View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10103_high_12 (Length: 339)
Name: NF10103_high_12
Description: NF10103
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10103_high_12 |
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Alignment Details
Target: chr7 (Bit Score: 67; Significance: 1e-29; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 17 - 91
Target Start/End: Complemental strand, 1702258 - 1702185
Alignment:
| Q |
17 |
acaaaaacctaaacaaatcatcatatatataaacaaaccttccctcacttttttcaatcctctttatcactcaca |
91 |
Q |
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| T |
1702258 |
acaaaaacctaaacaaatcat-atatatataaacaaaccttccctcacttttttcaatcctctttatcactcaca |
1702185 |
T |
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Target: chr7; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 270 - 329
Target Start/End: Complemental strand, 1702008 - 1701949
Alignment:
| Q |
270 |
gtttcttgaccaacaagaaaccgattttttctcaatgctgcaactcaacagcacttcttc |
329 |
Q |
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| T |
1702008 |
gtttcttgaccaacaagaaaccgattttttctcaatgctgcaactcaacagcacttcttc |
1701949 |
T |
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