View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10103_high_15 (Length: 329)
Name: NF10103_high_15
Description: NF10103
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10103_high_15 |
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Alignment Details
Target: chr1 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 318
Target Start/End: Original strand, 14929845 - 14930148
Alignment:
| Q |
1 |
tggtcactaacaatggcaactaatatcgacannnnnnnatatcaatctctgaatcgatcacaaactcgttttaacttctgatttgaaaatcagtagcaaa |
100 |
Q |
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| T |
14929845 |
tggtcgctaacaatagcaactaatatcgacatttttt-atatcaatctctgaatcgatcacaaactcgttttaacttctgatttgaaaatcagtagcaaa |
14929943 |
T |
|
| Q |
101 |
atcggttgctagagggaccaatatattttgtcgctaaataacaagttttagtagttttcaaaattataaagcacaaaacattatggtccgtttactttgt |
200 |
Q |
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|||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| |||||| | ||||||||| |||||||||||||| |
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| T |
14929944 |
atcggttgctagagggaccaatatattttgtcactaaattacaagttttagtagttttcaa------aaagcatacaacattatgttccgtttactttgt |
14930037 |
T |
|
| Q |
201 |
gaaaacattttcattaagtaaatacatagcttcttggtttttcccgtctctaatttccgttgttaattcaacaggttagcatcgaagtgtttaggaagaa |
300 |
Q |
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||||||||||||| |||| ||||| ||| |||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
14930038 |
gaaaacattttcactaagcaaata-------gcttagttttttctgtctctaatttccgttgttaattcaacaggttagcatcgaagtgtttaggaagaa |
14930130 |
T |
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| Q |
301 |
gcatgtgttggtattcat |
318 |
Q |
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|||||| ||||||||||| |
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| T |
14930131 |
gcatgtattggtattcat |
14930148 |
T |
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