccctctccttgtttatcttgtgatt 88  Q
    |||||||||||||||||||||||||||||||||||||||||||||           ||| | |||||||||||||||||||| ||||  |||||||||||    
T  18388806 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttgtgtttattgttttcttcttccctctctttgt--atcttgtgatt 18388709  T
Q  89 gt-gctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttgcttgcacaatacactttgtttggtggttaccactctcc 187  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| |||||||||||||||||    
T  18388708 gttgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaataaactttgttcggtggttaccactctcc 18388609  T
Q  188 ttggctccacacatcattat--tttgtattggtgtggttcgatc 229  Q
     | |||||||||||||||||  ||||||||||||||||||||||    
T  18388608 gtcgctccacacatcattattctttgtattggtgtggttcgatc 18388565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 18392242 - 18392001
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa-----------tgtat-ttgttttcttcttccctctccttgtttatcttgtgatt 88  Q
    |||||||||||||||||||||||||||||||||||||||||||||           ||| | |||||||||||||||||||||||||  |||||||||||    
T  18392242 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttgtgtttattgttttcttcttccctctccttgt--atcttgtgatt 18392145  T
Q  89 gt-gctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttgcttgcacaatacactttgtttggtggttaccactctcc 187  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||     
T  18392144 gttgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaataaactttgttcggtggttaccactctct 18392045  T
Q  188 ttggctccacacatcattat--tttgtattggtgtggttcgatc 229  Q
     | |||||||||||||||||  ||||||||||||||||||||||    
T  18392044 gtcgctccacacatcattattctttgtattggtgtggttcgatc 18392001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 4 - 229
Target Start/End: Complemental strand, 6592383 - 6592145
Alignment:
Q  4 ctctcctccagagtaggtcaagtttggaccgaactgggtgaa-----------tgtat-ttgttttcttcttccctctccttgtttatcttgtgattgt- 90  Q
    ||||||||||||||||||||||||||||||||||||||||||           ||| | ||||||||||||||||||  ||||||| ||||||||||||     
T  6592383 ctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttgtgtttattgttttcttcttccctc--cttgtttttcttgtgattgtt 6592286  T
Q  91 gctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttgcttgcacaatacactttgtttggtggttaccactctccttg 190  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| |     
T  6592285 gctttgtgtttcacacttggttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaataaactttgtttggtggttaccactctccgtc 6592186  T
Q  191 gctccacacatcattat--tttgtattggtgtggttcgatc 229  Q
    |||||||||||||||||  ||||||||||||||||||||||    
T  6592185 gctccacacatcattattctttgtattggtgtggttcgatc 6592145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 32060368 - 32060127
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa-----------tgtat-ttgttttcttcttccctctccttgtttatcttgtgatt 88  Q
    |||||||||||||||||||||||||||||||||||||| ||||||           ||| | ||||||||||||||||||  ||||||||||||||||||    
T  32060368 aatctctcctccagagtaggtcaagtttggaccgaacttggtgaacaatctctttgtgtttattgttttcttcttccctc--cttgtttatcttgtgatt 32060271  T
Q  89 gt-gctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttgcttgcacaatacactttgtttggtggttaccactctcc 187  Q
    || ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| |||||||||||||||||    
T  32060270 gttgctttgtgtttcacacttggttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaataaactttgttcggtggttaccactctcc 32060171  T
Q  188 ttggctccacacatcattat--tttgtattggtgtggttcgatc 229  Q
     | |||||||||||||||||  ||| ||||||||||||||||||    
T  32060170 gtcgctccacacatcattattctttatattggtgtggttcgatc 32060127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 20344019 - 20344256
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa------------tgtatttgttttcttcttccctctccttgtttatcttgtgatt 88  Q
    ||||||||||||||||||||||||||| |||||||||||||||||            ||  ||||||||||||||||||||||||  |||||||||||||    
T  20344019 aatctctcctccagagtaggtcaagtt-ggaccgaactgggtgaacaatctctttggtgcttttgttttcttcttccctctcctt--ttatcttgtgatt 20344115  T
Q  89 gtgctttgtgtttcacacttgtttcctagattagatctagg---tggtgttttgttgtttgttgcttgcacaatacactttgtttggtggttaccactct 185  Q
    ||| |||||||||| ||||||||||||||||||||||||||   |||| |||||| | |||||||||||||   ||||||||||||||||||||||||||    
T  20344116 gtgttttgtgtttctcacttgtttcctagattagatctaggtgctggttttttgtcgattgttgcttgcac---acactttgtttggtggttaccactct 20344212  T
Q  186 ccttggctccacacatcattattttgtattggtgtggttcgatct 230  Q
    |||| |||||||||||||||  |||| ||||||||||||||||||    
T  20344213 cctttgctccacacatcatt-ctttgcattggtgtggttcgatct 20344256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 43504200 - 43503975
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa-----------tgtatttgttttcttcttccctctccttgtttatcttgtgattg 89  Q
    ||||||||||||| ||||||||||||||||| |||||||||||||           ||| ||||||||| ||||||||||||||  |||||||||| |||    
T  43504200 aatctctcctccatagtaggtcaagtttggatcgaactgggtgaacaatctcttggtgtctttgttttcctcttccctctcctt--ttatcttgtgcttg 43504103  T
Q  90 tgctttgtgtttcacactt-gtttcctagattagatctaggtggtgttttgttgtttgttgcttgcacaatacactttgtttggtggttaccactctcct 188  Q
    || ||| || ||  ||||| | |||||||||||||||||| || |  ||||||| || |||||||||||  |||||||||| ||||||||||||||||||    
T  43504102 tgttttatgcttttcactttgattcctagattagatctagctgtt--tttgttgattattgcttgcacac-acactttgtt-ggtggttaccactctcct 43504007  T
Q  189 tggctccacacatcattattttgtattggtgtg 221  Q
    | ||||||||||||| ||||| |||||||||||    
T  43504006 ttgctccacacatca-tatttcgtattggtgtg 43503975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 39731491 - 39731656
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa----------tgtatttgttttcttcttccctctccttgtttatcttgtgattgt 90  Q
    |||||||||||||||||||||||||||||||||||||||||||||          ||| ||||||||| ||||||||||||||  |||||||||| ||||    
T  39731491 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctttggtgtctttgttttcctcttccctctcctt--ttatcttgtgcttgt 39731588  T
Q  91 gctttgtgtttcacactt-gtttcctagattagatctaggtggtgtt-ttgttgtttgttgcttgcac 156  Q
    | |||||| ||  ||||| ||||||||||||||||||||||| |||| |||||| || ||||||||||    
T  39731589 ggtttgtgcttttcactttgtttcctagattagatctaggtgttgttattgttgattattgcttgcac 39731656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 98 - 221
Target Start/End: Original strand, 24790230 - 24790349
Alignment:
Q  98 gtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttgcttgcacaatacactttgtttggtggttaccactctccttggctccac 197  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||| || || |||||||    ||||||||||||||||||||||| ||| | |||||||    
T  24790230 gtttctcacctgtttcctagattagatctaggtggtgttttgttgattattacttgcac---gcactttgtttggtggttaccactttccgttgctccac 24790326  T
Q  198 acatcattattttgtattggtgtg 221  Q
    |||||| || |||| |||||||||    
T  24790327 acatca-tactttgcattggtgtg 24790349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 2 - 102
Target Start/End: Original strand, 24789964 - 24790074
Alignment:
Q  2 atctctcctccagagtaggtcaagtttggaccgaactgggtgaa-----------tgtatttg-ttttcttcttccctctccttgtttatcttgtgattg 89  Q
    ||||||||||||||||||||||||||||||||||||||||||||           ||| |||| |||||||||||||||||||  |||||||||||||||    
T  24789964 atctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtctttgtttttcttcttccctctcct--tttatcttgtgattg 24790061  T
Q  90 tgctttgtgtttc 102  Q
    ||| |||||||||    
T  24790062 tgcattgtgtttc 24790074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 23555162 - 23555206
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  23555162 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 23555206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 29991175 - 29991219
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  29991175 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 29991219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 34310762 - 34310718
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  34310762 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 34310718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 35854036 - 35854080
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  35854036 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 35854080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 25615975 - 25616015
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactggg 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  25615975 aatctctcctccagagtaggtcaagtttggaccgaactggg 25616015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 25767006 - 25766962
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    |||||||||||||||||||||||||||| ||||||||||||||||    
T  25767006 aatctctcctccagagtaggtcaagtttagaccgaactgggtgaa 25766962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 22270095 - 22270138
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    ||||||||||||||||||||||||| |||||||||||||||||||    
T  22270095 aatctctcctccagagtaggtcaag-ttggaccgaactgggtgaa 22270138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 32358100 - 32358057
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    ||||||||||||||||||||||||| |||||||||||||||||||    
T  32358100 aatctctcctccagagtaggtcaag-ttggaccgaactgggtgaa 32358057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 48408926 - 48408970
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||    
T  48408926 aatctctcctccagagtatgtcaagtttagaccgaactgggtgaa 48408970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 2390404 - 2390448
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaat 46  Q
    ||||||||||||||||||||||||| |||||||||||| |||||||    
T  2390404 aatctctcctccagagtaggtcaag-ttggaccgaactaggtgaat 2390448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 3259117 - 3259160
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||    
T  3259117 aatctctcctccagagtaggtcaag-ttgaaccgaactgggtgaa 3259160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 8359362 - 8359318
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    |||||||||||||||||||||||   |||||||||||||||||||    
T  8359362 aatctctcctccagagtaggtcattgttggaccgaactgggtgaa 8359318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 19502300 - 19502344
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    |||||||||||||||||| |||||||||||| |||| ||||||||    
T  19502300 aatctctcctccagagtaagtcaagtttggaacgaagtgggtgaa 19502344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 6432093 - 6432134
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtg 43  Q
    |||||||||| |||||||||||||| |||||||||||||||||    
T  6432093 aatctctccttcagagtaggtcaag-ttggaccgaactgggtg 6432134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 29608859 - 29608903
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaat 46  Q
    |||| |||||||||||||||||||| ||||||||||||| ||||||    
T  29608859 aatcactcctccagagtaggtcaag-ttggaccgaactgagtgaat 29608903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 4178895 - 4178939
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    |||||||||||||||| |||||||||||| ||| |||| ||||||    
T  4178895 aatctctcctccagagcaggtcaagtttgaaccaaactaggtgaa 4178939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 48599380 - 48599337
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    |||||||||||||||| || ||||||| |||||||||||||||||    
T  48599380 aatctctcctccagagcagatcaagtt-ggaccgaactgggtgaa 48599337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 150; Significance: 4e-79; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 25637549 - 25637793
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa------------tgtatttgttttcttcttccctctccttgtttatcttgtgatt 88  Q
    ||||||||||||||||||||||||||||||||||||||||||||             ||  |||||||||||||||||||||||||||||||||||||||    
T  25637549 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaccaatctctttggtgcttttgttttcttcttccctctccttgtttatcttgtgatt 25637648  T
Q  89 gt--gctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttgcttgcacaatacactttgtttggtggttaccactctc 186  Q
    ||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||||||||||||||||    
T  25637649 gtttgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcctgcttgcacaatacactttgttaggtggttaccactctc 25637748  T
Q  187 cttggctccacacatcattat--tttgtattggtgtggttcgatc 229  Q
    | | |||||||||||||||||  ||||||||||||||||||||||    
T  25637749 cgtcgctccacacatcattattctttgtattggtgtggttcgatc 25637793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 3617572 - 3617813
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa-----------tgtat-ttgttttcttcttccctctccttgtttatcttgtgatt 88  Q
    |||||||||||||||||||||||||||||||||||||||||||||           ||| | |||||||||||||||||||||||||  |||||||||||    
T  3617572 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttgtgtttattgttttcttcttccctctccttgt--atcttgtgatt 3617669  T
Q  89 gt-gctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttgcttgcacaatacactttgtttggtggttaccactctcc 187  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| |||||||||||||||||    
T  3617670 gttgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaataaactttgttcggtggttaccactctcc 3617769  T
Q  188 ttggctccacacatcattat--tttgtattggtgtggttcgatc 229  Q
     | ||||||||||||||| |  ||||||||||||||||||||||    
T  3617770 gtcgctccacacatcattcttatttgtattggtgtggttcgatc 3617813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 45283108 - 45283346
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa-----------tgtatttgttttcttcttccctctccttgtttatcttgtgattg 89  Q
    ||||||||||||||||||||||||||||||||||||||| |||||           ||  ||||||||||||||||||||||||||||||||||||||||    
T  45283108 aatctctcctccagagtaggtcaagtttggaccgaactgagtgaacaatctcttggtgcttttgttttcttcttccctctccttgtttatcttgtgattg 45283207  T
Q  90 tgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttgcttgcacaatacactttgtttggtggttaccactctcctt 189  Q
    ||  ||||||||| |||| |||||||||||||||||||||||||||||||||| || |||||||||||| ||||||||||||||||||||| |||||| |    
T  45283208 tgtattgtgtttctcactagtttcctagattagatctaggtggtgttttgttgattattgcttgcacaa-acactttgtttggtggttaccgctctccgt 45283306  T
Q  190 ggctccacacatcattattttgtattggtgtggttcgatct 230  Q
     |||||||||||||||  |||||||||||||||||||||||    
T  45283307 cgctccacacatcatt-ctttgtattggtgtggttcgatct 45283346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 4 - 230
Target Start/End: Original strand, 54635249 - 54635484
Alignment:
Q  4 ctctcctccagagtaggtcaagtttggaccgaactgggtgaa------------tgtatttgttttcttcttccctctccttgtttatcttgtgattgtg 91  Q
    ||||||||||||||||||||||||||||||||||||||||||            ||  ||||||||||||||||||||||||  ||||||||||||||||    
T  54635249 ctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttggtgcttttgttttcttcttccctctcctt--ttatcttgtgattgtg 54635346  T
Q  92 ctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttgcttgcacaatacactttgtttggtggttaccactctccttgg 191  Q
      ||||||||| ||||||||||||||||||||||||||||||||||||||| || |||||||||| | |||||||||||||||||||||||||||||| |    
T  54635347 tattgtgtttctcacttgtttcctagattagatctaggtggtgttttgttgattattgcttgcac-acacactttgtttggtggttaccactctcctttg 54635445  T
Q  192 ctccacacatcattattttgtattggtgtggttcgatct 230  Q
    |||||||||||||||||| |||||||||||  |||||||    
T  54635446 ctccacacatcattatttagtattggtgtgactcgatct 54635484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 4 - 229
Target Start/End: Complemental strand, 4598566 - 4598328
Alignment:
Q  4 ctctcctccagagtaggtcaagtttggaccgaactgggtgaa-----------tgtat-ttgttttcttcttccctctccttgtttatcttgtgattgt- 90  Q
    |||||||||||||||||||||||||||||||||||||||||            ||| | ||||||||||||||||||||||||||||||||||||||||     
T  4598566 ctctcctccagagtaggtcaagtttggaccgaactgggtgaccaatctctttgtgtttattgttttcttcttccctctccttgtttatcttgtgattgtt 4598467  T
Q  91 gctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttgcttgcacaatacactttgtttggtggttaccactctccttg 190  Q
    |||||||  ||||||||||||||||||||| ||||||||||||||||| |||||| |||||||| |||||  ||||||||||||||||||||||||| |     
T  4598466 gctttgt--ttcacacttgtttcctagattggatctaggtggtgttttattgtttcttgcttgctcaataagctttgtttggtggttaccactctccgtc 4598369  T
Q  191 gctccacacatcattat--tttgtattggtgtggttcgatc 229  Q
    |||||||||||||||||  ||||||||||||||||||||||    
T  4598368 gctccacacatcattattctttgtattggtgtggttcgatc 4598328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 4 - 229
Target Start/End: Complemental strand, 4600787 - 4600549
Alignment:
Q  4 ctctcctccagagtaggtcaagtttggaccgaactgggtgaa-----------tgtat-ttgttttcttcttccctctccttgtttatcttgtgattgtg 91  Q
    |||||||| ||||||||||||||||||||||||||||||||            ||| | ||||||||||||||||||||||||||||||||||||||||     
T  4600787 ctctcctctagagtaggtcaagtttggaccgaactgggtgaccaatctctttgtgtttattgttttcttcttccctctccttgtttatcttgtgattgtt 4600688  T
Q  92 ctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttgcttgcacaatacactttgtttggtggttaccactctccttgg 191  Q
      || |||||||||||||||||||||||| |||||||||||||||||||||||| | |||||| |||||  ||||||||||||||||||||||||| | |    
T  4600687 gatt-tgtttcacacttgtttcctagattggatctaggtggtgttttgttgtttctggcttgctcaataagctttgtttggtggttaccactctccgtcg 4600589  T
Q  192 ctccacacatcattat--tttgtattggtgtggttcgatc 229  Q
    ||||||||||||||||  ||||||||||||||||||||||    
T  4600588 ctccacacatcattattctttgtattggtgtggttcgatc 4600549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 4 - 229
Target Start/End: Original strand, 10211520 - 10211758
Alignment:
Q  4 ctctcctccagagtaggtcaagtttggaccgaactgggtgaa-----------tgtat-ttgttttcttcttccctctccttgtttatcttgtgattgt- 90  Q
    |||||||||||||||||||||||||||||||||||||||||            ||| | |||||||| |||||||||||||||||||||||||||||||     
T  10211520 ctctcctccagagtaggtcaagtttggaccgaactgggtgaccaatctctttgtgtttattgttttcatcttccctctccttgtttatcttgtgattgtt 10211619  T
Q  91 gctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttgcttgcacaatacactttgtttggtggttaccactctccttg 190  Q
    |||||||  ||||||||||||||||||||| |||||||||||||||||||||||| |||||||| |||||  ||||| ||||||||||||||||||| |     
T  10211620 gctttgt--ttcacacttgtttcctagattggatctaggtggtgttttgttgtttcttgcttgctcaataagctttgattggtggttaccactctccgtc 10211717  T
Q  191 gctccacacatcattat--tttgtattggtgtggttcgatc 229  Q
    |||||||||||||||||  | ||||||||||||||||||||    
T  10211718 gctccacacatcattattctctgtattggtgtggttcgatc 10211758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 4 - 229
Target Start/End: Original strand, 10209300 - 10209538
Alignment:
Q  4 ctctcctccagagtaggtcaagtttggaccgaactgggtgaa-----------tgtat-ttgttttcttcttccctctccttgtttatcttgtgattgt- 90  Q
    |||||||||||||||||||||||||||||| ||||||||||            ||| | |||||||| |||||||||||||||||||||||||||||||     
T  10209300 ctctcctccagagtaggtcaagtttggaccaaactgggtgaccaatctctttgtgtttattgttttcatcttccctctccttgtttatcttgtgattgtt 10209399  T
Q  91 gctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttgcttgcacaatacactttgtttggtggttaccactctccttg 190  Q
    |||||||  ||||||||||||||||||||| |||||||||||||||||||||||| |||||||| |||||  ||||| ||||||||||||||||||| |     
T  10209400 gctttgt--ttcacacttgtttcctagattggatctaggtggtgttttgttgtttcttgcttgctcaataagctttgattggtggttaccactctccgtc 10209497  T
Q  191 gctccacacatcattat--tttgtattggtgtggttcgatc 229  Q
     ||||||||||||||||  | ||||||||||||||||||||    
T  10209498 actccacacatcattattctctgtattggtgtggttcgatc 10209538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 4 - 229
Target Start/End: Original strand, 10056344 - 10056582
Alignment:
Q  4 ctctcctccagagtaggtcaagtttggaccgaactgggtgaa-----------tgtat-ttgttttcttcttccctctccttgtttatcttgtgatt--g 89  Q
    |||||||||||||||||||||||||||||||||||||||||            ||| | ||||||||||||||||||||||||||||||||||| ||       
T  10056344 ctctcctccagagtaggtcaagtttggaccgaactgggtgaccaatctctttgtgtttattgttttcttcttccctctccttgtttatcttgtgtttagt 10056443  T
Q  90 tgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttgcttgcacaatacactttgtttggtggttaccactctcctt 189  Q
    |||||  |||||||||||||||||||||||| ||||||||||||| |||||||||| |||||||| |||||  ||| ||||||||||||||||||||| |    
T  10056444 tgctt--tgtttcacacttgtttcctagattggatctaggtggtg-tttgttgtttcttgcttgctcaataagcttggtttggtggttaccactctccgt 10056540  T
Q  190 ggctccacacatcattat--tttgtattggtgtggttcgatc 229  Q
     |||||||||||||||||  ||||||||||||||||||||||    
T  10056541 cgctccacacatcattattctttgtattggtgtggttcgatc 10056582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 4 - 229
Target Start/End: Original strand, 10058566 - 10058804
Alignment:
Q  4 ctctcctccagagtaggtcaagtttggaccgaactgggtgaa-----------tgtat-ttgttttcttcttccctctccttgtttatcttgtgatt--g 89  Q
    |||||||||||||||||||||||||||||||||||||||||            ||| | ||||||||||||||||||||||||||||||||||| ||       
T  10058566 ctctcctccagagtaggtcaagtttggaccgaactgggtgaccaatctctttgtgtttattgttttcttcttccctctccttgtttatcttgtgtttagt 10058665  T
Q  90 tgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttgcttgcacaatacactttgtttggtggttaccactctcctt 189  Q
    |||||  |||||||||||||||||||||||| ||||||||||||| |||||||||| |||||||| |||||  ||| ||||||||||||||||||||| |    
T  10058666 tgctt--tgtttcacacttgtttcctagattggatctaggtggtg-tttgttgtttcttgcttgctcaataagcttggtttggtggttaccactctccgt 10058762  T
Q  190 ggctccacacatcattat--tttgtattggtgtggttcgatc 229  Q
     |||||||||||||||||  ||||||||||||||||||||||    
T  10058763 cgctccacacatcattattctttgtattggtgtggttcgatc 10058804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 4 - 229
Target Start/End: Original strand, 10060788 - 10061026
Alignment:
Q  4 ctctcctccagagtaggtcaagtttggaccgaactgggtgaa-----------tgtat-ttgttttcttcttccctctccttgtttatcttgtgatt--g 89  Q
    |||||||||||||||||||||||||||||||||||||||||            ||| | ||||||||||||||||||||||||||||||||||| ||       
T  10060788 ctctcctccagagtaggtcaagtttggaccgaactgggtgaccaatctctttgtgtttattgttttcttcttccctctccttgtttatcttgtgtttagt 10060887  T
Q  90 tgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttgcttgcacaatacactttgtttggtggttaccactctcctt 189  Q
    |||||  |||||||||||||||||||||||| ||||||||||||| |||||||||| |||||||| |||||  ||| ||||||||||||||||||||| |    
T  10060888 tgctt--tgtttcacacttgtttcctagattggatctaggtggtg-tttgttgtttcttgcttgctcaataagcttggtttggtggttaccactctccgt 10060984  T
Q  190 ggctccacacatcattat--tttgtattggtgtggttcgatc 229  Q
     |||||||||||||||||  ||||||||||||||||||||||    
T  10060985 cgctccacacatcattattctttgtattggtgtggttcgatc 10061026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 4 - 229
Target Start/End: Original strand, 10063010 - 10063248
Alignment:
Q  4 ctctcctccagagtaggtcaagtttggaccgaactgggtgaa-----------tgtat-ttgttttcttcttccctctccttgtttatcttgtgatt--g 89  Q
    |||||||||||||||||||||||||||||||||||||||||            ||| | ||||||||||||||||||||||||||||||||||| ||       
T  10063010 ctctcctccagagtaggtcaagtttggaccgaactgggtgaccaatctctttgtgtttattgttttcttcttccctctccttgtttatcttgtgtttagt 10063109  T
Q  90 tgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttgcttgcacaatacactttgtttggtggttaccactctcctt 189  Q
    |||||  |||||||||||||||||||||||| ||||||||||||| |||||||||| |||||||| |||||  ||| ||||||||||||||||||||| |    
T  10063110 tgctt--tgtttcacacttgtttcctagattggatctaggtggtg-tttgttgtttcttgcttgctcaataagcttggtttggtggttaccactctccgt 10063206  T
Q  190 ggctccacacatcattat--tttgtattggtgtggttcgatc 229  Q
     |||||||||||||||||  ||||||||||||||||||||||    
T  10063207 cgctccacacatcattattctttgtattggtgtggttcgatc 10063248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 4 - 229
Target Start/End: Original strand, 10065232 - 10065470
Alignment:
Q  4 ctctcctccagagtaggtcaagtttggaccgaactgggtgaa-----------tgtat-ttgttttcttcttccctctccttgtttatcttgtgatt--g 89  Q
    |||||||||||||||||||||||||||||||||||||||||            ||| | ||||||||||||||||||||||||||||||||||| ||       
T  10065232 ctctcctccagagtaggtcaagtttggaccgaactgggtgaccaatctctttgtgtttattgttttcttcttccctctccttgtttatcttgtgtttagt 10065331  T
Q  90 tgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttgcttgcacaatacactttgtttggtggttaccactctcctt 189  Q
    |||||  |||||||||||||||||||||||| ||||||||||||| |||||||||| |||||||| |||||  ||| ||||||||||||||||||||| |    
T  10065332 tgctt--tgtttcacacttgtttcctagattggatctaggtggtg-tttgttgtttcttgcttgctcaataagcttggtttggtggttaccactctccgt 10065428  T
Q  190 ggctccacacatcattat--tttgtattggtgtggttcgatc 229  Q
     |||||||||||||||||  ||||||||||||||||||||||    
T  10065429 cgctccacacatcattattctttgtattggtgtggttcgatc 10065470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 8 - 229
Target Start/End: Original strand, 10067435 - 10067669
Alignment:
Q  8 cctccagagtaggtcaagtttggaccgaactgggtgaa-----------tgtat-ttgttttcttcttccctctccttgtttatcttgtgatt--gtgct 93  Q
    |||||||||||||||||||||||||||||||||||||            ||| | ||||||||||||||||||||||||||||||||||| ||   ||||    
T  10067435 cctccagagtaggtcaagtttggaccgaactgggtgaccaatctctttgtgtttattgttttcttcttccctctccttgtttatcttgtgtttagttgct 10067534  T
Q  94 ttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttgcttgcacaatacactttgtttggtggttaccactctccttggct 193  Q
    |  |||||||||||||||||||||||| ||||||||||||| |||||||||| |||||||| |||||  ||| ||||||||||||||||||||| | |||    
T  10067535 t--tgtttcacacttgtttcctagattggatctaggtggtg-tttgttgtttcttgcttgctcaataagcttggtttggtggttaccactctccgtcgct 10067631  T
Q  194 ccacacatcattat--tttgtattggtgtggttcgatc 229  Q
    ||||||||||||||  ||||||||||||||||||||||    
T  10067632 ccacacatcattattctttgtattggtgtggttcgatc 10067669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 4 - 254
Target Start/End: Original strand, 6716624 - 6716881
Alignment:
Q  4 ctctcctccagagtaggtcaagtttggaccgaactgggtgaa------------tgtatttgttttcttcttccctctccttgtttatcttgtgattgtg 91  Q
    ||||||||||||||||||||||||||||||||||||||||||            ||  ||||||||||||||||||| ||||  |||||||||||||||     
T  6716624 ctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttggtgcttttgttttcttcttccctcccctt--ttatcttgtgattgta 6716721  T
Q  92 cttt-gtgtttcacacttgtttcctagattagatctaggtggtgtttt-gttgtttgttgcttgcacaatacactttgtttggtggttaccactctcctt 189  Q
     ||| | ||||||||||||||||||||||||||||||||||||||||| |||| || |||||||||| | ||||||||||||||||||||| || ||| |    
T  6716722 tttttgagtttcacacttgtttcctagattagatctaggtggtgttttggttgattattgcttgcac-acacactttgtttggtggttaccgctttccgt 6716820  T
Q  190 ggctccacacatcattattttgtattggtgtggttcgatcttgtgggggatcggaattcacaaca 254  Q
     ||||||||||||| |  |||| |||||||||||||||||   | || |||||||||||||||||    
T  6716821 tgctccacacatcact-ctttgcattggtgtggttcgatc---taggtgatcggaattcacaaca 6716881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 7780050 - 7779821
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa-----------tgtatttgttttcttcttccctctccttgtttatcttgtgattg 89  Q
    ||||||||||||||||||||||||||||||||| || ||||||||           ||| ||||||||| ||||||||||||||  |||||||||| |||    
T  7780050 aatctctcctccagagtaggtcaagtttggaccaaagtgggtgaacaatctcttggtgtctttgttttcctcttccctctcctt--ttatcttgtgcttg 7779953  T
Q  90 tgctttgtgtttca-cacttgtttcctagattagatctaggtggtg-ttttgttgtttgttgcttgcacaatacactttgtttggtggttaccactctcc 187  Q
    ||  ||||||||   |||||||||||||||||||||||||||| || |||||||| || ||||||||||   |||||||| |||||||||||||||||||    
T  7779952 tgtattgtgttttttcacttgtttcctagattagatctaggtgctgtttttgttgattattgcttgcac---acactttg-ttggtggttaccactctcc 7779857  T
Q  188 ttggctccacacatcattattttgtattggtgtggtt 224  Q
    || |||||||||||| ||| || ||||||||||||||    
T  7779856 tttgctccacacatc-ttacttcgtattggtgtggtt 7779821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 23200184 - 23199957
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa----------tgtatttgttttcttcttccctctccttgtttatcttgtgattgt 90  Q
    |||||||||||||||||||||||||||||||||||||||||||||          ||| ||||||||||||||||||||||||  ||||||| || ||||    
T  23200184 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctttggtgtctttgttttcttcttccctctcctt--ttatcttatgcttgt 23200087  T
Q  91 gctttgtgtttcacactt-gtttcctagattagatctaggtggtgttttgttgtttgttgcttgcacaatacactttgtttggtggttaccactctcctt 189  Q
    | |||||||||  || || ||||||||||||||||||||||| | | |||||| || ||||||||||    ||||||| ||  ||||||| ||| |||||    
T  23200086 ggtttgtgtttttcattttgtttcctagattagatctaggtgttttattgttgattattgcttgcac---tcactttg-ttattggttactactttcctt 23199991  T
Q  190 ggctccacacatcattattttgtattggtgtggtt 224  Q
     |||||||| |||| || |||||||||||||||||    
T  23199990 tgctccacatatca-tactttgtattggtgtggtt 23199957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 801214 - 801435
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa-----------tgtatttgttttcttcttccctctccttgtttatcttgtg-att 88  Q
    |||||||||||||||||||||||||||||||||||||||||||||           ||| |||||||||||||||||||||||  ||||||||||| |||    
T  801214 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtctttgttttcttcttccctctcct--tttatcttgtgtatt 801311  T
Q  89 gtgctttgtgtttcacacttgtttcctagattagatctaggtg--gtgttttgttgtttgttgcttgcacaatacactttgtttggtggttaccactctc 186  Q
    |     ||| |||| ||||||||||||||||||||||||||||  || |||||||| || ||||||||||   |||||||  || |||||||| ||| ||    
T  801312 g-----tgtttttc-cacttgtttcctagattagatctaggtgctgttttttgttgattattgcttgcac---acacttt-attagtggttactactttc 801401  T
Q  187 cttggctccacacatcattattttgtattggtgtg 221  Q
    ||| ||||||||||||| ||||| |||||||||||    
T  801402 ctttgctccacacatca-tatttcgtattggtgtg 801435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 23197985 - 23197823
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa----------tgtatttgttttcttcttccctctccttgtttatcttgtgattgt 90  Q
    |||||||||||||||||||||||||||||||||||||||||||||          ||| ||||||||| ||||| |||||||  ||||||||||| ||||    
T  23197985 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctttggtgtctttgttttcctcttctctctcct--tttatcttgtgcttgt 23197888  T
Q  91 gctttgtgtttcaca-cttgtttcctagattagatctaggtggtgttttgttgtttgttgcttgc 154  Q
    | |||||||||  ||  ||||||||||||||||||||| ||| | | |||||| || ||||||||    
T  23197887 ggtttgtgtttttcattttgtttcctagattagatctatgtgttttattgttgattattgcttgc 23197823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 7762387 - 7762431
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  7762387 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 7762431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 9581404 - 9581448
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  9581404 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 9581448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 19683935 - 19683891
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    ||||||||||||| |||||||||||||||||||||||||||||||    
T  19683935 aatctctcctccatagtaggtcaagtttggaccgaactgggtgaa 19683891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 37408580 - 37408624
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    ||||||||||||||||||||||||||||||| |||||||||||||    
T  37408580 aatctctcctccagagtaggtcaagtttggatcgaactgggtgaa 37408624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 45095285 - 45095329
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    ||||||||||| |||||||||||||||||||||||||||||||||    
T  45095285 aatctctcctctagagtaggtcaagtttggaccgaactgggtgaa 45095329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 5258190 - 5258146
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||    
T  5258190 aatctcttctccagagtaggtcaagtttggaccgaacttggtgaa 5258146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 7764586 - 7764630
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||    
T  7764586 aatctctcctccagagtaggtcaaatttagaccgaactgggtgaa 7764630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 9636172 - 9636128
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||    
T  9636172 aatctctcctccaaagtaggtcaagtttgaaccgaactgggtgaa 9636128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 34491334 - 34491377
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    ||||||||||||||||||||||||| |||||||||||||||||||    
T  34491334 aatctctcctccagagtaggtcaag-ttggaccgaactgggtgaa 34491377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 43401847 - 43401803
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    ||||||||||||||||||||||| | |||||||||||||||||||    
T  43401847 aatctctcctccagagtaggtcatggttggaccgaactgggtgaa 43401803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 43403790 - 43403746
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    ||||||||||||||||||||||| | |||||||||||||||||||    
T  43403790 aatctctcctccagagtaggtcatggttggaccgaactgggtgaa 43403746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 4570074 - 4570115
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggt 42  Q
    ||||||| ||||||||||||| ||||||||||||||||||||    
T  4570074 aatctctactccagagtaggtgaagtttggaccgaactgggt 4570115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 5260369 - 5260325
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    ||||||| ||||| |||||||||||||||||||||||| ||||||    
T  5260369 aatctcttctccaaagtaggtcaagtttggaccgaacttggtgaa 5260325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 6095645 - 6095602
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||    
T  6095645 aatctctcctccagagtaggtcaag-ttggaccgaactgtgtgaa 6095602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 49199515 - 49199471
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    ||||||||||||||| ||||||| | |||||||||||||||||||    
T  49199515 aatctctcctccagactaggtcatggttggaccgaactgggtgaa 49199471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 41819569 - 41819525
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    |||||||||||||||||||||||   ||||||| |||||||||||    
T  41819569 aatctctcctccagagtaggtcattgttggaccaaactgggtgaa 41819525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 54593826 - 54593869
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    |||||||||||||||||| |||||| ||||||| |||||||||||    
T  54593826 aatctctcctccagagtatgtcaag-ttggaccaaactgggtgaa 54593869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 148; Significance: 6e-78; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 2650 - 2409
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa-----------tgtat-ttgttttcttcttccctctccttgtttatcttgtgatt 88  Q
    |||||||||||||||||||||||||||||||||||||||||||||           ||| | |||||||||||||||||||||||||  |||||||||||    
T  2650 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctttttgtgtttattgttttcttcttccctctccttgt--atcttgtgatt 2553  T
Q  89 gt-gctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttgcttgcacaatacactttgtttggtggttaccactctcc 187  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  2552 gttgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaataaactttgtttggtggttaccactctcc 2453  T
Q  188 ttggctccacacatcattat--tttgtattggtgtggttcgatc 229  Q
     | |||||||||||||||||  ||||||||||||||||||||||    
T  2452 gtcgctccacacatcattattctttgtattggtgtggttcgatc 2409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 145; Significance: 4e-76; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 13656078 - 13655834
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa------------tgtat-ttgttttcttcttccctctccttgtttatcttgtgat 87  Q
    ||||||||||||||||||||||||||||||||||||||||||||             ||| | |||||||||||||||||||||||||||||||||||||    
T  13656078 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaccaatctctttggtgtttgttgttttcttcttccctctccttgtttatcttgtgat 13655979  T
Q  88 tgt-gctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttgcttgcacaatacactttgtttggtggttaccactctc 186  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| |||| ||||||||||||||||    
T  13655978 tgttgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaatatactctgttcggtggttaccactctc 13655879  T
Q  187 cttggctccacacatcattat--tttgtattggtgtggttcgatc 229  Q
    | | |||||||||||||||||  ||||||||||||||||||||||    
T  13655878 cgtcgctccacacatcattattctttgtattggtgtggttcgatc 13655834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 12647432 - 12647191
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa-----------tgtat-ttgttttcttcttccctctccttgtttatcttgtgatt 88  Q
    |||||||||||||||||||||||||||||||||||||||||||||           ||| | |||||||||||||||||||||||||  |||||||||||    
T  12647432 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttgtgtttattgttttcttcttccctctccttgt--atcttgtgatt 12647335  T
Q  89 gt-gctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttgcttgcacaatacactttgtttggtggttaccactctcc 187  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| |||||||||||||||||    
T  12647334 gttgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaataaactttgttcggtggttaccactctcc 12647235  T
Q  188 ttggctccacacatcattat--tttgtattggtgtggttcgatc 229  Q
     | |||||||||||||||||  ||||||||||||||||||||||    
T  12647234 gtcgctccacacatcattattctttgtattggtgtggttcgatc 12647191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 6266813 - 6267023
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa-----------tgtattt-gttttcttcttccctctccttgtttatcttgtgatt 88  Q
    |||||||||||||||||||||||||||||||||||||||||||||           ||| ||| |||||||||||||||||||  |||||||||||| ||    
T  6266813 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtcttttgttttcttcttccctctcc--gtttatcttgtgctt 6266910  T
Q  89 gtgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttgcttgcacaatacactttgtttggtggttaccactctcct 188  Q
    |||  ||||||||  ||||| |||||||||||||||||||||| |||||||||| || |||||| |||   |||||||||||||||||||||||||||||    
T  6266911 gtgtattgtgtttttcacttctttcctagattagatctaggtgttgttttgttgatttttgcttacac---acactttgtttggtggttaccactctcct 6267007  T
Q  189 tggctccacacatcat 204  Q
    | ||||||||||||||    
T  6267008 ttgctccacacatcat 6267023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 4484376 - 4484151
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa----------tgtatttgttttcttcttccctctccttgtttatcttgtgattgt 90  Q
    |||||||||||||||||||||||||||||||| ||||||||||||          ||| ||||||||||||||||||||||||  |||||||||| ||||    
T  4484376 aatctctcctccagagtaggtcaagtttggacagaactgggtgaacaatctttggtgtctttgttttcttcttccctctcctt--ttatcttgtgcttgt 4484279  T
Q  91 gctttgtgtttcacactt-gtttcctagattagatctaggtggtgtt-ttgttgtttgttgcttgcacaatacactttgtttggtggttaccactctcct 188  Q
    | ||| || ||  ||||| ||||||||||||||||||||||| |||| |||||| || ||||||||||    ||||||| ||  ||||||| ||| ||||    
T  4484278 ggtttttgcttttcactttgtttcctagattagatctaggtgttgttattgttgattattgcttgcac---tcactttg-ttattggttactactttcct 4484183  T
Q  189 tggctccacacatcattattttgtattggtgtg 221  Q
    | ||||||||||||| ||||| |||||||||||    
T  4484182 ttgctccacacatca-tatttcgtattggtgtg 4484151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 32289686 - 32289916
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa------------tgtatttgttttcttcttccctctccttgtttatcttgtgatt 88  Q
    |||||||||||||||||||||||||||||||||||||||||||||            |||  |||||||| ||||||||||||||  |||||||||| ||    
T  32289686 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttggtgtccttgttttcctcttccctctcctt--ttatcttgtgctt 32289783  T
Q  89 gtgctttgtgtttcacactt-gtttcctagattagatctaggtggtgtt-ttgttgtttgttgcttgcacaatacactttgtttggtggttaccactctc 186  Q
    ||| ||| || ||  ||||| ||||||||||||||||||||||| |||| |||||| || ||||||||||    ||||||| || |||||||| ||| ||    
T  32289784 gtgttttatgcttttcactttgtttcctagattagatctaggtgttgttattgttgattattgcttgcac---ccactttg-ttagtggttactactttc 32289879  T
Q  187 cttggctccacacatcattattttgtattggtgtggtt 224  Q
    ||| |||||||||||| ||| |||||||||||||||||    
T  32289880 ctttgctccacacatc-ttactttgtattggtgtggtt 32289916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 30833468 - 30833633
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa----------tgtatttgttttcttcttccctctccttgtttatcttgtgattgt 90  Q
    |||||||||||||||||||||||||||||||| ||||||||||||          ||| ||||||||| ||||||||||||||  |||||||||| ||||    
T  30833468 aatctctcctccagagtaggtcaagtttggactgaactgggtgaacaatctttggtgtctttgttttcctcttccctctcctt--ttatcttgtgcttgt 30833565  T
Q  91 gctttgtgtttcacactt-gtttcctagattagatctaggtggtgtt-ttgttgtttgttgcttgcac 156  Q
    | |||||| ||  ||||| ||||||||||||||||||||||| |||| |||||| || ||||||||||    
T  30833566 ggtttgtgcttttcactttgtttcctagattagatctaggtgttgttattgttgattattgcttgcac 30833633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 4503179 - 4503017
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa----------tgtatttgttttcttcttccctctccttgtttatcttgtgattgt 90  Q
    |||||||||||||||||||||||||||||||||||||||||||||          ||| |||||||   ||||  |||||||  ||||||||||| ||||    
T  4503179 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctttggtgtgtttgtttctctctt--ctctcct--tttatcttgtgcttgt 4503084  T
Q  91 gctttgtgtttcacac-ttgtttcctagattagatctaggtggtgtt-ttgttgtttgttgcttgca 155  Q
    | |||||| ||  ||| ||||||||||||||||||||||||| |||| |||||| || |||||||||    
T  4503083 gttttgtgcttttcactttgtttcctagattagatctaggtgctgttattgttgattattgcttgca 4503017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 36988122 - 36988078
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  36988122 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 36988078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 45099876 - 45099920
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  45099876 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45099920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 2334464 - 2334424
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactggg 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  2334464 aatctctcctccagagtaggtcaagtttggaccgaactggg 2334424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 6595052 - 6595008
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    ||||||||||||||||||||||||||||||||||||||| |||||    
T  6595052 aatctctcctccagagtaggtcaagtttggaccgaactgagtgaa 6595008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 36205711 - 36205667
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    ||||| |||||||||||||||||||||||||||||||||||||||    
T  36205711 aatctatcctccagagtaggtcaagtttggaccgaactgggtgaa 36205667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 5723302 - 5723258
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    ||||||||||| ||||||||| |||||||||||||||||||||||    
T  5723302 aatctctcctctagagtaggttaagtttggaccgaactgggtgaa 5723258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 45727051 - 45727094
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    ||||||||||||||||||||||||| |||||||||||||||||||    
T  45727051 aatctctcctccagagtaggtcaag-ttggaccgaactgggtgaa 45727094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 35446928 - 35446887
Alignment:
Q  3 tctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  35446928 tctctcctccagagtaggtcaag-ttggaccgaactgggtgaa 35446887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 1631778 - 1631734
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaat 46  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||    
T  1631778 aatctctcctccagagtaggtcaag-ttggaccgaactgagtgaat 1631734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 33648294 - 33648335
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggt 42  Q
    |||||||||||||||||||||||   ||||||||||||||||    
T  33648294 aatctctcctccagagtaggtcattgttggaccgaactgggt 33648335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 139; Significance: 1e-72; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 8395725 - 8395967
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa-----------tgtat-ttgttttcttcttccctctccttgtttatcttgtgatt 88  Q
    |||||||||||||||||||||||||||||||||||||||||||||           ||| | ||||||||||||||||||||| | | ||||||||||||    
T  8395725 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttgtgtttattgttttcttcttccctctccat-tgtatcttgtgatt 8395823  T
Q  89 gt-gctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttgcttgcacaatacactttgtttggtggttaccactctcc 187  Q
    || ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  8395824 gttgctttgtgtttcacacttggttcctagattagatctaggtggtgttttgttgttttttgcttgcacaataaactttgtttggtggttaccactctcc 8395923  T
Q  188 ttggctccacacatcattat--tttgtattggtgtggttcgatc 229  Q
     | |||||||||||||||||  ||||||||||||||||||||||    
T  8395924 gtcgctccacacatcattattctttgtattggtgtggttcgatc 8395967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 8393516 - 8393758
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa-----------tgtat-ttgttttcttcttccctctccttgtttatcttgtgatt 88  Q
    |||||||||||||||||||||||||||||||||||||||||||||           ||| | ||||||||||||||||||||| | | ||||||||||||    
T  8393516 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttgtgtttattgttttcttcttccctctccat-tgtatcttgtgatt 8393614  T
Q  89 gt-gctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttgcttgcacaatacactttgtttggtggttaccactctcc 187  Q
    || ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||||||||||||||    
T  8393615 gttgctttgtgtttcacacttggttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaataaacttcgtttggtggttaccactctcc 8393714  T
Q  188 ttggctccacacatcattat--tttgtattggtgtggttcgatc 229  Q
     | |||||||||||||||||  ||||||||||||||||||||||    
T  8393715 gtcgctccacacatcattattctttgtattggtgtggttcgatc 8393758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 51 - 229
Target Start/End: Original strand, 7122867 - 7123046
Alignment:
Q  51 ttgttttcttcttccctctccttgtttatcttgtgattgt-gctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttg 149  Q
    ||||||||||||||||||  |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||    
T  7122867 ttgttttcttcttccctc--cttgtttatcttgtgattgttgctttgtgtttcacacttggttcctagattagatctaggtggtgttttgttgtttcttg 7122964  T
Q  150 cttgcacaatacactttgtttggtggttaccactctccttggctccacacatcattat--tttgtattggtgtggttcgatc 229  Q
    ||||||||||| |||||||| ||||||||||||||||| | |||||||||||||||||  ||||||||||||||||||||||    
T  7122965 cttgcacaataaactttgttcggtggttaccactctccgtcgctccacacatcattattctttgtattggtgtggttcgatc 7123046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 51 - 229
Target Start/End: Original strand, 7125086 - 7125265
Alignment:
Q  51 ttgttttcttcttccctctccttgtttatcttgtgattgt-gctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttg 149  Q
    ||||||||||||||||||  |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||    
T  7125086 ttgttttcttcttccctc--cttgtttatcttgtgattgttgctttgtgtttcacacttggttcctagattagatctaggtggtgttttgttgtttcttg 7125183  T
Q  150 cttgcacaatacactttgtttggtggttaccactctccttggctccacacatcattat--tttgtattggtgtggttcgatc 229  Q
    ||||||||||| |||||||| ||||||||||||||||| | |||||||||||||||||  ||| ||||||||||||||||||    
T  7125184 cttgcacaataaactttgttcggtggttaccactctccgtcgctccacacatcattattctttatattggtgtggttcgatc 7125265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 4 - 229
Target Start/End: Original strand, 5136190 - 5136429
Alignment:
Q  4 ctctcctccagagtaggtcaagtttggaccgaactgggtgaa-----------tgtat-ttgttttcttcttccctctccttgtttatcttgtgattgtg 91  Q
    |||||||||||||||||||||||||||||||||||||||||            ||| | ||||||||||||||||||||||||||||||||||| || ||    
T  5136190 ctctcctccagagtaggtcaagtttggaccgaactgggtgaccaatctctttgtgtttattgttttcttcttccctctccttgtttatcttgtgttt-tg 5136288  T
Q  92 ctt--tgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttgcttgcacaatacactttgtttggtggttaccactctcctt 189  Q
     ||  | ||||||||||||| |||||||||||||||||| || ||||||||||| | |||||||| |||||  ||||||||||||||||||||||||| |    
T  5136289 gttgctttgtttcacacttggttcctagattagatctag-tgatgttttgttgtctcttgcttgctcaataagctttgtttggtggttaccactctccgt 5136387  T
Q  190 ggctccacacatcattat--tttgtattggtgtggttcgatc 229  Q
     |||||||||||||||||  ||||||||||||||||||||||    
T  5136388 cgctccacacatcattattctttgtattggtgtggttcgatc 5136429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 4 - 229
Target Start/End: Original strand, 5138415 - 5138654
Alignment:
Q  4 ctctcctccagagtaggtcaagtttggaccgaactgggtgaa-----------tgtat-ttgttttcttcttccctctccttgtttatcttgtgattgtg 91  Q
    |||||||||||||||||||||||||||||||||||||||||            ||| | ||||||||||||||||||||||||||||||||||| || ||    
T  5138415 ctctcctccagagtaggtcaagtttggaccgaactgggtgaccaatctctttgtgtttattgttttcttcttccctctccttgtttatcttgtgttt-tg 5138513  T
Q  92 ctt--tgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttgcttgcacaatacactttgtttggtggttaccactctcctt 189  Q
     ||  | ||||||||||||| |||||||||||||||||| || ||||||||||| | |||||||| |||||  ||||||||||||||||||||||||| |    
T  5138514 gttgctttgtttcacacttggttcctagattagatctag-tgatgttttgttgtctcttgcttgctcaataagctttgtttggtggttaccactctccgt 5138612  T
Q  190 ggctccacacatcattat--tttgtattggtgtggttcgatc 229  Q
     |||||||||||||||||  ||||||||||||||||||||||    
T  5138613 cgctccacacatcattattctttgtattggtgtggttcgatc 5138654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 31495362 - 31495130
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa-----------tgtatttgttttcttcttccctctccttgt------ttatcttg 83  Q
    |||||||||||||||||||||||||||||||||||||||||||||           ||| ||||||||| |||||||||||||| |      ||||||||    
T  31495362 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctcttggtgtctttgttttcctcttccctctccttttatccttttatcttg 31495263  T
Q  84 tgattgtgctttgtgtttcacactt-gtttcctagattagatctaggtggtgttttgttgtttgttgcttgcacaatacactttgtttggtggttaccac 182  Q
    || ||||| ||| || ||  ||||| ||||||||||||||||||||||| |||||||||| || |||||||||| | |||||||| ||| ||||||| ||    
T  31495262 tgcttgtgttttatgcttttcactttgtttcctagattagatctaggtgctgttttgttgattattgcttgcac-acacactttg-ttgatggttactac 31495165  T
Q  183 tctccttggctccacacatcattattttgtattggt 218  Q
    | ||||| ||||||||||||| ||||| ||||||||    
T  31495164 tttcctttgctccacacatca-tatttcgtattggt 31495130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 29999852 - 29999808
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  29999852 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 29999808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 56178683 - 56178639
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  56178683 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 56178639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 5370129 - 5370085
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    ||||||||||||||||||||||||||||||||||||||| |||||    
T  5370129 aatctctcctccagagtaggtcaagtttggaccgaactgagtgaa 5370085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 13992339 - 13992295
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    |||||||||||||||||||||||||||||||||||||| ||||||    
T  13992339 aatctctcctccagagtaggtcaagtttggaccgaactaggtgaa 13992295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 48143165 - 48143209
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    ||||||||||||||||||||||||||||||||| |||||||||||    
T  48143165 aatctctcctccagagtaggtcaagtttggaccaaactgggtgaa 48143209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 2209836 - 2209880
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    ||||||||||||||||||||||| | |||||||||||||||||||    
T  2209836 aatctctcctccagagtaggtcatggttggaccgaactgggtgaa 2209880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 52095408 - 52095365
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    |||||||||||||||||||| ||||||||||||||||||||||||    
T  52095408 aatctctcctccagagtagg-caagtttggaccgaactgggtgaa 52095365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 41964538 - 41964580
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtga 44  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    
T  41964538 aatctctcctccagagtaggtcaag-ttggaccgaactgggtga 41964580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 8648261 - 8648304
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||    
T  8648261 aatctctcctccagagtaggtcaag-ttggaccaaactgggtgaa 8648304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 41639548 - 41639591
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||    
T  41639548 aatctctcctccagagtaggtcaag-ttggaccgaactgagtgaa 41639591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 50673893 - 50673850
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    ||||||||||||||||||||||||| |||||||||||| ||||||    
T  50673893 aatctctcctccagagtaggtcaag-ttggaccgaactaggtgaa 50673850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 52082708 - 52082666
Alignment:
Q  3 tctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    |||||||||||||||||||||||||| ||||||  ||||||||    
T  52082708 tctctcctccagagtaggtcaagtttagaccgatttgggtgaa 52082666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 379502 - 379546
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    |||||||||||||||||||||||   |||||||||||||| ||||    
T  379502 aatctctcctccagagtaggtcattgttggaccgaactggatgaa 379546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 6656078 - 6656121
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    |||||||| |||||||||||||||| |||||||||| ||||||||    
T  6656078 aatctctcatccagagtaggtcaag-ttggaccgaattgggtgaa 6656121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 7125024 - 7125068
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    |||||||||||||||||||||||||    ||||||||||||||||    
T  7125024 aatctctcctccagagtaggtcaagcaaagaccgaactgggtgaa 7125068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 46703623 - 46703667
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    |||||||||||||||||||||||   |||||||||| ||||||||    
T  46703623 aatctctcctccagagtaggtcattgttggaccgaattgggtgaa 46703667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 50262747 - 50262703
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    ||||| |||||||||||||||||   |||||||||||||||||||    
T  50262747 aatctttcctccagagtaggtcattgttggaccgaactgggtgaa 50262703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 132; Significance: 2e-68; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 4 - 229
Target Start/End: Original strand, 6398 - 6638
Alignment:
Q  4 ctctcctccagagtaggtcaagtttggaccgaactgggtgaa-----------tgtatttgttttcttcttccctctccttgttt-atcttgtgattgt- 90  Q
    |||||||||||||||||| ||||||||||||||||||||||            |||  ||||||||||||||||||||||||||| |||||||||||||     
T  6398 ctctcctccagagtaggttaagtttggaccgaactgggtgaccaatctctttgtgttattgttttcttcttccctctccttgttttatcttgtgattgtt 6497  T
Q  91 gctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttgcttgcacaatacactttgtttggtggttaccactctccttg 190  Q
    |||||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||||||||||| |     
T  6498 gctttgtgtttcacacttgtttcctagattggatctaggtggtgtattgttgtttcttgcttgcacaataaactttgtttggtggttaccactctccgtc 6597  T
Q  191 gctccacacatcattat--tttgtattggtgtggttcgatc 229  Q
    |||||||| ||||||||  ||||||||||||||||||||||    
T  6598 gctccacatatcattattctttgtattggtgtggttcgatc 6638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 129; Significance: 1e-66; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 1 - 254
Target Start/End: Original strand, 3439625 - 3439886
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa------------tgtatttgttttcttcttccctctccttgtttatcttgtgatt 88  Q
    |||||||||||||||||||||||||||||||||||||||| ||||            ||  ||||||||||||||||||||||||  |||||||||||||    
T  3439625 aatctctcctccagagtaggtcaagtttggaccgaactggatgaacaatctctttggtgcttttgttttcttcttccctctcctt--ttatcttgtgatt 3439722  T
Q  89 gtgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttgcttgcacaatacactttgtttggtggttaccactctcct 188  Q
    ||| |||| ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||   ||||||||||||||||||||| ||||||     
T  3439723 gtgttttgagtttctcacttgtttcctagattagatctaggtggtgttttgttgattgttgcttgcac---acactttgtttggtggttaccgctctccg 3439819  T
Q  189 tggctccacacatcattatttt-gtattggtgtggttcgatcttgtgggggatcggaattcacaaca 254  Q
    | ||||||||||||||| |||| ||||||||||||||||||||    || |||||||||||||||||    
T  3439820 tcgctccacacatcatttttttagtattggtgtggttcgatctaagtggtgatcggaattcacaaca 3439886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 4 - 232
Target Start/End: Original strand, 25690079 - 25690316
Alignment:
Q  4 ctctcctccagagtaggtcaagtttggaccgaactgggtgaa------------tgtat-ttgttttcttcttccctctccttgtttatcttgtgattgt 90  Q
    ||||||||||||||||||||||||||||||||||||||||||            ||| | |||||||||||||||||| ||||  ||||||||||| |||    
T  25690079 ctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctctttggtgtttgttgttttcttcttccctcccctt--ttatcttgtgagtgt 25690176  T
Q  91 gctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttgcttgcacaatacactttgtttggtggttaccactctccttg 190  Q
    | |||||||||| ||||||||||||||||||||||||||||||||||||||| || |||||||||| | ||||||||||||||||||||||||||||||     
T  25690177 gttttgtgtttctcacttgtttcctagattagatctaggtggtgttttgttgattcttgcttgcac-acacactttgtttggtggttaccactctccttt 25690275  T
Q  191 gctccacacatcattattttgtattggtgtggttcgatcttg 232  Q
    |||||||||||||||  |||||||||||||||||||||||||    
T  25690276 gctccacacatcatt-ctttgtattggtgtggttcgatcttg 25690316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 4 - 229
Target Start/End: Original strand, 15290649 - 15290887
Alignment:
Q  4 ctctcctccagagtaggtcaagtttggaccgaactgggtg---aatgtatttgt---------tttcttcttccctctccttgtttatcttgtgattgt- 90  Q
    ||||||||||||||||||||||||||||||||||||||||   ||| | |||||         |||||||||||||||||||||  |||||||||||||     
T  15290649 ctctcctccagagtaggtcaagtttggaccgaactgggtgtccaatctctttgtgtttattgttttcttcttccctctccttgt--atcttgtgattgtt 15290746  T
Q  91 gctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttgcttgcacaatacactttgtttggtggttaccactctccttg 190  Q
    ||||||||||||||||||| |||||||||| |||||||||||||| ||||||||| |||||||| |||||  ||||||| ||||||||||||||||| |     
T  15290747 gctttgtgtttcacacttggttcctagattcgatctaggtggtgtattgttgtttcttgcttgctcaataagctttgttaggtggttaccactctccgtc 15290846  T
Q  191 gctccacacatcattat--tttgtattggtgtggttcgatc 229  Q
    |||||||||||||||||  ||||||||||||||||||||||    
T  15290847 gctccacacatcattattctttgtattggtgtggttcgatc 15290887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 4 - 229
Target Start/End: Original strand, 15471018 - 15471256
Alignment:
Q  4 ctctcctccagagtaggtcaagtttggaccgaactgggtg---aatgtatttgt---------tttcttcttccctctccttgtttatcttgtgattgt- 90  Q
    ||||||||||||||||||||||||||||||||||||||||   ||| | |||||         |||||||||||||||||||||  |||||||||||||     
T  15471018 ctctcctccagagtaggtcaagtttggaccgaactgggtgtccaatctctttgtgtttattgttttcttcttccctctccttgt--atcttgtgattgtt 15471115  T
Q  91 gctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttgcttgcacaatacactttgtttggtggttaccactctccttg 190  Q
    ||||||||||||||||||| |||||||||| |||||||||||||| ||||||||| |||||||| |||||  ||||||| ||||||||||||||||| |     
T  15471116 gctttgtgtttcacacttggttcctagattcgatctaggtggtgtattgttgtttcttgcttgctcaataagctttgttaggtggttaccactctccgtc 15471215  T
Q  191 gctccacacatcattat--tttgtattggtgtggttcgatc 229  Q
    |||||||||||||||||  ||||||||||||||||||||||    
T  15471216 gctccacacatcattattctttgtattggtgtggttcgatc 15471256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 4 - 229
Target Start/End: Complemental strand, 42575367 - 42575130
Alignment:
Q  4 ctctcctccagagtaggtcaagtttggaccgaactgggtgaa-----------tgtat-ttgttttcttcttccctctccttgtttatcttgtgattg-- 89  Q
    |||||||||||||||||||||||||||||||||||||||||            ||| | |||||||||||||||||||||||||  |||||||| |||      
T  42575367 ctctcctccagagtaggtcaagtttggaccgaactgggtgaccaatctctttgtgtttattgttttcttcttccctctccttgt--atcttgtgtttggt 42575270  T
Q  90 tgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttgcttgcacaatacactttgtttggtggttaccactctcctt 189  Q
    ||||||||  ||||||||||||||||||||| |||||||||||||||||||||||| |||||||| |||||  ||||||||||||||||||||||||| |    
T  42575269 tgctttgt--ttcacacttgtttcctagattggatctaggtggtgttttgttgtttcttgcttgctcaataagctttgtttggtggttaccactctccgt 42575172  T
Q  190 ggctccacacatcattat--tttgtattggtgtggttcgatc 229  Q
     |||||||||||||||||  ||||||||||||||||||||||    
T  42575171 cgctccacacatcattatagtttgtattggtgtggttcgatc 42575130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 2627858 - 2628087
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaat-----------gtatttgttttcttcttccctctccttgtttatcttgtgattg 89  Q
    ||||||||||||||||||||||||||||||||||||||||||||||           || ||||||||| ||||||||||||||  |||||||||| |||    
T  2627858 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaataatctcttggtgtctttgttttcctcttccctctcctt--ttatcttgtgcttg 2627955  T
Q  90 tgctttgtgtttcacacttgtttcctagattagatctaggtggtgtt-ttgttg-tttgttgcttgcacaatacactttgtttggtggttaccactctcc 187  Q
    || ||| || ||  |||||||||||||||||||||||||||| |||| |||||| ||| ||||||||||    ||||||| || |||||||| ||| |||    
T  2627956 tgttttatgcttttcacttgtttcctagattagatctaggtgttgttattgttgattttttgcttgcac---ccactttg-ttagtggttactactttcc 2628051  T
Q  188 ttggctccacacatcattattttgtattggtgtggtt 224  Q
    || |||||||||||| ||| |||||||||||||||||    
T  2628052 tttgctccacacatc-ttactttgtattggtgtggtt 2628087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 17982775 - 17982819
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  17982775 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 17982819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 31218379 - 31218423
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  31218379 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 31218423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 42498316 - 42498360
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  42498316 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 42498360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 1746265 - 1746221
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    ||||||||||||| |||||||||||||||||||||||||||||||    
T  1746265 aatctctcctccatagtaggtcaagtttggaccgaactgggtgaa 1746221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 34254377 - 34254333
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    ||||||||||| |||||||||||||||||||||||||||||||||    
T  34254377 aatctctcctctagagtaggtcaagtttggaccgaactgggtgaa 34254333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 34256553 - 34256509
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    ||||||||||| |||||||||||||||||||||||||||||||||    
T  34256553 aatctctcctctagagtaggtcaagtttggaccgaactgggtgaa 34256509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 19945405 - 19945361
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    ||||||||||| ||||||||||||||||| |||||||||||||||    
T  19945405 aatctctcctcgagagtaggtcaagtttgaaccgaactgggtgaa 19945361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 42435037 - 42434994
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    ||||||||||||||||||||||||| |||||||||||||||||||    
T  42435037 aatctctcctccagagtaggtcaag-ttggaccgaactgggtgaa 42434994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 44303977 - 44304021
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||    
T  44303977 aatctctcctccagagtaggtcaagtttggatcgaactaggtgaa 44304021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 18655522 - 18655565
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||    
T  18655522 aatctctcctccaaagtaggtcaag-ttggaccgaactgggtgaa 18655565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 45
Target Start/End: Original strand, 11384108 - 11384150
Alignment:
Q  2 atctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    |||||||||||||||||||| ||| |||||||||||||||||||    
T  11384108 atctctcctccagagtaggttaag-ttggaccgaactgggtgaa 11384150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 75 - 155
Target Start/End: Original strand, 31218459 - 31218541
Alignment:
Q  75 tttatcttgtgattgtgctttgtgtttcacactt-gtttcctagattagatctaggtggtgtt-ttgttgtttgttgcttgca 155  Q
    ||||||||||| || || |||||| ||  ||||| ||||||||||||||||||||||| |||| |||||| || |||||||||    
T  31218459 tttatcttgtgcttatgttttgtgcttttcactttgtttcctagattagatctaggtgctgttattgttgattattgcttgca 31218541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 43036545 - 43036585
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggt 42  Q
    ||||||||||||||| ||||||||| ||||||||||||||||    
T  43036545 aatctctcctccagattaggtcaag-ttggaccgaactgggt 43036585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 173 - 221
Target Start/End: Complemental strand, 3303541 - 3303494
Alignment:
Q  173 tggttaccactctccttggctccacacatcattattttgtattggtgtg 221  Q
    ||||||||||| ||||| ||||||||||||| || ||||||||||||||    
T  3303541 tggttaccactttcctttgctccacacatca-tagtttgtattggtgtg 3303494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 4283646 - 4283689
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    |||||| |||| ||||||||||||| |||||||||||||||||||    
T  4283646 aatctcccctctagagtaggtcaag-ttggaccgaactgggtgaa 4283689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 173 - 221
Target Start/End: Original strand, 43036720 - 43036767
Alignment:
Q  173 tggttaccactctccttggctccacacatcattattttgtattggtgtg 221  Q
    ||||||| ||| ||||| ||||||||||||||| |||||||||||||||    
T  43036720 tggttactactttcctttgctccacacatcatt-ttttgtattggtgtg 43036767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 128; Significance: 5e-66; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 3772 - 3554
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa-----------tgtat-ttgttttcttcttccctctccttgtttatcttgtgatt 88  Q
    ||||||||||||||||||||||||||||||||||||||||||||            ||| | |||||||||||||||||||||||||  |||||||||||    
T  3772 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaccaatctctttgtgtttattgttttcttcttccctctccttgt--atcttgtgatt 3675  T
Q  89 gt-gctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttgcttgcacaatacactttgtttggtggttaccactctcc 187  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| |||||||||||||||||    
T  3674 gttgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttgcttgcacaataaactttgttcggtggttaccactctcc 3575  T
Q  188 ttggctccacacatcattatt 208  Q
     | ||||||||||||||||||    
T  3574 gtcgctccacacatcattatt 3554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1808 (Bit Score: 120; Significance: 3e-61; HSPs: 2)
Name: scaffold1808
Description:

Target: scaffold1808; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 51 - 208
Target Start/End: Original strand, 49 - 205
Alignment:
Q  51 ttgttttcttcttccctctccttgtttatcttgtgattgt-gctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttgttg 149  Q
    |||||||||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  49 ttgttttcttcttccctctccttgt--atcttgtgattgttgctttgtgtttcacacttgtttcctagattagatctaggtggtgttttgttgtttcttg 146  T
Q  150 cttgcacaatacactttgtttggtggttaccactctccttggctccacacatcattatt 208  Q
    ||||||||||| |||||||| ||||||||||||||||| | ||||||||||||||||||    
T  147 cttgcacaataaactttgttaggtggttaccactctccgtcgctccacacatcattatt 205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1808; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 44
Target Start/End: Original strand, 1 - 30
Alignment:
Q  15 agtaggtcaagtttggaccgaactgggtga 44  Q
    ||||||||||||||||||||||||||||||    
T  1 agtaggtcaagtttggaccgaactgggtga 30  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 70; Significance: 2e-31; HSPs: 2)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 11207 - 11042
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa----------tgtatttgttttcttcttccctctccttgtttatcttgtgattgt 90  Q
    |||||||||||||||||||||||||||||||||||||||||||||          ||| ||||||||| ||||||||||||||  |||||||||| ||||    
T  11207 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctttggtgtctttgttttcctcttccctctcctt--ttatcttgtgcttgt 11110  T
Q  91 gctttgtgtttcacactt-gtttcctagattagatctaggtggtgtt-ttgttgtttgttgcttgcac 156  Q
    | |||||||||  ||||| ||||||||||||||||||||||| |||| |||||| || ||||||||||    
T  11109 ggtttgtgtttttcactttgtttcctagattagatctaggtgttgttattgttgattattgcttgcac 11042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 8781 - 8616
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa----------tgtatttgttttcttcttccctctccttgtttatcttgtgattgt 90  Q
    |||||||||||||||||||||||||||||||||||||||||||||          ||| ||||||||| |||||||||| ||  ||||||||||| ||||    
T  8781 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaacaatctttggtgtctttgttttcctcttccctcttct--tttatcttgtgcttgt 8684  T
Q  91 gctttgtgtttcacac-ttgtttcctagattagatctaggtggtgtt-ttgttgtttgttgcttgcac 156  Q
    | |||||| ||  ||| ||||||||||||||||||||||||| |||| |||||| || ||||||||||    
T  8683 ggtttgtgcttttcactttgtttcctagattagatctaggtgttgttattgttgattattgcttgcac 8616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1519 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 1037 - 1081
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  1037 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 1081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 11679 - 11723
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  11679 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 11723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 111 - 221
Target Start/End: Original strand, 11804 - 11911
Alignment:
Q  111 ttcctagattag-atctaggtggtgtt-ttgttgtttgttgcttgcacaatacactttgtttggtggttaccactctccttggctccacacatcattatt 208  Q
    |||||||||||| ||||||||| |||| |||||| || |||||||||||   ||||||||| | ||||||| ||| ||||| ||||||||||||| || |    
T  11804 ttcctagattagtatctaggtgctgttattgttgattattgcttgcaca---cactttgttag-tggttactactttcctttgctccacacatca-tagt 11898  T
Q  209 ttgtattggtgtg 221  Q
    | |||||||||||    
T  11899 tcgtattggtgtg 11911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 434655 - 434699
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  434655 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 434699  T

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Target: scaffold0176 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 18050 - 18006
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    |||||||||||||| |||||||||||||||| |||||||||||||    
T  18050 aatctctcctccagggtaggtcaagtttggatcgaactgggtgaa 18006  T

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Target: scaffold0236 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 10611 - 10651
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggt 42  Q
    ||||||||||||||||||||||||| ||||||||||||||||    
T  10611 aatctctcctccagagtaggtcaag-ttggaccgaactgggt 10651  T

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Target: scaffold0016 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 114724 - 114768
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    ||||||||||||||||||||| |||||| ||||||||||| ||||    
T  114724 aatctctcctccagagtaggttaagtttagaccgaactggatgaa 114768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0466 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 7449 - 7492
Alignment:
Q  1 aatctctcctccagagtaggtcaagtttggaccgaactgggtgaa 45  Q
    ||||||||||| ||||||||| ||| |||||||||||||||||||    
T  7449 aatctctcctctagagtaggttaag-ttggaccgaactgggtgaa 7492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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