View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10102_low_3 (Length: 526)
Name: NF10102_low_3
Description: NF10102
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10102_low_3 |
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Alignment Details
Target: chr7 (Bit Score: 498; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 498; E-Value: 0
Query Start/End: Original strand, 1 - 510
Target Start/End: Complemental strand, 34078078 - 34077569
Alignment:
| Q |
1 |
gaagtagaaaaaagagttgatgactttcactccaaaattcttgaagaacatagaaaggcaaggaaagataagaaagggataggaaaaagtgatgaagaac |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34078078 |
gaagtagaaaaaagagttgatgactttcactccaaaattcttgaagaacatagaaaggcaaggaaagataagaaagggataggaaaaagtgatgaagaac |
34077979 |
T |
|
| Q |
101 |
ttgattttgtggatattttattgtctttgcctggtgaagatggaaaagagcatatggatgatgttgagataaaagctttgattcaggtatgactttttct |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34077978 |
ttgattttgtggatattttattgtctttgcctggtgaagatggaaaagagcatatggatgatgttgagataaaagctttgattcaggtatgactttttct |
34077879 |
T |
|
| Q |
201 |
ctattaattttgtttaatttttcatgtaatgattgaaaataatgtagttatactaaatatttaggacatgatcgcggctgcaacggacacttcagccgtt |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
34077878 |
ctattaattttgtttaatttttcatgtaatgattgaaaataatgtagttatactaaatatttaggacatgatcgcggctgcaacagacacttcagccgtt |
34077779 |
T |
|
| Q |
301 |
actaatgaatgggcgatgacagaggtaatcaaacatccacacgtccttcacaaaatccaagaagagcttgatgtagtggttggccctaatagaatggtga |
400 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34077778 |
actaatgaatgggcgatgacagaggtaatcaaacatccacacgttcttcacaaaatccaagaagagcttgatgtagtggttggccctaatagaatggtga |
34077679 |
T |
|
| Q |
401 |
ttgaatctgatttgcctaaccttaattacctacgatgtgttgtacgtgaaactttccgcatgcacccagcagggccattcctcattccacatgaatctct |
500 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
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| T |
34077678 |
ttgaatctgatttgcctaaccttaattacctacgatgtgttgtacgtgaaactttccgcatgcatccagcagggccattcctcattccacatgaatctct |
34077579 |
T |
|
| Q |
501 |
tcgacctact |
510 |
Q |
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| T |
34077578 |
tcgacctact |
34077569 |
T |
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