View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10102_high_12 (Length: 253)
Name: NF10102_high_12
Description: NF10102
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10102_high_12 |
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Alignment Details
Target: chr2 (Bit Score: 171; Significance: 6e-92; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 15 - 236
Target Start/End: Original strand, 3486382 - 3486602
Alignment:
| Q |
15 |
atgaatgacgcttttaacctcaacaataatttaataaaatctggcactatctgtggatgatgtacggtggttttcaaagttgctgagtcggatcatggtc |
114 |
Q |
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| T |
3486382 |
atgaatgacgtttttaacctcaacaataatttaataaaatctggcactatctgtggatgatgtacggtggttttcaaagttgctgagtcggatcatggtc |
3486481 |
T |
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| Q |
115 |
atatctaatatggataagannnnnnnnnnnnnnatattcctgtatccaaaaaataaatacttttaattcccccaaattccaattacgcgtctacactaat |
214 |
Q |
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| T |
3486482 |
atatctaatatggataaga-tttttccttttttatattcctgtatccaaaaaataaatacttttaattcccccaaattccaattacgcgtctacactaat |
3486580 |
T |
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| Q |
215 |
tactaccatttcatcataacac |
236 |
Q |
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|||||||||||||||||||||| |
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| T |
3486581 |
tactaccatttcatcataacac |
3486602 |
T |
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