View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10102_low_20 (Length: 267)
Name: NF10102_low_20
Description: NF10102
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10102_low_20 |
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Alignment Details
Target: chr3 (Bit Score: 252; Significance: 1e-140; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 1 - 260
Target Start/End: Complemental strand, 49840816 - 49840557
Alignment:
| Q |
1 |
ttttcctctctaattcactaatctcagattgaagttgcgaatgcttaaaatcgcggttcaacagaaactgattttccttcttttcaagatcctgaactaa |
100 |
Q |
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| T |
49840816 |
ttttcctctctaattcactaatctcagattgaagttgcgaatgcttaaaatcgcggttcaacagaaactgattttccttcttttcaagatcctgaactaa |
49840717 |
T |
|
| Q |
101 |
aagtggatatcgtaagcaacacattatactcaattttaaatttaatgcgattaatagctaacaaaaaattgataattcaccttcaaagacttgattgaag |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
49840716 |
aagtggatatcgtaagcaacacattatactcaattttaaatttaatgcgattaatagctaacaaaaaattgataattcaccttcaaagacttgattgaag |
49840617 |
T |
|
| Q |
201 |
tgtacaacttgtgcatagcagaatcaacaccttccttattaattcttgctcttaattcat |
260 |
Q |
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||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
49840616 |
tgtacaacttgtgcacagcagaatcaacaccttccttattgattcttgctcttaattcat |
49840557 |
T |
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