View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10102_high_8 (Length: 308)
Name: NF10102_high_8
Description: NF10102
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10102_high_8 |
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Alignment Details
Target: chr5 (Bit Score: 256; Significance: 1e-142; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 13 - 288
Target Start/End: Complemental strand, 8585660 - 8585385
Alignment:
| Q |
13 |
agagaagaaagtggtacattgatcatgggacgtgcagagatcgacactggagcaccattcaagtctgttaaagaagctgttcttttgtttggagaaagag |
112 |
Q |
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| T |
8585660 |
agagaagaaagtggtacattgatcatgggacgtgcagagattgacactggagcaccattcaagtctgttaaagaagctgttcttttgtttggagaaagag |
8585561 |
T |
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| Q |
113 |
tcttagttggagaaatttatgccaacaagctcaaagaggttctcatttttctctttctattcatgcctccattcatcaagttatattgttattgatatgt |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
8585560 |
tcttagttggagaaatttatgccaacaagctcaaagaggttctcatttttctctttctattcatgcctccattcatcaagttatattgttattgttatgt |
8585461 |
T |
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| Q |
213 |
aaccaagtgtatgtttggattcacggtgatattgacagaatcaaagcgacacattataattttacactttagagct |
288 |
Q |
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||| |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| |
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| T |
8585460 |
aacgaagtgtatgtttggattcacggtgatattgacagaatcaaagtgacacatcataattttacactttagagct |
8585385 |
T |
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